; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg027961 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg027961
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionReverse transcriptase domain-containing protein
Genome locationscaffold2:43380188..43381957
RNA-Seq ExpressionSpg027961
SyntenySpg027961
Gene Ontology termsNA
InterPro domainsIPR026960 - Reverse transcriptase zinc-binding domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
CAN75040.1 hypothetical protein VITISV_026478 [Vitis vinifera]9.5e-3034.96Show/hide
Query:  EIVGKPIHLGGLEIGNLRTHNKALLAKWLWHFTLEASSLWYKIIVSKYGPHPSEWLLGGDRGVGGTFRNLWKDIVMALPSFFGLVHHVVGDGNDTYFWED
        E+V +P  LGGL  G +   N ALL KWLW F  E S LWYK+I S YG HP+ W    +  V  + R  WK I      F   V  VVG+G    FWED
Subjt:  EIVGKPIHLGGLEIGNLRTHNKALLAKWLWHFTLEASSLWYKIIVSKYGPHPSEWLLGGDRGVGGTFRNLWKDIVMALPSFFGLVHHVVGDGNDTYFWED

Query:  KWVGDRLLYLTFPHLFQLSS--------------MKNHSVADVKLPKKVEFFVWQVLHGRVNTFDRL-LRRNAPLFGPFCCILCRKAEKDLDHFLWSCDF
         W   R   L+   LF + S              +    +   K+P KV+   W V HG+VNT D+L LRR      P  CILC+   + +DH    C  
Subjt:  KWVGDRLLYLTFPHLFQLSS--------------MKNHSVADVKLPKKVEFFVWQVLHGRVNTFDRL-LRRNAPLFGPFCCILCRKAEKDLDHFLWSCDF

Query:  ARSSWDLFFDAFGQQRI---SYMDLRVLIEEFLLNPTLHGKGRFLW
            W+  F   G   +   S+ D+ V+  + L N     +G+ LW
Subjt:  ARSSWDLFFDAFGQQRI---SYMDLRVLIEEFLLNPTLHGKGRFLW

RVW53981.1 LINE-1 retrotransposable element ORF2 protein [Vitis vinifera]4.7e-2935.04Show/hide
Query:  EIVGKPIHLGGLEIGNLRTHNKALLAKWLWHFTLEASSLWYKIIVSKYGPHPSEWLLGGDRGVGGTFRNLWKDIVMALPSFFGLVHHVVGDGNDTYFWED
        E+V +P  +GGL  G     N ALL KWLW F  E S LW+K+I S YG HP+ W    +  V  + R  WK I      F   V  VVG+G    FWED
Subjt:  EIVGKPIHLGGLEIGNLRTHNKALLAKWLWHFTLEASSLWYKIIVSKYGPHPSEWLLGGDRGVGGTFRNLWKDIVMALPSFFGLVHHVVGDGNDTYFWED

Query:  KW-VGDRLLYLTFPHLFQLSSMKNHSVA-DVKLPKKVEFFVWQVLHGRVNTFDRL-LRRNAPLFGPFCCILCRKAEKDLDHFLWSCDFARSSWDLFFDAF
         W V   + +L     F+  ++ +  V    K+  KV+   W V HG+VNT D+L LRR      P  CILC+   + +DH  + C      W   F+  
Subjt:  KW-VGDRLLYLTFPHLFQLSSMKNHSVA-DVKLPKKVEFFVWQVLHGRVNTFDRL-LRRNAPLFGPFCCILCRKAEKDLDHFLWSCDFARSSWDLFFDAF

Query:  GQQRI---SYMDLRVLIEEFLLNPTLHGKGRFLW
        G   +   S  D+ V+  + L N     +G+ LW
Subjt:  GQQRI---SYMDLRVLIEEFLLNPTLHGKGRFLW

RVW69333.1 putative ribonuclease H protein [Vitis vinifera]3.3e-3037.81Show/hide
Query:  EIVGKPIHLGGLEIGNLRTHNKALLAKWLWHFTLEASSLWYKIIVSKYGPHPSEWLLGGDRGVGGTFRNLWKDIVMALPSFFGLVHHVVGDGNDTYFWED
        E+V +P  +GGL  G     N ALL KWLW F  E S LW+K+I S YG HP+ W    +  V  + R  WK I      F   VH VVG+G    FWED
Subjt:  EIVGKPIHLGGLEIGNLRTHNKALLAKWLWHFTLEASSLWYKIIVSKYGPHPSEWLLGGDRGVGGTFRNLWKDIVMALPSFFGLVHHVVGDGNDTYFWED

Query:  KW-VGDRLLYLTFPHLFQLSSMKNHSV-ADVKLPKKVEFFVWQVLHGRVNTFDRL-LRRNAPLFGPFCCILCRKAEKDLDHFLWSCDFARSSWDLFFDAF
         W V   + +L     F+  ++ +  V  ++K P KV+   W V HG+VNT D+L LRR      P  CILC+   + +DH    C      W   F+  
Subjt:  KW-VGDRLLYLTFPHLFQLSSMKNHSV-ADVKLPKKVEFFVWQVLHGRVNTFDRL-LRRNAPLFGPFCCILCRKAEKDLDHFLWSCDFARSSWDLFFDAF

Query:  G
        G
Subjt:  G

RVX09324.1 LINE-1 retrotransposable element ORF2 protein [Vitis vinifera]4.0e-2832.1Show/hide
Query:  EIVGKPIHLGGLEIGNLRTHNKALLAKWLWHFTLEASSLWYKIIVSKYGPHPSEWLLGGDRGVGGTFRNLWKDIVMALPSFFGLVHHVVGDGNDTYFWED
        E+V +P   GGL  G +   N ALL KWLW F  E S LW+K+I S YG  P+ W    +  V  + R  WK I      F   V  VVG+G    FWED
Subjt:  EIVGKPIHLGGLEIGNLRTHNKALLAKWLWHFTLEASSLWYKIIVSKYGPHPSEWLLGGDRGVGGTFRNLWKDIVMALPSFFGLVHHVVGDGNDTYFWED

Query:  KWVGDRLLYLTFPHLFQLSSMKNHSVADV---------------------------------------KLPKKVEFFVWQVLHGRVNTFDRL-LRRNAPL
         W G++ L   F  L+++ S+KN +V++V                                       K+P KV+   W V HG+VNT D+L LRR    
Subjt:  KWVGDRLLYLTFPHLFQLSSMKNHSVADV---------------------------------------KLPKKVEFFVWQVLHGRVNTFDRL-LRRNAPL

Query:  FGPFCCILCRKAEKDLDHFLWSCDFARSSWDLFFDAFGQQRI---SYMDLRVLIEEFLLNPTLHGKGRFLW
          P  CILC+   + +DH    C      W+  F   G   +   S+ D+ V+  + L N     +G+ LW
Subjt:  FGPFCCILCRKAEKDLDHFLWSCDFARSSWDLFFDAFGQQRI---SYMDLRVLIEEFLLNPTLHGKGRFLW

TYK06215.1 peroxin Pex14 isoform X3 [Cucumis melo var. makuwa]9.2e-3341.31Show/hide
Query:  GLEIGNLRTHNKALLAKWLWHFTLEASSLWYKIIVSKYGPHPSEWLLGGDRGVGGTFRNLWKDIVMALPSFFGLVHHVVGDGNDTYFWEDKWVGDRLLYL
        G EI  ++  NKALLAKWLWHF+LE  SL ++IIVSK+G  P EW     +GV  TFRN  KDI   L +F  +V            W            
Subjt:  GLEIGNLRTHNKALLAKWLWHFTLEASSLWYKIIVSKYGPHPSEWLLGGDRGVGGTFRNLWKDIVMALPSFFGLVHHVVGDGNDTYFWEDKWVGDRLLYL

Query:  TFPHLFQLSSMKNHSVADVKLPKKVEFFVWQVLHGRVNTFDRLLRRNAPLFGPFCCILCRKAEKDLDHFLWSCDFARSSWDLFFDAFGQQRISYMDLRVL
                            +PKKV FF+WQ L G+VNT DRL+RR + L GPFCC L +KAE+DLDH  W C +AR+ W  F             +RV 
Subjt:  TFPHLFQLSSMKNHSVADVKLPKKVEFFVWQVLHGRVNTFDRLLRRNAPLFGPFCCILCRKAEKDLDHFLWSCDFARSSWDLFFDAFGQQRISYMDLRVL

Query:  IEEFLLNPTLHGK
        IEEFLL      K
Subjt:  IEEFLLNPTLHGK

TrEMBL top hitse value%identityAlignment
A0A2N9E191 Uncharacterized protein3.8e-3238.05Show/hide
Query:  EIVGKPIHLGGLEIGNLRTHNKALLAKWLWHFTLEASSLWYKIIVSKYGPHPSEWLLGGDRGVGGTFRNLWKDIVMALPSFFGLVHHVVGDGNDTYFWED
        +++  P   GGL I NLR  N ALL KWLW + LE  +LW K+I  KYG     W+    RG  G    LWK I     +FF  V   V DG+ T  W+D
Subjt:  EIVGKPIHLGGLEIGNLRTHNKALLAKWLWHFTLEASSLWYKIIVSKYGPHPSEWLLGGDRGVGGTFRNLWKDIVMALPSFFGLVHHVVGDGNDTYFWED

Query:  KWVGDRLLYLTFPHLFQLSSMKNHSVAD------------VKLPKKVEFFVWQVLHGRVNTFDRLLRRNAPLFGPFCCILCRKAEKDLDHFLWSCDFARS
         W  D  L   FP L++L+ +K+ +VAD            VK+P +V FF W    G++ T D L RR   L   +CC LC+   + +DH L  C +A+ 
Subjt:  KWVGDRLLYLTFPHLFQLSSMKNHSVAD------------VKLPKKVEFFVWQVLHGRVNTFDRLLRRNAPLFGPFCCILCRKAEKDLDHFLWSCDFARS

Query:  SWDLFFDAFGQQRISYMDLRVLIEEF
         WD+ F  FG   IS++  R ++E F
Subjt:  SWDLFFDAFGQQRISYMDLRVLIEEF

A0A2N9FHL6 Reverse transcriptase domain-containing protein6.0e-3033.61Show/hide
Query:  VGKPIHLGGLEIGNLRTHNKALLAKWLWHFTLEASSLWYKIIVSKYGPHPSEWLLGGDRGVGGTFRNLWKDIVMALPSFFGLVHHVVGDGNDTYFWEDKW
        V  PI  GGL + +L + N+ALL KWLW F LE S LW +++V++YG     W+    RG  G    LWK I     +F    H  VG G+   FW D+W
Subjt:  VGKPIHLGGLEIGNLRTHNKALLAKWLWHFTLEASSLWYKIIVSKYGPHPSEWLLGGDRGVGGTFRNLWKDIVMALPSFFGLVHHVVGDGNDTYFWEDKW

Query:  VGDRLLYLTFPHLFQLSSMKNHSVAD------------------------------------------------VKLPKKVEFFVWQVLHGRVNTFDRLL
          DR L   FP L++LS  +N +VA+                                                VK P +V FF+W    GR+ T + L 
Subjt:  VGDRLLYLTFPHLFQLSSMKNHSVAD------------------------------------------------VKLPKKVEFFVWQVLHGRVNTFDRLL

Query:  RRNAPLFGPFCCILCRKAEKDLDHFLWSCDFARSSWDLFFDAFG
        ++   L G +CC +C+KAE+ +DH L  C FAR  W L F   G
Subjt:  RRNAPLFGPFCCILCRKAEKDLDHFLWSCDFARSSWDLFFDAFG

A0A438GAU5 Putative ribonuclease H protein1.6e-3037.81Show/hide
Query:  EIVGKPIHLGGLEIGNLRTHNKALLAKWLWHFTLEASSLWYKIIVSKYGPHPSEWLLGGDRGVGGTFRNLWKDIVMALPSFFGLVHHVVGDGNDTYFWED
        E+V +P  +GGL  G     N ALL KWLW F  E S LW+K+I S YG HP+ W    +  V  + R  WK I      F   VH VVG+G    FWED
Subjt:  EIVGKPIHLGGLEIGNLRTHNKALLAKWLWHFTLEASSLWYKIIVSKYGPHPSEWLLGGDRGVGGTFRNLWKDIVMALPSFFGLVHHVVGDGNDTYFWED

Query:  KW-VGDRLLYLTFPHLFQLSSMKNHSV-ADVKLPKKVEFFVWQVLHGRVNTFDRL-LRRNAPLFGPFCCILCRKAEKDLDHFLWSCDFARSSWDLFFDAF
         W V   + +L     F+  ++ +  V  ++K P KV+   W V HG+VNT D+L LRR      P  CILC+   + +DH    C      W   F+  
Subjt:  KW-VGDRLLYLTFPHLFQLSSMKNHSV-ADVKLPKKVEFFVWQVLHGRVNTFDRL-LRRNAPLFGPFCCILCRKAEKDLDHFLWSCDFARSSWDLFFDAF

Query:  G
        G
Subjt:  G

A0A5D3C4A7 Peroxin Pex14 isoform X34.4e-3341.31Show/hide
Query:  GLEIGNLRTHNKALLAKWLWHFTLEASSLWYKIIVSKYGPHPSEWLLGGDRGVGGTFRNLWKDIVMALPSFFGLVHHVVGDGNDTYFWEDKWVGDRLLYL
        G EI  ++  NKALLAKWLWHF+LE  SL ++IIVSK+G  P EW     +GV  TFRN  KDI   L +F  +V            W            
Subjt:  GLEIGNLRTHNKALLAKWLWHFTLEASSLWYKIIVSKYGPHPSEWLLGGDRGVGGTFRNLWKDIVMALPSFFGLVHHVVGDGNDTYFWEDKWVGDRLLYL

Query:  TFPHLFQLSSMKNHSVADVKLPKKVEFFVWQVLHGRVNTFDRLLRRNAPLFGPFCCILCRKAEKDLDHFLWSCDFARSSWDLFFDAFGQQRISYMDLRVL
                            +PKKV FF+WQ L G+VNT DRL+RR + L GPFCC L +KAE+DLDH  W C +AR+ W  F             +RV 
Subjt:  TFPHLFQLSSMKNHSVADVKLPKKVEFFVWQVLHGRVNTFDRLLRRNAPLFGPFCCILCRKAEKDLDHFLWSCDFARSSWDLFFDAFGQQRISYMDLRVL

Query:  IEEFLLNPTLHGK
        IEEFLL      K
Subjt:  IEEFLLNPTLHGK

A5BV95 Reverse transcriptase domain-containing protein4.6e-3034.96Show/hide
Query:  EIVGKPIHLGGLEIGNLRTHNKALLAKWLWHFTLEASSLWYKIIVSKYGPHPSEWLLGGDRGVGGTFRNLWKDIVMALPSFFGLVHHVVGDGNDTYFWED
        E+V +P  LGGL  G +   N ALL KWLW F  E S LWYK+I S YG HP+ W    +  V  + R  WK I      F   V  VVG+G    FWED
Subjt:  EIVGKPIHLGGLEIGNLRTHNKALLAKWLWHFTLEASSLWYKIIVSKYGPHPSEWLLGGDRGVGGTFRNLWKDIVMALPSFFGLVHHVVGDGNDTYFWED

Query:  KWVGDRLLYLTFPHLFQLSS--------------MKNHSVADVKLPKKVEFFVWQVLHGRVNTFDRL-LRRNAPLFGPFCCILCRKAEKDLDHFLWSCDF
         W   R   L+   LF + S              +    +   K+P KV+   W V HG+VNT D+L LRR      P  CILC+   + +DH    C  
Subjt:  KWVGDRLLYLTFPHLFQLSS--------------MKNHSVADVKLPKKVEFFVWQVLHGRVNTFDRL-LRRNAPLFGPFCCILCRKAEKDLDHFLWSCDF

Query:  ARSSWDLFFDAFGQQRI---SYMDLRVLIEEFLLNPTLHGKGRFLW
            W+  F   G   +   S+ D+ V+  + L N     +G+ LW
Subjt:  ARSSWDLFFDAFGQQRI---SYMDLRVLIEEFLLNPTLHGKGRFLW

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATGGCCGACGGTGTTGCTTTGGGAATTTTGCCTTCATCATTTCAGATACTTTTTCAGCCCGTTCACGCTTGTGTAGTTCCACTATACGAGCCACCTTCATTGCAGTC
ATGCTTGTTGCTTGCTCCAGGACGAATGTGCTCTGATACCAATTTGTTAGGACTCCCAGAGATTGTGGGAAAACCCATTCACCTTGGAGGTCTAGAGATTGGTAACCTTA
GAACCCATAACAAAGCCCTATTAGCGAAATGGTTGTGGCATTTTACCCTTGAGGCGTCTTCCTTGTGGTACAAGATAATTGTGAGTAAATATGGTCCTCATCCTTCTGAG
TGGTTGCTAGGTGGGGACCGTGGGGTTGGTGGCACGTTTAGAAACTTGTGGAAAGATATTGTTATGGCGCTCCCCTCCTTTTTTGGTCTTGTGCATCATGTGGTTGGGGA
TGGGAATGATACGTATTTCTGGGAGGATAAGTGGGTGGGGGATAGACTCCTCTATCTTACTTTCCCTCATCTCTTTCAGTTGTCCTCCATGAAAAATCATTCAGTGGCTG
ACGTGAAACTGCCGAAGAAGGTTGAGTTTTTTGTCTGGCAAGTTCTCCATGGTAGGGTTAATACCTTTGATAGGCTCCTGAGAAGGAATGCCCCTTTGTTTGGCCCCTTT
TGTTGCATCCTTTGTCGGAAGGCGGAGAAAGATTTGGATCATTTTCTTTGGAGTTGTGATTTTGCCCGCTCCAGTTGGGACCTTTTCTTTGATGCATTTGGGCAGCAGCG
GATCAGCTACATGGATCTGAGAGTGTTGATCGAAGAGTTCCTCCTCAATCCGACCCTCCATGGCAAGGGAAGATTTTTATGGTAG
mRNA sequenceShow/hide mRNA sequence
ATGATGGCCGACGGTGTTGCTTTGGGAATTTTGCCTTCATCATTTCAGATACTTTTTCAGCCCGTTCACGCTTGTGTAGTTCCACTATACGAGCCACCTTCATTGCAGTC
ATGCTTGTTGCTTGCTCCAGGACGAATGTGCTCTGATACCAATTTGTTAGGACTCCCAGAGATTGTGGGAAAACCCATTCACCTTGGAGGTCTAGAGATTGGTAACCTTA
GAACCCATAACAAAGCCCTATTAGCGAAATGGTTGTGGCATTTTACCCTTGAGGCGTCTTCCTTGTGGTACAAGATAATTGTGAGTAAATATGGTCCTCATCCTTCTGAG
TGGTTGCTAGGTGGGGACCGTGGGGTTGGTGGCACGTTTAGAAACTTGTGGAAAGATATTGTTATGGCGCTCCCCTCCTTTTTTGGTCTTGTGCATCATGTGGTTGGGGA
TGGGAATGATACGTATTTCTGGGAGGATAAGTGGGTGGGGGATAGACTCCTCTATCTTACTTTCCCTCATCTCTTTCAGTTGTCCTCCATGAAAAATCATTCAGTGGCTG
ACGTGAAACTGCCGAAGAAGGTTGAGTTTTTTGTCTGGCAAGTTCTCCATGGTAGGGTTAATACCTTTGATAGGCTCCTGAGAAGGAATGCCCCTTTGTTTGGCCCCTTT
TGTTGCATCCTTTGTCGGAAGGCGGAGAAAGATTTGGATCATTTTCTTTGGAGTTGTGATTTTGCCCGCTCCAGTTGGGACCTTTTCTTTGATGCATTTGGGCAGCAGCG
GATCAGCTACATGGATCTGAGAGTGTTGATCGAAGAGTTCCTCCTCAATCCGACCCTCCATGGCAAGGGAAGATTTTTATGGTAG
Protein sequenceShow/hide protein sequence
MMADGVALGILPSSFQILFQPVHACVVPLYEPPSLQSCLLLAPGRMCSDTNLLGLPEIVGKPIHLGGLEIGNLRTHNKALLAKWLWHFTLEASSLWYKIIVSKYGPHPSE
WLLGGDRGVGGTFRNLWKDIVMALPSFFGLVHHVVGDGNDTYFWEDKWVGDRLLYLTFPHLFQLSSMKNHSVADVKLPKKVEFFVWQVLHGRVNTFDRLLRRNAPLFGPF
CCILCRKAEKDLDHFLWSCDFARSSWDLFFDAFGQQRISYMDLRVLIEEFLLNPTLHGKGRFLW