; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg027930 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg027930
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionReverse transcriptase domain-containing protein
Genome locationscaffold2:37756222..37758466
RNA-Seq ExpressionSpg027930
SyntenySpg027930
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8657620.1 Detected protein of unknown function [Hibiscus syriacus]8.6e-1029.75Show/hide
Query:  DDDFLNAVLLGVARPGAKWDDHGAAR-TLKSQLLDFEATCWMHWVKNRIMPTTHDATLSIQRVVLVYCIMKGILLDLGRILVDTLRQTAAKPKDAMFCPG
        D +  + VL  +     +W+    +R ++  + L   A  W H++K+++MPT+H+ T+S+  ++L++ IMK  L+D+GRI+V  +     K   A+  P 
Subjt:  DDDFLNAVLLGVARPGAKWDDHGAAR-TLKSQLLDFEATCWMHWVKNRIMPTTHDATLSIQRVVLVYCIMKGILLDLGRILVDTLRQTAAKPKDAMFCPG

Query:  LVTRLCHASGLLPAAYEEIRP
        L+T LC    +    ++EI P
Subjt:  LVTRLCHASGLLPAAYEEIRP

KAE8676815.1 hypothetical protein F3Y22_tig00111582pilonHSYRG01273 [Hibiscus syriacus]8.6e-1025.31Show/hide
Query:  LPQSMTDQISSRRWETVCENPRTYVPAL--VHDFYRAQCYLDDDFLNAVLLGVARPGAKWDDHGAAR-TLKSQLLDFEATCWMHWVKNRIMPTTHDATLS
        L   + D ++  +W+    +P +   +L  V    + +   D    + +L  +     +W+    +R ++  + L   A  W H++K+++MPT+H+ T+S
Subjt:  LPQSMTDQISSRRWETVCENPRTYVPAL--VHDFYRAQCYLDDDFLNAVLLGVARPGAKWDDHGAAR-TLKSQLLDFEATCWMHWVKNRIMPTTHDATLS

Query:  IQRVVLVYCIMKGILLDLGRILVDTLRQTAAKPKDAMFCPGLVTRLCHASGLLPAAYEEIRP
        + R++L++ IM    +D+GRI+V  +    +K   A+  P L+T LC    +   A++EI P
Subjt:  IQRVVLVYCIMKGILLDLGRILVDTLRQTAAKPKDAMFCPGLVTRLCHASGLLPAAYEEIRP

PIN01433.1 hypothetical protein CDL12_26059 [Handroanthus impetiginosus]2.5e-0934.62Show/hide
Query:  GAKWD-DHGAARTLKSQLLDFEATCWMHWVKNRIMPTTHDATLSIQRVVLVYCIMKGILLDLGRILVDTLRQTAAKPKDAMFCPGLVTRLCHASGLLPAA
        GA+W    G   + KS  LD  A  W+ ++  R++PT H   ++  R +L+YCIM G   D+G+I+ D++ Q+A   +D ++ P L+T+LC  +G+    
Subjt:  GAKWD-DHGAARTLKSQLLDFEATCWMHWVKNRIMPTTHDATLSIQRVVLVYCIMKGILLDLGRILVDTLRQTAAKPKDAMFCPGLVTRLCHASGLLPAA

Query:  YEEI
         EE+
Subjt:  YEEI

PON46472.1 hypothetical protein PanWU01x14_251180, partial [Parasponia andersonii]9.6e-0937.86Show/hide
Query:  LNAVLLGVARPGAKWD--DHGAARTLKSQLLDFEATCWMHWVKNRIMPTTHDATLSIQRVVLVYCIMKGILLDLGRILVDTLRQTAAKPKDAMFCPGLVT
        L  VL  VA  GA+W+    GA   ++S L    A  W H++K+R++PTTH  T+S  R++L++ ++ G  +++GR++   +R  AA+   A+F P L+T
Subjt:  LNAVLLGVARPGAKWD--DHGAARTLKSQLLDFEATCWMHWVKNRIMPTTHDATLSIQRVVLVYCIMKGILLDLGRILVDTLRQTAAKPKDAMFCPGLVT

Query:  RLC
        RLC
Subjt:  RLC

PON70375.1 hypothetical protein PanWU01x14_080440 [Parasponia andersonii]4.3e-0927.72Show/hide
Query:  PQSMTDQISSRRWETVCENPRTYVPALVHDFYRAQCYLDDDF---------------------------------------LNAVLLGVARPGAKWD--D
        P  + D I    W+  C +P   +  LV +FY      DDD                                        L  VL  VA  GA+W+   
Subjt:  PQSMTDQISSRRWETVCENPRTYVPALVHDFYRAQCYLDDDF---------------------------------------LNAVLLGVARPGAKWD--D

Query:  HGAARTLKSQLLDFEATCWMHWVKNRIMPTTHDATLSIQRVVLVYCIMKGILLDLGRILVDTLRQTAAKPKDAMFCPGLVTRLC
         GA   L+S  L+  A  W H++K+R++PTTH  T+S + V L+Y ++ G  +++GR++   +   AA+   A+F P L+T +C
Subjt:  HGAARTLKSQLLDFEATCWMHWVKNRIMPTTHDATLSIQRVVLVYCIMKGILLDLGRILVDTLRQTAAKPKDAMFCPGLVTRLC

TrEMBL top hitse value%identityAlignment
A0A2G9G807 Uncharacterized protein1.2e-0934.62Show/hide
Query:  GAKWD-DHGAARTLKSQLLDFEATCWMHWVKNRIMPTTHDATLSIQRVVLVYCIMKGILLDLGRILVDTLRQTAAKPKDAMFCPGLVTRLCHASGLLPAA
        GA+W    G   + KS  LD  A  W+ ++  R++PT H   ++  R +L+YCIM G   D+G+I+ D++ Q+A   +D ++ P L+T+LC  +G+    
Subjt:  GAKWD-DHGAARTLKSQLLDFEATCWMHWVKNRIMPTTHDATLSIQRVVLVYCIMKGILLDLGRILVDTLRQTAAKPKDAMFCPGLVTRLCHASGLLPAA

Query:  YEEI
         EE+
Subjt:  YEEI

A0A2P5BCG4 Uncharacterized protein (Fragment)4.6e-0937.86Show/hide
Query:  LNAVLLGVARPGAKWD--DHGAARTLKSQLLDFEATCWMHWVKNRIMPTTHDATLSIQRVVLVYCIMKGILLDLGRILVDTLRQTAAKPKDAMFCPGLVT
        L  VL  VA  GA+W+    GA   ++S L    A  W H++K+R++PTTH  T+S  R++L++ ++ G  +++GR++   +R  AA+   A+F P L+T
Subjt:  LNAVLLGVARPGAKWD--DHGAARTLKSQLLDFEATCWMHWVKNRIMPTTHDATLSIQRVVLVYCIMKGILLDLGRILVDTLRQTAAKPKDAMFCPGLVT

Query:  RLC
        RLC
Subjt:  RLC

A0A2P5DAQ2 Uncharacterized protein2.1e-0927.72Show/hide
Query:  PQSMTDQISSRRWETVCENPRTYVPALVHDFYRAQCYLDDDF---------------------------------------LNAVLLGVARPGAKWD--D
        P  + D I    W+  C +P   +  LV +FY      DDD                                        L  VL  VA  GA+W+   
Subjt:  PQSMTDQISSRRWETVCENPRTYVPALVHDFYRAQCYLDDDF---------------------------------------LNAVLLGVARPGAKWD--D

Query:  HGAARTLKSQLLDFEATCWMHWVKNRIMPTTHDATLSIQRVVLVYCIMKGILLDLGRILVDTLRQTAAKPKDAMFCPGLVTRLC
         GA   L+S  L+  A  W H++K+R++PTTH  T+S + V L+Y ++ G  +++GR++   +   AA+   A+F P L+T +C
Subjt:  HGAARTLKSQLLDFEATCWMHWVKNRIMPTTHDATLSIQRVVLVYCIMKGILLDLGRILVDTLRQTAAKPKDAMFCPGLVTRLC

A0A6A2WSK8 Uncharacterized protein4.2e-1029.75Show/hide
Query:  DDDFLNAVLLGVARPGAKWDDHGAAR-TLKSQLLDFEATCWMHWVKNRIMPTTHDATLSIQRVVLVYCIMKGILLDLGRILVDTLRQTAAKPKDAMFCPG
        D +  + VL  +     +W+    +R ++  + L   A  W H++K+++MPT+H+ T+S+  ++L++ IMK  L+D+GRI+V  +     K   A+  P 
Subjt:  DDDFLNAVLLGVARPGAKWDDHGAAR-TLKSQLLDFEATCWMHWVKNRIMPTTHDATLSIQRVVLVYCIMKGILLDLGRILVDTLRQTAAKPKDAMFCPG

Query:  LVTRLCHASGLLPAAYEEIRP
        L+T LC    +    ++EI P
Subjt:  LVTRLCHASGLLPAAYEEIRP

A0A6A2Y697 Reverse transcriptase domain-containing protein4.2e-1025.31Show/hide
Query:  LPQSMTDQISSRRWETVCENPRTYVPAL--VHDFYRAQCYLDDDFLNAVLLGVARPGAKWDDHGAAR-TLKSQLLDFEATCWMHWVKNRIMPTTHDATLS
        L   + D ++  +W+    +P +   +L  V    + +   D    + +L  +     +W+    +R ++  + L   A  W H++K+++MPT+H+ T+S
Subjt:  LPQSMTDQISSRRWETVCENPRTYVPAL--VHDFYRAQCYLDDDFLNAVLLGVARPGAKWDDHGAAR-TLKSQLLDFEATCWMHWVKNRIMPTTHDATLS

Query:  IQRVVLVYCIMKGILLDLGRILVDTLRQTAAKPKDAMFCPGLVTRLCHASGLLPAAYEEIRP
        + R++L++ IM    +D+GRI+V  +    +K   A+  P L+T LC    +   A++EI P
Subjt:  IQRVVLVYCIMKGILLDLGRILVDTLRQTAAKPKDAMFCPGLVTRLCHASGLLPAAYEEIRP

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCCGATTCGCAAAACCTCTTCATTACAGGCTACGCAGACGATGCACCTTTCTCATCGCCGGAGGTGGAAGGTCCTAACCAAGACGTCATTTCCTCCCCTAGTGAGGA
AAATGAGAACCAAACCAAGGGAGACCCCATGGAAACAAAGGAGCATGAATTCATCGACGTCGAGCAAACCACCACTGAACCGTCCACCACCACAGCCAACCCCACGGAGG
TGCTCGACATTGCATCGTTAGACACCTCCACCTTCACCATTCAACCCGTAACCCTTCAACCTACCCAAAACACCTTCGCCCCTCAGAACCTTACTCCATTTACCTCCCCT
GTCCCCTCTGTTCTTCTTCTTCCTCCCTCAGACTCCTCAGCTACCCTCGCATCAGATTCCATCCCTTCATCTTCCTCCACTCCCGCAAATAATTCCCTTCCACCATCAAC
CTCTGCGCAACCCACTTCACCGCAGTTTTCTGAGCGGGAAATGGCCGCATGGGACGCCTTGATGGGAGAATTAGGTGCAGAAGGCGACGCAGTTTGCCAAAAAGAAGAGC
AAGAAAAGGTTGCGACAGAAGAAACTGCGCGCAAGGCCGCCGCAGATGAAGAAGCGGCCAGAGAAAGAGAATGCACCAACAAGTCGGTGCAAGATGAAATCGCCGCATAC
GTCTCCGCGGCAAGCTTGGCCATAATTGCTGCAGCTCTGGACGCAGAATTGGACTCAGAGGATGACCTGCCCTTGACTCATCGCCGCAACCTCCAACCAACCGGGGTAAT
CATTCGAGAACCCTCAGAAGGGCCTGCGACGGCCCAAAGCAAGAAAAGAAAGGGGGCGCCCATCGCATCAAAAGAAAAAGGCAAAGAAAAAGTGAGCGCAGATAAAGTGG
GCGAGGACAAAGGAAAGTTCCAGGAGGAGAGGGAATTCAGCTGCACACTCCCACAATCCATGACAGATCAAATCTCCAGCCGCAGATGGGAGACAGTTTGCGAAAACCCT
CGCACCTACGTCCCTGCGTTAGTCCACGACTTCTACCGGGCGCAATGCTATTTGGACGACGATTTCCTGAACGCAGTACTTCTTGGGGTGGCCAGACCTGGAGCCAAATG
GGACGACCATGGAGCTGCGAGGACCCTGAAGTCGCAATTATTGGACTTCGAGGCCACATGCTGGATGCACTGGGTGAAGAATCGCATCATGCCTACAACGCATGATGCCA
CATTGAGCATCCAAAGGGTGGTTCTCGTCTACTGCATCATGAAGGGAATCCTCCTCGACTTGGGCCGAATCCTCGTCGACACCCTGCGACAGACTGCCGCAAAACCCAAG
GATGCGATGTTTTGCCCTGGCCTCGTCACAAGACTTTGCCACGCATCAGGCCTTCTGCCTGCAGCATACGAAGAAATCCGACCCATCACTGTCTGCGCCCAACCTCAGGG
ATCCTTGCCACCACCACCGCCACCACCACCACAATCGCAACCAACAGTCCAACAAACACCGCAGCACGATGAGGCCCTGCGACAAGATGATATGTATGCGGCCCCGTTGC
CCAGCCCTCCTCACAACAATGAAGAAGTCCTTGCACCCAGCTCCCAGCCGCAAACCATACCTTTTGCCAGCACAAGTGATGCTGCAGCTTATCCTCAACTTGATATAGAC
TCAGCCCTCATCTTTTCAGAGCTGCGGCAGATGATTCAAGAGGTTGCGGAGCCCCTGCGCCAACAACAGGAGAGATGGTGCCAGCAGCAAGAACTGCTGCGGAGGCAACA
AGAAGAACTGTCCACACGCGTGAACTCTTTAGTCCTCTTCTTGTTGCGATGGACTGAATCTTTTGGTCGCTTGCCAGTCACGCCCAATCTGTTCATGCGGCCACCTGCGC
AACAAAGACCCAATGGCGTAGGCCCATCACAAGTGCGCGGTTCCATGCCTCCGCCTGCGCCGAGGGATCCGAGACCACCACCTCCACCGCAGGAGTAG
mRNA sequenceShow/hide mRNA sequence
ATGTCCGATTCGCAAAACCTCTTCATTACAGGCTACGCAGACGATGCACCTTTCTCATCGCCGGAGGTGGAAGGTCCTAACCAAGACGTCATTTCCTCCCCTAGTGAGGA
AAATGAGAACCAAACCAAGGGAGACCCCATGGAAACAAAGGAGCATGAATTCATCGACGTCGAGCAAACCACCACTGAACCGTCCACCACCACAGCCAACCCCACGGAGG
TGCTCGACATTGCATCGTTAGACACCTCCACCTTCACCATTCAACCCGTAACCCTTCAACCTACCCAAAACACCTTCGCCCCTCAGAACCTTACTCCATTTACCTCCCCT
GTCCCCTCTGTTCTTCTTCTTCCTCCCTCAGACTCCTCAGCTACCCTCGCATCAGATTCCATCCCTTCATCTTCCTCCACTCCCGCAAATAATTCCCTTCCACCATCAAC
CTCTGCGCAACCCACTTCACCGCAGTTTTCTGAGCGGGAAATGGCCGCATGGGACGCCTTGATGGGAGAATTAGGTGCAGAAGGCGACGCAGTTTGCCAAAAAGAAGAGC
AAGAAAAGGTTGCGACAGAAGAAACTGCGCGCAAGGCCGCCGCAGATGAAGAAGCGGCCAGAGAAAGAGAATGCACCAACAAGTCGGTGCAAGATGAAATCGCCGCATAC
GTCTCCGCGGCAAGCTTGGCCATAATTGCTGCAGCTCTGGACGCAGAATTGGACTCAGAGGATGACCTGCCCTTGACTCATCGCCGCAACCTCCAACCAACCGGGGTAAT
CATTCGAGAACCCTCAGAAGGGCCTGCGACGGCCCAAAGCAAGAAAAGAAAGGGGGCGCCCATCGCATCAAAAGAAAAAGGCAAAGAAAAAGTGAGCGCAGATAAAGTGG
GCGAGGACAAAGGAAAGTTCCAGGAGGAGAGGGAATTCAGCTGCACACTCCCACAATCCATGACAGATCAAATCTCCAGCCGCAGATGGGAGACAGTTTGCGAAAACCCT
CGCACCTACGTCCCTGCGTTAGTCCACGACTTCTACCGGGCGCAATGCTATTTGGACGACGATTTCCTGAACGCAGTACTTCTTGGGGTGGCCAGACCTGGAGCCAAATG
GGACGACCATGGAGCTGCGAGGACCCTGAAGTCGCAATTATTGGACTTCGAGGCCACATGCTGGATGCACTGGGTGAAGAATCGCATCATGCCTACAACGCATGATGCCA
CATTGAGCATCCAAAGGGTGGTTCTCGTCTACTGCATCATGAAGGGAATCCTCCTCGACTTGGGCCGAATCCTCGTCGACACCCTGCGACAGACTGCCGCAAAACCCAAG
GATGCGATGTTTTGCCCTGGCCTCGTCACAAGACTTTGCCACGCATCAGGCCTTCTGCCTGCAGCATACGAAGAAATCCGACCCATCACTGTCTGCGCCCAACCTCAGGG
ATCCTTGCCACCACCACCGCCACCACCACCACAATCGCAACCAACAGTCCAACAAACACCGCAGCACGATGAGGCCCTGCGACAAGATGATATGTATGCGGCCCCGTTGC
CCAGCCCTCCTCACAACAATGAAGAAGTCCTTGCACCCAGCTCCCAGCCGCAAACCATACCTTTTGCCAGCACAAGTGATGCTGCAGCTTATCCTCAACTTGATATAGAC
TCAGCCCTCATCTTTTCAGAGCTGCGGCAGATGATTCAAGAGGTTGCGGAGCCCCTGCGCCAACAACAGGAGAGATGGTGCCAGCAGCAAGAACTGCTGCGGAGGCAACA
AGAAGAACTGTCCACACGCGTGAACTCTTTAGTCCTCTTCTTGTTGCGATGGACTGAATCTTTTGGTCGCTTGCCAGTCACGCCCAATCTGTTCATGCGGCCACCTGCGC
AACAAAGACCCAATGGCGTAGGCCCATCACAAGTGCGCGGTTCCATGCCTCCGCCTGCGCCGAGGGATCCGAGACCACCACCTCCACCGCAGGAGTAG
Protein sequenceShow/hide protein sequence
MSDSQNLFITGYADDAPFSSPEVEGPNQDVISSPSEENENQTKGDPMETKEHEFIDVEQTTTEPSTTTANPTEVLDIASLDTSTFTIQPVTLQPTQNTFAPQNLTPFTSP
VPSVLLLPPSDSSATLASDSIPSSSSTPANNSLPPSTSAQPTSPQFSEREMAAWDALMGELGAEGDAVCQKEEQEKVATEETARKAAADEEAARERECTNKSVQDEIAAY
VSAASLAIIAAALDAELDSEDDLPLTHRRNLQPTGVIIREPSEGPATAQSKKRKGAPIASKEKGKEKVSADKVGEDKGKFQEEREFSCTLPQSMTDQISSRRWETVCENP
RTYVPALVHDFYRAQCYLDDDFLNAVLLGVARPGAKWDDHGAARTLKSQLLDFEATCWMHWVKNRIMPTTHDATLSIQRVVLVYCIMKGILLDLGRILVDTLRQTAAKPK
DAMFCPGLVTRLCHASGLLPAAYEEIRPITVCAQPQGSLPPPPPPPPQSQPTVQQTPQHDEALRQDDMYAAPLPSPPHNNEEVLAPSSQPQTIPFASTSDAAAYPQLDID
SALIFSELRQMIQEVAEPLRQQQERWCQQQELLRRQQEELSTRVNSLVLFLLRWTESFGRLPVTPNLFMRPPAQQRPNGVGPSQVRGSMPPPAPRDPRPPPPPQE