; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg027829 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg027829
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionCCHC-type domain-containing protein
Genome locationscaffold2:38882888..38891345
RNA-Seq ExpressionSpg027829
SyntenySpg027829
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
GO:0004523 - RNA-DNA hybrid ribonuclease activity (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsIPR001878 - Zinc finger, CCHC-type
IPR002156 - Ribonuclease H domain
IPR012337 - Ribonuclease H-like superfamily
IPR025558 - Domain of unknown function DUF4283
IPR025836 - Zinc knuckle CX2CX4HX4C
IPR026960 - Reverse transcriptase zinc-binding domain
IPR036397 - Ribonuclease H superfamily
IPR040256 - Uncharacterized protein At4g02000-like
IPR044730 - Ribonuclease H-like domain, plant type


Homology Show/hide homology
GenBank top hitse value%identityAlignment
TXG48193.1 hypothetical protein EZV62_027487 [Acer yangbiense]6.9e-3531.43Show/hide
Query:  EEELTTRMAELHVTPAEKASVYQLPDSEINRSEQKLRNSILCKIHSTKKINPEIFIDKMPKIWNQEHTI-IEMVGFNIFLCKFKNAKIKGWITDSGPWFY
        E E+T     L +   E A+V+++ +  I   ++ +   ++ K+ + KK+N E F   + +IWNQ   + +E+VG N F+  F N + +  + + GPW +
Subjt:  EEELTTRMAELHVTPAEKASVYQLPDSEINRSEQKLRNSILCKIHSTKKINPEIFIDKMPKIWNQEHTI-IEMVGFNIFLCKFKNAKIKGWITDSGPWFY

Query:  DKAMILFEEPKAGVGCDEMEFRYVSLWSHFHKLPYACFSRPSAEAIGNLLGKVEKVDIQEEEDPSWGCSLRVKIQIDVFSPLKRGIFLKSGSKGEDKWIP
         K++I+ E+PK      +++F     W   H +P  C ++ + + +   +G+V  V+I  E    WG  +RVK+Q+D+  PLKR + +K G   E   + 
Subjt:  DKAMILFEEPKAGVGCDEMEFRYVSLWSHFHKLPYACFSRPSAEAIGNLLGKVEKVDIQEEEDPSWGCSLRVKIQIDVFSPLKRGIFLKSGSKGEDKWIP

Query:  VTYEKLPDFCYGCGRLGHTIKECGDTGVPS---DG-ELLYGPWLR
        + YE+LPDFC+ CGR+GH+++EC D        DG +  +G W+R
Subjt:  VTYEKLPDFCYGCGRLGHTIKECGDTGVPS---DG-ELLYGPWLR

TXG51202.1 hypothetical protein EZV62_023726 [Acer yangbiense]4.0e-3533.2Show/hide
Query:  EEELTTRMAELHVTPAEKASVYQLPDSEINRSEQKLRNSILCKIHSTKKINPEIFIDKMPKIWNQEHTI-IEMVGFNIFLCKFKNAKIKGWITDSGPWFY
        E E+    A L +   E   V+ +P  EI   E  +   ++ KI S+KK+N + FI  + ++W+    + IE+V  N+FL KF N + +  I   GPW++
Subjt:  EEELTTRMAELHVTPAEKASVYQLPDSEINRSEQKLRNSILCKIHSTKKINPEIFIDKMPKIWNQEHTI-IEMVGFNIFLCKFKNAKIKGWITDSGPWFY

Query:  DKAMILFEEPKAGVGCDEMEFRYVSLWSHFHKLPYACFSRPSAEAIGNLLGKVEKVDIQEEEDPSWGCSLRVKIQIDVFSPLKRGIFLKSGSKGEDKWIP
        DK++I+  +P+      ++ F  V +W   H +P  C +R  A+ +   +G+V  VDI  E    WG  L+VK+QID+  PLKR + L+         + 
Subjt:  DKAMILFEEPKAGVGCDEMEFRYVSLWSHFHKLPYACFSRPSAEAIGNLLGKVEKVDIQEEEDPSWGCSLRVKIQIDVFSPLKRGIFLKSGSKGEDKWIP

Query:  VTYEKLPDFCYGCGRLGHTIKECGDTGVPSDG----ELLYGPWLREP
        + YE+LP+FCY CGR+GH  K+C D     +        +G W+R P
Subjt:  VTYEKLPDFCYGCGRLGHTIKECGDTGVPSDG----ELLYGPWLREP

XP_022132681.1 uncharacterized protein LOC111005481 [Momordica charantia]3.6e-3635.93Show/hide
Query:  VTPAEKASVYQLPDSEINRSEQKLRNSILCKIHSTKKINPEIFIDKMPKIWNQEHTI--IEMVGFNIFLCKFKNAKIKGWITDSGPWFYDKAMILFEEPK
        +T  E      +  S +  + + L  S++CK+ S + I+  +  + +   W  +     ++++GFNIFL  F  +  +  I   GPW +D+A+I+ + P 
Subjt:  VTPAEKASVYQLPDSEINRSEQKLRNSILCKIHSTKKINPEIFIDKMPKIWNQEHTI--IEMVGFNIFLCKFKNAKIKGWITDSGPWFYDKAMILFEEPK

Query:  AGVGCDEMEFRYVSLWSHFHKLPYACFSRPSAEAIGNLLGKVEKVDIQEEEDPSWGCSLRVKIQIDVFSPLKRGIFLKSGSKGEDKWIPVTYEKLPDFCY
        +     +M+FR VSLW HF  L  AC ++  A  +GN +G  E V+     +  WG  LRV+++ DV  PL RGI L         WIP+ YE+LPDF Y
Subjt:  AGVGCDEMEFRYVSLWSHFHKLPYACFSRPSAEAIGNLLGKVEKVDIQEEEDPSWGCSLRVKIQIDVFSPLKRGIFLKSGSKGEDKWIPVTYEKLPDFCY

Query:  GCGRLGHTIKECGDTGVPS-DGELLYGPWLR
         CGRL H +K+C D  V S    L YGPWLR
Subjt:  GCGRLGHTIKECGDTGVPS-DGELLYGPWLR

XP_022149484.1 uncharacterized protein LOC111017902 [Momordica charantia]2.1e-3633.44Show/hide
Query:  ILCKIHSTKKINPEIFIDKMPKIWN-QEHTIIEMVGFNIFLCKFKNAKIKGWITDSGPWFYDKAMILFEEPKAGVGCDEMEFRYVSLWSHFHKLPYACFS
        ++ K+H++K+I+ E     M  +W     T  E +G NI++  FK+   K  +  SGPW ++K++++   P A     +M F + + W   H +P+ C S
Subjt:  ILCKIHSTKKINPEIFIDKMPKIWN-QEHTIIEMVGFNIFLCKFKNAKIKGWITDSGPWFYDKAMILFEEPKAGVGCDEMEFRYVSLWSHFHKLPYACFS

Query:  RPSAEAIGNLLGKVEKVDIQEEEDPSWGCSLRVKIQIDVFSPLKRGIFLKSGSKGEDKWIPVTYEKLPDFCYGCGRLGHTIKECGDTG--VPSDGELLYG
           A  +G  LG VE+++  +  D   G  +RV+++IDV  PL+RGI LK+ S G+D W P+ YEKLPDFCY CG++GH+ +EC      V ++    YG
Subjt:  RPSAEAIGNLLGKVEKVDIQEEEDPSWGCSLRVKIQIDVFSPLKRGIFLKSGSKGEDKWIPVTYEKLPDFCYGCGRLGHTIKECGDTG--VPSDGELLYG

Query:  PWLREPY---RIGNLERKHLFRNIHGR-GRG---GAWSGGRGQWRSDYSDSGDANVREFQNASPEQRTVVGNSPESTSKIPASTSMAIEKESVTVVKINM
         WLR       + + E +  +R   GR GRG       GGRG WR       D N R+        R  V    E   ++P        +ESVT  +I +
Subjt:  PWLREPY---RIGNLERKHLFRNIHGR-GRG---GAWSGGRGQWRSDYSDSGDANVREFQNASPEQRTVVGNSPESTSKIPASTSMAIEKESVTVVKINM

Query:  EAEKI
           KI
Subjt:  EAEKI

XP_022156185.1 uncharacterized protein LOC111023135 [Momordica charantia]4.5e-3432.11Show/hide
Query:  DEEELTTRMAELHVTPAEKASVYQLPDSEINRSEQKLRNSILCKIHSTKKINPEIFIDKMPKIWNQEHTI-IEMVGFNIFLCKFKNAKIKGWITDSGPWF
        D E L     +  +T  E      +    +  +EQ L  S++ K+ + + I+ ++    +   W  EH + +E +G N+FL  F        +  +GPWF
Subjt:  DEEELTTRMAELHVTPAEKASVYQLPDSEINRSEQKLRNSILCKIHSTKKINPEIFIDKMPKIWNQEHTI-IEMVGFNIFLCKFKNAKIKGWITDSGPWF

Query:  YDKAMILFEEPKAGVGCDEMEFRYVSLWSHFHKLPYACFSRPSAEAIGNLLGKVEKVDIQEEEDPSWGCSLRVKIQIDVFSPLKRGIFLKSGSKGEDKWI
        +DKA+I+ ++P +     E+EF  V+ W H   LP +  ++  A  +GN +G    VD   E+  SWG SLR+++ ID+  PL+RGI +         WI
Subjt:  YDKAMILFEEPKAGVGCDEMEFRYVSLWSHFHKLPYACFSRPSAEAIGNLLGKVEKVDIQEEEDPSWGCSLRVKIQIDVFSPLKRGIFLKSGSKGEDKWI

Query:  PVTYEKLPDFCYGCGRLGHTIKECGDTGVPSDGELL----YGPWLR
        P+ YE+LPDFCY CG +GH+  +C    + +  +      YGPWLR
Subjt:  PVTYEKLPDFCYGCGRLGHTIKECGDTGVPSDGELL----YGPWLR

TrEMBL top hitse value%identityAlignment
A0A2N9J5S8 CCHC-type domain-containing protein8.8e-3623.03Show/hide
Query:  EELTTRMAELHVTPAEKASVYQLPDSEINRSEQKLRNSILCKIHSTKKINPEIFIDKMPKIWNQEHTI-IEMVGFNIFLCKFKNAKIKGWITDSGPWFYD
        EEL  +   + ++  E++++ +L   +I +S+ + + S+L ++ +++  N E F   +  +W     I +  +  N+FL  F        +    PW +D
Subjt:  EELTTRMAELHVTPAEKASVYQLPDSEINRSEQKLRNSILCKIHSTKKINPEIFIDKMPKIWNQEHTI-IEMVGFNIFLCKFKNAKIKGWITDSGPWFYD

Query:  KAMILFEEPKAGVGCDEMEFRYVSLWSHFHKLPYACFSRPSAEAIGNLLGKVEKVDIQEEEDPSWGCSLRVKIQIDVFSPLKRGIFLKSGSKGEDKWIPV
        K +I     +A +   +++FRY + W   + LP     +   E IGN +G + +VD+  E    WG  LR++++IDV  PL RG  L+ G  G+  W+  
Subjt:  KAMILFEEPKAGVGCDEMEFRYVSLWSHFHKLPYACFSRPSAEAIGNLLGKVEKVDIQEEEDPSWGCSLRVKIQIDVFSPLKRGIFLKSGSKGEDKWIPV

Query:  TYEKLPDFCYGCGRLGHTIKEC-------GDTGVPSDGELLYGPWLRE-PYRIGNLERKHLFRNIHGRGRGGAWSGGRGQWRSDYSDSGDANVREFQNAS
         YE LP FCY CGR+GH+  EC       GD  V +D    +G WLR  P R G   R+ +          G+ S G      D    GD    E   A+
Subjt:  TYEKLPDFCYGCGRLGHTIKEC-------GDTGVPSDGELLYGPWLRE-PYRIGNLERKHLFRNIHGRGRGGAWSGGRGQWRSDYSDSGDANVREFQNAS

Query:  PEQRTVVGNSPESTSKIPASTSMAIEKESVTVVKINMEAEKIELKDADSGGISNGKKDAFKDNRGNLGLAEEISLVEELAVSNGKGKQKVPFFMEVDTEQ
              V  + E  S +P  T +  +++S  V++     ++I +K A    I       FK     LGL  EIS +        +G ++   ++      
Subjt:  PEQRTVVGNSPESTSKIPASTSMAIEKESVTVVKINMEAEKIELKDADSGGISNGKKDAFKDNRGNLGLAEEISLVEELAVSNGKGKQKVPFFMEVDTEQ

Query:  KELDVEHAKLKLDVEKDNGKQS---DGLV----VGPITKDWNEIGNQQLDGQDIGLVTKKDSRPRKWKRLGREKQHVVTRMASDHRPIIADWKEEPPDIG
               +K +L   KD G +    +GL+     G   K W        D   +G    K     +          ++         I+ D    P D  
Subjt:  KELDVEHAKLKLDVEKDNGKQS---DGLV----VGPITKDWNEIGNQQLDGQDIGLVTKKDSRPRKWKRLGREKQHVVTRMASDHRPIIADWKEEPPDIG

Query:  RNRTRRPKRFEEIWTKYSECREIVEQVWDDPEGIGNDDLLAKTRKCLHRLGVQLQNSSEASGSGNGNKEIRWKQYWKIQLPEKIKVCGWKIYNDILPTTT
               ++ ++I    S  R   + +W      GN   +   +     L  +    +E+S +G+  K   W   W  ++ +KI+   W+   +ILPT T
Subjt:  RNRTRRPKRFEEIWTKYSECREIVEQVWDDPEGIGNDDLLAKTRKCLHRLGVQLQNSSEASGSGNGNKEIRWKQYWKIQLPEKIKVCGWKIYNDILPTTT

Query:  NLINRGLDINSSCLLCRNSPETTTHLFWECKMTRGMWDIFFPCSNDLYSEDRRNWRVLDYCEKLWKGSRGDGWESNRICQSLVICWQIWNFRNTIFHHKQ
         L ++ +  + SC  C + PET  H+ W C   + +W +   CS  + +    N    D+ ++  +        S  I   + + W +W  RN +     
Subjt:  NLINRGLDINSSCLLCRNSPETTTHLFWECKMTRGMWDIFFPCSNDLYSEDRRNWRVLDYCEKLWKGSRGDGWESNRICQSLVICWQIWNFRNTIFHHKQ

Query:  IPNKEGLRQQINYSLSIIEERRKSYPLNRERRSGFVVEQTESGRTWGAESTEFWVLNSDASWCEKTKRAGIGWILRQGDGSPVTAA
            EG+   ++   +        + L+        +E  ES  +W       + L+    +   +   G+G +LR  +G  V A+
Subjt:  IPNKEGLRQQINYSLSIIEERRKSYPLNRERRSGFVVEQTESGRTWGAESTEFWVLNSDASWCEKTKRAGIGWILRQGDGSPVTAA

A0A5C7GU64 CCHC-type domain-containing protein3.3e-3531.43Show/hide
Query:  EEELTTRMAELHVTPAEKASVYQLPDSEINRSEQKLRNSILCKIHSTKKINPEIFIDKMPKIWNQEHTI-IEMVGFNIFLCKFKNAKIKGWITDSGPWFY
        E E+T     L +   E A+V+++ +  I   ++ +   ++ K+ + KK+N E F   + +IWNQ   + +E+VG N F+  F N + +  + + GPW +
Subjt:  EEELTTRMAELHVTPAEKASVYQLPDSEINRSEQKLRNSILCKIHSTKKINPEIFIDKMPKIWNQEHTI-IEMVGFNIFLCKFKNAKIKGWITDSGPWFY

Query:  DKAMILFEEPKAGVGCDEMEFRYVSLWSHFHKLPYACFSRPSAEAIGNLLGKVEKVDIQEEEDPSWGCSLRVKIQIDVFSPLKRGIFLKSGSKGEDKWIP
         K++I+ E+PK      +++F     W   H +P  C ++ + + +   +G+V  V+I  E    WG  +RVK+Q+D+  PLKR + +K G   E   + 
Subjt:  DKAMILFEEPKAGVGCDEMEFRYVSLWSHFHKLPYACFSRPSAEAIGNLLGKVEKVDIQEEEDPSWGCSLRVKIQIDVFSPLKRGIFLKSGSKGEDKWIP

Query:  VTYEKLPDFCYGCGRLGHTIKECGDTGVPS---DG-ELLYGPWLR
        + YE+LPDFC+ CGR+GH+++EC D        DG +  +G W+R
Subjt:  VTYEKLPDFCYGCGRLGHTIKECGDTGVPS---DG-ELLYGPWLR

A0A5C7H466 CCHC-type domain-containing protein2.0e-3533.2Show/hide
Query:  EEELTTRMAELHVTPAEKASVYQLPDSEINRSEQKLRNSILCKIHSTKKINPEIFIDKMPKIWNQEHTI-IEMVGFNIFLCKFKNAKIKGWITDSGPWFY
        E E+    A L +   E   V+ +P  EI   E  +   ++ KI S+KK+N + FI  + ++W+    + IE+V  N+FL KF N + +  I   GPW++
Subjt:  EEELTTRMAELHVTPAEKASVYQLPDSEINRSEQKLRNSILCKIHSTKKINPEIFIDKMPKIWNQEHTI-IEMVGFNIFLCKFKNAKIKGWITDSGPWFY

Query:  DKAMILFEEPKAGVGCDEMEFRYVSLWSHFHKLPYACFSRPSAEAIGNLLGKVEKVDIQEEEDPSWGCSLRVKIQIDVFSPLKRGIFLKSGSKGEDKWIP
        DK++I+  +P+      ++ F  V +W   H +P  C +R  A+ +   +G+V  VDI  E    WG  L+VK+QID+  PLKR + L+         + 
Subjt:  DKAMILFEEPKAGVGCDEMEFRYVSLWSHFHKLPYACFSRPSAEAIGNLLGKVEKVDIQEEEDPSWGCSLRVKIQIDVFSPLKRGIFLKSGSKGEDKWIP

Query:  VTYEKLPDFCYGCGRLGHTIKECGDTGVPSDG----ELLYGPWLREP
        + YE+LP+FCY CGR+GH  K+C D     +        +G W+R P
Subjt:  VTYEKLPDFCYGCGRLGHTIKECGDTGVPSDG----ELLYGPWLREP

A0A6J1BSZ1 uncharacterized protein LOC1110054811.8e-3635.93Show/hide
Query:  VTPAEKASVYQLPDSEINRSEQKLRNSILCKIHSTKKINPEIFIDKMPKIWNQEHTI--IEMVGFNIFLCKFKNAKIKGWITDSGPWFYDKAMILFEEPK
        +T  E      +  S +  + + L  S++CK+ S + I+  +  + +   W  +     ++++GFNIFL  F  +  +  I   GPW +D+A+I+ + P 
Subjt:  VTPAEKASVYQLPDSEINRSEQKLRNSILCKIHSTKKINPEIFIDKMPKIWNQEHTI--IEMVGFNIFLCKFKNAKIKGWITDSGPWFYDKAMILFEEPK

Query:  AGVGCDEMEFRYVSLWSHFHKLPYACFSRPSAEAIGNLLGKVEKVDIQEEEDPSWGCSLRVKIQIDVFSPLKRGIFLKSGSKGEDKWIPVTYEKLPDFCY
        +     +M+FR VSLW HF  L  AC ++  A  +GN +G  E V+     +  WG  LRV+++ DV  PL RGI L         WIP+ YE+LPDF Y
Subjt:  AGVGCDEMEFRYVSLWSHFHKLPYACFSRPSAEAIGNLLGKVEKVDIQEEEDPSWGCSLRVKIQIDVFSPLKRGIFLKSGSKGEDKWIPVTYEKLPDFCY

Query:  GCGRLGHTIKECGDTGVPS-DGELLYGPWLR
         CGRL H +K+C D  V S    L YGPWLR
Subjt:  GCGRLGHTIKECGDTGVPS-DGELLYGPWLR

A0A6J1D765 uncharacterized protein LOC1110179021.0e-3633.44Show/hide
Query:  ILCKIHSTKKINPEIFIDKMPKIWN-QEHTIIEMVGFNIFLCKFKNAKIKGWITDSGPWFYDKAMILFEEPKAGVGCDEMEFRYVSLWSHFHKLPYACFS
        ++ K+H++K+I+ E     M  +W     T  E +G NI++  FK+   K  +  SGPW ++K++++   P A     +M F + + W   H +P+ C S
Subjt:  ILCKIHSTKKINPEIFIDKMPKIWN-QEHTIIEMVGFNIFLCKFKNAKIKGWITDSGPWFYDKAMILFEEPKAGVGCDEMEFRYVSLWSHFHKLPYACFS

Query:  RPSAEAIGNLLGKVEKVDIQEEEDPSWGCSLRVKIQIDVFSPLKRGIFLKSGSKGEDKWIPVTYEKLPDFCYGCGRLGHTIKECGDTG--VPSDGELLYG
           A  +G  LG VE+++  +  D   G  +RV+++IDV  PL+RGI LK+ S G+D W P+ YEKLPDFCY CG++GH+ +EC      V ++    YG
Subjt:  RPSAEAIGNLLGKVEKVDIQEEEDPSWGCSLRVKIQIDVFSPLKRGIFLKSGSKGEDKWIPVTYEKLPDFCYGCGRLGHTIKECGDTG--VPSDGELLYG

Query:  PWLREPY---RIGNLERKHLFRNIHGR-GRG---GAWSGGRGQWRSDYSDSGDANVREFQNASPEQRTVVGNSPESTSKIPASTSMAIEKESVTVVKINM
         WLR       + + E +  +R   GR GRG       GGRG WR       D N R+        R  V    E   ++P        +ESVT  +I +
Subjt:  PWLREPY---RIGNLERKHLFRNIHGR-GRG---GAWSGGRGQWRSDYSDSGDANVREFQNASPEQRTVVGNSPESTSKIPASTSMAIEKESVTVVKINM

Query:  EAEKI
           KI
Subjt:  EAEKI

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G34320.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein2.1e-1024.08Show/hide
Query:  RGLDINSSCLLCRNSPETTTHLFWECKMTRGMWDIFFPCSNDLYSEDRRNWRVLDYCEKLWKGSRGDGWESNRICQSLV--ICWQIWNFRNTI-FHHKQI
        R L   +SC+ C +S ET  HL ++C   R +W I     + + +     W    Y    W  +            +LV  + W++W  RN + F  K+ 
Subjt:  RGLDINSSCLLCRNSPETTTHLFWECKMTRGMWDIFFPCSNDLYSEDRRNWRVLDYCEKLWKGSRGDGWESNRICQSLV--ICWQIWNFRNTI-FHHKQI

Query:  PNKEGLRQQINYSLSIIEERRKSYPLNRE---RRSGFVVEQTESGRTWGAESTEFWVLNSDASWCEKTKRAGIGWILRQGDGSPVTAAFRYIEHQWPVSW
           E LR+ +        E  + +   RE   + SG  VE+  S + W A   ++   N+DA+W  +  R GIGWILR   G  +    R +     V  
Subjt:  PNKEGLRQQINYSLSIIEERRKSYPLNRE---RRSGFVVEQTESGRTWGAESTEFWVLNSDASWCEKTKRAGIGWILRQGDGSPVTAAFRYIEHQWPVSW

Query:  LEALAIVDGLKSIPP-SSRKLIIELDSLQVVHLLEGKEEDGTEMAFFIDEARRLLECLQVNSIRHISRRFNNMAHQMAQQACS-TRSSFKWAYVFPAWL
         E  A+   + ++   + +++I E D+  +V+LL   ++    +   +++ ++LL   +        R  N +A ++A+++ S +    K   + P WL
Subjt:  LEALAIVDGLKSIPP-SSRKLIIELDSLQVVHLLEGKEEDGTEMAFFIDEARRLLECLQVNSIRHISRRFNNMAHQMAQQACS-TRSSFKWAYVFPAWL

AT4G04650.1 RNA-directed DNA polymerase (reverse transcriptase)-related family protein4.6e-0532.39Show/hide
Query:  YWKIQLPEKIKVCGWKIYNDILPTTTNLINRGLDINSSCLLCRNSPETTTHLFWECKMTRGMWDIFFPCSN
        ++K  +P+   +C W +  + L T   L N GL I + CLLC    ++  HLF+EC+ +  +W  F   +N
Subjt:  YWKIQLPEKIKVCGWKIYNDILPTTTNLINRGLDINSSCLLCRNSPETTTHLFWECKMTRGMWDIFFPCSN

AT4G29090.1 Ribonuclease H-like superfamily protein2.0e-1623.94Show/hide
Query:  WKQYWKIQLPEKIKVCGWKIYNDILPTTTNLINRGLDINSSCLLCRNSPETTTHLFWECKMTRGMWDIFFPCSNDLYSEDRRNWRVLDYCEKLWKGSRGD
        +++ WK Q   KI+   WK  ++ LP    L  R L   S+C+ C +  ET  HL ++C   R  W I     + +       W    Y    W  + G+
Subjt:  WKQYWKIQLPEKIKVCGWKIYNDILPTTTNLINRGLDINSSCLLCRNSPETTTHLFWECKMTRGMWDIFFPCSNDLYSEDRRNWRVLDYCEKLWKGSRGD

Query:  GWESNRICQSLV--ICWQIWNFRN-TIFHHKQIPNKEGLRQQINYSLSIIEERRKSYPLNRERRSGFV---VEQTESGRTWGAESTEFWVLNSDASWCEK
        G         LV  + W++W  RN  +F  ++   +E LR+         E+  + + +  E  S      V ++  GR W     ++   N+DA+W   
Subjt:  GWESNRICQSLV--ICWQIWNFRN-TIFHHKQIPNKEGLRQQINYSLSIIEERRKSYPLNRERRSGFV---VEQTESGRTWGAESTEFWVLNSDASWCEK

Query:  TKRAGIGWILRQGDGSPVTAAFRYIEHQWPVSWLEALAIVDGLKSIPPSSRKLIIELDSLQVVHLLEGKEEDGTEMAFFIDEARRLLECLQVNSIRHISR
         +R GIGW+LR   G       R +     V   E  A+   + S+       +I     QV+  +   +E    +   I + +RLL          I R
Subjt:  TKRAGIGWILRQGDGSPVTAAFRYIEHQWPVSWLEALAIVDGLKSIPPSSRKLIIELDSLQVVHLLEGKEEDGTEMAFFIDEARRLLECLQVNSIRHISR

Query:  RFNNMAHQMAQQACSTRSSFKWAY-VFPAW
          N +A ++A+++ S  +     Y + P+W
Subjt:  RFNNMAHQMAQQACSTRSSFKWAY-VFPAW

AT5G18880.1 RNA-directed DNA polymerase (reverse transcriptase)-related family protein4.2e-0633.82Show/hide
Query:  KQYWKIQLPEKIKVCGWKIYNDILPTTTNLINRGLDINSSCLLCRNSPETTTHLFWECKMTRGMWDIF
        K  W  +   +  +  W  + + LPT   L   G++I SS +LC N  ET  HLF+EC  +  +W+ F
Subjt:  KQYWKIQLPEKIKVCGWKIYNDILPTTTNLINRGLDINSSCLLCRNSPETTTHLFWECKMTRGMWDIF

AT5G65005.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein1.8e-0418.22Show/hide
Query:  ICWQIWNFRN-TIFHHKQIPNKEGLRQQINYSLSIIEERRKSYPLNRERRSGFVVEQTESGRTWGAESTEFWVLNSDASWCEKTKRAGIGWILRQGDGSP
        + W+IW   N  +F+H +   +  +   +N +   ++       +  E+++G           W     +    N DAS  E+   +G+GWILR   G+ 
Subjt:  ICWQIWNFRN-TIFHHKQIPNKEGLRQQINYSLSIIEERRKSYPLNRERRSGFVVEQTESGRTWGAESTEFWVLNSDASWCEKTKRAGIGWILRQGDGSP

Query:  VTAAFRYIEHQWPVSWLEALAIVDGLK-SIPPSSRKLIIELDSLQVVHLLEGKEEDGTEMAFFIDEARRLLECLQVNSIRHISRRFNNMAHQMAQQACST
        +       + +      E   ++  ++ S     +K+I E D+  +  ++  K  +   +  F+D  +  +   +        R  N  A  +A+QA   
Subjt:  VTAAFRYIEHQWPVSWLEALAIVDGLK-SIPPSSRKLIIELDSLQVVHLLEGKEEDGTEMAFFIDEARRLLECLQVNSIRHISRRFNNMAHQMAQQACST

Query:  RSSFKWAYVFPAWL
         + +   +  P +L
Subjt:  RSSFKWAYVFPAWL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAAGAGGGGACGAGGAGGAGTTGACAACACGCATGGCTGAACTTCATGTTACTCCTGCAGAAAAAGCGAGCGTTTATCAACTTCCGGACAGCGAGATAAATCGATC
TGAACAGAAGCTGAGGAATTCAATTCTGTGCAAGATACACTCCACCAAGAAAATCAATCCTGAAATATTCATTGATAAGATGCCAAAGATATGGAACCAAGAACACACGA
TAATTGAAATGGTTGGCTTCAACATTTTTTTATGCAAATTCAAGAATGCGAAAATTAAAGGCTGGATAACGGACTCCGGACCATGGTTCTACGACAAAGCAATGATCTTG
TTCGAAGAACCCAAAGCAGGAGTTGGCTGTGATGAAATGGAGTTCAGGTACGTTTCCCTATGGTCTCACTTTCATAAACTGCCATATGCTTGTTTTTCTAGGCCATCGGC
GGAGGCAATTGGAAATTTGCTCGGGAAAGTGGAAAAGGTAGATATACAAGAGGAAGAAGATCCTTCATGGGGGTGTTCTTTGCGGGTAAAGATTCAGATTGACGTATTCA
GTCCCCTGAAAAGAGGTATTTTTCTGAAATCAGGAAGCAAGGGAGAGGACAAGTGGATACCGGTAACGTATGAGAAATTGCCGGATTTCTGCTATGGGTGTGGAAGATTG
GGTCATACGATTAAGGAGTGTGGAGATACGGGGGTTCCAAGCGATGGGGAGCTGTTGTACGGTCCTTGGTTGAGAGAACCTTATCGGATAGGCAACTTGGAAAGGAAACA
TCTGTTTCGAAACATTCATGGACGGGGGAGGGGCGGAGCATGGAGCGGAGGCAGAGGACAATGGCGATCAGATTACTCTGATAGTGGGGATGCAAATGTTCGGGAGTTTC
AGAATGCCTCGCCTGAGCAGCGGACGGTGGTGGGCAATTCGCCGGAGTCAACTTCAAAAATTCCGGCAAGTACATCAATGGCAATTGAAAAGGAAAGTGTAACGGTGGTC
AAGATAAATATGGAAGCTGAGAAAATTGAATTAAAGGATGCGGATTCGGGGGGTATCTCCAACGGTAAAAAGGATGCTTTTAAAGATAATAGAGGGAATCTGGGACTTGC
CGAAGAAATCTCTTTAGTGGAGGAGTTGGCGGTGAGTAACGGAAAAGGAAAGCAAAAAGTGCCTTTTTTCATGGAGGTTGATACGGAACAAAAGGAATTGGATGTTGAAC
ATGCAAAATTAAAATTGGATGTGGAAAAGGATAATGGTAAACAAAGTGATGGGCTGGTTGTTGGGCCTATTACTAAAGATTGGAATGAGATTGGAAATCAGCAACTGGAT
GGGCAGGATATTGGGCTTGTAACTAAGAAGGATTCTAGGCCTAGGAAATGGAAAAGGCTTGGACGAGAGAAACAACATGTGGTCACGAGAATGGCCTCTGATCATAGACC
AATCATTGCCGATTGGAAGGAGGAACCTCCTGACATTGGGAGAAATAGAACTAGACGACCCAAACGCTTCGAAGAAATATGGACAAAATACTCGGAATGTAGAGAGATAG
TGGAGCAAGTTTGGGATGATCCTGAAGGGATAGGAAATGATGATCTGCTGGCTAAAACAAGGAAGTGTCTACACAGGCTTGGAGTCCAACTCCAAAATTCCTCAGAGGCT
TCAGGTTCAGGGAATGGCAATAAGGAGATCCGATGGAAACAGTACTGGAAAATCCAACTTCCCGAGAAAATTAAAGTTTGTGGGTGGAAAATCTATAATGATATCCTTCC
AACAACAACAAACTTGATTAATCGGGGATTGGATATTAACTCTTCATGTTTACTTTGCAGGAATAGTCCGGAAACAACCACACACTTATTTTGGGAATGCAAAATGACTA
GAGGTATGTGGGATATCTTTTTTCCTTGTTCTAATGATTTGTATTCTGAAGATAGGAGGAATTGGAGAGTGCTGGACTACTGTGAGAAGCTGTGGAAAGGAAGCAGAGGA
GATGGCTGGGAGAGCAACCGAATTTGCCAGAGTCTGGTGATTTGTTGGCAAATATGGAATTTTCGAAACACAATTTTTCATCACAAACAGATACCCAACAAGGAAGGCCT
CAGACAGCAGATTAACTACAGTTTATCCATCATTGAAGAGAGAAGGAAGAGTTACCCTTTGAACCGTGAACGAAGATCTGGGTTTGTGGTCGAACAAACAGAATCGGGGC
GAACTTGGGGAGCTGAATCGACGGAGTTCTGGGTTCTAAACTCAGATGCTTCCTGGTGTGAGAAGACGAAGCGTGCCGGCATCGGGTGGATCCTCCGGCAGGGAGACGGC
TCGCCGGTTACTGCTGCGTTCAGGTACATCGAACACCAATGGCCAGTGAGTTGGCTAGAAGCACTTGCAATCGTGGATGGCCTGAAATCGATTCCCCCTTCTTCCCGAAA
GCTGATTATCGAGCTTGACTCCCTTCAGGTGGTACATTTGCTTGAGGGAAAGGAGGAGGATGGAACGGAAATGGCATTCTTCATCGATGAAGCTAGACGGCTGTTGGAGT
GTTTACAGGTGAATTCCATCAGACATATCTCAAGAAGATTCAACAACATGGCACATCAAATGGCCCAACAGGCCTGTTCTACCAGATCATCTTTTAAGTGGGCTTATGTT
TTTCCTGCTTGGTTACTTCAATTGAACAAACTGGATATTGAATGGTTTTTAGGAATTCCGAGGCGTTTCGGGCTGAACCAGGTGGAACCGGGGCGGCCAAGGGCAGTAGG
GACCGAACGGAGGCGGACGGACTCGGGCCACGCAAGTGGGCCGAGTGGTCGGCCTCGGCCCGACCATATGGGTCGGCCAAGGCCCGGTGATGTGCAAATTGCTAACCGCA
AGTGTACGGGTCAAAGAAATCGTGGTGGAGTTGTGAATGCTTGTTGTAGAATGAAGGTGATCAATATTGTAATGCTGATGATACTAGTGGATAGCCTCAAGTGGATGTAG
mRNA sequenceShow/hide mRNA sequence
ATGGCAAGAGGGGACGAGGAGGAGTTGACAACACGCATGGCTGAACTTCATGTTACTCCTGCAGAAAAAGCGAGCGTTTATCAACTTCCGGACAGCGAGATAAATCGATC
TGAACAGAAGCTGAGGAATTCAATTCTGTGCAAGATACACTCCACCAAGAAAATCAATCCTGAAATATTCATTGATAAGATGCCAAAGATATGGAACCAAGAACACACGA
TAATTGAAATGGTTGGCTTCAACATTTTTTTATGCAAATTCAAGAATGCGAAAATTAAAGGCTGGATAACGGACTCCGGACCATGGTTCTACGACAAAGCAATGATCTTG
TTCGAAGAACCCAAAGCAGGAGTTGGCTGTGATGAAATGGAGTTCAGGTACGTTTCCCTATGGTCTCACTTTCATAAACTGCCATATGCTTGTTTTTCTAGGCCATCGGC
GGAGGCAATTGGAAATTTGCTCGGGAAAGTGGAAAAGGTAGATATACAAGAGGAAGAAGATCCTTCATGGGGGTGTTCTTTGCGGGTAAAGATTCAGATTGACGTATTCA
GTCCCCTGAAAAGAGGTATTTTTCTGAAATCAGGAAGCAAGGGAGAGGACAAGTGGATACCGGTAACGTATGAGAAATTGCCGGATTTCTGCTATGGGTGTGGAAGATTG
GGTCATACGATTAAGGAGTGTGGAGATACGGGGGTTCCAAGCGATGGGGAGCTGTTGTACGGTCCTTGGTTGAGAGAACCTTATCGGATAGGCAACTTGGAAAGGAAACA
TCTGTTTCGAAACATTCATGGACGGGGGAGGGGCGGAGCATGGAGCGGAGGCAGAGGACAATGGCGATCAGATTACTCTGATAGTGGGGATGCAAATGTTCGGGAGTTTC
AGAATGCCTCGCCTGAGCAGCGGACGGTGGTGGGCAATTCGCCGGAGTCAACTTCAAAAATTCCGGCAAGTACATCAATGGCAATTGAAAAGGAAAGTGTAACGGTGGTC
AAGATAAATATGGAAGCTGAGAAAATTGAATTAAAGGATGCGGATTCGGGGGGTATCTCCAACGGTAAAAAGGATGCTTTTAAAGATAATAGAGGGAATCTGGGACTTGC
CGAAGAAATCTCTTTAGTGGAGGAGTTGGCGGTGAGTAACGGAAAAGGAAAGCAAAAAGTGCCTTTTTTCATGGAGGTTGATACGGAACAAAAGGAATTGGATGTTGAAC
ATGCAAAATTAAAATTGGATGTGGAAAAGGATAATGGTAAACAAAGTGATGGGCTGGTTGTTGGGCCTATTACTAAAGATTGGAATGAGATTGGAAATCAGCAACTGGAT
GGGCAGGATATTGGGCTTGTAACTAAGAAGGATTCTAGGCCTAGGAAATGGAAAAGGCTTGGACGAGAGAAACAACATGTGGTCACGAGAATGGCCTCTGATCATAGACC
AATCATTGCCGATTGGAAGGAGGAACCTCCTGACATTGGGAGAAATAGAACTAGACGACCCAAACGCTTCGAAGAAATATGGACAAAATACTCGGAATGTAGAGAGATAG
TGGAGCAAGTTTGGGATGATCCTGAAGGGATAGGAAATGATGATCTGCTGGCTAAAACAAGGAAGTGTCTACACAGGCTTGGAGTCCAACTCCAAAATTCCTCAGAGGCT
TCAGGTTCAGGGAATGGCAATAAGGAGATCCGATGGAAACAGTACTGGAAAATCCAACTTCCCGAGAAAATTAAAGTTTGTGGGTGGAAAATCTATAATGATATCCTTCC
AACAACAACAAACTTGATTAATCGGGGATTGGATATTAACTCTTCATGTTTACTTTGCAGGAATAGTCCGGAAACAACCACACACTTATTTTGGGAATGCAAAATGACTA
GAGGTATGTGGGATATCTTTTTTCCTTGTTCTAATGATTTGTATTCTGAAGATAGGAGGAATTGGAGAGTGCTGGACTACTGTGAGAAGCTGTGGAAAGGAAGCAGAGGA
GATGGCTGGGAGAGCAACCGAATTTGCCAGAGTCTGGTGATTTGTTGGCAAATATGGAATTTTCGAAACACAATTTTTCATCACAAACAGATACCCAACAAGGAAGGCCT
CAGACAGCAGATTAACTACAGTTTATCCATCATTGAAGAGAGAAGGAAGAGTTACCCTTTGAACCGTGAACGAAGATCTGGGTTTGTGGTCGAACAAACAGAATCGGGGC
GAACTTGGGGAGCTGAATCGACGGAGTTCTGGGTTCTAAACTCAGATGCTTCCTGGTGTGAGAAGACGAAGCGTGCCGGCATCGGGTGGATCCTCCGGCAGGGAGACGGC
TCGCCGGTTACTGCTGCGTTCAGGTACATCGAACACCAATGGCCAGTGAGTTGGCTAGAAGCACTTGCAATCGTGGATGGCCTGAAATCGATTCCCCCTTCTTCCCGAAA
GCTGATTATCGAGCTTGACTCCCTTCAGGTGGTACATTTGCTTGAGGGAAAGGAGGAGGATGGAACGGAAATGGCATTCTTCATCGATGAAGCTAGACGGCTGTTGGAGT
GTTTACAGGTGAATTCCATCAGACATATCTCAAGAAGATTCAACAACATGGCACATCAAATGGCCCAACAGGCCTGTTCTACCAGATCATCTTTTAAGTGGGCTTATGTT
TTTCCTGCTTGGTTACTTCAATTGAACAAACTGGATATTGAATGGTTTTTAGGAATTCCGAGGCGTTTCGGGCTGAACCAGGTGGAACCGGGGCGGCCAAGGGCAGTAGG
GACCGAACGGAGGCGGACGGACTCGGGCCACGCAAGTGGGCCGAGTGGTCGGCCTCGGCCCGACCATATGGGTCGGCCAAGGCCCGGTGATGTGCAAATTGCTAACCGCA
AGTGTACGGGTCAAAGAAATCGTGGTGGAGTTGTGAATGCTTGTTGTAGAATGAAGGTGATCAATATTGTAATGCTGATGATACTAGTGGATAGCCTCAAGTGGATGTAG
Protein sequenceShow/hide protein sequence
MARGDEEELTTRMAELHVTPAEKASVYQLPDSEINRSEQKLRNSILCKIHSTKKINPEIFIDKMPKIWNQEHTIIEMVGFNIFLCKFKNAKIKGWITDSGPWFYDKAMIL
FEEPKAGVGCDEMEFRYVSLWSHFHKLPYACFSRPSAEAIGNLLGKVEKVDIQEEEDPSWGCSLRVKIQIDVFSPLKRGIFLKSGSKGEDKWIPVTYEKLPDFCYGCGRL
GHTIKECGDTGVPSDGELLYGPWLREPYRIGNLERKHLFRNIHGRGRGGAWSGGRGQWRSDYSDSGDANVREFQNASPEQRTVVGNSPESTSKIPASTSMAIEKESVTVV
KINMEAEKIELKDADSGGISNGKKDAFKDNRGNLGLAEEISLVEELAVSNGKGKQKVPFFMEVDTEQKELDVEHAKLKLDVEKDNGKQSDGLVVGPITKDWNEIGNQQLD
GQDIGLVTKKDSRPRKWKRLGREKQHVVTRMASDHRPIIADWKEEPPDIGRNRTRRPKRFEEIWTKYSECREIVEQVWDDPEGIGNDDLLAKTRKCLHRLGVQLQNSSEA
SGSGNGNKEIRWKQYWKIQLPEKIKVCGWKIYNDILPTTTNLINRGLDINSSCLLCRNSPETTTHLFWECKMTRGMWDIFFPCSNDLYSEDRRNWRVLDYCEKLWKGSRG
DGWESNRICQSLVICWQIWNFRNTIFHHKQIPNKEGLRQQINYSLSIIEERRKSYPLNRERRSGFVVEQTESGRTWGAESTEFWVLNSDASWCEKTKRAGIGWILRQGDG
SPVTAAFRYIEHQWPVSWLEALAIVDGLKSIPPSSRKLIIELDSLQVVHLLEGKEEDGTEMAFFIDEARRLLECLQVNSIRHISRRFNNMAHQMAQQACSTRSSFKWAYV
FPAWLLQLNKLDIEWFLGIPRRFGLNQVEPGRPRAVGTERRRTDSGHASGPSGRPRPDHMGRPRPGDVQIANRKCTGQRNRGGVVNACCRMKVINIVMLMILVDSLKWM