; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg027847 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg027847
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionTy3-gypsy retrotransposon protein
Genome locationscaffold2:39071016..39075660
RNA-Seq ExpressionSpg027847
SyntenySpg027847
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0047477.1 uncharacterized protein E6C27_scaffold498G00940 [Cucumis melo var. makuwa]2.1e-1040.34Show/hide
Query:  QDQLESVENEDEGWTLVTRRKKQKKHYVQREPHMFRNYRRKNMSQKQKRKIKGLRKPKLVVEENQDFVMSRQPVTLKDFFPKNFLNDDHEDIPEIVACHA
        +++ + V+N +EGWTLVTRRKK+K+ + Q+E   +R YR K  SQ++  + K  RK   ++EE++     R+P+ LKDFFPKNF         EIV+CH 
Subjt:  QDQLESVENEDEGWTLVTRRKKQKKHYVQREPHMFRNYRRKNMSQKQKRKIKGLRKPKLVVEENQDFVMSRQPVTLKDFFPKNFLNDDHEDIPEIVACHA

Query:  VNTCEEGDSSSSPSQNAKK
         +T EE    S+  +   K
Subjt:  VNTCEEGDSSSSPSQNAKK

KAA0047477.1 uncharacterized protein E6C27_scaffold498G00940 [Cucumis melo var. makuwa]1.8e-0629.74Show/hide
Query:  IATAEDLMLGKFISSSQQPN-ETSSPDVMSVMMTDAGTSEERMAEVEKKISMLLKMVQEKDQEIASLRNQMESRDVAESKICQDQLESVENEDEGWTLVT
        I   E+  + +  S S++ N E   P++MSVM+TD  TSE+RMAE+EKK++ML+K V+E+D EIA L+N +ESRD AES        +++N ++G  ++ 
Subjt:  IATAEDLMLGKFISSSQQPN-ETSSPDVMSVMMTDAGTSEERMAEVEKKISMLLKMVQEKDQEIASLRNQMESRDVAESKICQDQLESVENEDEGWTLVT

Query:  RRKKQKKHYVQREPHMFRNYRRKNMSQKQKRKIKGLRKPKLVVEENQDFVMSRQPVTLK--------DFFPKNFLNDDHEDIPEIVACHAVNTCE
          + Q    +             ++S +Q +++             Q F +  +P T +         + P  F   D +  P+    H + TCE
Subjt:  RRKKQKKHYVQREPHMFRNYRRKNMSQKQKRKIKGLRKPKLVVEENQDFVMSRQPVTLK--------DFFPKNFLNDDHEDIPEIVACHAVNTCE

KAA0047477.1 uncharacterized protein E6C27_scaffold498G00940 [Cucumis melo var. makuwa]1.8e-3837.54Show/hide
Query:  EDIPEIVACHAVNTCEEGDSSSSPSQNAKKESIEEIDACEVQSKETSAHPAKSKAPKEE-------ASSNVPILRYVPLSRRKKGESPFTECSGILKVGD
        ED+ EI++     T  +G   +       K+S  + DA   Q         K +AP+ E         SN P+LRY+PLSRRKKGESPFTECS  L V +
Subjt:  EDIPEIVACHAVNTCEEGDSSSSPSQNAKKESIEEIDACEVQSKETSAHPAKSKAPKEE-------ASSNVPILRYVPLSRRKKGESPFTECSGILKVGD

Query:  VEILKENFTTPLTAITK------------------------------------------------------------QKKLQKEGYAIPSSRAGLGYNPP
         EILKENFT PLT I K                                                            QKKLQK+GY+IP+SRAG+GY   
Subjt:  VEILKENFTTPLTAITK------------------------------------------------------------QKKLQKEGYAIPSSRAGLGYNPP

Query:  EPVRITRKW--KVVDAHHITVEEMGDPEDKKNDDSQKISVFDRIKAPTTRLSVHQRLKYSSSKKEGQSKTSTPTRCSVFQRLSVSTSKKVDEPP-----R
        EPVRIT K   KV +  HITVEE  D E+ K   SQ+ SVFDRI     R SV QR+  S +K   Q  T + TR S FQRL+ S  K     P     +
Subjt:  EPVRITRKW--KVVDAHHITVEEMGDPEDKKNDDSQKISVFDRIKAPTTRLSVHQRLKYSSSKKEGQSKTSTPTRCSVFQRLSVSTSKKVDEPP-----R

Query:  SVFNRLQATYGQCKGKLKSLEIDESDEMNDNNGFSSTVPSRMKRKPYVLINTEGALK
        S F RL  +  + + K      ++S  +  +    S  PSRMKRK +V +NTEG+LK
Subjt:  SVFNRLQATYGQCKGKLKSLEIDESDEMNDNNGFSSTVPSRMKRKPYVLINTEGALK

KAA0061113.1 ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa]5.1e-4131.68Show/hide
Query:  MLLKMVQEKDQEIASLRNQMESRDVAESKICQDQLESVENEDEGWTLVTRRKKQKKHYVQREPHMFRNYRRKNMSQKQKRKIKGLRKPKLVVEENQDFVM
        ++L++ +EK  ++  L  ++   D       Q++   +E +DEGWT+VTRRKK+K   +Q+E  ++ NYRR N +QK K+K K  RK KLV E+++DF  
Subjt:  MLLKMVQEKDQEIASLRNQMESRDVAESKICQDQLESVENEDEGWTLVTRRKKQKKHYVQREPHMFRNYRRKNMSQKQKRKIKGLRKPKLVVEENQDFVM

Query:  SRQPVTLKDFFPKNFLNDDHEDIPEIVA-----------------CHAVNTCEEG----------------------------DSSSS------------
        +++ VTL DFFP  FL D  ++ P +VA                 C +++  +E                             D+ S+            
Subjt:  SRQPVTLKDFFPKNFLNDDHEDIPEIVA-----------------CHAVNTCEEG----------------------------DSSSS------------

Query:  --------------------------------------------PSQN----------AKKESIEEIDACEVQSKETSAHPAKSKAPKEEASSNVPILRY
                                                    P  N          A +ES +          E S   AKS    +E +SN PILRY
Subjt:  --------------------------------------------PSQN----------AKKESIEEIDACEVQSKETSAHPAKSKAPKEEASSNVPILRY

Query:  VPLSRRKKGESPFTECSGILKVGDVEILKENFTTPLTAITK--------------------------------------------------------QKK
        VPLSRRKKGESPF E    LKVGD+E+LKE+FTTPLT ITK                                                        QKK
Subjt:  VPLSRRKKGESPFTECSGILKVGDVEILKENFTTPLTAITK--------------------------------------------------------QKK

Query:  LQKEGYAIPSSRAGLGYNPPEPVRITRKW--KVVDAHHITVEEMGDPEDKKNDDSQKISVFDRIKAPTTRLSVHQRLKYSSSKKEGQSKTSTPTRCSVFQ
        L +EG+AIP SR GLGY PPEP+RITRK   KVVD++HITV+E+ D  ++K  DSQ+ S FDR+     R  V +RL    ++++    TS+  R S FQ
Subjt:  LQKEGYAIPSSRAGLGYNPPEPVRITRKW--KVVDAHHITVEEMGDPEDKKNDDSQKISVFDRIKAPTTRLSVHQRLKYSSSKKEGQSKTSTPTRCSVFQ

Query:  RLSVS
        RL+++
Subjt:  RLSVS

TYJ98225.1 uncharacterized protein E5676_scaffold180G001270 [Cucumis melo var. makuwa]1.8e-3837.54Show/hide
Query:  EDIPEIVACHAVNTCEEGDSSSSPSQNAKKESIEEIDACEVQSKETSAHPAKSKAPKEE-------ASSNVPILRYVPLSRRKKGESPFTECSGILKVGD
        ED+ EI++     T  +G   +       K+S  + DA   Q         K +AP+ E         SN P+LRY+PLSRRKKGESPFTECS  L V +
Subjt:  EDIPEIVACHAVNTCEEGDSSSSPSQNAKKESIEEIDACEVQSKETSAHPAKSKAPKEE-------ASSNVPILRYVPLSRRKKGESPFTECSGILKVGD

Query:  VEILKENFTTPLTAITK------------------------------------------------------------QKKLQKEGYAIPSSRAGLGYNPP
         EILKENFT PLT I K                                                            QKKLQK+GY+IP+SRAG+GY   
Subjt:  VEILKENFTTPLTAITK------------------------------------------------------------QKKLQKEGYAIPSSRAGLGYNPP

Query:  EPVRITRKW--KVVDAHHITVEEMGDPEDKKNDDSQKISVFDRIKAPTTRLSVHQRLKYSSSKKEGQSKTSTPTRCSVFQRLSVSTSKKVDEPP-----R
        EPVRIT K   KV +  HITVEE  D E+ K   SQ+ SVFDRI     R SV QR+  S +K   Q  T + TR S FQRL+ S  K     P     +
Subjt:  EPVRITRKW--KVVDAHHITVEEMGDPEDKKNDDSQKISVFDRIKAPTTRLSVHQRLKYSSSKKEGQSKTSTPTRCSVFQRLSVSTSKKVDEPP-----R

Query:  SVFNRLQATYGQCKGKLKSLEIDESDEMNDNNGFSSTVPSRMKRKPYVLINTEGALK
        S F RL  +  + + K      ++S  +  +    S  PSRMKRK +V +NTEG+LK
Subjt:  SVFNRLQATYGQCKGKLKSLEIDESDEMNDNNGFSSTVPSRMKRKPYVLINTEGALK

TYJ98225.1 uncharacterized protein E5676_scaffold180G001270 [Cucumis melo var. makuwa]2.1e-1040.34Show/hide
Query:  QDQLESVENEDEGWTLVTRRKKQKKHYVQREPHMFRNYRRKNMSQKQKRKIKGLRKPKLVVEENQDFVMSRQPVTLKDFFPKNFLNDDHEDIPEIVACHA
        +++ + V+N +EGWTLVTRRKK+K+ + Q+E   +R YR K  SQ++  + K  RK   ++EE++     R+P+ LKDFFPKNF         EIV+CH 
Subjt:  QDQLESVENEDEGWTLVTRRKKQKKHYVQREPHMFRNYRRKNMSQKQKRKIKGLRKPKLVVEENQDFVMSRQPVTLKDFFPKNFLNDDHEDIPEIVACHA

Query:  VNTCEEGDSSSSPSQNAKK
         +T EE    S+  +   K
Subjt:  VNTCEEGDSSSSPSQNAKK

TYJ98225.1 uncharacterized protein E5676_scaffold180G001270 [Cucumis melo var. makuwa]9.2e-0639.05Show/hide
Query:  IATAEDLMLGKFISSSQQPN-ETSSPDVMSVMMTDAGTSEERMAEVEKKISMLLKMVQEKDQEIASLRNQMESRDVAESKICQDQLESVENEDEGWTLVT
        I   E+  + +  S S++ N E   P++MSVM+TD  TSE+RM  +EKK++M +K V+E+D EIA L+N +ESRD AES        +++N ++G  ++ 
Subjt:  IATAEDLMLGKFISSSQQPN-ETSSPDVMSVMMTDAGTSEERMAEVEKKISMLLKMVQEKDQEIASLRNQMESRDVAESKICQDQLESVENEDEGWTLVT

Query:  RRKKQ
          + Q
Subjt:  RRKKQ

TYJ98225.1 uncharacterized protein E5676_scaffold180G001270 [Cucumis melo var. makuwa]1.8e-3837.54Show/hide
Query:  EDIPEIVACHAVNTCEEGDSSSSPSQNAKKESIEEIDACEVQSKETSAHPAKSKAPKEE-------ASSNVPILRYVPLSRRKKGESPFTECSGILKVGD
        ED+ EI++     T  +G   +       K+S  + DA   Q         K +AP+ E         SN P+LRY+PLSRRKKGESPFTECS  L V +
Subjt:  EDIPEIVACHAVNTCEEGDSSSSPSQNAKKESIEEIDACEVQSKETSAHPAKSKAPKEE-------ASSNVPILRYVPLSRRKKGESPFTECSGILKVGD

Query:  VEILKENFTTPLTAITK------------------------------------------------------------QKKLQKEGYAIPSSRAGLGYNPP
         EILKENFT PLT I K                                                            QKKLQK+GY+IP+SRAG+GY   
Subjt:  VEILKENFTTPLTAITK------------------------------------------------------------QKKLQKEGYAIPSSRAGLGYNPP

Query:  EPVRITRKW--KVVDAHHITVEEMGDPEDKKNDDSQKISVFDRIKAPTTRLSVHQRLKYSSSKKEGQSKTSTPTRCSVFQRLSVSTSKKVDEPP-----R
        EPVRIT K   KV +  HITVEE  D E+ K   SQ+ SVFDRI     R SV QR+  S +K   Q  T + TR S FQRL+ S  K     P     +
Subjt:  EPVRITRKW--KVVDAHHITVEEMGDPEDKKNDDSQKISVFDRIKAPTTRLSVHQRLKYSSSKKEGQSKTSTPTRCSVFQRLSVSTSKKVDEPP-----R

Query:  SVFNRLQATYGQCKGKLKSLEIDESDEMNDNNGFSSTVPSRMKRKPYVLINTEGALK
        S F RL  +  + + K      ++S  +  +    S  PSRMKRK +V +NTEG+LK
Subjt:  SVFNRLQATYGQCKGKLKSLEIDESDEMNDNNGFSSTVPSRMKRKPYVLINTEGALK

TYK05005.1 ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa]2.6e-4027.07Show/hide
Query:  EKKISMLLKMVQEKDQEIASLRNQMESRDVAESKICQDQLESVENEDEGWTLVTRRKKQKKHYVQREPHMFRNYRRKNMSQKQKRKIKGLRKPKLVVEEN
        EKKI + L+     +  +     ++   D       Q++   +E +DE WT+VTRRKK+K   +Q+E   +RNYRR N +QK K+K K  RK KL+ +E+
Subjt:  EKKISMLLKMVQEKDQEIASLRNQMESRDVAESKICQDQLESVENEDEGWTLVTRRKKQKKHYVQREPHMFRNYRRKNMSQKQKRKIKGLRKPKLVVEEN

Query:  QDFVMSRQPVTLKDFFPKNFLNDDHEDIPEIVACHAVNTCEEG---------------------------------------------------------
        +DF  +++ +TL DFFP  FL D  ++ P +VACHA+N  EE                                                          
Subjt:  QDFVMSRQPVTLKDFFPKNFLNDDHEDIPEIVACHAVNTCEEG---------------------------------------------------------

Query:  ----------------------------------------------------------------------------------------DSSSSPSQNA--
                                                                                                ++ S+P   A  
Subjt:  ----------------------------------------------------------------------------------------DSSSSPSQNA--

Query:  ---------KKESIEEIDACEV----------------------------QSKETSAHPAKSKAPKEEASSNVPILRYVPLSRRKKGESPFTECSGILKV
                 K +S  E+ + EV                            +  E S   AKS    +E +SN  ILRYVPLSRRKKGESPF E    LKV
Subjt:  ---------KKESIEEIDACEV----------------------------QSKETSAHPAKSKAPKEEASSNVPILRYVPLSRRKKGESPFTECSGILKV

Query:  GDVEILKENFTTPLTAITK--------------------------------------------------------QKKLQKEGYAIPSSRAGLGYNPPEP
        GD+E+LKE+FTTPLT ITK                                                        QKKL +EG+AIP SR GLGY  PEP
Subjt:  GDVEILKENFTTPLTAITK--------------------------------------------------------QKKLQKEGYAIPSSRAGLGYNPPEP

Query:  VRITRKW--KVVDAHHITVEEMGDPEDKKNDDSQKISVFDRIKAPTTRLSVHQRLKYSSSKKEGQSKTSTPTRCSVFQRLSVSTSKKVDEPPRSVFNRL-
        +RITRK   K+VD++HITV+E+ D   +K  DSQ+ S FDRI     R  V +RL  + ++++    TS   R S F+RLS++  K    P   + NRL 
Subjt:  VRITRKW--KVVDAHHITVEEMGDPEDKKNDDSQKISVFDRIKAPTTRLSVHQRLKYSSSKKEGQSKTSTPTRCSVFQRLSVSTSKKVDEPPRSVFNRL-

Query:  ------------------QATYGQCKGKLKSLEIDESD------EMNDNNGFSSTVPSRMKRKPYVLIN-TEGALK
                            +      ++K + ++         E+       S VPSRMKRK +V +N ++G+LK
Subjt:  ------------------QATYGQCKGKLKSLEIDESD------EMNDNNGFSSTVPSRMKRKPYVLIN-TEGALK

TYK18071.1 uncharacterized protein E5676_scaffold306G004020 [Cucumis melo var. makuwa]2.1e-1040.34Show/hide
Query:  QDQLESVENEDEGWTLVTRRKKQKKHYVQREPHMFRNYRRKNMSQKQKRKIKGLRKPKLVVEENQDFVMSRQPVTLKDFFPKNFLNDDHEDIPEIVACHA
        +++ + V+N +EGWTLVTRRKK+K+ + Q+E   +R YR K  SQ++  + K  RK   ++EE++     R+P+ LKDFFPKNF         EIV+CH 
Subjt:  QDQLESVENEDEGWTLVTRRKKQKKHYVQREPHMFRNYRRKNMSQKQKRKIKGLRKPKLVVEENQDFVMSRQPVTLKDFFPKNFLNDDHEDIPEIVACHA

Query:  VNTCEEGDSSSSPSQNAKK
         +T EE    S+  +   K
Subjt:  VNTCEEGDSSSSPSQNAKK

TYK18071.1 uncharacterized protein E5676_scaffold306G004020 [Cucumis melo var. makuwa]4.9e-0745.24Show/hide
Query:  ETSSPDVMSVMMTDAGTSEERMAEVEKKISMLLKMVQEKDQEIASLRNQMESRDVAESKICQDQLESVENEDEGWTLVTRRKKQ
        E S P++MSVM+TD  TSE+RMAE+EKK++ML+K V+E+D  IA  +N +ESRD AES       ++++N ++G  ++   + Q
Subjt:  ETSSPDVMSVMMTDAGTSEERMAEVEKKISMLLKMVQEKDQEIASLRNQMESRDVAESKICQDQLESVENEDEGWTLVTRRKKQ

TrEMBL top hitse value%identityAlignment
A0A5A7TZU9 Ribonuclease H8.9e-3937.54Show/hide
Query:  EDIPEIVACHAVNTCEEGDSSSSPSQNAKKESIEEIDACEVQSKETSAHPAKSKAPKEE-------ASSNVPILRYVPLSRRKKGESPFTECSGILKVGD
        ED+ EI++     T  +G   +       K+S  + DA   Q         K +AP+ E         SN P+LRY+PLSRRKKGESPFTECS  L V +
Subjt:  EDIPEIVACHAVNTCEEGDSSSSPSQNAKKESIEEIDACEVQSKETSAHPAKSKAPKEE-------ASSNVPILRYVPLSRRKKGESPFTECSGILKVGD

Query:  VEILKENFTTPLTAITK------------------------------------------------------------QKKLQKEGYAIPSSRAGLGYNPP
         EILKENFT PLT I K                                                            QKKLQK+GY+IP+SRAG+GY   
Subjt:  VEILKENFTTPLTAITK------------------------------------------------------------QKKLQKEGYAIPSSRAGLGYNPP

Query:  EPVRITRKW--KVVDAHHITVEEMGDPEDKKNDDSQKISVFDRIKAPTTRLSVHQRLKYSSSKKEGQSKTSTPTRCSVFQRLSVSTSKKVDEPP-----R
        EPVRIT K   KV +  HITVEE  D E+ K   SQ+ SVFDRI     R SV QR+  S +K   Q  T + TR S FQRL+ S  K     P     +
Subjt:  EPVRITRKW--KVVDAHHITVEEMGDPEDKKNDDSQKISVFDRIKAPTTRLSVHQRLKYSSSKKEGQSKTSTPTRCSVFQRLSVSTSKKVDEPP-----R

Query:  SVFNRLQATYGQCKGKLKSLEIDESDEMNDNNGFSSTVPSRMKRKPYVLINTEGALK
        S F RL  +  + + K      ++S  +  +    S  PSRMKRK +V +NTEG+LK
Subjt:  SVFNRLQATYGQCKGKLKSLEIDESDEMNDNNGFSSTVPSRMKRKPYVLINTEGALK

A0A5A7TZU9 Ribonuclease H1.0e-1040.34Show/hide
Query:  QDQLESVENEDEGWTLVTRRKKQKKHYVQREPHMFRNYRRKNMSQKQKRKIKGLRKPKLVVEENQDFVMSRQPVTLKDFFPKNFLNDDHEDIPEIVACHA
        +++ + V+N +EGWTLVTRRKK+K+ + Q+E   +R YR K  SQ++  + K  RK   ++EE++     R+P+ LKDFFPKNF         EIV+CH 
Subjt:  QDQLESVENEDEGWTLVTRRKKQKKHYVQREPHMFRNYRRKNMSQKQKRKIKGLRKPKLVVEENQDFVMSRQPVTLKDFFPKNFLNDDHEDIPEIVACHA

Query:  VNTCEEGDSSSSPSQNAKK
         +T EE    S+  +   K
Subjt:  VNTCEEGDSSSSPSQNAKK

A0A5A7TZU9 Ribonuclease H8.9e-0729.74Show/hide
Query:  IATAEDLMLGKFISSSQQPN-ETSSPDVMSVMMTDAGTSEERMAEVEKKISMLLKMVQEKDQEIASLRNQMESRDVAESKICQDQLESVENEDEGWTLVT
        I   E+  + +  S S++ N E   P++MSVM+TD  TSE+RMAE+EKK++ML+K V+E+D EIA L+N +ESRD AES        +++N ++G  ++ 
Subjt:  IATAEDLMLGKFISSSQQPN-ETSSPDVMSVMMTDAGTSEERMAEVEKKISMLLKMVQEKDQEIASLRNQMESRDVAESKICQDQLESVENEDEGWTLVT

Query:  RRKKQKKHYVQREPHMFRNYRRKNMSQKQKRKIKGLRKPKLVVEENQDFVMSRQPVTLK--------DFFPKNFLNDDHEDIPEIVACHAVNTCE
          + Q    +             ++S +Q +++             Q F +  +P T +         + P  F   D +  P+    H + TCE
Subjt:  RRKKQKKHYVQREPHMFRNYRRKNMSQKQKRKIKGLRKPKLVVEENQDFVMSRQPVTLK--------DFFPKNFLNDDHEDIPEIVACHAVNTCE

A0A5A7TZU9 Ribonuclease H8.9e-3937.54Show/hide
Query:  EDIPEIVACHAVNTCEEGDSSSSPSQNAKKESIEEIDACEVQSKETSAHPAKSKAPKEE-------ASSNVPILRYVPLSRRKKGESPFTECSGILKVGD
        ED+ EI++     T  +G   +       K+S  + DA   Q         K +AP+ E         SN P+LRY+PLSRRKKGESPFTECS  L V +
Subjt:  EDIPEIVACHAVNTCEEGDSSSSPSQNAKKESIEEIDACEVQSKETSAHPAKSKAPKEE-------ASSNVPILRYVPLSRRKKGESPFTECSGILKVGD

Query:  VEILKENFTTPLTAITK------------------------------------------------------------QKKLQKEGYAIPSSRAGLGYNPP
         EILKENFT PLT I K                                                            QKKLQK+GY+IP+SRAG+GY   
Subjt:  VEILKENFTTPLTAITK------------------------------------------------------------QKKLQKEGYAIPSSRAGLGYNPP

Query:  EPVRITRKW--KVVDAHHITVEEMGDPEDKKNDDSQKISVFDRIKAPTTRLSVHQRLKYSSSKKEGQSKTSTPTRCSVFQRLSVSTSKKVDEPP-----R
        EPVRIT K   KV +  HITVEE  D E+ K   SQ+ SVFDRI     R SV QR+  S +K   Q  T + TR S FQRL+ S  K     P     +
Subjt:  EPVRITRKW--KVVDAHHITVEEMGDPEDKKNDDSQKISVFDRIKAPTTRLSVHQRLKYSSSKKEGQSKTSTPTRCSVFQRLSVSTSKKVDEPP-----R

Query:  SVFNRLQATYGQCKGKLKSLEIDESDEMNDNNGFSSTVPSRMKRKPYVLINTEGALK
        S F RL  +  + + K      ++S  +  +    S  PSRMKRK +V +NTEG+LK
Subjt:  SVFNRLQATYGQCKGKLKSLEIDESDEMNDNNGFSSTVPSRMKRKPYVLINTEGALK

A0A5D3BIH8 Uncharacterized protein1.0e-1040.34Show/hide
Query:  QDQLESVENEDEGWTLVTRRKKQKKHYVQREPHMFRNYRRKNMSQKQKRKIKGLRKPKLVVEENQDFVMSRQPVTLKDFFPKNFLNDDHEDIPEIVACHA
        +++ + V+N +EGWTLVTRRKK+K+ + Q+E   +R YR K  SQ++  + K  RK   ++EE++     R+P+ LKDFFPKNF         EIV+CH 
Subjt:  QDQLESVENEDEGWTLVTRRKKQKKHYVQREPHMFRNYRRKNMSQKQKRKIKGLRKPKLVVEENQDFVMSRQPVTLKDFFPKNFLNDDHEDIPEIVACHA

Query:  VNTCEEGDSSSSPSQNAKK
         +T EE    S+  +   K
Subjt:  VNTCEEGDSSSSPSQNAKK

A0A5D3BIH8 Uncharacterized protein4.4e-0639.05Show/hide
Query:  IATAEDLMLGKFISSSQQPN-ETSSPDVMSVMMTDAGTSEERMAEVEKKISMLLKMVQEKDQEIASLRNQMESRDVAESKICQDQLESVENEDEGWTLVT
        I   E+  + +  S S++ N E   P++MSVM+TD  TSE+RM  +EKK++M +K V+E+D EIA L+N +ESRD AES        +++N ++G  ++ 
Subjt:  IATAEDLMLGKFISSSQQPN-ETSSPDVMSVMMTDAGTSEERMAEVEKKISMLLKMVQEKDQEIASLRNQMESRDVAESKICQDQLESVENEDEGWTLVT

Query:  RRKKQ
          + Q
Subjt:  RRKKQ

A0A5D3BIH8 Uncharacterized protein8.9e-3937.54Show/hide
Query:  EDIPEIVACHAVNTCEEGDSSSSPSQNAKKESIEEIDACEVQSKETSAHPAKSKAPKEE-------ASSNVPILRYVPLSRRKKGESPFTECSGILKVGD
        ED+ EI++     T  +G   +       K+S  + DA   Q         K +AP+ E         SN P+LRY+PLSRRKKGESPFTECS  L V +
Subjt:  EDIPEIVACHAVNTCEEGDSSSSPSQNAKKESIEEIDACEVQSKETSAHPAKSKAPKEE-------ASSNVPILRYVPLSRRKKGESPFTECSGILKVGD

Query:  VEILKENFTTPLTAITK------------------------------------------------------------QKKLQKEGYAIPSSRAGLGYNPP
         EILKENFT PLT I K                                                            QKKLQK+GY+IP+SRAG+GY   
Subjt:  VEILKENFTTPLTAITK------------------------------------------------------------QKKLQKEGYAIPSSRAGLGYNPP

Query:  EPVRITRKW--KVVDAHHITVEEMGDPEDKKNDDSQKISVFDRIKAPTTRLSVHQRLKYSSSKKEGQSKTSTPTRCSVFQRLSVSTSKKVDEPP-----R
        EPVRIT K   KV +  HITVEE  D E+ K   SQ+ SVFDRI     R SV QR+  S +K   Q  T + TR S FQRL+ S  K     P     +
Subjt:  EPVRITRKW--KVVDAHHITVEEMGDPEDKKNDDSQKISVFDRIKAPTTRLSVHQRLKYSSSKKEGQSKTSTPTRCSVFQRLSVSTSKKVDEPP-----R

Query:  SVFNRLQATYGQCKGKLKSLEIDESDEMNDNNGFSSTVPSRMKRKPYVLINTEGALK
        S F RL  +  + + K      ++S  +  +    S  PSRMKRK +V +NTEG+LK
Subjt:  SVFNRLQATYGQCKGKLKSLEIDESDEMNDNNGFSSTVPSRMKRKPYVLINTEGALK

A0A5D3BY54 Ty3-gypsy retrotransposon protein2.5e-4131.68Show/hide
Query:  MLLKMVQEKDQEIASLRNQMESRDVAESKICQDQLESVENEDEGWTLVTRRKKQKKHYVQREPHMFRNYRRKNMSQKQKRKIKGLRKPKLVVEENQDFVM
        ++L++ +EK  ++  L  ++   D       Q++   +E +DEGWT+VTRRKK+K   +Q+E  ++ NYRR N +QK K+K K  RK KLV E+++DF  
Subjt:  MLLKMVQEKDQEIASLRNQMESRDVAESKICQDQLESVENEDEGWTLVTRRKKQKKHYVQREPHMFRNYRRKNMSQKQKRKIKGLRKPKLVVEENQDFVM

Query:  SRQPVTLKDFFPKNFLNDDHEDIPEIVA-----------------CHAVNTCEEG----------------------------DSSSS------------
        +++ VTL DFFP  FL D  ++ P +VA                 C +++  +E                             D+ S+            
Subjt:  SRQPVTLKDFFPKNFLNDDHEDIPEIVA-----------------CHAVNTCEEG----------------------------DSSSS------------

Query:  --------------------------------------------PSQN----------AKKESIEEIDACEVQSKETSAHPAKSKAPKEEASSNVPILRY
                                                    P  N          A +ES +          E S   AKS    +E +SN PILRY
Subjt:  --------------------------------------------PSQN----------AKKESIEEIDACEVQSKETSAHPAKSKAPKEEASSNVPILRY

Query:  VPLSRRKKGESPFTECSGILKVGDVEILKENFTTPLTAITK--------------------------------------------------------QKK
        VPLSRRKKGESPF E    LKVGD+E+LKE+FTTPLT ITK                                                        QKK
Subjt:  VPLSRRKKGESPFTECSGILKVGDVEILKENFTTPLTAITK--------------------------------------------------------QKK

Query:  LQKEGYAIPSSRAGLGYNPPEPVRITRKW--KVVDAHHITVEEMGDPEDKKNDDSQKISVFDRIKAPTTRLSVHQRLKYSSSKKEGQSKTSTPTRCSVFQ
        L +EG+AIP SR GLGY PPEP+RITRK   KVVD++HITV+E+ D  ++K  DSQ+ S FDR+     R  V +RL    ++++    TS+  R S FQ
Subjt:  LQKEGYAIPSSRAGLGYNPPEPVRITRKW--KVVDAHHITVEEMGDPEDKKNDDSQKISVFDRIKAPTTRLSVHQRLKYSSSKKEGQSKTSTPTRCSVFQ

Query:  RLSVS
        RL+++
Subjt:  RLSVS

A0A5D3BY54 Ty3-gypsy retrotransposon protein5.8e-0638.98Show/hide
Query:  MLRRTTESAQLEIATAEDLMLGKFISSSQQPNETSSPDVMSVMMTDAGTSEERMAEVEKKISMLLKMVQEKDQEIASLRNQMESRDVAESKICQDQLESV
        +L++  ES +  I   E+ +     SSS +  + + PDVMSVMM D  T E  MAE+E+KI+ L+K V+E+D EI +LR QM +R+ AES     Q   V
Subjt:  MLRRTTESAQLEIATAEDLMLGKFISSSQQPNETSSPDVMSVMMTDAGTSEERMAEVEKKISMLLKMVQEKDQEIASLRNQMESRDVAESKICQDQLESV

Query:  ENEDEGWTLVTRRKKQKK
        +  D+G  +V   + Q++
Subjt:  ENEDEGWTLVTRRKKQKK

A0A5D3BY54 Ty3-gypsy retrotransposon protein1.2e-4027.07Show/hide
Query:  EKKISMLLKMVQEKDQEIASLRNQMESRDVAESKICQDQLESVENEDEGWTLVTRRKKQKKHYVQREPHMFRNYRRKNMSQKQKRKIKGLRKPKLVVEEN
        EKKI + L+     +  +     ++   D       Q++   +E +DE WT+VTRRKK+K   +Q+E   +RNYRR N +QK K+K K  RK KL+ +E+
Subjt:  EKKISMLLKMVQEKDQEIASLRNQMESRDVAESKICQDQLESVENEDEGWTLVTRRKKQKKHYVQREPHMFRNYRRKNMSQKQKRKIKGLRKPKLVVEEN

Query:  QDFVMSRQPVTLKDFFPKNFLNDDHEDIPEIVACHAVNTCEEG---------------------------------------------------------
        +DF  +++ +TL DFFP  FL D  ++ P +VACHA+N  EE                                                          
Subjt:  QDFVMSRQPVTLKDFFPKNFLNDDHEDIPEIVACHAVNTCEEG---------------------------------------------------------

Query:  ----------------------------------------------------------------------------------------DSSSSPSQNA--
                                                                                                ++ S+P   A  
Subjt:  ----------------------------------------------------------------------------------------DSSSSPSQNA--

Query:  ---------KKESIEEIDACEV----------------------------QSKETSAHPAKSKAPKEEASSNVPILRYVPLSRRKKGESPFTECSGILKV
                 K +S  E+ + EV                            +  E S   AKS    +E +SN  ILRYVPLSRRKKGESPF E    LKV
Subjt:  ---------KKESIEEIDACEV----------------------------QSKETSAHPAKSKAPKEEASSNVPILRYVPLSRRKKGESPFTECSGILKV

Query:  GDVEILKENFTTPLTAITK--------------------------------------------------------QKKLQKEGYAIPSSRAGLGYNPPEP
        GD+E+LKE+FTTPLT ITK                                                        QKKL +EG+AIP SR GLGY  PEP
Subjt:  GDVEILKENFTTPLTAITK--------------------------------------------------------QKKLQKEGYAIPSSRAGLGYNPPEP

Query:  VRITRKW--KVVDAHHITVEEMGDPEDKKNDDSQKISVFDRIKAPTTRLSVHQRLKYSSSKKEGQSKTSTPTRCSVFQRLSVSTSKKVDEPPRSVFNRL-
        +RITRK   K+VD++HITV+E+ D   +K  DSQ+ S FDRI     R  V +RL  + ++++    TS   R S F+RLS++  K    P   + NRL 
Subjt:  VRITRKW--KVVDAHHITVEEMGDPEDKKNDDSQKISVFDRIKAPTTRLSVHQRLKYSSSKKEGQSKTSTPTRCSVFQRLSVSTSKKVDEPPRSVFNRL-

Query:  ------------------QATYGQCKGKLKSLEIDESD------EMNDNNGFSSTVPSRMKRKPYVLIN-TEGALK
                            +      ++K + ++         E+       S VPSRMKRK +V +N ++G+LK
Subjt:  ------------------QATYGQCKGKLKSLEIDESD------EMNDNNGFSSTVPSRMKRKPYVLIN-TEGALK

A0A5D3D1E5 Ribonuclease H1.0e-1040.34Show/hide
Query:  QDQLESVENEDEGWTLVTRRKKQKKHYVQREPHMFRNYRRKNMSQKQKRKIKGLRKPKLVVEENQDFVMSRQPVTLKDFFPKNFLNDDHEDIPEIVACHA
        +++ + V+N +EGWTLVTRRKK+K+ + Q+E   +R YR K  SQ++  + K  RK   ++EE++     R+P+ LKDFFPKNF         EIV+CH 
Subjt:  QDQLESVENEDEGWTLVTRRKKQKKHYVQREPHMFRNYRRKNMSQKQKRKIKGLRKPKLVVEENQDFVMSRQPVTLKDFFPKNFLNDDHEDIPEIVACHA

Query:  VNTCEEGDSSSSPSQNAKK
         +T EE    S+  +   K
Subjt:  VNTCEEGDSSSSPSQNAKK

A0A5D3D1E5 Ribonuclease H2.4e-0745.24Show/hide
Query:  ETSSPDVMSVMMTDAGTSEERMAEVEKKISMLLKMVQEKDQEIASLRNQMESRDVAESKICQDQLESVENEDEGWTLVTRRKKQ
        E S P++MSVM+TD  TSE+RMAE+EKK++ML+K V+E+D  IA  +N +ESRD AES       ++++N ++G  ++   + Q
Subjt:  ETSSPDVMSVMMTDAGTSEERMAEVEKKISMLLKMVQEKDQEIASLRNQMESRDVAESKICQDQLESVENEDEGWTLVTRRKKQ

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTGAGACGCACGACAGAATCTGCTCAACTTGAAATCGCCACTGCAGAAGATCTGATGCTTGGCAAATTCATCTCTTCTTCTCAGCAACCAAACGAAACATCCAGTCC
TGATGTGATGTCTGTTATGATGACTGATGCTGGAACTAGTGAAGAACGAATGGCTGAAGTTGAGAAGAAAATCAGCATGCTACTGAAGATGGTCCAAGAGAAAGACCAAG
AAATCGCCTCTCTCAGGAACCAGATGGAAAGTCGGGATGTTGCTGAATCGAAAATCTGCCAAGACCAACTTGAGTCTGTTGAAAATGAAGACGAAGGATGGACTTTGGTA
ACTCGTCGAAAGAAGCAAAAGAAACATTACGTTCAAAGAGAGCCTCACATGTTCCGAAACTACAGGAGAAAGAACATGTCACAAAAACAGAAAAGAAAGATAAAAGGTTT
GAGAAAGCCTAAACTAGTTGTCGAAGAGAATCAAGATTTTGTTATGTCTCGACAACCAGTGACCCTTAAAGATTTCTTCCCGAAGAACTTTCTTAATGACGATCATGAGG
ACATCCCTGAGATAGTCGCATGTCATGCTGTCAATACGTGCGAAGAAGGCGATTCTTCCTCAAGTCCATCTCAGAATGCGAAGAAGGAGTCGATCGAAGAAATAGATGCT
TGTGAAGTTCAATCAAAGGAAACATCCGCTCACCCTGCAAAATCGAAAGCTCCAAAGGAAGAGGCATCGTCAAACGTCCCTATATTGCGCTACGTTCCTTTATCTCGACG
CAAGAAAGGGGAATCACCATTCACAGAATGTTCAGGAATTTTGAAGGTTGGTGATGTGGAGATTCTAAAAGAAAATTTCACCACGCCTCTGACAGCAATCACCAAGCAAA
AGAAGCTCCAGAAAGAAGGTTATGCCATACCATCCTCGAGAGCCGGACTAGGGTACAATCCCCCAGAGCCAGTTCGTATAACCAGAAAATGGAAAGTTGTAGATGCACAT
CATATAACAGTAGAAGAGATGGGCGATCCAGAAGATAAAAAGAATGATGATAGCCAGAAAATCTCTGTCTTCGATCGCATTAAAGCGCCGACTACTCGTCTTTCAGTTCA
TCAGCGGCTGAAATATTCATCTTCGAAAAAGGAAGGTCAAAGCAAAACTTCTACTCCTACCCGATGTTCAGTGTTTCAGCGTTTGAGTGTGTCTACATCGAAGAAAGTAG
ATGAACCGCCGAGATCCGTGTTCAATCGCCTTCAAGCAACCTATGGCCAATGCAAGGGAAAGTTGAAGAGTCTTGAAATAGATGAATCCGACGAGATGAATGACAACAAC
GGATTTTCCAGTACTGTTCCTTCACGGATGAAGAGAAAACCTTATGTTCTCATAAATACAGAAGGTGCTTTAAAA
mRNA sequenceShow/hide mRNA sequence
ATGCTGAGACGCACGACAGAATCTGCTCAACTTGAAATCGCCACTGCAGAAGATCTGATGCTTGGCAAATTCATCTCTTCTTCTCAGCAACCAAACGAAACATCCAGTCC
TGATGTGATGTCTGTTATGATGACTGATGCTGGAACTAGTGAAGAACGAATGGCTGAAGTTGAGAAGAAAATCAGCATGCTACTGAAGATGGTCCAAGAGAAAGACCAAG
AAATCGCCTCTCTCAGGAACCAGATGGAAAGTCGGGATGTTGCTGAATCGAAAATCTGCCAAGACCAACTTGAGTCTGTTGAAAATGAAGACGAAGGATGGACTTTGGTA
ACTCGTCGAAAGAAGCAAAAGAAACATTACGTTCAAAGAGAGCCTCACATGTTCCGAAACTACAGGAGAAAGAACATGTCACAAAAACAGAAAAGAAAGATAAAAGGTTT
GAGAAAGCCTAAACTAGTTGTCGAAGAGAATCAAGATTTTGTTATGTCTCGACAACCAGTGACCCTTAAAGATTTCTTCCCGAAGAACTTTCTTAATGACGATCATGAGG
ACATCCCTGAGATAGTCGCATGTCATGCTGTCAATACGTGCGAAGAAGGCGATTCTTCCTCAAGTCCATCTCAGAATGCGAAGAAGGAGTCGATCGAAGAAATAGATGCT
TGTGAAGTTCAATCAAAGGAAACATCCGCTCACCCTGCAAAATCGAAAGCTCCAAAGGAAGAGGCATCGTCAAACGTCCCTATATTGCGCTACGTTCCTTTATCTCGACG
CAAGAAAGGGGAATCACCATTCACAGAATGTTCAGGAATTTTGAAGGTTGGTGATGTGGAGATTCTAAAAGAAAATTTCACCACGCCTCTGACAGCAATCACCAAGCAAA
AGAAGCTCCAGAAAGAAGGTTATGCCATACCATCCTCGAGAGCCGGACTAGGGTACAATCCCCCAGAGCCAGTTCGTATAACCAGAAAATGGAAAGTTGTAGATGCACAT
CATATAACAGTAGAAGAGATGGGCGATCCAGAAGATAAAAAGAATGATGATAGCCAGAAAATCTCTGTCTTCGATCGCATTAAAGCGCCGACTACTCGTCTTTCAGTTCA
TCAGCGGCTGAAATATTCATCTTCGAAAAAGGAAGGTCAAAGCAAAACTTCTACTCCTACCCGATGTTCAGTGTTTCAGCGTTTGAGTGTGTCTACATCGAAGAAAGTAG
ATGAACCGCCGAGATCCGTGTTCAATCGCCTTCAAGCAACCTATGGCCAATGCAAGGGAAAGTTGAAGAGTCTTGAAATAGATGAATCCGACGAGATGAATGACAACAAC
GGATTTTCCAGTACTGTTCCTTCACGGATGAAGAGAAAACCTTATGTTCTCATAAATACAGAAGGTGCTTTAAAA
Protein sequenceShow/hide protein sequence
MLRRTTESAQLEIATAEDLMLGKFISSSQQPNETSSPDVMSVMMTDAGTSEERMAEVEKKISMLLKMVQEKDQEIASLRNQMESRDVAESKICQDQLESVENEDEGWTLV
TRRKKQKKHYVQREPHMFRNYRRKNMSQKQKRKIKGLRKPKLVVEENQDFVMSRQPVTLKDFFPKNFLNDDHEDIPEIVACHAVNTCEEGDSSSSPSQNAKKESIEEIDA
CEVQSKETSAHPAKSKAPKEEASSNVPILRYVPLSRRKKGESPFTECSGILKVGDVEILKENFTTPLTAITKQKKLQKEGYAIPSSRAGLGYNPPEPVRITRKWKVVDAH
HITVEEMGDPEDKKNDDSQKISVFDRIKAPTTRLSVHQRLKYSSSKKEGQSKTSTPTRCSVFQRLSVSTSKKVDEPPRSVFNRLQATYGQCKGKLKSLEIDESDEMNDNN
GFSSTVPSRMKRKPYVLINTEGALK