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Spg027864 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg027864
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionPectinesterase
Genome locationscaffold2:38232810..38233824
RNA-Seq ExpressionSpg027864
SyntenySpg027864
Gene Ontology termsGO:0042545 - cell wall modification (biological process)
GO:0045490 - pectin catabolic process (biological process)
GO:0005576 - extracellular region (cellular component)
GO:0030599 - pectinesterase activity (molecular function)
GO:0045330 - aspartyl esterase activity (molecular function)
InterPro domainsIPR000070 - Pectinesterase, catalytic
IPR011050 - Pectin lyase fold/virulence factor
IPR012334 - Pectin lyase fold


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022148123.1 probable pectinesterase/pectinesterase inhibitor 39 [Momordica charantia]6.3e-2259.22Show/hide
Query:  LKVIVLSFLEISRCLV-FKATVSKDGTGDFVRVGDVIAAAPNFSSSRFYIHVKVSFYKEHVEILEEKTFISLIGDNTSNTGIIDDRNNHDDSSTTTSATF
        L  ++L  +E S CL+ F ATVS DG+GD+V + D IAAAPN  S RFYIHVK   YKEH+E+ E KTFISLIGD+ S T I+DDR+NH   STT+SATF
Subjt:  LKVIVLSFLEISRCLV-FKATVSKDGTGDFVRVGDVIAAAPNFSSSRFYIHVKVSFYKEHVEILEEKTFISLIGDNTSNTGIIDDRNNHDDSSTTTSATF

Query:  SAR
        + +
Subjt:  SAR

XP_022150325.1 probable pectinesterase/pectinesterase inhibitor 44 [Momordica charantia]5.0e-1957.43Show/hide
Query:  SLKVIVLSFLEISRCLVFKATVSKDGTGDFVRVGDVIAAAPNFSSSRFYIHVKVSFYKEHVEILEEKTFISLIGDNTSNTGIIDDRNNHDDSSTTTSATF
        +L VI+  F+E S    F  TVS DG G+F RV D IAAAPNFS+SRFYIHVK   Y EHVE+  +KTFI+LIGD+ S T I+D+R+N    ST TSAT 
Subjt:  SLKVIVLSFLEISRCLVFKATVSKDGTGDFVRVGDVIAAAPNFSSSRFYIHVKVSFYKEHVEILEEKTFISLIGDNTSNTGIIDDRNNHDDSSTTTSATF

Query:  S
        +
Subjt:  S

XP_022150332.1 probable pectinesterase/pectinesterase inhibitor 39 [Momordica charantia]1.4e-2152.89Show/hide
Query:  SLKVIVLSFLEISRCLVFKATVSKDGTGDFVRVGDVIAAAPNFSSSRFYIHVKVSFYKEHVEILEEKTFISLIGDNTSNTGIIDDRNNHDDSSTTTSAT-
        SL V++  F++ S C +F ATVS DG+G+FVRV D IAAAPNFS++RFYIHVK   YKEHVE+  +KTFI+LIG++ S T I+D+R+N    ST T+AT 
Subjt:  SLKVIVLSFLEISRCLVFKATVSKDGTGDFVRVGDVIAAAPNFSSSRFYIHVKVSFYKEHVEILEEKTFISLIGDNTSNTGIIDDRNNHDDSSTTTSAT-

Query:  ------FSARFHMDVKPAETK
              F A+F      AE K
Subjt:  ------FSARFHMDVKPAETK

XP_022951717.1 probable pectinesterase/pectinesterase inhibitor 39 [Cucurbita moschata]6.6e-1951.49Show/hide
Query:  SLKVIVLSFLEISRCLVFKATVSKDGTGDFVRVGDVIAAAPNFSSSRFYIHVKVSFYKEHVEILEEKTFISLIGDNTSNTGIIDDRNNHDDSSTTTSATF
        +L +++L FL+ S    F +TVS DGTG+FV++ D I AAPNF+++RFYIH+K   Y EH+E+  +KTFISLIGDN S T I+D+R+     ST+ SAT 
Subjt:  SLKVIVLSFLEISRCLVFKATVSKDGTGDFVRVGDVIAAAPNFSSSRFYIHVKVSFYKEHVEILEEKTFISLIGDNTSNTGIIDDRNNHDDSSTTTSATF

Query:  S
        +
Subjt:  S

XP_023002625.1 probable pectinesterase/pectinesterase inhibitor 39 [Cucurbita maxima]2.9e-1952.48Show/hide
Query:  SLKVIVLSFLEISRCLVFKATVSKDGTGDFVRVGDVIAAAPNFSSSRFYIHVKVSFYKEHVEILEEKTFISLIGDNTSNTGIIDDRNNHDDSSTTTSATF
        +L +++L FL+ S    F +TVS DGTG+FV++ D I AAPNF+++RFYIH+K   Y EH+EI  +KTFISLIGDN S T I+D+R+     ST  SAT 
Subjt:  SLKVIVLSFLEISRCLVFKATVSKDGTGDFVRVGDVIAAAPNFSSSRFYIHVKVSFYKEHVEILEEKTFISLIGDNTSNTGIIDDRNNHDDSSTTTSATF

Query:  S
        +
Subjt:  S

TrEMBL top hitse value%identityAlignment
A0A6J1D381 Pectinesterase3.1e-2259.22Show/hide
Query:  LKVIVLSFLEISRCLV-FKATVSKDGTGDFVRVGDVIAAAPNFSSSRFYIHVKVSFYKEHVEILEEKTFISLIGDNTSNTGIIDDRNNHDDSSTTTSATF
        L  ++L  +E S CL+ F ATVS DG+GD+V + D IAAAPN  S RFYIHVK   YKEH+E+ E KTFISLIGD+ S T I+DDR+NH   STT+SATF
Subjt:  LKVIVLSFLEISRCLV-FKATVSKDGTGDFVRVGDVIAAAPNFSSSRFYIHVKVSFYKEHVEILEEKTFISLIGDNTSNTGIIDDRNNHDDSSTTTSATF

Query:  SAR
        + +
Subjt:  SAR

A0A6J1D863 Pectinesterase2.4e-1957.43Show/hide
Query:  SLKVIVLSFLEISRCLVFKATVSKDGTGDFVRVGDVIAAAPNFSSSRFYIHVKVSFYKEHVEILEEKTFISLIGDNTSNTGIIDDRNNHDDSSTTTSATF
        +L VI+  F+E S    F  TVS DG G+F RV D IAAAPNFS+SRFYIHVK   Y EHVE+  +KTFI+LIGD+ S T I+D+R+N    ST TSAT 
Subjt:  SLKVIVLSFLEISRCLVFKATVSKDGTGDFVRVGDVIAAAPNFSSSRFYIHVKVSFYKEHVEILEEKTFISLIGDNTSNTGIIDDRNNHDDSSTTTSATF

Query:  S
        +
Subjt:  S

A0A6J1DAG5 Pectinesterase6.8e-2252.89Show/hide
Query:  SLKVIVLSFLEISRCLVFKATVSKDGTGDFVRVGDVIAAAPNFSSSRFYIHVKVSFYKEHVEILEEKTFISLIGDNTSNTGIIDDRNNHDDSSTTTSAT-
        SL V++  F++ S C +F ATVS DG+G+FVRV D IAAAPNFS++RFYIHVK   YKEHVE+  +KTFI+LIG++ S T I+D+R+N    ST T+AT 
Subjt:  SLKVIVLSFLEISRCLVFKATVSKDGTGDFVRVGDVIAAAPNFSSSRFYIHVKVSFYKEHVEILEEKTFISLIGDNTSNTGIIDDRNNHDDSSTTTSAT-

Query:  ------FSARFHMDVKPAETK
              F A+F      AE K
Subjt:  ------FSARFHMDVKPAETK

A0A6J1GIG0 Pectinesterase3.2e-1951.49Show/hide
Query:  SLKVIVLSFLEISRCLVFKATVSKDGTGDFVRVGDVIAAAPNFSSSRFYIHVKVSFYKEHVEILEEKTFISLIGDNTSNTGIIDDRNNHDDSSTTTSATF
        +L +++L FL+ S    F +TVS DGTG+FV++ D I AAPNF+++RFYIH+K   Y EH+E+  +KTFISLIGDN S T I+D+R+     ST+ SAT 
Subjt:  SLKVIVLSFLEISRCLVFKATVSKDGTGDFVRVGDVIAAAPNFSSSRFYIHVKVSFYKEHVEILEEKTFISLIGDNTSNTGIIDDRNNHDDSSTTTSATF

Query:  S
        +
Subjt:  S

A0A6J1KPG6 Pectinesterase1.4e-1952.48Show/hide
Query:  SLKVIVLSFLEISRCLVFKATVSKDGTGDFVRVGDVIAAAPNFSSSRFYIHVKVSFYKEHVEILEEKTFISLIGDNTSNTGIIDDRNNHDDSSTTTSATF
        +L +++L FL+ S    F +TVS DGTG+FV++ D I AAPNF+++RFYIH+K   Y EH+EI  +KTFISLIGDN S T I+D+R+     ST  SAT 
Subjt:  SLKVIVLSFLEISRCLVFKATVSKDGTGDFVRVGDVIAAAPNFSSSRFYIHVKVSFYKEHVEILEEKTFISLIGDNTSNTGIIDDRNNHDDSSTTTSATF

Query:  S
        +
Subjt:  S

SwissProt top hitse value%identityAlignment
O49006 Pectinesterase/pectinesterase inhibitor 31.3e-0943.37Show/hide
Query:  ATVSKDGTGDFVRVGDVIAAAPNFSSSRFYIHVKVSFYKEHVEILEEKTFISLIGDNTSNTGIIDDRNNHDDSSTTTSATFSA
        ATV+ DG+G F  V   +AAAP  S+ R+ IH+K   Y+E+VE+ ++K  I  +GD  + T I   RN  D S+T  SAT +A
Subjt:  ATVSKDGTGDFVRVGDVIAAAPNFSSSRFYIHVKVSFYKEHVEILEEKTFISLIGDNTSNTGIIDDRNNHDDSSTTTSATFSA

P14280 Pectinesterase 14.9e-0939.08Show/hide
Query:  LVFKATVSKDGTGDFVRVGDVIAAAPNFSSSRFYIHVKVSFYKEHVEILEEKTFISLIGDNTSNTGIIDDRNNHDDSSTTTSATFSA
        ++  A V++DGTGD+  + + +AAAP+ S +R+ I+VK   YKE+VE+   K  + ++GD    T I    N  D S+T  SAT +A
Subjt:  LVFKATVSKDGTGDFVRVGDVIAAAPNFSSSRFYIHVKVSFYKEHVEILEEKTFISLIGDNTSNTGIIDDRNNHDDSSTTTSATFSA

Q42534 Pectinesterase 21.1e-1146.99Show/hide
Query:  ATVSKDGTGDFVRVGDVIAAAPNFSSSRFYIHVKVSFYKEHVEILEEKTFISLIGDNTSNTGIIDDRNNHDDSSTTTSATFSA
        ATV+ DG+GDF  V   +AAAP  S+ RF IH+K   Y+E+VE+ ++KT I  +GD    T I   RN  D S+T  SAT +A
Subjt:  ATVSKDGTGDFVRVGDVIAAAPNFSSSRFYIHVKVSFYKEHVEILEEKTFISLIGDNTSNTGIIDDRNNHDDSSTTTSATFSA

Q43062 Pectinesterase/pectinesterase inhibitor PPE8B6.4e-0942.68Show/hide
Query:  ATVSKDGTGDFVRVGDVIAAAPNFSSSRFYIHVKVSFYKEHVEILEEKTFISLIGDNTSNTGIIDDRNNHDDSSTTTSATFS
        A V++DGTG+F  V D + AAP++S  R+ I++K   YKE+VEI ++K  + +IGD    T I  +R+  D  +T  SATF+
Subjt:  ATVSKDGTGDFVRVGDVIAAAPNFSSSRFYIHVKVSFYKEHVEILEEKTFISLIGDNTSNTGIIDDRNNHDDSSTTTSATFS

Q9LXK7 Probable pectinesterase/pectinesterase inhibitor 325.8e-1040.22Show/hide
Query:  LEISRCLVFKATVSKDGTGDFVRVGDVIAAAPNFSSSRFYIHVKVSFYKEHVEILEEKTFISLIGDNTSNTGIIDDRNNHDDSSTTTSATFS
        L+     V  A V+ DGTG+F  + D + AAP++S+ R+ IHVK   Y E+VEI ++K  I ++GD    T I  +R+  D  +T  SATF+
Subjt:  LEISRCLVFKATVSKDGTGDFVRVGDVIAAAPNFSSSRFYIHVKVSFYKEHVEILEEKTFISLIGDNTSNTGIIDDRNNHDDSSTTTSATFS

Arabidopsis top hitse value%identityAlignment
AT1G53830.1 pectin methylesterase 27.5e-1346.99Show/hide
Query:  ATVSKDGTGDFVRVGDVIAAAPNFSSSRFYIHVKVSFYKEHVEILEEKTFISLIGDNTSNTGIIDDRNNHDDSSTTTSATFSA
        ATV+ DG+GDF  V   +AAAP  S+ RF IH+K   Y+E+VE+ ++KT I  +GD    T I   RN  D S+T  SAT +A
Subjt:  ATVSKDGTGDFVRVGDVIAAAPNFSSSRFYIHVKVSFYKEHVEILEEKTFISLIGDNTSNTGIIDDRNNHDDSSTTTSATFSA

AT3G14310.1 pectin methylesterase 39.2e-1143.37Show/hide
Query:  ATVSKDGTGDFVRVGDVIAAAPNFSSSRFYIHVKVSFYKEHVEILEEKTFISLIGDNTSNTGIIDDRNNHDDSSTTTSATFSA
        ATV+ DG+G F  V   +AAAP  S+ R+ IH+K   Y+E+VE+ ++K  I  +GD  + T I   RN  D S+T  SAT +A
Subjt:  ATVSKDGTGDFVRVGDVIAAAPNFSSSRFYIHVKVSFYKEHVEILEEKTFISLIGDNTSNTGIIDDRNNHDDSSTTTSATFSA

AT3G43270.1 Plant invertase/pectin methylesterase inhibitor superfamily4.1e-1140.22Show/hide
Query:  LEISRCLVFKATVSKDGTGDFVRVGDVIAAAPNFSSSRFYIHVKVSFYKEHVEILEEKTFISLIGDNTSNTGIIDDRNNHDDSSTTTSATFS
        L+     V  A V+ DGTG+F  + D + AAP++S+ R+ IHVK   Y E+VEI ++K  I ++GD    T I  +R+  D  +T  SATF+
Subjt:  LEISRCLVFKATVSKDGTGDFVRVGDVIAAAPNFSSSRFYIHVKVSFYKEHVEILEEKTFISLIGDNTSNTGIIDDRNNHDDSSTTTSATFS

AT4G02320.1 Plant invertase/pectin methylesterase inhibitor superfamily7.8e-1041.46Show/hide
Query:  VSKDGTGDFVRVGDVIAAAPNFSSSRFYIHVKVSFYKEHVEILEEKTFISLIGDNTSNTGIIDDRNNHDDSSTTTSATFSAR
        V+++GTG++  +G+ I+AAPN S +RF I++K   Y E++EI  EKT I  IGD    T I  +R+  D  +   SAT   R
Subjt:  VSKDGTGDFVRVGDVIAAAPNFSSSRFYIHVKVSFYKEHVEILEEKTFISLIGDNTSNTGIIDDRNNHDDSSTTTSATFSAR

AT4G33220.1 pectin methylesterase 447.8e-1040.48Show/hide
Query:  FKATVSKDGTGDFVRVGDVIAAAPNFSSSRFYIHVKVSFYKEHVEILEEKTFISLIGDNTSNTGIIDDRNNHDDSSTTTSATFS
        +  +V+ DGTG+F ++ D I  AP++SS+RF I++K   Y E+VEI ++K  I ++GD    T I  +R+  D  +T  SATF+
Subjt:  FKATVSKDGTGDFVRVGDVIAAAPNFSSSRFYIHVKVSFYKEHVEILEEKTFISLIGDNTSNTGIIDDRNNHDDSSTTTSATFS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCTTCCTTAAAAGTTATAGTCCTTTCTTTCTTGGAGATCTCACGATGCCTTGTTTTCAAGGCAACCGTGTCCAAAGACGGAACTGGTGACTTTGTTCGAGTAGGTGA
CGTCATTGCTGCAGCACCGAACTTTAGTTCTAGTCGGTTTTACATCCATGTAAAAGTCAGCTTCTATAAGGAACATGTGGAGATACTAGAAGAAAAGACTTTTATAAGTC
TGATTGGAGACAATACATCCAACACGGGGATCATCGATGATCGAAACAATCATGACGACTCTTCAACTACAACTTCAGCTACCTTTAGTGCCCGCTTTCACATGGATGTA
AAACCGGCTGAAACTAAAGCTTGGTGCCGCAGCAATGACATTGCCTACTCGAACAAAATCGCCGGTTCCGTCTTTGGATACGGTTGCCTTGAAAACAAGGCACTGTAG
mRNA sequenceShow/hide mRNA sequence
ATGTCTTCCTTAAAAGTTATAGTCCTTTCTTTCTTGGAGATCTCACGATGCCTTGTTTTCAAGGCAACCGTGTCCAAAGACGGAACTGGTGACTTTGTTCGAGTAGGTGA
CGTCATTGCTGCAGCACCGAACTTTAGTTCTAGTCGGTTTTACATCCATGTAAAAGTCAGCTTCTATAAGGAACATGTGGAGATACTAGAAGAAAAGACTTTTATAAGTC
TGATTGGAGACAATACATCCAACACGGGGATCATCGATGATCGAAACAATCATGACGACTCTTCAACTACAACTTCAGCTACCTTTAGTGCCCGCTTTCACATGGATGTA
AAACCGGCTGAAACTAAAGCTTGGTGCCGCAGCAATGACATTGCCTACTCGAACAAAATCGCCGGTTCCGTCTTTGGATACGGTTGCCTTGAAAACAAGGCACTGTAG
Protein sequenceShow/hide protein sequence
MSSLKVIVLSFLEISRCLVFKATVSKDGTGDFVRVGDVIAAAPNFSSSRFYIHVKVSFYKEHVEILEEKTFISLIGDNTSNTGIIDDRNNHDDSSTTTSATFSARFHMDV
KPAETKAWCRSNDIAYSNKIAGSVFGYGCLENKAL