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Spg027794 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg027794
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptiontRNA-specific adenosine deaminase 1
Genome locationscaffold7:32232317..32234293
RNA-Seq ExpressionSpg027794
SyntenySpg027794
Gene Ontology termsGO:0016070 - RNA metabolic process (biological process)
GO:0005622 - intracellular (cellular component)
GO:0003723 - RNA binding (molecular function)
GO:0004000 - adenosine deaminase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6575167.1 tRNA-specific adenosine deaminase TAD1, partial [Cucurbita argyrosperma subsp. sororia]4.1e-1263.64Show/hide
Query:  SFSYLENWGATIPKKVFSLYNTLPNKGKPQGREVTVFAAFLVSSPSAQ-------GDDSQCIGMVQ
        S S  E+WG TI +KVFSLYN+LP KGKPQGREVTV AAFLVSSPSAQ       G  ++C+G  Q
Subjt:  SFSYLENWGATIPKKVFSLYNTLPNKGKPQGREVTVFAAFLVSSPSAQ-------GDDSQCIGMVQ

XP_022156100.1 tRNA-specific adenosine deaminase 1 isoform X3 [Momordica charantia]3.1e-1266.07Show/hide
Query:  WGATIPKKVFSLYNTLPNKGKPQGREVTVFAAFLVSSPSAQGDDSQCIGMVQRKPS
        WG  I +KVFSLYNTLP KGKPQGREVTV AAFL+SSPS +G  ++C+G  Q  P+
Subjt:  WGATIPKKVFSLYNTLPNKGKPQGREVTVFAAFLVSSPSAQGDDSQCIGMVQRKPS

XP_038888962.1 tRNA-specific adenosine deaminase TAD1 isoform X1 [Benincasa hispida]1.1e-1262.32Show/hide
Query:  MVDSFSYLENWGATIPKKVFSLYNTLPNKGKPQGREVTVFAAFLVSSPSAQ-------GDDSQCIGMVQ
        M D FS  E WG TI +KV SLYNTLP KGKPQGREVTV AAFLVSSPS Q       G  ++C+G  Q
Subjt:  MVDSFSYLENWGATIPKKVFSLYNTLPNKGKPQGREVTVFAAFLVSSPSAQ-------GDDSQCIGMVQ

XP_038888963.1 tRNA-specific adenosine deaminase TAD1 isoform X2 [Benincasa hispida]1.1e-1262.32Show/hide
Query:  MVDSFSYLENWGATIPKKVFSLYNTLPNKGKPQGREVTVFAAFLVSSPSAQ-------GDDSQCIGMVQ
        M D FS  E WG TI +KV SLYNTLP KGKPQGREVTV AAFLVSSPS Q       G  ++C+G  Q
Subjt:  MVDSFSYLENWGATIPKKVFSLYNTLPNKGKPQGREVTVFAAFLVSSPSAQ-------GDDSQCIGMVQ

XP_038888964.1 tRNA-specific adenosine deaminase TAD1 isoform X3 [Benincasa hispida]1.1e-1262.32Show/hide
Query:  MVDSFSYLENWGATIPKKVFSLYNTLPNKGKPQGREVTVFAAFLVSSPSAQ-------GDDSQCIGMVQ
        M D FS  E WG TI +KV SLYNTLP KGKPQGREVTV AAFLVSSPS Q       G  ++C+G  Q
Subjt:  MVDSFSYLENWGATIPKKVFSLYNTLPNKGKPQGREVTVFAAFLVSSPSAQ-------GDDSQCIGMVQ

TrEMBL top hitse value%identityAlignment
A0A6J1DPC6 tRNA-specific adenosine deaminase 1 isoform X31.5e-1266.07Show/hide
Query:  WGATIPKKVFSLYNTLPNKGKPQGREVTVFAAFLVSSPSAQGDDSQCIGMVQRKPS
        WG  I +KVFSLYNTLP KGKPQGREVTV AAFL+SSPS +G  ++C+G  Q  P+
Subjt:  WGATIPKKVFSLYNTLPNKGKPQGREVTVFAAFLVSSPSAQGDDSQCIGMVQRKPS

A0A6J1H3J2 tRNA-specific adenosine deaminase 1 isoform X12.6e-1263.64Show/hide
Query:  SFSYLENWGATIPKKVFSLYNTLPNKGKPQGREVTVFAAFLVSSPSAQ-------GDDSQCIGMVQ
        S S  E+WG TI +KVFSLYN+LP KGKPQGREVTV AAFLVSSPSAQ       G  ++C+G  Q
Subjt:  SFSYLENWGATIPKKVFSLYNTLPNKGKPQGREVTVFAAFLVSSPSAQ-------GDDSQCIGMVQ

A0A6J1H6X3 tRNA-specific adenosine deaminase 1 isoform X22.6e-1263.64Show/hide
Query:  SFSYLENWGATIPKKVFSLYNTLPNKGKPQGREVTVFAAFLVSSPSAQ-------GDDSQCIGMVQ
        S S  E+WG TI +KVFSLYN+LP KGKPQGREVTV AAFLVSSPSAQ       G  ++C+G  Q
Subjt:  SFSYLENWGATIPKKVFSLYNTLPNKGKPQGREVTVFAAFLVSSPSAQ-------GDDSQCIGMVQ

A0A6J1KY57 tRNA-specific adenosine deaminase 1 isoform X22.2e-1162.3Show/hide
Query:  ENWGATIPKKVFSLYNTLPNKGKPQGREVTVFAAFLVSSPSAQ-------GDDSQCIGMVQ
        E+WG T+ +KVFSLYN+LP KGKPQG EVTV AAFLVSSPSAQ       G  ++C+G  Q
Subjt:  ENWGATIPKKVFSLYNTLPNKGKPQGREVTVFAAFLVSSPSAQ-------GDDSQCIGMVQ

A0A6J1L0J0 tRNA-specific adenosine deaminase 1 isoform X12.2e-1162.3Show/hide
Query:  ENWGATIPKKVFSLYNTLPNKGKPQGREVTVFAAFLVSSPSAQ-------GDDSQCIGMVQ
        E+WG T+ +KVFSLYN+LP KGKPQG EVTV AAFLVSSPSAQ       G  ++C+G  Q
Subjt:  ENWGATIPKKVFSLYNTLPNKGKPQGREVTVFAAFLVSSPSAQ-------GDDSQCIGMVQ

SwissProt top hitse value%identityAlignment
F4HU58 tRNA-specific adenosine deaminase TAD11.8e-1057.14Show/hide
Query:  ENWGATIPKKVFSLYNTLPNKGKPQGREVTVFAAFLVSSPS------AQGDDSQCI
        E+WG T+ +KV S Y +LP KGKPQGREVTV +AFLVSSPS      A G  ++C+
Subjt:  ENWGATIPKKVFSLYNTLPNKGKPQGREVTVFAAFLVSSPS------AQGDDSQCI

Arabidopsis top hitse value%identityAlignment
AT1G01760.1 adenosine deaminases;RNA binding;RNA binding;adenosine deaminases1.3e-1157.14Show/hide
Query:  ENWGATIPKKVFSLYNTLPNKGKPQGREVTVFAAFLVSSPS------AQGDDSQCI
        E+WG T+ +KV S Y +LP KGKPQGREVTV +AFLVSSPS      A G  ++C+
Subjt:  ENWGATIPKKVFSLYNTLPNKGKPQGREVTVFAAFLVSSPS------AQGDDSQCI


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTGGATTCATTCTCTTATTTAGAGAACTGGGGAGCGACGATACCAAAGAAAGTATTCTCACTCTACAACACTCTCCCAAATAAAGGCAAGCCTCAGGGTCGTGAAGT
CACTGTCTTCGCTGCATTTCTCGTTTCATCTCCTTCAGCACAAGGGGATGATTCACAATGCATAGGCATGGTTCAGAGGAAGCCTAGTCGTGGTGGCTGTTCTGACAAGA
TAACTCGATGA
mRNA sequenceShow/hide mRNA sequence
ATGGTGGATTCATTCTCTTATTTAGAGAACTGGGGAGCGACGATACCAAAGAAAGTATTCTCACTCTACAACACTCTCCCAAATAAAGGCAAGCCTCAGGGTCGTGAAGT
CACTGTCTTCGCTGCATTTCTCGTTTCATCTCCTTCAGCACAAGGGGATGATTCACAATGCATAGGCATGGTTCAGAGGAAGCCTAGTCGTGGTGGCTGTTCTGACAAGA
TAACTCGATGA
Protein sequenceShow/hide protein sequence
MVDSFSYLENWGATIPKKVFSLYNTLPNKGKPQGREVTVFAAFLVSSPSAQGDDSQCIGMVQRKPSRGGCSDKITR