; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg027766 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg027766
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionSplicing factor U2AF-associated protein 2
Genome locationscaffold7:32529427..32532745
RNA-Seq ExpressionSpg027766
SyntenySpg027766
Gene Ontology termsGO:0000398 - mRNA splicing, via spliceosome (biological process)
GO:0003723 - RNA binding (molecular function)
InterPro domainsIPR025640 - GYF domain 2


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0041290.1 splicing factor U2AF-associated protein 2 [Cucumis melo var. makuwa]9.2e-7885.8Show/hide
Query:  IFYS---FVVTGMDNSSVGNSGMVTEAGWYILGEDQQHVGPYAFSELREHFLNGYLLESTLAWSEGQSEWQPLSSIPGLTTEVFQRESDSSTAVPVNNND
        ++YS   F V GMDN+SVGNS MVTEAGWYILGE+QQHVGPYAFSELREHFLNGYLLESTLAWSEGQSEWQPLSSIPGLTT+V++++S+ STAVP NNN+
Subjt:  IFYS---FVVTGMDNSSVGNSGMVTEAGWYILGEDQQHVGPYAFSELREHFLNGYLLESTLAWSEGQSEWQPLSSIPGLTTEVFQRESDSSTAVPVNNND

Query:  DDELEKYQKEVGEVEATAEVSSPSGSRNFGIVEGDLDRPTTPPEGEEEFTDDDGTTYKWDRALRAWVPQ
        DDELEKYQKEVGE EATAEVS PSGSRNFG+VEGDL+RPTTPPEGEEEFTDDDGTTYKWDR LRAWVPQ
Subjt:  DDELEKYQKEVGEVEATAEVSSPSGSRNFGIVEGDLDRPTTPPEGEEEFTDDDGTTYKWDRALRAWVPQ

TYK02750.1 splicing factor U2AF-associated protein 2 [Cucumis melo var. makuwa]9.2e-7885.8Show/hide
Query:  IFYS---FVVTGMDNSSVGNSGMVTEAGWYILGEDQQHVGPYAFSELREHFLNGYLLESTLAWSEGQSEWQPLSSIPGLTTEVFQRESDSSTAVPVNNND
        ++YS   F V GMDN+SVGNS MVTEAGWYILGE+QQHVGPYAFSELREHFLNGYLLESTLAWSEGQSEWQPLSSIPGLTT+V++++S+ STAVP NNN+
Subjt:  IFYS---FVVTGMDNSSVGNSGMVTEAGWYILGEDQQHVGPYAFSELREHFLNGYLLESTLAWSEGQSEWQPLSSIPGLTTEVFQRESDSSTAVPVNNND

Query:  DDELEKYQKEVGEVEATAEVSSPSGSRNFGIVEGDLDRPTTPPEGEEEFTDDDGTTYKWDRALRAWVPQ
        DDELEKYQKEVGE EATAEVS PSGSRNFG+VEGDL+RPTTPPEGEEEFTDDDGTTYKWDR LRAWVPQ
Subjt:  DDELEKYQKEVGEVEATAEVSSPSGSRNFGIVEGDLDRPTTPPEGEEEFTDDDGTTYKWDRALRAWVPQ

XP_008442163.1 PREDICTED: splicing factor U2AF-associated protein 2 [Cucumis melo]3.0e-7689.17Show/hide
Query:  MDNSSVGNSGMVTEAGWYILGEDQQHVGPYAFSELREHFLNGYLLESTLAWSEGQSEWQPLSSIPGLTTEVFQRESDSSTAVPVNNNDDDELEKYQKEVG
        MDN+SVGNS MVTEAGWYILGE+QQHVGPYAFSELREHFLNGYLLESTLAWSEGQSEWQPLSSIPGLTT+V++++S+ STAVP NNN+DDELEKYQKEVG
Subjt:  MDNSSVGNSGMVTEAGWYILGEDQQHVGPYAFSELREHFLNGYLLESTLAWSEGQSEWQPLSSIPGLTTEVFQRESDSSTAVPVNNNDDDELEKYQKEVG

Query:  EVEATAEVSSPSGSRNFGIVEGDLDRPTTPPEGEEEFTDDDGTTYKWDRALRAWVPQ
        E EATAEVS PSGSRNFG+VEGDL+RPTTPPEGEEEFTDDDGTTYKWDR LRAWVPQ
Subjt:  EVEATAEVSSPSGSRNFGIVEGDLDRPTTPPEGEEEFTDDDGTTYKWDRALRAWVPQ

XP_038882575.1 splicing factor U2AF-associated protein 2 isoform X3 [Benincasa hispida]4.3e-7589.31Show/hide
Query:  GMDNSSVGNSGMVTEAGWYILGEDQQHVGPYAFSELREHFLNGYLLESTLAWSEGQSEWQPLSSIPGLTTEVFQRESDSSTAVPV-NNNDDDELEKYQKE
        GMDN+SVGNS MVTEAGWYILGE+QQHVGPYAFSELREHFLNGYLLESTLAWSEGQSEWQPLSSIPGLT +V++++S  STAV   NNNDDDELEKYQKE
Subjt:  GMDNSSVGNSGMVTEAGWYILGEDQQHVGPYAFSELREHFLNGYLLESTLAWSEGQSEWQPLSSIPGLTTEVFQRESDSSTAVPV-NNNDDDELEKYQKE

Query:  VGEVEATAEVSSPSGSRNFGIVEGDLDRPTTPPEGEEEFTDDDGTTYKWDRALRAWVPQ
        VGE EAT EVSSPSGSRNFG+VEGDLDRPTTPPEGEEEFTDDDGTTYKWDRALRAWVPQ
Subjt:  VGEVEATAEVSSPSGSRNFGIVEGDLDRPTTPPEGEEEFTDDDGTTYKWDRALRAWVPQ

XP_038882576.1 splicing factor U2AF-associated protein 2 isoform X4 [Benincasa hispida]1.6e-7489.24Show/hide
Query:  MDNSSVGNSGMVTEAGWYILGEDQQHVGPYAFSELREHFLNGYLLESTLAWSEGQSEWQPLSSIPGLTTEVFQRESDSSTAVPV-NNNDDDELEKYQKEV
        MDN+SVGNS MVTEAGWYILGE+QQHVGPYAFSELREHFLNGYLLESTLAWSEGQSEWQPLSSIPGLT +V++++S  STAV   NNNDDDELEKYQKEV
Subjt:  MDNSSVGNSGMVTEAGWYILGEDQQHVGPYAFSELREHFLNGYLLESTLAWSEGQSEWQPLSSIPGLTTEVFQRESDSSTAVPV-NNNDDDELEKYQKEV

Query:  GEVEATAEVSSPSGSRNFGIVEGDLDRPTTPPEGEEEFTDDDGTTYKWDRALRAWVPQ
        GE EAT EVSSPSGSRNFG+VEGDLDRPTTPPEGEEEFTDDDGTTYKWDRALRAWVPQ
Subjt:  GEVEATAEVSSPSGSRNFGIVEGDLDRPTTPPEGEEEFTDDDGTTYKWDRALRAWVPQ

TrEMBL top hitse value%identityAlignment
A0A0A0KZ32 Uncharacterized protein2.3e-7486.71Show/hide
Query:  GMDNSSVGNSGMVTEAGWYILGEDQQHVGPYAFSELREHFLNGYLLESTLAWSEGQSEWQPLSSIPGLTTEVFQRESDSSTAVPVNNNDDDELEKYQKEV
        GMDN+SVGN  MVTEAGWYILGE+QQHVGPYAFSELREHFLNGYLLESTLAWSEGQSEWQPLSSIPGLTTEV+ ++S+  T VP NNNDDDELEKYQKEV
Subjt:  GMDNSSVGNSGMVTEAGWYILGEDQQHVGPYAFSELREHFLNGYLLESTLAWSEGQSEWQPLSSIPGLTTEVFQRESDSSTAVPVNNNDDDELEKYQKEV

Query:  GEVEATAEVSSPSGSRNFGIVEGDLDRPTTPPEGEEEFTDDDGTTYKWDRALRAWVPQ
        GE EAT +VSSPSG RNFG+VEGDL+RPTTPPEGEEEFTDDDGT YKWDR LRAWVPQ
Subjt:  GEVEATAEVSSPSGSRNFGIVEGDLDRPTTPPEGEEEFTDDDGTTYKWDRALRAWVPQ

A0A1S3B523 splicing factor U2AF-associated protein 21.4e-7689.17Show/hide
Query:  MDNSSVGNSGMVTEAGWYILGEDQQHVGPYAFSELREHFLNGYLLESTLAWSEGQSEWQPLSSIPGLTTEVFQRESDSSTAVPVNNNDDDELEKYQKEVG
        MDN+SVGNS MVTEAGWYILGE+QQHVGPYAFSELREHFLNGYLLESTLAWSEGQSEWQPLSSIPGLTT+V++++S+ STAVP NNN+DDELEKYQKEVG
Subjt:  MDNSSVGNSGMVTEAGWYILGEDQQHVGPYAFSELREHFLNGYLLESTLAWSEGQSEWQPLSSIPGLTTEVFQRESDSSTAVPVNNNDDDELEKYQKEVG

Query:  EVEATAEVSSPSGSRNFGIVEGDLDRPTTPPEGEEEFTDDDGTTYKWDRALRAWVPQ
        E EATAEVS PSGSRNFG+VEGDL+RPTTPPEGEEEFTDDDGTTYKWDR LRAWVPQ
Subjt:  EVEATAEVSSPSGSRNFGIVEGDLDRPTTPPEGEEEFTDDDGTTYKWDRALRAWVPQ

A0A5A7TDA7 Splicing factor U2AF-associated protein 24.5e-7885.8Show/hide
Query:  IFYS---FVVTGMDNSSVGNSGMVTEAGWYILGEDQQHVGPYAFSELREHFLNGYLLESTLAWSEGQSEWQPLSSIPGLTTEVFQRESDSSTAVPVNNND
        ++YS   F V GMDN+SVGNS MVTEAGWYILGE+QQHVGPYAFSELREHFLNGYLLESTLAWSEGQSEWQPLSSIPGLTT+V++++S+ STAVP NNN+
Subjt:  IFYS---FVVTGMDNSSVGNSGMVTEAGWYILGEDQQHVGPYAFSELREHFLNGYLLESTLAWSEGQSEWQPLSSIPGLTTEVFQRESDSSTAVPVNNND

Query:  DDELEKYQKEVGEVEATAEVSSPSGSRNFGIVEGDLDRPTTPPEGEEEFTDDDGTTYKWDRALRAWVPQ
        DDELEKYQKEVGE EATAEVS PSGSRNFG+VEGDL+RPTTPPEGEEEFTDDDGTTYKWDR LRAWVPQ
Subjt:  DDELEKYQKEVGEVEATAEVSSPSGSRNFGIVEGDLDRPTTPPEGEEEFTDDDGTTYKWDRALRAWVPQ

A0A5D3BUE8 Splicing factor U2AF-associated protein 24.5e-7885.8Show/hide
Query:  IFYS---FVVTGMDNSSVGNSGMVTEAGWYILGEDQQHVGPYAFSELREHFLNGYLLESTLAWSEGQSEWQPLSSIPGLTTEVFQRESDSSTAVPVNNND
        ++YS   F V GMDN+SVGNS MVTEAGWYILGE+QQHVGPYAFSELREHFLNGYLLESTLAWSEGQSEWQPLSSIPGLTT+V++++S+ STAVP NNN+
Subjt:  IFYS---FVVTGMDNSSVGNSGMVTEAGWYILGEDQQHVGPYAFSELREHFLNGYLLESTLAWSEGQSEWQPLSSIPGLTTEVFQRESDSSTAVPVNNND

Query:  DDELEKYQKEVGEVEATAEVSSPSGSRNFGIVEGDLDRPTTPPEGEEEFTDDDGTTYKWDRALRAWVPQ
        DDELEKYQKEVGE EATAEVS PSGSRNFG+VEGDL+RPTTPPEGEEEFTDDDGTTYKWDR LRAWVPQ
Subjt:  DDELEKYQKEVGEVEATAEVSSPSGSRNFGIVEGDLDRPTTPPEGEEEFTDDDGTTYKWDRALRAWVPQ

A0A6J1G3U1 HIV Tat-specific factor 11.5e-7084.81Show/hide
Query:  MDNSSVGNSGMVTEAGWYILGEDQQHVGPYAFSELREHFLNGYLLESTLAWSEGQSEWQPLSSIPGLTTEVFQRESDSSTAVPVNNND-DDELEKYQKEV
        MDN+  GN   VTEAGWYILGEDQQHVGPYAFSELR+HFLNGYL+ESTL WSEGQSEW PLSSI GLTT+VFQ+ESD STAVPVNNN+ DDELEKYQKEV
Subjt:  MDNSSVGNSGMVTEAGWYILGEDQQHVGPYAFSELREHFLNGYLLESTLAWSEGQSEWQPLSSIPGLTTEVFQRESDSSTAVPVNNND-DDELEKYQKEV

Query:  GEVEATAEVSSPSGSRNFGIVEGDLDRPTTPPEGEEEFTDDDGTTYKWDRALRAWVPQ
        GE E T E SSPS SRNF +VEGDLDRPTTPPEGEEEFTDDDGTTY+WDRALRAWVPQ
Subjt:  GEVEATAEVSSPSGSRNFGIVEGDLDRPTTPPEGEEEFTDDDGTTYKWDRALRAWVPQ

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT5G16260.1 RNA binding (RRM/RBD/RNP motifs) family protein2.4e-3947.98Show/hide
Query:  SSVGNSGMVTEAGWYILGEDQQHVGPYAFSELREHFLNGYLLESTLAWSEGQSEWQPLSSIPGLTTEVFQRE--------------SDSSTA-----VPV
        SS G +   T+ GWYILGE+QQ++GPY FSEL  HF NGYLLE+TL W++G+SEWQPLS+IP L + +   E              S++ T         
Subjt:  SSVGNSGMVTEAGWYILGEDQQHVGPYAFSELREHFLNGYLLESTLAWSEGQSEWQPLSSIPGLTTEVFQRE--------------SDSSTA-----VPV

Query:  NNNDDDELEKYQKEVGEVEATAEVSSPSGSRNFGIVEGDLDRPTTPPEGEEEFTDDDGTTYKWDRALRAWVPQ
        + + +DE EK+Q+E+ + EA AE           +VE D +R ++PPEGE+EFTDDDGT YKWDRA R WVPQ
Subjt:  NNNDDDELEKYQKEVGEVEATAEVSSPSGSRNFGIVEGDLDRPTTPPEGEEEFTDDDGTTYKWDRALRAWVPQ


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
CAGCTCAGTGTCGCCGCCGCCTCTCTCCCGTTCACTGCCGCCGCCGCCGTCGCCGTCGTCTTTCTTCCGCTCGTGCCGCCGCCGCCACCGTCGTCTTTATTCTGTTCGTG
CAGCTCAGCCTCCCTCCCTGCGGGTTTTGCGCTAATTTTCTACTCATTTGTTGTAACTGGTATGGATAACAGTTCTGTTGGGAACTCTGGAATGGTTACTGAAGCTGGAT
GGTATATTCTTGGTGAAGATCAGCAACATGTTGGTCCATATGCATTTTCTGAATTGCGTGAGCATTTTCTAAATGGGTATCTCTTGGAGAGTACACTGGCCTGGTCTGAA
GGACAAAGTGAATGGCAGCCATTATCGTCTATTCCTGGGTTGACAACGGAAGTATTTCAACGAGAATCTGATTCATCAACTGCAGTTCCTGTAAACAACAATGACGATGA
TGAGCTTGAGAAATATCAGAAGGAGGTTGGAGAAGTAGAAGCCACAGCTGAAGTGTCGAGTCCTTCTGGTAGTAGGAATTTTGGTATTGTGGAAGGCGATCTTGATAGAC
CTACTACACCACCTGAGGGTGAGGAGGAATTCACTGATGATGATGGGACTACATACAAGTGGGATAGGGCTCTCAGGGCCTGGGTACCTCAGTTGTGGGTCCTTGCTTTG
GTTGTTCCTCGTCTTTATAGATTATCAAATCACCCAAATGGAAAGGTTGCTGATTTTTGGGTTACATCTAATGTCGCTTGGGACTTGAGCCTCCAACATAACCTAAATGA
TTTGGAGAAAAATGAATGGGCAAATCTTTCTCATTTACTTTCTTTAATCAATCTACGACCTAATGGTGACTAG
mRNA sequenceShow/hide mRNA sequence
CAGCTCAGTGTCGCCGCCGCCTCTCTCCCGTTCACTGCCGCCGCCGCCGTCGCCGTCGTCTTTCTTCCGCTCGTGCCGCCGCCGCCACCGTCGTCTTTATTCTGTTCGTG
CAGCTCAGCCTCCCTCCCTGCGGGTTTTGCGCTAATTTTCTACTCATTTGTTGTAACTGGTATGGATAACAGTTCTGTTGGGAACTCTGGAATGGTTACTGAAGCTGGAT
GGTATATTCTTGGTGAAGATCAGCAACATGTTGGTCCATATGCATTTTCTGAATTGCGTGAGCATTTTCTAAATGGGTATCTCTTGGAGAGTACACTGGCCTGGTCTGAA
GGACAAAGTGAATGGCAGCCATTATCGTCTATTCCTGGGTTGACAACGGAAGTATTTCAACGAGAATCTGATTCATCAACTGCAGTTCCTGTAAACAACAATGACGATGA
TGAGCTTGAGAAATATCAGAAGGAGGTTGGAGAAGTAGAAGCCACAGCTGAAGTGTCGAGTCCTTCTGGTAGTAGGAATTTTGGTATTGTGGAAGGCGATCTTGATAGAC
CTACTACACCACCTGAGGGTGAGGAGGAATTCACTGATGATGATGGGACTACATACAAGTGGGATAGGGCTCTCAGGGCCTGGGTACCTCAGTTGTGGGTCCTTGCTTTG
GTTGTTCCTCGTCTTTATAGATTATCAAATCACCCAAATGGAAAGGTTGCTGATTTTTGGGTTACATCTAATGTCGCTTGGGACTTGAGCCTCCAACATAACCTAAATGA
TTTGGAGAAAAATGAATGGGCAAATCTTTCTCATTTACTTTCTTTAATCAATCTACGACCTAATGGTGACTAG
Protein sequenceShow/hide protein sequence
QLSVAAASLPFTAAAAVAVVFLPLVPPPPPSSLFCSCSSASLPAGFALIFYSFVVTGMDNSSVGNSGMVTEAGWYILGEDQQHVGPYAFSELREHFLNGYLLESTLAWSE
GQSEWQPLSSIPGLTTEVFQRESDSSTAVPVNNNDDDELEKYQKEVGEVEATAEVSSPSGSRNFGIVEGDLDRPTTPPEGEEEFTDDDGTTYKWDRALRAWVPQLWVLAL
VVPRLYRLSNHPNGKVADFWVTSNVAWDLSLQHNLNDLEKNEWANLSHLLSLINLRPNGD