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Spg027964 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg027964
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
Descriptiontranslation initiation factor eIF-2B subunit beta-like
Genome locationscaffold2:44303467..44306668
RNA-Seq ExpressionSpg027964
SyntenySpg027964
Gene Ontology termsGO:0006413 - translational initiation (biological process)
GO:0050790 - regulation of catalytic activity (biological process)
GO:0005851 - eukaryotic translation initiation factor 2B complex (cellular component)
GO:0003743 - translation initiation factor activity (molecular function)
GO:0005085 - guanyl-nucleotide exchange factor activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6579110.1 E3 ubiquitin-protein ligase DIS1, partial [Cucurbita argyrosperma subsp. sororia]8.6e-3265.89Show/hide
Query:  RRREEEEERTEELLTFDFQFQNEAQIPLLQLAPELPSNLFISVAGGNPLLPHSILPYSLIMPDVLALVNDFVIKLKKHKIEGSLATAKHTAKLLRSVISQ
        +++   +E  + +LT     + + +          PSN FISVAGG    PH ILPYSLIMPDV ALVNDFVIKLKK KIEGSLATAKHTA+LLRSVIS 
Subjt:  RRREEEEERTEELLTFDFQFQNEAQIPLLQLAPELPSNLFISVAGGNPLLPHSILPYSLIMPDVLALVNDFVIKLKKHKIEGSLATAKHTAKLLRSVISQ

Query:  QRIPYTNQAAALIRAGKAVGEQLIAANPV
        QRIPYTNQAAALI A KAVGEQLIAANPV
Subjt:  QRIPYTNQAAALIRAGKAVGEQLIAANPV

KAG7032647.1 Translation initiation factor eIF-2B subunit beta [Cucurbita argyrosperma subsp. argyrosperma]1.6e-2291.3Show/hide
Query:  MPDVLALVNDFVIKLKKHKIEGSLATAKHTAKLLRSVISQQRIPYTNQAAALIRAGKAVGEQLIAANPV
        MPDV ALVNDFVIKLKK KIEGSLATAKHTA+LLRSVISQQRIPYTNQAAALI A K+VGEQLIAANPV
Subjt:  MPDVLALVNDFVIKLKKHKIEGSLATAKHTAKLLRSVISQQRIPYTNQAAALIRAGKAVGEQLIAANPV

XP_022923286.1 translation initiation factor eIF-2B subunit beta-like [Cucurbita moschata]7.3e-2392.75Show/hide
Query:  MPDVLALVNDFVIKLKKHKIEGSLATAKHTAKLLRSVISQQRIPYTNQAAALIRAGKAVGEQLIAANPV
        MPDV ALVNDFVIKLKK KIEGSLATAKHTA+LLRSVISQQRIPYTNQAAALI A KAVGEQLIAANPV
Subjt:  MPDVLALVNDFVIKLKKHKIEGSLATAKHTAKLLRSVISQQRIPYTNQAAALIRAGKAVGEQLIAANPV

XP_022990650.1 translation initiation factor eIF-2B subunit beta-like [Cucurbita maxima]7.3e-2392.75Show/hide
Query:  MPDVLALVNDFVIKLKKHKIEGSLATAKHTAKLLRSVISQQRIPYTNQAAALIRAGKAVGEQLIAANPV
        MPDV ALVNDFVIKLKK KIEGSLATAKHTA+LLRSVISQQRIPYTNQAAALI A KAVGEQLIAANPV
Subjt:  MPDVLALVNDFVIKLKKHKIEGSLATAKHTAKLLRSVISQQRIPYTNQAAALIRAGKAVGEQLIAANPV

XP_038874367.1 translation initiation factor eIF-2B subunit beta [Benincasa hispida]9.5e-2391.3Show/hide
Query:  MPDVLALVNDFVIKLKKHKIEGSLATAKHTAKLLRSVISQQRIPYTNQAAALIRAGKAVGEQLIAANPV
        MPDV ALVNDFVIKLK+ KIEGSLATAKHTA+LLRSVISQQRIPYTNQAAALI A KAVGEQLIAANPV
Subjt:  MPDVLALVNDFVIKLKKHKIEGSLATAKHTAKLLRSVISQQRIPYTNQAAALIRAGKAVGEQLIAANPV

TrEMBL top hitse value%identityAlignment
A0A1S3CPD3 translation initiation factor eIF-2B subunit beta1.8e-2291.3Show/hide
Query:  MPDVLALVNDFVIKLKKHKIEGSLATAKHTAKLLRSVISQQRIPYTNQAAALIRAGKAVGEQLIAANPV
        MPDV ALVNDFVIKLKK KIEGSLATAKHTA+LLRSVIS QRIPYTNQAAALI A KAVGEQLIAANPV
Subjt:  MPDVLALVNDFVIKLKKHKIEGSLATAKHTAKLLRSVISQQRIPYTNQAAALIRAGKAVGEQLIAANPV

A0A6J1E6E7 translation initiation factor eIF-2B subunit beta-like3.5e-2392.75Show/hide
Query:  MPDVLALVNDFVIKLKKHKIEGSLATAKHTAKLLRSVISQQRIPYTNQAAALIRAGKAVGEQLIAANPV
        MPDV ALVNDFVIKLKK KIEGSLATAKHTA+LLRSVISQQRIPYTNQAAALI A KAVGEQLIAANPV
Subjt:  MPDVLALVNDFVIKLKKHKIEGSLATAKHTAKLLRSVISQQRIPYTNQAAALIRAGKAVGEQLIAANPV

A0A6J1FNF3 translation initiation factor eIF-2B subunit beta-like1.3e-2291.3Show/hide
Query:  MPDVLALVNDFVIKLKKHKIEGSLATAKHTAKLLRSVISQQRIPYTNQAAALIRAGKAVGEQLIAANPV
        MPDV ALVNDFVIKLKK KIEGSLATAKHTA+LLRSVIS QRIPYTNQAAALI A KAVGEQLIAANPV
Subjt:  MPDVLALVNDFVIKLKKHKIEGSLATAKHTAKLLRSVISQQRIPYTNQAAALIRAGKAVGEQLIAANPV

A0A6J1JQN6 translation initiation factor eIF-2B subunit beta-like3.5e-2392.75Show/hide
Query:  MPDVLALVNDFVIKLKKHKIEGSLATAKHTAKLLRSVISQQRIPYTNQAAALIRAGKAVGEQLIAANPV
        MPDV ALVNDFVIKLKK KIEGSLATAKHTA+LLRSVISQQRIPYTNQAAALI A KAVGEQLIAANPV
Subjt:  MPDVLALVNDFVIKLKKHKIEGSLATAKHTAKLLRSVISQQRIPYTNQAAALIRAGKAVGEQLIAANPV

A0A6J1JUB9 translation initiation factor eIF-2B subunit beta-like1.3e-2291.3Show/hide
Query:  MPDVLALVNDFVIKLKKHKIEGSLATAKHTAKLLRSVISQQRIPYTNQAAALIRAGKAVGEQLIAANPV
        MPDV ALVNDFVIKLKK KIEGSLATAKHTA+LLRSVIS QRIPYTNQAAALI A KAVGEQLIAANPV
Subjt:  MPDVLALVNDFVIKLKKHKIEGSLATAKHTAKLLRSVISQQRIPYTNQAAALIRAGKAVGEQLIAANPV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G07300.1 NagB/RpiA/CoA transferase-like superfamily protein1.4e-1973.91Show/hide
Query:  MPDVLALVNDFVIKLKKHKIEGSLATAKHTAKLLRSVISQQRIPYTNQAAALIRAGKAVGEQLIAANPV
        MPDV + V +FV KL+K KIEGS ATAK+T +LLRSVIS QR+P+ NQAAALI A KAVGEQLIAANPV
Subjt:  MPDVLALVNDFVIKLKKHKIEGSLATAKHTAKLLRSVISQQRIPYTNQAAALIRAGKAVGEQLIAANPV

AT3G07300.2 NagB/RpiA/CoA transferase-like superfamily protein1.4e-1973.91Show/hide
Query:  MPDVLALVNDFVIKLKKHKIEGSLATAKHTAKLLRSVISQQRIPYTNQAAALIRAGKAVGEQLIAANPV
        MPDV + V +FV KL+K KIEGS ATAK+T +LLRSVIS QR+P+ NQAAALI A KAVGEQLIAANPV
Subjt:  MPDVLALVNDFVIKLKKHKIEGSLATAKHTAKLLRSVISQQRIPYTNQAAALIRAGKAVGEQLIAANPV

AT3G07300.3 NagB/RpiA/CoA transferase-like superfamily protein1.4e-1973.91Show/hide
Query:  MPDVLALVNDFVIKLKKHKIEGSLATAKHTAKLLRSVISQQRIPYTNQAAALIRAGKAVGEQLIAANPV
        MPDV + V +FV KL+K KIEGS ATAK+T +LLRSVIS QR+P+ NQAAALI A KAVGEQLIAANPV
Subjt:  MPDVLALVNDFVIKLKKHKIEGSLATAKHTAKLLRSVISQQRIPYTNQAAALIRAGKAVGEQLIAANPV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTTGACGCACCAGCACCACCAAGTCGCCGCAGAGAAGAAGAAGAAGAGAGAACTGAAGAACTTCTCACTTTCGACTTCCAGTTCCAGAACGAAGCGCAGATTCCATT
GTTGCAGCTCGCACCGGAGCTTCCTTCCAATCTCTTCATCTCTGTAGCCGGTGGCAACCCTCTTCTTCCCCATTCCATTCTTCCATATTCTCTGATTATGCCAGACGTGC
TAGCCCTTGTGAATGATTTCGTTATCAAGCTCAAGAAGCATAAAATTGAGGGCTCCTTGGCCACCGCGAAGCATACGGCTAAATTGCTTCGTTCTGTCATTTCGCAGCAG
CGAATACCCTACACGAACCAGGCGGCTGCTTTAATTCGTGCTGGGAAAGCTGTTGGCGAGCAGCTGATTGCTGCGAATCCTGTTGGTATACATTAA
mRNA sequenceShow/hide mRNA sequence
ATGTTTGACGCACCAGCACCACCAAGTCGCCGCAGAGAAGAAGAAGAAGAGAGAACTGAAGAACTTCTCACTTTCGACTTCCAGTTCCAGAACGAAGCGCAGATTCCATT
GTTGCAGCTCGCACCGGAGCTTCCTTCCAATCTCTTCATCTCTGTAGCCGGTGGCAACCCTCTTCTTCCCCATTCCATTCTTCCATATTCTCTGATTATGCCAGACGTGC
TAGCCCTTGTGAATGATTTCGTTATCAAGCTCAAGAAGCATAAAATTGAGGGCTCCTTGGCCACCGCGAAGCATACGGCTAAATTGCTTCGTTCTGTCATTTCGCAGCAG
CGAATACCCTACACGAACCAGGCGGCTGCTTTAATTCGTGCTGGGAAAGCTGTTGGCGAGCAGCTGATTGCTGCGAATCCTGTTGGTATACATTAA
Protein sequenceShow/hide protein sequence
MFDAPAPPSRRREEEEERTEELLTFDFQFQNEAQIPLLQLAPELPSNLFISVAGGNPLLPHSILPYSLIMPDVLALVNDFVIKLKKHKIEGSLATAKHTAKLLRSVISQQ
RIPYTNQAAALIRAGKAVGEQLIAANPVGIH