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Spg027938 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg027938
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionFanconi-associated nuclease
Genome locationscaffold2:37380702..37382935
RNA-Seq ExpressionSpg027938
SyntenySpg027938
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
EXB53755.1 hypothetical protein L484_022412 [Morus notabilis]1.9e-0930.48Show/hide
Query:  KNLCKKPEPSVVNLVREFYANFQDNGLWMTKVRGQIVQWSPTVINE-YEFYDVTDFPYAIFNAMEIAPSNDQLQAALTACGVEGACWKMSKHG-------
        +  C+ P   +V LVREFYAN  D       V+   V ++   IN  +   +V D  Y  F A E+  +++QL+  L    +EGA W++S  G       
Subjt:  KNLCKKPEPSVVNLVREFYANFQDNGLWMTKVRGQIVQWSPTVINE-YEFYDVTDFPYAIFNAMEIAPSNDQLQAALTACGVEGACWKMSKHG-------

Query:  ----------------------------NRSLLATYVTP--EANLGQLISREIAAC-ARKKSGKLFFPNLITALCLKANVKITEEDEIVMDKGIIDTTTI
                                    +R LL   +      N+ ++  +EI AC A +K G L+FP+LIT L LKANV   +++ IV + G I T +I
Subjt:  ----------------------------NRSLLATYVTP--EANLGQLISREIAAC-ARKKSGKLFFPNLITALCLKANVKITEEDEIVMDKGIIDTTTI

Query:  TRLMGDSKGR
        +R+   S+GR
Subjt:  TRLMGDSKGR

KAF4378427.1 hypothetical protein F8388_021621 [Cannabis sativa]9.2e-0930.41Show/hide
Query:  FFLSQGLARRDVALCSCTNFNLQ--KKLQIKNLCKKPEPSVVNLVREFYANFQDNGLWMTK--VRGQIVQWSPTVINE-YEFYDVTDFPYAIFNAMEIAP
        F++ +G+   D    S   + ++  KK + + LC+ P  +V  +V+EFYANF  +  W     VR   V +S  +INE ++  ++T      F+      
Subjt:  FFLSQGLARRDVALCSCTNFNLQ--KKLQIKNLCKKPEPSVVNLVREFYANFQDNGLWMTK--VRGQIVQWSPTVINE-YEFYDVTDFPYAIFNAMEIAP

Query:  SNDQLQAALTACGVEGACWKMSKHG----NRSLLATYV--TPEANLGQLISREIAACARKKSGKLFFPNLITALCLKANVKITEEDEIVMDKGI
        ++  +   +      GA W + +HG     RS L   +    E N+G+++++ I  CA +  GKLFFP LIT LC  A V +  ED  V  KG+
Subjt:  SNDQLQAALTACGVEGACWKMSKHG----NRSLLATYV--TPEANLGQLISREIAACARKKSGKLFFPNLITALCLKANVKITEEDEIVMDKGI

PIN01433.1 hypothetical protein CDL12_26059 [Handroanthus impetiginosus]3.9e-0727.8Show/hide
Query:  KNLCKKPEPSVVNLVREFYANFQDNGLWMTKVRGQIVQWSPTVINEYEFYDVTDFPYAIFNAMEIAPSN--DQLQAALTACGVEGACWKMSK--------
        K     PE  V+ LVREFYAN  ++      VRG+ V +    INE     + + P    +A E    N  D  +   T C   GA WKM+K        
Subjt:  KNLCKKPEPSVVNLVREFYANFQDNGLWMTKVRGQIVQWSPTVINEYEFYDVTDFPYAIFNAMEIAPSN--DQLQAALTACGVEGACWKMSK--------

Query:  ----------------------HGNR------SLLATYVTPEA-NLGQLISREIAACARKKSGKLFFPNLITALCLKANVKITEEDEIVMDKGIIDTTTI
                              H          LL   +T +A ++G++IS  I   A      L+FP+LIT LC +A VK  E++E++  +  ID TT+
Subjt:  ----------------------HGNR------SLLATYVTPEA-NLGQLISREIAACARKKSGKLFFPNLITALCLKANVKITEEDEIVMDKGIIDTTTI

Query:  TRLMGDSKGRKSSTVASGPIALP
         R++         +    P  +P
Subjt:  TRLMGDSKGRKSSTVASGPIALP

PON35554.1 hypothetical protein PanWU01x14_335450, partial [Parasponia andersonii]5.8e-1129.7Show/hide
Query:  KNLCKKPEPSVVNLVREFYANFQDNGLWMTKVRGQIVQWSPTVINE-YEFYDVTDFPYAIFNAMEIAPSNDQLQAALTACGVEGACWKMSKHGNRSLLAT
        K  C  PE  +V LVREFYAN  D       VRG  V WS   IN  +   D  D        +    +   L   L    V GA W +S  G  + + +
Subjt:  KNLCKKPEPSVVNLVREFYANFQDNGLWMTKVRGQIVQWSPTVINE-YEFYDVTDFPYAIFNAMEIAPSNDQLQAALTACGVEGACWKMSKHGNRSLLAT

Query:  YVTPEA-------------------------------------NLGQLISREIAACARKKSGKLFFPNLITALCLKANVKITEEDEIVMDKGIIDTTTIT
         +TP A                                     N+G++I  EI ACA +K+G LFFP+LIT LC  A       +E + + G ID   + 
Subjt:  YVTPEA-------------------------------------NLGQLISREIAACARKKSGKLFFPNLITALCLKANVKITEEDEIVMDKGIIDTTTIT

Query:  RL
        R+
Subjt:  RL

PON46472.1 hypothetical protein PanWU01x14_251180, partial [Parasponia andersonii]9.8e-1129.21Show/hide
Query:  KNLCKKPEPSVVNLVREFYANFQDNGLWMTKVRGQIVQWSPTVINE-YEFYDVTDFPYAIFNAMEIAPSNDQLQAALTACGVEGACWKMSKHGNRSLLAT
        K  C  PE  +V LVREFYAN  D       VRG  V WS   IN  +   D  D        +    +   L   L      GA W +S  G  + + +
Subjt:  KNLCKKPEPSVVNLVREFYANFQDNGLWMTKVRGQIVQWSPTVINE-YEFYDVTDFPYAIFNAMEIAPSNDQLQAALTACGVEGACWKMSKHGNRSLLAT

Query:  YVTPEA-------------------------------------NLGQLISREIAACARKKSGKLFFPNLITALCLKANVKITEEDEIVMDKGIIDTTTIT
         +TP A                                     N+G++I  EI ACA +K+G LFFP+LIT LC  A       +E + + G ID   + 
Subjt:  YVTPEA-------------------------------------NLGQLISREIAACARKKSGKLFFPNLITALCLKANVKITEEDEIVMDKGIIDTTTIT

Query:  RL
        R+
Subjt:  RL

TrEMBL top hitse value%identityAlignment
A0A2G9G807 Uncharacterized protein1.9e-0727.8Show/hide
Query:  KNLCKKPEPSVVNLVREFYANFQDNGLWMTKVRGQIVQWSPTVINEYEFYDVTDFPYAIFNAMEIAPSN--DQLQAALTACGVEGACWKMSK--------
        K     PE  V+ LVREFYAN  ++      VRG+ V +    INE     + + P    +A E    N  D  +   T C   GA WKM+K        
Subjt:  KNLCKKPEPSVVNLVREFYANFQDNGLWMTKVRGQIVQWSPTVINEYEFYDVTDFPYAIFNAMEIAPSN--DQLQAALTACGVEGACWKMSK--------

Query:  ----------------------HGNR------SLLATYVTPEA-NLGQLISREIAACARKKSGKLFFPNLITALCLKANVKITEEDEIVMDKGIIDTTTI
                              H          LL   +T +A ++G++IS  I   A      L+FP+LIT LC +A VK  E++E++  +  ID TT+
Subjt:  ----------------------HGNR------SLLATYVTPEA-NLGQLISREIAACARKKSGKLFFPNLITALCLKANVKITEEDEIVMDKGIIDTTTI

Query:  TRLMGDSKGRKSSTVASGPIALP
         R++         +    P  +P
Subjt:  TRLMGDSKGRKSSTVASGPIALP

A0A2P5AGA5 Uncharacterized protein (Fragment)2.8e-1129.7Show/hide
Query:  KNLCKKPEPSVVNLVREFYANFQDNGLWMTKVRGQIVQWSPTVINE-YEFYDVTDFPYAIFNAMEIAPSNDQLQAALTACGVEGACWKMSKHGNRSLLAT
        K  C  PE  +V LVREFYAN  D       VRG  V WS   IN  +   D  D        +    +   L   L    V GA W +S  G  + + +
Subjt:  KNLCKKPEPSVVNLVREFYANFQDNGLWMTKVRGQIVQWSPTVINE-YEFYDVTDFPYAIFNAMEIAPSNDQLQAALTACGVEGACWKMSKHGNRSLLAT

Query:  YVTPEA-------------------------------------NLGQLISREIAACARKKSGKLFFPNLITALCLKANVKITEEDEIVMDKGIIDTTTIT
         +TP A                                     N+G++I  EI ACA +K+G LFFP+LIT LC  A       +E + + G ID   + 
Subjt:  YVTPEA-------------------------------------NLGQLISREIAACARKKSGKLFFPNLITALCLKANVKITEEDEIVMDKGIIDTTTIT

Query:  RL
        R+
Subjt:  RL

A0A2P5BCG4 Uncharacterized protein (Fragment)4.8e-1129.21Show/hide
Query:  KNLCKKPEPSVVNLVREFYANFQDNGLWMTKVRGQIVQWSPTVINE-YEFYDVTDFPYAIFNAMEIAPSNDQLQAALTACGVEGACWKMSKHGNRSLLAT
        K  C  PE  +V LVREFYAN  D       VRG  V WS   IN  +   D  D        +    +   L   L      GA W +S  G  + + +
Subjt:  KNLCKKPEPSVVNLVREFYANFQDNGLWMTKVRGQIVQWSPTVINE-YEFYDVTDFPYAIFNAMEIAPSNDQLQAALTACGVEGACWKMSKHGNRSLLAT

Query:  YVTPEA-------------------------------------NLGQLISREIAACARKKSGKLFFPNLITALCLKANVKITEEDEIVMDKGIIDTTTIT
         +TP A                                     N+G++I  EI ACA +K+G LFFP+LIT LC  A       +E + + G ID   + 
Subjt:  YVTPEA-------------------------------------NLGQLISREIAACARKKSGKLFFPNLITALCLKANVKITEEDEIVMDKGIIDTTTIT

Query:  RL
        R+
Subjt:  RL

A0A7J6G6G2 Fanconi-associated nuclease4.5e-0930.41Show/hide
Query:  FFLSQGLARRDVALCSCTNFNLQ--KKLQIKNLCKKPEPSVVNLVREFYANFQDNGLWMTK--VRGQIVQWSPTVINE-YEFYDVTDFPYAIFNAMEIAP
        F++ +G+   D    S   + ++  KK + + LC+ P  +V  +V+EFYANF  +  W     VR   V +S  +INE ++  ++T      F+      
Subjt:  FFLSQGLARRDVALCSCTNFNLQ--KKLQIKNLCKKPEPSVVNLVREFYANFQDNGLWMTK--VRGQIVQWSPTVINE-YEFYDVTDFPYAIFNAMEIAP

Query:  SNDQLQAALTACGVEGACWKMSKHG----NRSLLATYV--TPEANLGQLISREIAACARKKSGKLFFPNLITALCLKANVKITEEDEIVMDKGI
        ++  +   +      GA W + +HG     RS L   +    E N+G+++++ I  CA +  GKLFFP LIT LC  A V +  ED  V  KG+
Subjt:  SNDQLQAALTACGVEGACWKMSKHG----NRSLLATYV--TPEANLGQLISREIAACARKKSGKLFFPNLITALCLKANVKITEEDEIVMDKGI

W9QTD9 Uncharacterized protein9.0e-1030.48Show/hide
Query:  KNLCKKPEPSVVNLVREFYANFQDNGLWMTKVRGQIVQWSPTVINE-YEFYDVTDFPYAIFNAMEIAPSNDQLQAALTACGVEGACWKMSKHG-------
        +  C+ P   +V LVREFYAN  D       V+   V ++   IN  +   +V D  Y  F A E+  +++QL+  L    +EGA W++S  G       
Subjt:  KNLCKKPEPSVVNLVREFYANFQDNGLWMTKVRGQIVQWSPTVINE-YEFYDVTDFPYAIFNAMEIAPSNDQLQAALTACGVEGACWKMSKHG-------

Query:  ----------------------------NRSLLATYVTP--EANLGQLISREIAAC-ARKKSGKLFFPNLITALCLKANVKITEEDEIVMDKGIIDTTTI
                                    +R LL   +      N+ ++  +EI AC A +K G L+FP+LIT L LKANV   +++ IV + G I T +I
Subjt:  ----------------------------NRSLLATYVTP--EANLGQLISREIAAC-ARKKSGKLFFPNLITALCLKANVKITEEDEIVMDKGIIDTTTI

Query:  TRLMGDSKGR
        +R+   S+GR
Subjt:  TRLMGDSKGR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCAAGTAGCTTCTTCAAGATGTTCCCGTGAGCTCAACTTCTATTGCTCTTTCTTTCTATCTCAAGGTCTAGCTCGAAGAGATGTTGCTCTTTGCTCATGCACCAACTT
CAACTTGCAAAAGAAACTGCAAATCAAAAACCTTTGCAAGAAGCCAGAGCCATCGGTTGTTAATTTGGTAAGGGAATTTTATGCCAATTTTCAAGACAATGGGCTGTGGA
TGACAAAGGTTCGGGGTCAAATTGTTCAATGGAGTCCCACGGTAATCAATGAGTATGAGTTCTACGATGTCACTGACTTTCCATATGCTATTTTTAACGCCATGGAAATA
GCCCCGTCTAATGATCAACTTCAAGCGGCATTAACGGCTTGTGGAGTAGAAGGTGCATGTTGGAAGATGTCCAAGCATGGAAATCGATCATTGTTAGCAACTTATGTAAC
GCCTGAAGCTAATCTGGGGCAGCTTATCTCTAGAGAAATTGCAGCGTGCGCAAGGAAGAAATCAGGGAAGTTATTCTTTCCTAATTTGATTACAGCTCTATGTCTCAAAG
CCAACGTGAAGATAACAGAGGAGGATGAGATCGTAATGGACAAGGGAATCATTGATACGACAACCATTACTCGGCTCATGGGAGATAGCAAGGGCAGGAAGAGCTCAACA
GTTGCTAGTGGCCCCATTGCTTTACCGAGAGTTTACTCTCATCCAAGACACAACTCCTTTCCTCCGGAGTATACTGCCTGCCCAGAGCTCAACAACGGATTTCCCCATGA
CTACTTAGGCTCACAACTTCTTTGTTCGCCGATGTGGAACTTTGGTCGCACTCCCAACAATCCTAGTGAAGAGTGGGAGTGA
mRNA sequenceShow/hide mRNA sequence
ATGCAAGTAGCTTCTTCAAGATGTTCCCGTGAGCTCAACTTCTATTGCTCTTTCTTTCTATCTCAAGGTCTAGCTCGAAGAGATGTTGCTCTTTGCTCATGCACCAACTT
CAACTTGCAAAAGAAACTGCAAATCAAAAACCTTTGCAAGAAGCCAGAGCCATCGGTTGTTAATTTGGTAAGGGAATTTTATGCCAATTTTCAAGACAATGGGCTGTGGA
TGACAAAGGTTCGGGGTCAAATTGTTCAATGGAGTCCCACGGTAATCAATGAGTATGAGTTCTACGATGTCACTGACTTTCCATATGCTATTTTTAACGCCATGGAAATA
GCCCCGTCTAATGATCAACTTCAAGCGGCATTAACGGCTTGTGGAGTAGAAGGTGCATGTTGGAAGATGTCCAAGCATGGAAATCGATCATTGTTAGCAACTTATGTAAC
GCCTGAAGCTAATCTGGGGCAGCTTATCTCTAGAGAAATTGCAGCGTGCGCAAGGAAGAAATCAGGGAAGTTATTCTTTCCTAATTTGATTACAGCTCTATGTCTCAAAG
CCAACGTGAAGATAACAGAGGAGGATGAGATCGTAATGGACAAGGGAATCATTGATACGACAACCATTACTCGGCTCATGGGAGATAGCAAGGGCAGGAAGAGCTCAACA
GTTGCTAGTGGCCCCATTGCTTTACCGAGAGTTTACTCTCATCCAAGACACAACTCCTTTCCTCCGGAGTATACTGCCTGCCCAGAGCTCAACAACGGATTTCCCCATGA
CTACTTAGGCTCACAACTTCTTTGTTCGCCGATGTGGAACTTTGGTCGCACTCCCAACAATCCTAGTGAAGAGTGGGAGTGA
Protein sequenceShow/hide protein sequence
MQVASSRCSRELNFYCSFFLSQGLARRDVALCSCTNFNLQKKLQIKNLCKKPEPSVVNLVREFYANFQDNGLWMTKVRGQIVQWSPTVINEYEFYDVTDFPYAIFNAMEI
APSNDQLQAALTACGVEGACWKMSKHGNRSLLATYVTPEANLGQLISREIAACARKKSGKLFFPNLITALCLKANVKITEEDEIVMDKGIIDTTTITRLMGDSKGRKSST
VASGPIALPRVYSHPRHNSFPPEYTACPELNNGFPHDYLGSQLLCSPMWNFGRTPNNPSEEWE