CuGenDBv2

Gene ID	Spg027907
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	DNA excision repair protein ERCC-1
Genome location	scaffold2:38125411..38130638
RNA-Seq Expression	Spg027907
Synteny	Spg027907
Gene Ontology terms	GO:0000710 - meiotic mismatch repair (biological process) GO:0006296 - nucleotide-excision repair, DNA incision, 5'-to lesion (biological process) GO:0006312 - mitotic recombination (biological process) GO:0070914 - UV-damage excision repair (biological process) GO:0000110 - nucleotide-excision repair factor 1 complex (cellular component) GO:0070522 - ERCC4-ERCC1 complex (cellular component) GO:0003684 - damaged DNA binding (molecular function) GO:0003697 - single-stranded DNA binding (molecular function) GO:0004518 - nuclease activity (molecular function)
InterPro domains	IPR004579 - ERCC1/RAD10/SWI10 family IPR010994 - RuvA domain 2-like IPR011335 - Restriction endonuclease type II-like

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAG6590378.1 DNA excision repair protein ERCC-1, partial [Cucurbita argyrosperma subsp. sororia]

3.7e-138

91.91

Show/hide

Query:  RGNPLLKHIRNVRWTFADVVPDYLVGQSSCALYLSLRYHLLHPDYLYYRIKELQKNFKLRVVLCHVDVEDVVKPLLEVTKTALLHDCTLLCAWSLEECGR
        RGNPLLKHIRNVRWTFADVVPDYL+G SSCALYLSLRYHLLHPDYLYYRI+ELQKNFKLRVVLCHVDVEDVVKPLLEVTKTALLHDCTLLCAWSLEECGR
Subjt:  RGNPLLKHIRNVRWTFADVVPDYLVGQSSCALYLSLRYHLLHPDYLYYRIKELQKNFKLRVVLCHVDVEDVVKPLLEVTKTALLHDCTLLCAWSLEECGR

Query:  YLETIKVYENKPADIIQGQMDTDYLSRLTHVLTSVRHVNKTDVVTLGTTFGSLSHIMDASMEDLARCPGIGERKVRRLYDTFHEPFKRVVSTHPAVPETP
        YLETIKVYENKPAD+IQGQMDTDYLSRLTHVLTSVRHVNKTDVVTLGTTFGSLSH+MDASMEDLARCPGIGERKVRRLYDT+HEPFKRVVSTHPAV ETP
Subjt:  YLETIKVYENKPADIIQGQMDTDYLSRLTHVLTSVRHVNKTDVVTLGTTFGSLSHIMDASMEDLARCPGIGERKVRRLYDTFHEPFKRVVSTHPAVPETP

Query:  TQNNTEPRSMGEEQDVDGKRTEDASKHKKEPNLNVKSALSAAFAKYADKIGKSSSSRPQGEDKEEPESSNLQ
        TQNNTEPRS+GEEQDVDGK TEDAS+HKKEP LN+KSALSAAFAKY+ KIGK  SS+P+GE+K EPE+SN Q
Subjt:  TQNNTEPRSMGEEQDVDGKRTEDASKHKKEPNLNVKSALSAAFAKYADKIGKSSSSRPQGEDKEEPESSNLQ

KAG7023940.1 DNA excision repair protein ERCC-1 [Cucurbita argyrosperma subsp. argyrosperma]

1.7e-138

92.28

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Query:  RGNPLLKHIRNVRWTFADVVPDYLVGQSSCALYLSLRYHLLHPDYLYYRIKELQKNFKLRVVLCHVDVEDVVKPLLEVTKTALLHDCTLLCAWSLEECGR
        RGNPLLKHIRNVRWTFADVVPDYL+G SSCALYLSLRYHLLHPDYLYYRI+ELQKNFKLRVVLCHVDVEDVVKPLLEVTKTALLHDCTLLCAWSLEECGR
Subjt:  RGNPLLKHIRNVRWTFADVVPDYLVGQSSCALYLSLRYHLLHPDYLYYRIKELQKNFKLRVVLCHVDVEDVVKPLLEVTKTALLHDCTLLCAWSLEECGR

Query:  YLETIKVYENKPADIIQGQMDTDYLSRLTHVLTSVRHVNKTDVVTLGTTFGSLSHIMDASMEDLARCPGIGERKVRRLYDTFHEPFKRVVSTHPAVPETP
        YLETIKVYENKPAD+IQGQMDTDYLSRLTHVLTSVRHVNKTDVVTLGTTFGSLSH+MDASMEDLARCPGIGERKVRRLYDTFHEPFKRVVSTHPAV ETP
Subjt:  YLETIKVYENKPADIIQGQMDTDYLSRLTHVLTSVRHVNKTDVVTLGTTFGSLSHIMDASMEDLARCPGIGERKVRRLYDTFHEPFKRVVSTHPAVPETP

Query:  TQNNTEPRSMGEEQDVDGKRTEDASKHKKEPNLNVKSALSAAFAKYADKIGKSSSSRPQGEDKEEPESSNLQ
        TQNNTEPRS+GEEQDVDGK TEDAS+HKKEP LN+KSALSAAFAKY+ KIGK  SS+P+GE+K EPE+SN Q
Subjt:  TQNNTEPRSMGEEQDVDGKRTEDASKHKKEPNLNVKSALSAAFAKYADKIGKSSSSRPQGEDKEEPESSNLQ

TYK02347.1 DNA excision repair protein ERCC-1 [Cucumis melo var. makuwa]

3.7e-138

83.39

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Query:  RGNPLLKHIRNVRWTFADVVPDYLVGQSSCALYLSLRYHLLHPDYLYYRIKELQKNFKLRVVLCHVDVEDVVKPLLEVTKTALLHDCTLLCAWSLEECGR
        +GNPLLKHIRNVRW FADVVPDYL+GQSSCALYLSLRYHLLHPDYLYYRI+ELQKNFKLRVVLCHVDVEDVVKPLLEVTKTALLHDCTLLCAWSLEECGR
Subjt:  RGNPLLKHIRNVRWTFADVVPDYLVGQSSCALYLSLRYHLLHPDYLYYRIKELQKNFKLRVVLCHVDVEDVVKPLLEVTKTALLHDCTLLCAWSLEECGR

Query:  YLETIKVYENKPADIIQGQMDTDYLSRLTHVLTSVRHVNKTDVVTLGTTFGSLSHIMDASMEDLARCPGIGERKVRRLYDTFHEPFKRVVSTHPAVPETP
        YLETIKVYENKPAD+IQGQMDTDYLSRLTHVLTSVRHVNKTDVVTLGTTFGSLSHIMDASMEDLARCPGIGERKVRRLYDTFHEPFKR+VSTHPAVPETP
Subjt:  YLETIKVYENKPADIIQGQMDTDYLSRLTHVLTSVRHVNKTDVVTLGTTFGSLSHIMDASMEDLARCPGIGERKVRRLYDTFHEPFKRVVSTHPAVPETP

Query:  TQNNTEPRSMGEEQDVDGKR-TEDASKHKKEPNLNVKSALSAAFAKYADKIGKSSSSRPQGEDKEEPESSNLQ---ENDHLL--HPSECNPNLLVFCLRK
        TQN+T+PRS+ EEQDVDGKR  ED S+HKKEP LNVKSALSAAFAKYADKI K SSS PQ ++  EPES  +    E DH+     ++  P  +VF  R 
Subjt:  TQNNTEPRSMGEEQDVDGKR-TEDASKHKKEPNLNVKSALSAAFAKYADKIGKSSSSRPQGEDKEEPESSNLQ---ENDHLL--HPSECNPNLLVFCLRK

Query:  WLCCQSECRIGSD
         LCC+ E R GSD
Subjt:  WLCCQSECRIGSD

XP_023516191.1 DNA excision repair protein ERCC-1 isoform X1 [Cucurbita pepo subsp. pepo]

2.2e-138

91.91

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Query:  RGNPLLKHIRNVRWTFADVVPDYLVGQSSCALYLSLRYHLLHPDYLYYRIKELQKNFKLRVVLCHVDVEDVVKPLLEVTKTALLHDCTLLCAWSLEECGR
        RGNPLLKHIRNVRWTFADVVPDYL+G SSCALYLSLRYHLLHPDYLYYRI+ELQKNFKLRVVLCHVDVEDVVKPLLEVTKTALLHDCTLLCAWSLEECGR
Subjt:  RGNPLLKHIRNVRWTFADVVPDYLVGQSSCALYLSLRYHLLHPDYLYYRIKELQKNFKLRVVLCHVDVEDVVKPLLEVTKTALLHDCTLLCAWSLEECGR

Query:  YLETIKVYENKPADIIQGQMDTDYLSRLTHVLTSVRHVNKTDVVTLGTTFGSLSHIMDASMEDLARCPGIGERKVRRLYDTFHEPFKRVVSTHPAVPETP
        YLETIKVYENKPAD+IQGQMDTDYLSRLTHVLTSVRHVNKTDVVTLGTTFGSLSH+MDASMEDLARCPGIGERKVRRLYDTFHEPFKRV+STHPAV ETP
Subjt:  YLETIKVYENKPADIIQGQMDTDYLSRLTHVLTSVRHVNKTDVVTLGTTFGSLSHIMDASMEDLARCPGIGERKVRRLYDTFHEPFKRVVSTHPAVPETP

Query:  TQNNTEPRSMGEEQDVDGKRTEDASKHKKEPNLNVKSALSAAFAKYADKIGKSSSSRPQGEDKEEPESSNLQ
        TQNNTEPRS+GEEQDVDGK TEDAS+HKKEP LN+KSALSAAFAKY+ KIGK  SS+P+GE+K EPE+SN Q
Subjt:  TQNNTEPRSMGEEQDVDGKRTEDASKHKKEPNLNVKSALSAAFAKYADKIGKSSSSRPQGEDKEEPESSNLQ

XP_038884592.1 DNA excision repair protein ERCC-1 isoform X1 [Benincasa hispida]

9.7e-139

91.18

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Query:  RGNPLLKHIRNVRWTFADVVPDYLVGQSSCALYLSLRYHLLHPDYLYYRIKELQKNFKLRVVLCHVDVEDVVKPLLEVTKTALLHDCTLLCAWSLEECGR
        +GNPLLKH+RNVRW FADVVPDYL+GQSSCALYLSLRYHLLHPDYLYYRI+ELQKNFKLRVVLCHVDVEDVVKPLLEVTKTALLHDCTLLCAWSLEECGR
Subjt:  RGNPLLKHIRNVRWTFADVVPDYLVGQSSCALYLSLRYHLLHPDYLYYRIKELQKNFKLRVVLCHVDVEDVVKPLLEVTKTALLHDCTLLCAWSLEECGR

Query:  YLETIKVYENKPADIIQGQMDTDYLSRLTHVLTSVRHVNKTDVVTLGTTFGSLSHIMDASMEDLARCPGIGERKVRRLYDTFHEPFKRVVSTHPAVPETP
        YLETIKVYENKPAD+IQGQMDTDYLSRLTHVLTSVRHVNKTDVVTLGTTFGSLSHIMDASMEDLARCPGIGERKVRRLYDTFHEPFKR+VSTHP  PETP
Subjt:  YLETIKVYENKPADIIQGQMDTDYLSRLTHVLTSVRHVNKTDVVTLGTTFGSLSHIMDASMEDLARCPGIGERKVRRLYDTFHEPFKRVVSTHPAVPETP

Query:  TQNNTEPRSMGEEQDVDGKRTEDASKHKKEPNLNVKSALSAAFAKYADKIGKSSSSRPQGEDKEEPESSNLQ
        TQNNT+PRSM EEQDVD KRTED S+HKKEP LN+KSALSAAFAKYADKIGK + S P+GE++ EPESSNLQ
Subjt:  TQNNTEPRSMGEEQDVDGKRTEDASKHKKEPNLNVKSALSAAFAKYADKIGKSSSSRPQGEDKEEPESSNLQ

TrEMBL top hits

e value

%identity

Alignment

A0A1S3CIE0 DNA excision repair protein ERCC-1

1.7e-136

91.21

Show/hide

Query:  RGNPLLKHIRNVRWTFADVVPDYLVGQSSCALYLSLRYHLLHPDYLYYRIKELQKNFKLRVVLCHVDVEDVVKPLLEVTKTALLHDCTLLCAWSLEECGR
        +GNPLLKHIRNVRW FADVVPDYL+GQSSCALYLSLRYHLLHPDYLYYRI+ELQKNFKLRVVLCHVDVEDVVKPLLEVTKTALLHDCTLLCAWSLEECGR
Subjt:  RGNPLLKHIRNVRWTFADVVPDYLVGQSSCALYLSLRYHLLHPDYLYYRIKELQKNFKLRVVLCHVDVEDVVKPLLEVTKTALLHDCTLLCAWSLEECGR

Query:  YLETIKVYENKPADIIQGQMDTDYLSRLTHVLTSVRHVNKTDVVTLGTTFGSLSHIMDASMEDLARCPGIGERKVRRLYDTFHEPFKRVVSTHPAVPETP
        YLETIKVYENKPAD+IQGQMDTDYLSRLTHVLTSVRHVNKTDVVTLGTTFGSLSHIMDASMEDLARCPGIGERKVRRLYDTFHEPFKR+VSTHPAVPETP
Subjt:  YLETIKVYENKPADIIQGQMDTDYLSRLTHVLTSVRHVNKTDVVTLGTTFGSLSHIMDASMEDLARCPGIGERKVRRLYDTFHEPFKRVVSTHPAVPETP

Query:  TQNNTEPRSMGEEQDVDGKR-TEDASKHKKEPNLNVKSALSAAFAKYADKIGKSSSSRPQGEDKEEPESSNLQ
        TQN+T+PRS+ EEQDVDGKR  ED S+HKKEP LNVKSALSAAFAKYADKI K SSS PQ ++  EPESSN+Q
Subjt:  TQNNTEPRSMGEEQDVDGKR-TEDASKHKKEPNLNVKSALSAAFAKYADKIGKSSSSRPQGEDKEEPESSNLQ

A0A5A7T0A2 DNA excision repair protein ERCC-1

4.4e-137

83.12

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Query:  RGNPLLKHIRNVRWTFADVVPDYLVGQSSCALYLSLRYHLLHPDYLYYRIKELQKNFKLRVVLCHVDVEDVVKPLLEVTKTALLHDCTLLCAWSLEECGR
        +GNPLLKHIRNVRW FADVVPDYL+GQSSCALYLSLRYHLLHPDYLYYRI+ELQKNFKLRVVLCHVDVEDVVKPLLEVTKTALLHDCTLLCAWSLEECGR
Subjt:  RGNPLLKHIRNVRWTFADVVPDYLVGQSSCALYLSLRYHLLHPDYLYYRIKELQKNFKLRVVLCHVDVEDVVKPLLEVTKTALLHDCTLLCAWSLEECGR

Query:  YLETIKVYENKPADIIQGQMDTDYLSRLTHVLTSVRHVNKTDVVTLGTTFGSLSHIMDASMEDLARCPGIGERK-VRRLYDTFHEPFKRVVSTHPAVPET
        YLETIKVYENKPAD+IQGQMDTDYLSRLTHVLTSVRHVNKTDVVTLGTTFGSLSHIMDASMEDLARCPGIGERK VRRLYDTFHEPFKR+VSTHPAVPET
Subjt:  YLETIKVYENKPADIIQGQMDTDYLSRLTHVLTSVRHVNKTDVVTLGTTFGSLSHIMDASMEDLARCPGIGERK-VRRLYDTFHEPFKRVVSTHPAVPET

Query:  PTQNNTEPRSMGEEQDVDGKR-TEDASKHKKEPNLNVKSALSAAFAKYADKIGKSSSSRPQGEDKEEPESSNLQ---ENDHLL--HPSECNPNLLVFCLR
        PTQN+T+PRS+ EEQDVDGKR  ED S+HKKEP LNVKSALSAAFAKYADKI K SSS PQ ++  EPES  +    E DH+     ++  P  +VF  R
Subjt:  PTQNNTEPRSMGEEQDVDGKR-TEDASKHKKEPNLNVKSALSAAFAKYADKIGKSSSSRPQGEDKEEPESSNLQ---ENDHLL--HPSECNPNLLVFCLR

Query:  KWLCCQSECRIGSD
          LCC+ E R GSD
Subjt:  KWLCCQSECRIGSD

A0A5D3BSF5 DNA excision repair protein ERCC-1

1.8e-138

83.39

Show/hide

Query:  RGNPLLKHIRNVRWTFADVVPDYLVGQSSCALYLSLRYHLLHPDYLYYRIKELQKNFKLRVVLCHVDVEDVVKPLLEVTKTALLHDCTLLCAWSLEECGR
        +GNPLLKHIRNVRW FADVVPDYL+GQSSCALYLSLRYHLLHPDYLYYRI+ELQKNFKLRVVLCHVDVEDVVKPLLEVTKTALLHDCTLLCAWSLEECGR
Subjt:  RGNPLLKHIRNVRWTFADVVPDYLVGQSSCALYLSLRYHLLHPDYLYYRIKELQKNFKLRVVLCHVDVEDVVKPLLEVTKTALLHDCTLLCAWSLEECGR

Query:  YLETIKVYENKPADIIQGQMDTDYLSRLTHVLTSVRHVNKTDVVTLGTTFGSLSHIMDASMEDLARCPGIGERKVRRLYDTFHEPFKRVVSTHPAVPETP
        YLETIKVYENKPAD+IQGQMDTDYLSRLTHVLTSVRHVNKTDVVTLGTTFGSLSHIMDASMEDLARCPGIGERKVRRLYDTFHEPFKR+VSTHPAVPETP
Subjt:  YLETIKVYENKPADIIQGQMDTDYLSRLTHVLTSVRHVNKTDVVTLGTTFGSLSHIMDASMEDLARCPGIGERKVRRLYDTFHEPFKRVVSTHPAVPETP

Query:  TQNNTEPRSMGEEQDVDGKR-TEDASKHKKEPNLNVKSALSAAFAKYADKIGKSSSSRPQGEDKEEPESSNLQ---ENDHLL--HPSECNPNLLVFCLRK
        TQN+T+PRS+ EEQDVDGKR  ED S+HKKEP LNVKSALSAAFAKYADKI K SSS PQ ++  EPES  +    E DH+     ++  P  +VF  R 
Subjt:  TQNNTEPRSMGEEQDVDGKR-TEDASKHKKEPNLNVKSALSAAFAKYADKIGKSSSSRPQGEDKEEPESSNLQ---ENDHLL--HPSECNPNLLVFCLRK

Query:  WLCCQSECRIGSD
         LCC+ E R GSD
Subjt:  WLCCQSECRIGSD

A0A6J1HED7 DNA excision repair protein ERCC-1 isoform X1

2.2e-136

90.81

Show/hide

Query:  RGNPLLKHIRNVRWTFADVVPDYLVGQSSCALYLSLRYHLLHPDYLYYRIKELQKNFKLRVVLCHVDVEDVVKPLLEVTKTALLHDCTLLCAWSLEECGR
        RGNPLLKHIRNVRWTFADVVPDYL+G SSCALYLSLRYHLLHPDYLYYRI+ELQKNFKLRVVLCHVDVEDVVKPLLEVTKTALLHDCTLLCAWSLEECGR
Subjt:  RGNPLLKHIRNVRWTFADVVPDYLVGQSSCALYLSLRYHLLHPDYLYYRIKELQKNFKLRVVLCHVDVEDVVKPLLEVTKTALLHDCTLLCAWSLEECGR

Query:  YLETIKVYENKPADIIQGQMDTDYLSRLTHVLTSVRHVNKTDVVTLGTTFGSLSHIMDASMEDLARCPGIGERKVRRLYDTFHEPFKRVVSTHPAVPETP
        YLETIKVYENKPAD+IQGQMDTDYLSRLTHVLTSVRHVNKTDVVTLGTTFGSLSH+MDASMEDLARCPGIGERKVRRLYDTFHEPFKRVVSTHP+V ETP
Subjt:  YLETIKVYENKPADIIQGQMDTDYLSRLTHVLTSVRHVNKTDVVTLGTTFGSLSHIMDASMEDLARCPGIGERKVRRLYDTFHEPFKRVVSTHPAVPETP

Query:  TQNNTEPRSMGEEQDVDGKRTEDASKHKKEPNLNVKSALSAAFAKYADKIGKSSSSRPQGEDKEEPESSNLQ
        TQN+TEPRS+ EEQDVDGK TEDAS+HKKEP L++KSALSAAFAKY+ KIGK  SS+P+GE+K EPE+SN Q
Subjt:  TQNNTEPRSMGEEQDVDGKRTEDASKHKKEPNLNVKSALSAAFAKYADKIGKSSSSRPQGEDKEEPESSNLQ

A0A6J1HYZ8 DNA excision repair protein ERCC-1 isoform X1

3.4e-137

91.54

Show/hide

Query:  RGNPLLKHIRNVRWTFADVVPDYLVGQSSCALYLSLRYHLLHPDYLYYRIKELQKNFKLRVVLCHVDVEDVVKPLLEVTKTALLHDCTLLCAWSLEECGR
        RGNPLLKHIRNVRWTFADVVPDYL+G+SSCALYLSLRYHLLHPDYLYYRI+ELQKNFKLRVVLCHVDVEDVVKPLLEVTKTALLHDCTLLCAWSLEECGR
Subjt:  RGNPLLKHIRNVRWTFADVVPDYLVGQSSCALYLSLRYHLLHPDYLYYRIKELQKNFKLRVVLCHVDVEDVVKPLLEVTKTALLHDCTLLCAWSLEECGR

Query:  YLETIKVYENKPADIIQGQMDTDYLSRLTHVLTSVRHVNKTDVVTLGTTFGSLSHIMDASMEDLARCPGIGERKVRRLYDTFHEPFKRVVSTHPAVPETP
        YLETIKVYENKPAD+IQGQMDTDYLSRLTHVLTSVRHVNKTDVVTLGTTFGSLSH+MDASMEDLARCPGIGERKVRRLYDTFHEPFKRVVSTHPAV ETP
Subjt:  YLETIKVYENKPADIIQGQMDTDYLSRLTHVLTSVRHVNKTDVVTLGTTFGSLSHIMDASMEDLARCPGIGERKVRRLYDTFHEPFKRVVSTHPAVPETP

Query:  TQNNTEPRSMGEEQDVDGKRTEDASKHKKEPNLNVKSALSAAFAKYADKIGKSSSSRPQGEDKEEPESSNLQ
        TQNNTEPR +GEEQDVDGK TEDAS+HKKEP LN+KSALSAAFAKY+ KIGK  SS+P+GE+KE  E+SN Q
Subjt:  TQNNTEPRSMGEEQDVDGKRTEDASKHKKEPNLNVKSALSAAFAKYADKIGKSSSSRPQGEDKEEPESSNLQ

SwissProt top hits

e value

%identity

Alignment

P07903 DNA excision repair protein ERCC-1

1.4e-60

57.67

Show/hide

Query:  RGNPLLKHIRNVRWTFADVVPDYLVGQSSCALYLSLRYHLLHPDYLYYRIKELQKNFKLRVVLCHVDVEDVVKPLLEVTKTALLHDCTLLCAWSLEECGR
        RGNP+LK +RNV W F +V+PDY++GQS+CAL+LSLRYH LHPDY++ R++ L KNF LRV+L  VDV+D  + L E+ K  +L DCTL+ AWS EE GR
Subjt:  RGNPLLKHIRNVRWTFADVVPDYLVGQSSCALYLSLRYHLLHPDYLYYRIKELQKNFKLRVVLCHVDVEDVVKPLLEVTKTALLHDCTLLCAWSLEECGR

Query:  YLETIKVYENKPADIIQGQMDTDYLSRLTHVLTSVRHVNKTDVVTLGTTFGSLSHIMDASMEDLARCPGIGERKVRRLYDTFHEPFKRV
        YLET K YE KPAD++  +++ ++LSR T  LT+V+ VNKTD  TL  TFGSL  +  AS EDLA CPG+G +K RRL++  HEPF +V
Subjt:  YLETIKVYENKPADIIQGQMDTDYLSRLTHVLTSVRHVNKTDVVTLGTTFGSLSHIMDASMEDLARCPGIGERKVRRLYDTFHEPFKRV

P07992 DNA excision repair protein ERCC-1

2.6e-62

59.26

Show/hide

Query:  RGNPLLKHIRNVRWTFADVVPDYLVGQSSCALYLSLRYHLLHPDYLYYRIKELQKNFKLRVVLCHVDVEDVVKPLLEVTKTALLHDCTLLCAWSLEECGR
        RGNP+LK +RNV W F DV+PDY++GQS+CAL+LSLRYH LHPDY++ R++ L KNF LRV+L  VDV+D  + L E+ K  +L DCTL+ AWS EE GR
Subjt:  RGNPLLKHIRNVRWTFADVVPDYLVGQSSCALYLSLRYHLLHPDYLYYRIKELQKNFKLRVVLCHVDVEDVVKPLLEVTKTALLHDCTLLCAWSLEECGR

Query:  YLETIKVYENKPADIIQGQMDTDYLSRLTHVLTSVRHVNKTDVVTLGTTFGSLSHIMDASMEDLARCPGIGERKVRRLYDTFHEPFKRV
        YLET K YE KPAD++  +++ D++SR+T  LT+V+ VNKTD  TL TTFGSL  ++ AS EDLA CPG+G +K RRL+D  HEPF +V
Subjt:  YLETIKVYENKPADIIQGQMDTDYLSRLTHVLTSVRHVNKTDVVTLGTTFGSLSHIMDASMEDLARCPGIGERKVRRLYDTFHEPFKRV

Q06182 Mating-type switching protein swi10

1.1e-44

45.7

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Query:  RGNPLLKHIRNVRWTFADVVPDYLVGQSSCALYLSLRYHLLHPDYLYYRIKELQKNFKLRVVLCHVDVEDVVKPLLEVTKTALLHDCTLLCAWSLEECGR
        +GNPLL H+RNV W + D+VPD+++G   C+L+LSL+YH LHP+Y+Y RI +L K++ LR++L  VDVE+    + E+ KT++++  TL+ AWS EE  R
Subjt:  RGNPLLKHIRNVRWTFADVVPDYLVGQSSCALYLSLRYHLLHPDYLYYRIKELQKNFKLRVVLCHVDVEDVVKPLLEVTKTALLHDCTLLCAWSLEECGR

Query:  YLETIKVYENKPADIIQGQMDTDYLSRLTHVLTSVRHVNKTDVVTLGTTFGSLSHIMDASMEDLARCPGIGERKVRRLYDTFHEPF
        YLET K YEN    +I  +  TDYLS++   LTS+R +NK+D ++L + FGSL   + AS ++L +  G G  KV R  +   +PF
Subjt:  YLETIKVYENKPADIIQGQMDTDYLSRLTHVLTSVRHVNKTDVVTLGTTFGSLSHIMDASMEDLARCPGIGERKVRRLYDTFHEPF

Q1LZ75 DNA excision repair protein ERCC-1

2.2e-61

57.67

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Query:  RGNPLLKHIRNVRWTFADVVPDYLVGQSSCALYLSLRYHLLHPDYLYYRIKELQKNFKLRVVLCHVDVEDVVKPLLEVTKTALLHDCTLLCAWSLEECGR
        RGNP+L+ +RNV W F DV+PDY++GQS+CAL+LSLRYH LHPDY++ R++ L K++ LRV+L  VDV+D  + L E+ K  +L DCTL+ AWS EE GR
Subjt:  RGNPLLKHIRNVRWTFADVVPDYLVGQSSCALYLSLRYHLLHPDYLYYRIKELQKNFKLRVVLCHVDVEDVVKPLLEVTKTALLHDCTLLCAWSLEECGR

Query:  YLETIKVYENKPADIIQGQMDTDYLSRLTHVLTSVRHVNKTDVVTLGTTFGSLSHIMDASMEDLARCPGIGERKVRRLYDTFHEPFKRV
        YLET K YE KPAD++  +++ D++SR+T  LT+V+ VNKTD  TL TTFGSL  ++ AS EDL+ CPG+G +K RRL+D FHEPF +V
Subjt:  YLETIKVYENKPADIIQGQMDTDYLSRLTHVLTSVRHVNKTDVVTLGTTFGSLSHIMDASMEDLARCPGIGERKVRRLYDTFHEPFKRV

Q9MA98 DNA excision repair protein ERCC-1

6.0e-107

71.59

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Query:  RGNPLLKHIRNVRWTFADVVPDYLVGQSSCALYLSLRYHLLHPDYLYYRIKELQKNFKLRVVLCHVDVEDVVKPLLEVTKTALLHDCTLLCAWSLEECGR
        +GNPLLKHIRNV+W F+D++PDY++GQ+SCALYLSLRYHLLHPDYLY+RI+ELQKNFKL VVLCHVDVED VKPLLEVTKTALLHDCTLLCAWS+ EC R
Subjt:  RGNPLLKHIRNVRWTFADVVPDYLVGQSSCALYLSLRYHLLHPDYLYYRIKELQKNFKLRVVLCHVDVEDVVKPLLEVTKTALLHDCTLLCAWSLEECGR

Query:  YLETIKVYENKPADIIQGQMDTDYLSRLTHVLTSVRHVNKTDVVTLGTTFGSLSHIMDASMEDLARCPGIGERKVRRLYDTFHEPFKRVVSTHPAVPETP
        YLETIKVYENKPAD+IQGQMDTDYLSRL H LTS+RHVNK+DVVTLG+TFGSL+HI+DASMEDLARCPGIGERKV+RLYDTFHEPFKR  S++P+V E P
Subjt:  YLETIKVYENKPADIIQGQMDTDYLSRLTHVLTSVRHVNKTDVVTLGTTFGSLSHIMDASMEDLARCPGIGERKVRRLYDTFHEPFKRVVSTHPAVPETP

Query:  TQNNTEPRSMGEEQDV--DGKRTEDASKHKK---EPNLNVKSALSAAFAKYADKIGKSSSSRPQ
               + +  E+ V  D    ED+ K KK   EP   VK+ALSA FA+Y+D++ K    + +
Subjt:  TQNNTEPRSMGEEQDV--DGKRTEDASKHKK---EPNLNVKSALSAAFAKYADKIGKSSSSRPQ

Arabidopsis top hits

e value

%identity

Alignment

AT3G05210.1 nucleotide repair protein, putative

4.2e-108

71.59

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Query:  RGNPLLKHIRNVRWTFADVVPDYLVGQSSCALYLSLRYHLLHPDYLYYRIKELQKNFKLRVVLCHVDVEDVVKPLLEVTKTALLHDCTLLCAWSLEECGR
        +GNPLLKHIRNV+W F+D++PDY++GQ+SCALYLSLRYHLLHPDYLY+RI+ELQKNFKL VVLCHVDVED VKPLLEVTKTALLHDCTLLCAWS+ EC R
Subjt:  RGNPLLKHIRNVRWTFADVVPDYLVGQSSCALYLSLRYHLLHPDYLYYRIKELQKNFKLRVVLCHVDVEDVVKPLLEVTKTALLHDCTLLCAWSLEECGR

Query:  YLETIKVYENKPADIIQGQMDTDYLSRLTHVLTSVRHVNKTDVVTLGTTFGSLSHIMDASMEDLARCPGIGERKVRRLYDTFHEPFKRVVSTHPAVPETP
        YLETIKVYENKPAD+IQGQMDTDYLSRL H LTS+RHVNK+DVVTLG+TFGSL+HI+DASMEDLARCPGIGERKV+RLYDTFHEPFKR  S++P+V E P
Subjt:  YLETIKVYENKPADIIQGQMDTDYLSRLTHVLTSVRHVNKTDVVTLGTTFGSLSHIMDASMEDLARCPGIGERKVRRLYDTFHEPFKRVVSTHPAVPETP

Query:  TQNNTEPRSMGEEQDV--DGKRTEDASKHKK---EPNLNVKSALSAAFAKYADKIGKSSSSRPQ
               + +  E+ V  D    ED+ K KK   EP   VK+ALSA FA+Y+D++ K    + +
Subjt:  TQNNTEPRSMGEEQDV--DGKRTEDASKHKK---EPNLNVKSALSAAFAKYADKIGKSSSSRPQ

Sequences

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CDS sequence

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ATGGCAAAGAAGCTAACCTACCAGGGATTACAGGTGGTCTTTGCTGCCATATTGGCTTTCTGTTTATTTTATGGAGAATTTTGCTCAAGACGAAAAACAGGATCTTTTAT
GAGGGGAAATCCCCTTCTCAAACACATCAGGAATGTGAGATGGACTTTTGCAGATGTTGTACCTGATTACTTAGTTGGGCAAAGCTCGTGTGCTCTCTATCTAAGTCTTC
GGTATCATCTATTGCATCCAGACTACTTGTATTACCGTATAAAAGAATTGCAAAAAAATTTCAAGCTTCGTGTTGTCTTGTGTCATGTTGATGTGGAAGATGTTGTCAAG
CCTTTACTTGAAGTCACTAAAACAGCTCTACTTCACGATTGTACCCTTCTATGTGCTTGGAGTTTGGAGGAGTGTGGTCGCTACTTGGAGACAATAAAAGTTTATGAAAA
CAAGCCCGCAGATATTATTCAAGGCCAGATGGACACTGACTATCTCTCACGGCTAACTCACGTCCTAACATCGGTTCGGCATGTTAACAAGACTGATGTGGTCACCCTTG
GAACAACGTTTGGGTCTCTGTCTCATATCATGGATGCATCCATGGAAGATCTAGCTCGTTGCCCTGGTATAGGTGAGCGCAAGGTAAGGCGGCTGTACGACACCTTTCAT
GAGCCATTCAAGCGTGTAGTTTCAACCCACCCTGCTGTTCCAGAAACTCCTACCCAGAATAATACCGAACCTCGCTCAATGGGTGAAGAACAAGATGTGGATGGGAAGAG
AACAGAAGATGCTAGCAAACACAAGAAAGAGCCCAACTTAAACGTCAAATCAGCTCTCTCTGCTGCTTTTGCTAAATATGCTGATAAAATTGGTAAAAGTAGTAGCAGCA
GGCCCCAAGGAGAGGACAAAGAAGAACCTGAAAGTAGCAACTTGCAAGAGAATGATCACTTGCTACATCCTTCAGAATGCAATCCAAATCTGCTCGTGTTCTGTTTAAGA
AAGTGGCTTTGCTGTCAGTCGGAATGCAGGATTGGAAGTGATGACCGAGTTTCGGGTACTCAGTTTTCGATAATCGACATACGTAAATTACATTTGCATCTCCTTTCTGT
AGCTGTAACTTTTCCTGGACAAGAAGCATGGTCTTTTTAG

mRNA sequence

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Protein sequence

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MAKKLTYQGLQVVFAAILAFCLFYGEFCSRRKTGSFMRGNPLLKHIRNVRWTFADVVPDYLVGQSSCALYLSLRYHLLHPDYLYYRIKELQKNFKLRVVLCHVDVEDVVK
PLLEVTKTALLHDCTLLCAWSLEECGRYLETIKVYENKPADIIQGQMDTDYLSRLTHVLTSVRHVNKTDVVTLGTTFGSLSHIMDASMEDLARCPGIGERKVRRLYDTFH
EPFKRVVSTHPAVPETPTQNNTEPRSMGEEQDVDGKRTEDASKHKKEPNLNVKSALSAAFAKYADKIGKSSSSRPQGEDKEEPESSNLQENDHLLHPSECNPNLLVFCLR
KWLCCQSECRIGSDDRVSGTQFSIIDIRKLHLHLLSVAVTFPGQEAWSF

Spg027907 (gene) of Sponge gourd (cylindrica) v1 genome