; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg028006 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg028006
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionFanconi-associated nuclease
Genome locationscaffold2:43793444..43803133
RNA-Seq ExpressionSpg028006
SyntenySpg028006
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
PON35554.1 hypothetical protein PanWU01x14_335450, partial [Parasponia andersonii]1.3e-1332.46Show/hide
Query:  VVREFYANIDEEEGFQVIVRGVVVDWSPGAINSLYNLQDFSHAGYNEMAAAPSNEQLNAAVREVGIEGAQWRLSKTENRTFQAAYLKKEANTWMGFIRS-
        +VREFYAN+ +     V VRGV V WS  AIN+++ L D     ++E     +   L   +  V + GA+W +S     T   + L   A  W  F++S 
Subjt:  VVREFYANIDEEEGFQVIVRGVVVDWSPGAINSLYNLQDFSHAGYNEMAAAPSNEQLNAAVREVGIEGAQWRLSKTENRTFQAAYLKKEANTWMGFIRS-

Query:  ------------------------LSIDVGKIIAGEIFGCWRKKVGKLFFPNTISMLCKRARVPESAEDVILLDKGLIDKPNLARLQRTQE
                                 SI+VG++I  EI  C  +K G LFFP+ I+ LC+ AR P    +  L + G ID   +AR+  TQE
Subjt:  ------------------------LSIDVGKIIAGEIFGCWRKKVGKLFFPNTISMLCKRARVPESAEDVILLDKGLIDKPNLARLQRTQE

PON46472.1 hypothetical protein PanWU01x14_251180, partial [Parasponia andersonii]7.5e-1432.26Show/hide
Query:  VVREFYANIDEEEGFQVIVRGVVVDWSPGAINSLYNLQDFSHAGYNEMAAAPSNEQLNAAVREVGIEGAQWRLSKTENRTFQAAYLKKEANTWMGFIRS-
        +VREFYAN+ + E   V VRGV V WS  AIN+++ L D     ++E     + + L   +  V   GA+W +S     T   + L   A  W  F++S 
Subjt:  VVREFYANIDEEEGFQVIVRGVVVDWSPGAINSLYNLQDFSHAGYNEMAAAPSNEQLNAAVREVGIEGAQWRLSKTENRTFQAAYLKKEANTWMGFIRS-

Query:  ------------------------LSIDVGKIIAGEIFGCWRKKVGKLFFPNTISMLCKRARVPESAEDVILLDKGLIDKPNLARL
                                 SI+VG++I  EI  C  +K G LFFP+ I+ LC+ AR P    +  L + G ID   +AR+
Subjt:  ------------------------LSIDVGKIIAGEIFGCWRKKVGKLFFPNTISMLCKRARVPESAEDVILLDKGLIDKPNLARL

PON78020.1 hypothetical protein PanWU01x14_023740 [Parasponia andersonii]2.2e-1332.37Show/hide
Query:  GRLPYERFINHFARVVREFYANIDEEEGFQVIVRGVVVDWSPGAINSLYNLQD--FSHAGYNEMAAAPSNEQLNAAVREVGIEGAQWRLSKTENRTFQAA
        G+LP+      F  +VREFYAN+ + E   + VRGV V WS  AIN+++ L D    H+ + E    P   +L   +  V   GA+W +S     T   +
Subjt:  GRLPYERFINHFARVVREFYANIDEEEGFQVIVRGVVVDWSPGAINSLYNLQD--FSHAGYNEMAAAPSNEQLNAAVREVGIEGAQWRLSKTENRTFQAA

Query:  YLKKEANTWMGFIRS-------------------------LSIDVGKIIAGEIFGCWRKKVGKLFFPNTISMLCKRARVPESAEDVILLDKGLIDKPNLA
         L   A  W  F++S                          SI+VG++I  EI  C  +K G LFFP+ I+ LC+ A  P    +  L + G ID   +A
Subjt:  YLKKEANTWMGFIRS-------------------------LSIDVGKIIAGEIFGCWRKKVGKLFFPNTISMLCKRARVPESAEDVILLDKGLIDKPNLA

Query:  RLQRTQE
        R+  TQE
Subjt:  RLQRTQE

TYH88163.1 hypothetical protein ES332_D01G168900v1 [Gossypium tomentosum]3.2e-1231.49Show/hide
Query:  YERFINHFA----RVVREFYANIDEEEGFQVIVRGVVVDWSPGAINSLYNLQDFSHAGYNEMAAAPSNEQLNAAVREVGIEGAQWRLSKTENRTFQAAYL
        +ERF N  +     +VREFYA++  ++  +VIVR   V  +  +IN L+NL D     Y  M    + + L   +  V   G+QW + K  + + +  YL
Subjt:  YERFINHFA----RVVREFYANIDEEEGFQVIVRGVVVDWSPGAINSLYNLQDFSHAGYNEMAAAPSNEQLNAAVREVGIEGAQWRLSKTENRTFQAAYL

Query:  KKEANTWMGFIR-------------------------SLSIDVGKIIAGEIFGCWRKKVGKLFFPNTISMLCKRARVPESA
        K  AN W  F++                           SI+VGKII  EI  C +KK G ++FP+ I+ LC +A V   A
Subjt:  KKEANTWMGFIR-------------------------SLSIDVGKIIAGEIFGCWRKKVGKLFFPNTISMLCKRARVPESA

XP_024995361.1 formin-like protein 3 [Cynara cardunculus var. scolymus]5.8e-1431.55Show/hide
Query:  VREFYANIDEEEGFQVIVRGVVVDWSPGAINSLYNLQDFSHAGYNEMAAAPSNEQLNAAVREVGIEGAQWRLSKTENRTFQAAYLKKEANTWMGFIR---
        VREF   +   +G ++ VR   V +SP AIN L  L   S++  + + A  ++E+L+  + +V  EG  W   K   R  +  YLK EAN W  F+R   
Subjt:  VREFYANIDEEEGFQVIVRGVVVDWSPGAINSLYNLQDFSHAGYNEMAAAPSNEQLNAAVREVGIEGAQWRLSKTENRTFQAAYLKKEANTWMGFIR---

Query:  ----------------------SLSIDVGKIIAGEIFGCWRKKVGKLFFPNTISMLCKRARVPESAEDVILLDKGLIDKPNLARLQR
                              +   DVG++I   I  C  +  GKL +P+ I  L ++A+V    +DV+ ++K  IDK NL RL R
Subjt:  ----------------------SLSIDVGKIIAGEIFGCWRKKVGKLFFPNTISMLCKRARVPESAEDVILLDKGLIDKPNLARLQR

TrEMBL top hitse value%identityAlignment
A0A2P5AGA5 Uncharacterized protein (Fragment)6.2e-1432.46Show/hide
Query:  VVREFYANIDEEEGFQVIVRGVVVDWSPGAINSLYNLQDFSHAGYNEMAAAPSNEQLNAAVREVGIEGAQWRLSKTENRTFQAAYLKKEANTWMGFIRS-
        +VREFYAN+ +     V VRGV V WS  AIN+++ L D     ++E     +   L   +  V + GA+W +S     T   + L   A  W  F++S 
Subjt:  VVREFYANIDEEEGFQVIVRGVVVDWSPGAINSLYNLQDFSHAGYNEMAAAPSNEQLNAAVREVGIEGAQWRLSKTENRTFQAAYLKKEANTWMGFIRS-

Query:  ------------------------LSIDVGKIIAGEIFGCWRKKVGKLFFPNTISMLCKRARVPESAEDVILLDKGLIDKPNLARLQRTQE
                                 SI+VG++I  EI  C  +K G LFFP+ I+ LC+ AR P    +  L + G ID   +AR+  TQE
Subjt:  ------------------------LSIDVGKIIAGEIFGCWRKKVGKLFFPNTISMLCKRARVPESAEDVILLDKGLIDKPNLARLQRTQE

A0A2P5BCG4 Uncharacterized protein (Fragment)3.6e-1432.26Show/hide
Query:  VVREFYANIDEEEGFQVIVRGVVVDWSPGAINSLYNLQDFSHAGYNEMAAAPSNEQLNAAVREVGIEGAQWRLSKTENRTFQAAYLKKEANTWMGFIRS-
        +VREFYAN+ + E   V VRGV V WS  AIN+++ L D     ++E     + + L   +  V   GA+W +S     T   + L   A  W  F++S 
Subjt:  VVREFYANIDEEEGFQVIVRGVVVDWSPGAINSLYNLQDFSHAGYNEMAAAPSNEQLNAAVREVGIEGAQWRLSKTENRTFQAAYLKKEANTWMGFIRS-

Query:  ------------------------LSIDVGKIIAGEIFGCWRKKVGKLFFPNTISMLCKRARVPESAEDVILLDKGLIDKPNLARL
                                 SI+VG++I  EI  C  +K G LFFP+ I+ LC+ AR P    +  L + G ID   +AR+
Subjt:  ------------------------LSIDVGKIIAGEIFGCWRKKVGKLFFPNTISMLCKRARVPESAEDVILLDKGLIDKPNLARL

A0A2P5DXM3 Uncharacterized protein1.1e-1332.37Show/hide
Query:  GRLPYERFINHFARVVREFYANIDEEEGFQVIVRGVVVDWSPGAINSLYNLQD--FSHAGYNEMAAAPSNEQLNAAVREVGIEGAQWRLSKTENRTFQAA
        G+LP+      F  +VREFYAN+ + E   + VRGV V WS  AIN+++ L D    H+ + E    P   +L   +  V   GA+W +S     T   +
Subjt:  GRLPYERFINHFARVVREFYANIDEEEGFQVIVRGVVVDWSPGAINSLYNLQD--FSHAGYNEMAAAPSNEQLNAAVREVGIEGAQWRLSKTENRTFQAA

Query:  YLKKEANTWMGFIRS-------------------------LSIDVGKIIAGEIFGCWRKKVGKLFFPNTISMLCKRARVPESAEDVILLDKGLIDKPNLA
         L   A  W  F++S                          SI+VG++I  EI  C  +K G LFFP+ I+ LC+ A  P    +  L + G ID   +A
Subjt:  YLKKEANTWMGFIRS-------------------------LSIDVGKIIAGEIFGCWRKKVGKLFFPNTISMLCKRARVPESAEDVILLDKGLIDKPNLA

Query:  RLQRTQE
        R+  TQE
Subjt:  RLQRTQE

A0A5D2MA47 Uncharacterized protein1.5e-1231.49Show/hide
Query:  YERFINHFA----RVVREFYANIDEEEGFQVIVRGVVVDWSPGAINSLYNLQDFSHAGYNEMAAAPSNEQLNAAVREVGIEGAQWRLSKTENRTFQAAYL
        +ERF N  +     +VREFYA++  ++  +VIVR   V  +  +IN L+NL D     Y  M    + + L   +  V   G+QW + K  + + +  YL
Subjt:  YERFINHFA----RVVREFYANIDEEEGFQVIVRGVVVDWSPGAINSLYNLQDFSHAGYNEMAAAPSNEQLNAAVREVGIEGAQWRLSKTENRTFQAAYL

Query:  KKEANTWMGFIR-------------------------SLSIDVGKIIAGEIFGCWRKKVGKLFFPNTISMLCKRARVPESA
        K  AN W  F++                           SI+VGKII  EI  C +KK G ++FP+ I+ LC +A V   A
Subjt:  KKEANTWMGFIR-------------------------SLSIDVGKIIAGEIFGCWRKKVGKLFFPNTISMLCKRARVPESA

A0A6A2YMQ9 Uncharacterized protein2.0e-1228.95Show/hide
Query:  LPYERFINH----FARVVREFYANIDEEEGFQVIVRGVVVDWSPGAINSLYNLQDF--SHAGYNEMAAAPSNEQLNAAVREVGIEGAQWRLSKTENRTFQ
        L +++F  H     A VV+EFYANI +     + VRG  + ++P AI   ++LQD   +HA + E A + + +++   + ++  E  +W   +T   +  
Subjt:  LPYERFINH----FARVVREFYANIDEEEGFQVIVRGVVVDWSPGAINSLYNLQDF--SHAGYNEMAAAPSNEQLNAAVREVGIEGAQWRLSKTENRTFQ

Query:  AAYLKKEANTWMGFIR-------------------------SLSIDVGKIIAGEIFGCWRKKVGKLFFPNTISMLCKRARVPESAEDVIL
           L+  A  W  F++                         S  IDVG+II  ++  C  KK   L FPN I+ LC++ +V E+A D IL
Subjt:  AAYLKKEANTWMGFIR-------------------------SLSIDVGKIIAGEIFGCWRKKVGKLFFPNTISMLCKRARVPESAEDVIL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTTAATTCAACTCAAGGTTCGGGTCAGTTCCCAGCGGTTGATTTGGCTGCAACACACGATTCTGCTGGGGATCAGCTTGATCTTCTGGAATTTCCAGGAGACGCGAC
ACCTCTCAAATCATCCCTGAAACTAAGAGATGGTGTTCATACCGGCTGGCCAGACGGGCACAAAATAGGAATAGACACTACAAATAAAGAAGTGGATGAGGATATTCTTG
TTACGCCTGAAGCTCTGAAGAACAAGGTGAAGAAGAAAAGAACGCTTGCAGAAAGAGAAGCCAAACGGCTTAAAAAACTACAAGAGGCTGAAGTTTCTGAAGTTTTACAA
AAGGTCATCGAGGACATTGCAGAAGAAGTAGTCGCTGAGGAAGAACCGAAAGATTCTAAAAAAGAAAAAGATCCTGAGAAGATGGTTGAAGCAGAGCAAGAGGGTCATGA
AAATGCAGCAACGGGTTTGCAAGAGCAAGGCGCAGAGGGTGAAGCAGAGGTGGCAAGGCCAGAGGAAGGGAGGTTGCCATATGAGCGCTTTATCAATCATTTTGCGAGGG
TGGTGCGCGAATTTTATGCGAACATCGACGAGGAAGAAGGTTTTCAAGTGATTGTTCGTGGAGTGGTTGTCGACTGGAGTCCTGGAGCCATCAATTCACTGTACAACCTT
CAAGATTTCTCACATGCTGGTTATAATGAGATGGCGGCAGCGCCATCTAACGAGCAGTTAAATGCTGCTGTTCGGGAAGTAGGAATAGAAGGAGCACAGTGGCGACTATC
GAAAACTGAGAACAGGACCTTCCAGGCTGCTTATTTGAAGAAGGAAGCCAATACTTGGATGGGATTTATCAGGTCTCTTAGCATCGACGTGGGTAAAATTATCGCGGGTG
AGATTTTTGGATGTTGGCGTAAGAAGGTTGGGAAATTGTTCTTTCCAAACACAATTTCAATGTTATGTAAGAGAGCAAGGGTTCCAGAAAGCGCAGAAGATGTGATTCTA
CTGGATAAGGGACTAATTGACAAGCCTAACTTGGCACGACTTCAACGAACGCAAGAGGCACGTCAAGGGGGGCTGCAGTGCTTGGTTTTGCAGAATGCTCAGGTAAAGGT
TGAAGGTAGTGTTGGATTATCTGCTTTGATTGAGTTATGCTATGACTAA
mRNA sequenceShow/hide mRNA sequence
ATGGTTAATTCAACTCAAGGTTCGGGTCAGTTCCCAGCGGTTGATTTGGCTGCAACACACGATTCTGCTGGGGATCAGCTTGATCTTCTGGAATTTCCAGGAGACGCGAC
ACCTCTCAAATCATCCCTGAAACTAAGAGATGGTGTTCATACCGGCTGGCCAGACGGGCACAAAATAGGAATAGACACTACAAATAAAGAAGTGGATGAGGATATTCTTG
TTACGCCTGAAGCTCTGAAGAACAAGGTGAAGAAGAAAAGAACGCTTGCAGAAAGAGAAGCCAAACGGCTTAAAAAACTACAAGAGGCTGAAGTTTCTGAAGTTTTACAA
AAGGTCATCGAGGACATTGCAGAAGAAGTAGTCGCTGAGGAAGAACCGAAAGATTCTAAAAAAGAAAAAGATCCTGAGAAGATGGTTGAAGCAGAGCAAGAGGGTCATGA
AAATGCAGCAACGGGTTTGCAAGAGCAAGGCGCAGAGGGTGAAGCAGAGGTGGCAAGGCCAGAGGAAGGGAGGTTGCCATATGAGCGCTTTATCAATCATTTTGCGAGGG
TGGTGCGCGAATTTTATGCGAACATCGACGAGGAAGAAGGTTTTCAAGTGATTGTTCGTGGAGTGGTTGTCGACTGGAGTCCTGGAGCCATCAATTCACTGTACAACCTT
CAAGATTTCTCACATGCTGGTTATAATGAGATGGCGGCAGCGCCATCTAACGAGCAGTTAAATGCTGCTGTTCGGGAAGTAGGAATAGAAGGAGCACAGTGGCGACTATC
GAAAACTGAGAACAGGACCTTCCAGGCTGCTTATTTGAAGAAGGAAGCCAATACTTGGATGGGATTTATCAGGTCTCTTAGCATCGACGTGGGTAAAATTATCGCGGGTG
AGATTTTTGGATGTTGGCGTAAGAAGGTTGGGAAATTGTTCTTTCCAAACACAATTTCAATGTTATGTAAGAGAGCAAGGGTTCCAGAAAGCGCAGAAGATGTGATTCTA
CTGGATAAGGGACTAATTGACAAGCCTAACTTGGCACGACTTCAACGAACGCAAGAGGCACGTCAAGGGGGGCTGCAGTGCTTGGTTTTGCAGAATGCTCAGGTAAAGGT
TGAAGGTAGTGTTGGATTATCTGCTTTGATTGAGTTATGCTATGACTAA
Protein sequenceShow/hide protein sequence
MVNSTQGSGQFPAVDLAATHDSAGDQLDLLEFPGDATPLKSSLKLRDGVHTGWPDGHKIGIDTTNKEVDEDILVTPEALKNKVKKKRTLAEREAKRLKKLQEAEVSEVLQ
KVIEDIAEEVVAEEEPKDSKKEKDPEKMVEAEQEGHENAATGLQEQGAEGEAEVARPEEGRLPYERFINHFARVVREFYANIDEEEGFQVIVRGVVVDWSPGAINSLYNL
QDFSHAGYNEMAAAPSNEQLNAAVREVGIEGAQWRLSKTENRTFQAAYLKKEANTWMGFIRSLSIDVGKIIAGEIFGCWRKKVGKLFFPNTISMLCKRARVPESAEDVIL
LDKGLIDKPNLARLQRTQEARQGGLQCLVLQNAQVKVEGSVGLSALIELCYD