; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg028079 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg028079
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionExonuclease domain-containing protein
Genome locationscaffold2:47018561..47019862
RNA-Seq ExpressionSpg028079
SyntenySpg028079
Gene Ontology termsGO:0000738 - DNA catabolic process, exonucleolytic (biological process)
GO:0005737 - cytoplasm (cellular component)
GO:0003676 - nucleic acid binding (molecular function)
GO:0008296 - 3'-5'-exodeoxyribonuclease activity (molecular function)
InterPro domainsIPR012337 - Ribonuclease H-like superfamily
IPR013520 - Exonuclease, RNase T/DNA polymerase III
IPR036397 - Ribonuclease H superfamily
IPR040393 - Three-prime repair exonuclease 1/2


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6590475.1 Exonuclease DPD1, chloroplastic/mitochondrial, partial [Cucurbita argyrosperma subsp. sororia]2.4e-15785.24Show/hide
Query:  MITVPMCFSILRVPKFGVHTLSNLWRENFHPLNRNYGHSSWYGQLGFRIYNLEDGQNKRWTRKSVTTKAGRKAKTHPSRKPSDIRNEILEESVSTSCIVS
        MIT PMCFSILRVPKFGV TL+NLWRENFHPLNRNYGHSSWY QLGFRIYNLE GQ+KRWTRKS++TKAGRKAKT PS KPS+IRNEILEESVSTSC VS
Subjt:  MITVPMCFSILRVPKFGVHTLSNLWRENFHPLNRNYGHSSWYGQLGFRIYNLEDGQNKRWTRKSVTTKAGRKAKTHPSRKPSDIRNEILEESVSTSCIVS

Query:  INKTEKSETQKLQYCDIQQTIIENKDLACRVTVIIFDIETTGFSRNKDRIVEIAFRDLSGGENSTFQTLINPECYIPNSDLHGITNRMVSRPEVPRMEEL
        INK+EK+ TQKLQ C+IQ+TI+++K+LA  VTVI FDIETTGFSR  DRIVEIA +DLSGGENSTFQTLINPECYIPN+ +HGIT+RMVSRP+VPRM+EL
Subjt:  INKTEKSETQKLQYCDIQQTIIENKDLACRVTVIIFDIETTGFSRNKDRIVEIAFRDLSGGENSTFQTLINPECYIPNSDLHGITNRMVSRPEVPRMEEL

Query:  IPILLQFVKSRQKPDGYVLLVAHNARAFDVPFLLKEFSRCSVDIPENWLFFDNMILARQLMKSSDSKITRMSLQALREYYDIPLVGSAHRAMSDVMSLSR
        IPILLQF+KSRQKPDGYVLLVAHNAR FDVPFLLKEFSRCSVDIP NWLFFDN++LARQLMKS+DSKIT++SLQALREYY+IPLVGSAHRAMSDV +LS 
Subjt:  IPILLQFVKSRQKPDGYVLLVAHNARAFDVPFLLKEFSRCSVDIPENWLFFDNMILARQLMKSSDSKITRMSLQALREYYDIPLVGSAHRAMSDVMSLSR

Query:  ILQRLTFDLKLGISDLIERSFTASDLINKKKN
        ILQRLTFDLKLGI DLIERSFT SDLINKKKN
Subjt:  ILQRLTFDLKLGISDLIERSFTASDLINKKKN

XP_022135594.1 exonuclease DPD1, chloroplastic/mitochondrial [Momordica charantia]7.7e-15684.94Show/hide
Query:  MITVPMCFSILRVPKFGVHTLSNLWRENFHPLNRNYGHSSWYGQLGFRIYNLEDGQNKRWTRKSVTTKAGRKAKTHPSRKPSDIRNEILEESVSTSCIVS
        MITVPMCFSILRVPKFGVHTL+N WR NFHPLNRNYGHSSWY QL FRIYNLE GQNKRWTRKS+TTKAGRK K +PS KPSDIRNEILE SVSTSC VS
Subjt:  MITVPMCFSILRVPKFGVHTLSNLWRENFHPLNRNYGHSSWYGQLGFRIYNLEDGQNKRWTRKSVTTKAGRKAKTHPSRKPSDIRNEILEESVSTSCIVS

Query:  INKTEKSETQKLQYCDIQQTIIENKDLACRVTVIIFDIETTGFSRNKDRIVEIAFRDLSGGENSTFQTLINPECYIPNSDLHGITNRMVSRPEVPRMEEL
        INKTEKSETQKLQYCDIQQT  + K+L   VTVI FDIETTGFSR KDRIVEIAF+DLSGGENSTFQTLINPECYIPNS +HGIT+RMVSRP+VPRM++L
Subjt:  INKTEKSETQKLQYCDIQQTIIENKDLACRVTVIIFDIETTGFSRNKDRIVEIAFRDLSGGENSTFQTLINPECYIPNSDLHGITNRMVSRPEVPRMEEL

Query:  IPILLQFVKSRQKPDGYVLLVAHNARAFDVPFLLKEFSRCSVDIPENWLFFDNMILARQLMKSSDSKITRMSLQALREYYDIPLVGSAHRAMSDVMSLSR
        IPILLQFV SRQKPDGY+LLVAHNAR FDVPFLL EFSRCS DIP++WLF DNMILARQLM SSDSK++++SLQALREYY IPLVGSAHRAMSDVMSLS 
Subjt:  IPILLQFVKSRQKPDGYVLLVAHNARAFDVPFLLKEFSRCSVDIPENWLFFDNMILARQLMKSSDSKITRMSLQALREYYDIPLVGSAHRAMSDVMSLSR

Query:  ILQRLTFDLKLGISDLIERSFTASDLINKKKN
        ILQRLTFDLKL I DLIERSFTASDLI K K+
Subjt:  ILQRLTFDLKLGISDLIERSFTASDLINKKKN

XP_022961373.1 exonuclease DPD1, chloroplastic/mitochondrial [Cucurbita moschata]9.0e-15784.94Show/hide
Query:  MITVPMCFSILRVPKFGVHTLSNLWRENFHPLNRNYGHSSWYGQLGFRIYNLEDGQNKRWTRKSVTTKAGRKAKTHPSRKPSDIRNEILEESVSTSCIVS
        MIT PMCFSILRVPKFGV TL+NLWRENFHPLNRNYGHSSWY QLGFR YNLE GQ+KRWTRKS++TKAGRKAKT PS KPS+IRNEILEESVSTSC VS
Subjt:  MITVPMCFSILRVPKFGVHTLSNLWRENFHPLNRNYGHSSWYGQLGFRIYNLEDGQNKRWTRKSVTTKAGRKAKTHPSRKPSDIRNEILEESVSTSCIVS

Query:  INKTEKSETQKLQYCDIQQTIIENKDLACRVTVIIFDIETTGFSRNKDRIVEIAFRDLSGGENSTFQTLINPECYIPNSDLHGITNRMVSRPEVPRMEEL
        INK+EK+ TQKLQ C+IQ+TI+++K+LA  VTVI FDIETTGFSR  DRIVEIA +DLSGGENSTFQTLINPECYIPN+ +HGIT+RMVSRP+VPRM+EL
Subjt:  INKTEKSETQKLQYCDIQQTIIENKDLACRVTVIIFDIETTGFSRNKDRIVEIAFRDLSGGENSTFQTLINPECYIPNSDLHGITNRMVSRPEVPRMEEL

Query:  IPILLQFVKSRQKPDGYVLLVAHNARAFDVPFLLKEFSRCSVDIPENWLFFDNMILARQLMKSSDSKITRMSLQALREYYDIPLVGSAHRAMSDVMSLSR
        IPILLQF+KSRQKPDGYVLLVAHNAR FDVPFLLKEFSRCSVDIP NWLFFDN++LARQLMKS+DSKIT++SLQALREYY+IPLVGSAHRAMSDV +LS 
Subjt:  IPILLQFVKSRQKPDGYVLLVAHNARAFDVPFLLKEFSRCSVDIPENWLFFDNMILARQLMKSSDSKITRMSLQALREYYDIPLVGSAHRAMSDVMSLSR

Query:  ILQRLTFDLKLGISDLIERSFTASDLINKKKN
        ILQRLTFDLKLGI DLIERSFT SDLINKKKN
Subjt:  ILQRLTFDLKLGISDLIERSFTASDLINKKKN

XP_022968752.1 exonuclease DPD1, chloroplastic/mitochondrial [Cucurbita maxima]3.4e-15685.8Show/hide
Query:  MITVPMCFSILRVPKFGVHTLSNLWRENFHPLNRNYGHSSWYGQLGFRIYNLEDGQNKRWTRKSVTTKAGRKAKTHPSRKPSDIRNEILEESVSTSCIVS
        MIT  MCFSILRVPKFGV TL+NLWRENFHPLNRNYGHSSWY QLGFRIYNLE GQ+KRWTRKS+TTKAGRKAKT+PS KPS+IRNEILEESVSTSC VS
Subjt:  MITVPMCFSILRVPKFGVHTLSNLWRENFHPLNRNYGHSSWYGQLGFRIYNLEDGQNKRWTRKSVTTKAGRKAKTHPSRKPSDIRNEILEESVSTSCIVS

Query:  INKTEKSETQKLQYCDIQQTIIENKDLACRVTVIIFDIETTGFSRNKDRIVEIAFRDLSGGENSTFQTLINPECYIPNSDLHGITNRMVSRPEVPRMEEL
        INK+EK  TQKLQ C+IQ+TII++K+LA  VTVI FDIETTGFSR  DRIVEIA +DLSGGENSTFQTLINPECYIPN+ +HGIT+RMVSRP+VPRM+EL
Subjt:  INKTEKSETQKLQYCDIQQTIIENKDLACRVTVIIFDIETTGFSRNKDRIVEIAFRDLSGGENSTFQTLINPECYIPNSDLHGITNRMVSRPEVPRMEEL

Query:  IPILLQFVKSRQKPDGYVLLVAHNARAFDVPFLLKEFSRCSVDIPENWLFFDNMILARQLMKSSDSKITRMSLQALREYYDIPLVGSAHRAMSDVMSLSR
        IPILLQFVKSRQKPDGYVLLVAHNAR FDVPFLLKEFSRCSVDIP NWLFFDN++LARQLMKS+DSKIT++SLQALREYY+IPLVGSAHRAMSDV +LS 
Subjt:  IPILLQFVKSRQKPDGYVLLVAHNARAFDVPFLLKEFSRCSVDIPENWLFFDNMILARQLMKSSDSKITRMSLQALREYYDIPLVGSAHRAMSDVMSLSR

Query:  ILQRLTFDLKLGISDLIERSFTASDLINKKK
        ILQRLTFDLKLGI DLIERSFT SDLINKKK
Subjt:  ILQRLTFDLKLGISDLIERSFTASDLINKKK

XP_023515555.1 exonuclease DPD1, chloroplastic/mitochondrial [Cucurbita pepo subsp. pepo]1.2e-15684.94Show/hide
Query:  MITVPMCFSILRVPKFGVHTLSNLWRENFHPLNRNYGHSSWYGQLGFRIYNLEDGQNKRWTRKSVTTKAGRKAKTHPSRKPSDIRNEILEESVSTSCIVS
        MIT PMCFSILRVPKFGV TL+NLWRENFHPLNRNYGHSSWY QLGFRIYNLE GQNKRWTRKS++TKAGRKAKT PS KPS+IRNEILEESVSTSC +S
Subjt:  MITVPMCFSILRVPKFGVHTLSNLWRENFHPLNRNYGHSSWYGQLGFRIYNLEDGQNKRWTRKSVTTKAGRKAKTHPSRKPSDIRNEILEESVSTSCIVS

Query:  INKTEKSETQKLQYCDIQQTIIENKDLACRVTVIIFDIETTGFSRNKDRIVEIAFRDLSGGENSTFQTLINPECYIPNSDLHGITNRMVSRPEVPRMEEL
        INK+EK+ TQKLQ C+IQ+TI ++K+LA  VTVI FDIETTGFSR  DRIVEIA +DLSGGENSTFQTLINPECYIPN+ +HGIT+RMVSRP+VPRM+EL
Subjt:  INKTEKSETQKLQYCDIQQTIIENKDLACRVTVIIFDIETTGFSRNKDRIVEIAFRDLSGGENSTFQTLINPECYIPNSDLHGITNRMVSRPEVPRMEEL

Query:  IPILLQFVKSRQKPDGYVLLVAHNARAFDVPFLLKEFSRCSVDIPENWLFFDNMILARQLMKSSDSKITRMSLQALREYYDIPLVGSAHRAMSDVMSLSR
        IPILLQF+KSRQKPDGYVLLVAHNAR FDVPFLLKEFSRCSVDIP NWLFFDN++LARQLMKS+DSKI ++SLQALREYY+IPLVGSAHRAMSDV +LS 
Subjt:  IPILLQFVKSRQKPDGYVLLVAHNARAFDVPFLLKEFSRCSVDIPENWLFFDNMILARQLMKSSDSKITRMSLQALREYYDIPLVGSAHRAMSDVMSLSR

Query:  ILQRLTFDLKLGISDLIERSFTASDLINKKKN
        ILQRLTFDLKLGI DLIERSFT SDLINKKKN
Subjt:  ILQRLTFDLKLGISDLIERSFTASDLINKKKN

TrEMBL top hitse value%identityAlignment
A0A0A0LVY3 Exonuclease domain-containing protein6.4e-14077.91Show/hide
Query:  MCFSILRVPKFGVHTLSNLWRENFHPLNRNYGHSSWYGQLGFRIYNLEDGQNKRWTRKSVTTKAGRKAKTHPSRKPSDIRNEILEESVSTSCIVSINKTE
        MC SI R PK+GV  L+NLWRENFHPLNRN+GH+ WY QL FRIYNLE G+NKRWTRKS+TTKAG KAKT+PS KP++IRNEIL+ES+  SC V+INK+E
Subjt:  MCFSILRVPKFGVHTLSNLWRENFHPLNRNYGHSSWYGQLGFRIYNLEDGQNKRWTRKSVTTKAGRKAKTHPSRKPSDIRNEILEESVSTSCIVSINKTE

Query:  KSETQKLQYCDIQQTIIENKDLACRVTVIIFDIETTGFSRNKDRIVEIAFRDLSGGENSTFQTLINPECYIPNSDLHGITNRMVSRPEVPRMEELIPILL
        KSETQKLQYCDIQ TII++K+ A  VTVI FDIETTGFSRN DRIVEIAF+DLSGGENSTFQTLINP+CYI NS++HGI+NRMV  P VPRM+ELIPI+L
Subjt:  KSETQKLQYCDIQQTIIENKDLACRVTVIIFDIETTGFSRNKDRIVEIAFRDLSGGENSTFQTLINPECYIPNSDLHGITNRMVSRPEVPRMEELIPILL

Query:  QFVKSRQKPDGYVLLVAHNARAFDVPFLLKEFSRCSVDIPENWLFFDNMILARQLMKSSDSKITRMSLQALREYYDIPLVGSAHRAMSDVMSLSRILQRL
        QFVKSRQKP GYVLLVAHNAR FDVPFLL EFSR SVDIP NWLFFD M LARQLMK SDSKIT+++LQAL EYY I L G AHRA+SDV  LS ILQRL
Subjt:  QFVKSRQKPDGYVLLVAHNARAFDVPFLLKEFSRCSVDIPENWLFFDNMILARQLMKSSDSKITRMSLQALREYYDIPLVGSAHRAMSDVMSLSRILQRL

Query:  TFDLKLGISDLIERSFTASDLINKKK
        TFDLKL ISDL+ER+FT  DLINKKK
Subjt:  TFDLKLGISDLIERSFTASDLINKKK

A0A0N9LRH7 Exonuclease DPD11.4e-13977.91Show/hide
Query:  MCFSILRVPKFGVHTLSNLWRENFHPLNRNYGHSSWYGQLGFRIYNLEDGQNKRWTRKSVTTKAGRKAKTHPSRKPSDIRNEILEESVSTSCIVSINKTE
        MC SI R PK+GV  L+NLWRENFHPLNRN+GH+ WY QL FRIYNLE G+NKRWTRKS+TTKAG KAKT+PS KP++IRNEIL+ESV  SC V+INK+E
Subjt:  MCFSILRVPKFGVHTLSNLWRENFHPLNRNYGHSSWYGQLGFRIYNLEDGQNKRWTRKSVTTKAGRKAKTHPSRKPSDIRNEILEESVSTSCIVSINKTE

Query:  KSETQKLQYCDIQQTIIENKDLACRVTVIIFDIETTGFSRNKDRIVEIAFRDLSGGENSTFQTLINPECYIPNSDLHGITNRMVSRPEVPRMEELIPILL
        KSETQKLQYCDIQ TII++K+ A  VTVI FDIETTGFSRN DRIVEIAF+DLSGGENSTFQTLINP+CYI NS++HGI+NRMV  P VP M+ELIPI+L
Subjt:  KSETQKLQYCDIQQTIIENKDLACRVTVIIFDIETTGFSRNKDRIVEIAFRDLSGGENSTFQTLINPECYIPNSDLHGITNRMVSRPEVPRMEELIPILL

Query:  QFVKSRQKPDGYVLLVAHNARAFDVPFLLKEFSRCSVDIPENWLFFDNMILARQLMKSSDSKITRMSLQALREYYDIPLVGSAHRAMSDVMSLSRILQRL
        QFVKSRQKP GYVLLVAHNAR FDVPFLL EFSR SVDIP NWLFFD M LARQLMK SDSKIT+++LQAL EYY I L G AHRA+SDV  LS ILQRL
Subjt:  QFVKSRQKPDGYVLLVAHNARAFDVPFLLKEFSRCSVDIPENWLFFDNMILARQLMKSSDSKITRMSLQALREYYDIPLVGSAHRAMSDVMSLSRILQRL

Query:  TFDLKLGISDLIERSFTASDLINKKK
        TFDLKL ISDL+ER+FT  DLINKKK
Subjt:  TFDLKLGISDLIERSFTASDLINKKK

A0A6J1C1V8 exonuclease DPD1, chloroplastic/mitochondrial3.7e-15684.94Show/hide
Query:  MITVPMCFSILRVPKFGVHTLSNLWRENFHPLNRNYGHSSWYGQLGFRIYNLEDGQNKRWTRKSVTTKAGRKAKTHPSRKPSDIRNEILEESVSTSCIVS
        MITVPMCFSILRVPKFGVHTL+N WR NFHPLNRNYGHSSWY QL FRIYNLE GQNKRWTRKS+TTKAGRK K +PS KPSDIRNEILE SVSTSC VS
Subjt:  MITVPMCFSILRVPKFGVHTLSNLWRENFHPLNRNYGHSSWYGQLGFRIYNLEDGQNKRWTRKSVTTKAGRKAKTHPSRKPSDIRNEILEESVSTSCIVS

Query:  INKTEKSETQKLQYCDIQQTIIENKDLACRVTVIIFDIETTGFSRNKDRIVEIAFRDLSGGENSTFQTLINPECYIPNSDLHGITNRMVSRPEVPRMEEL
        INKTEKSETQKLQYCDIQQT  + K+L   VTVI FDIETTGFSR KDRIVEIAF+DLSGGENSTFQTLINPECYIPNS +HGIT+RMVSRP+VPRM++L
Subjt:  INKTEKSETQKLQYCDIQQTIIENKDLACRVTVIIFDIETTGFSRNKDRIVEIAFRDLSGGENSTFQTLINPECYIPNSDLHGITNRMVSRPEVPRMEEL

Query:  IPILLQFVKSRQKPDGYVLLVAHNARAFDVPFLLKEFSRCSVDIPENWLFFDNMILARQLMKSSDSKITRMSLQALREYYDIPLVGSAHRAMSDVMSLSR
        IPILLQFV SRQKPDGY+LLVAHNAR FDVPFLL EFSRCS DIP++WLF DNMILARQLM SSDSK++++SLQALREYY IPLVGSAHRAMSDVMSLS 
Subjt:  IPILLQFVKSRQKPDGYVLLVAHNARAFDVPFLLKEFSRCSVDIPENWLFFDNMILARQLMKSSDSKITRMSLQALREYYDIPLVGSAHRAMSDVMSLSR

Query:  ILQRLTFDLKLGISDLIERSFTASDLINKKKN
        ILQRLTFDLKL I DLIERSFTASDLI K K+
Subjt:  ILQRLTFDLKLGISDLIERSFTASDLINKKKN

A0A6J1HDU6 exonuclease DPD1, chloroplastic/mitochondrial4.4e-15784.94Show/hide
Query:  MITVPMCFSILRVPKFGVHTLSNLWRENFHPLNRNYGHSSWYGQLGFRIYNLEDGQNKRWTRKSVTTKAGRKAKTHPSRKPSDIRNEILEESVSTSCIVS
        MIT PMCFSILRVPKFGV TL+NLWRENFHPLNRNYGHSSWY QLGFR YNLE GQ+KRWTRKS++TKAGRKAKT PS KPS+IRNEILEESVSTSC VS
Subjt:  MITVPMCFSILRVPKFGVHTLSNLWRENFHPLNRNYGHSSWYGQLGFRIYNLEDGQNKRWTRKSVTTKAGRKAKTHPSRKPSDIRNEILEESVSTSCIVS

Query:  INKTEKSETQKLQYCDIQQTIIENKDLACRVTVIIFDIETTGFSRNKDRIVEIAFRDLSGGENSTFQTLINPECYIPNSDLHGITNRMVSRPEVPRMEEL
        INK+EK+ TQKLQ C+IQ+TI+++K+LA  VTVI FDIETTGFSR  DRIVEIA +DLSGGENSTFQTLINPECYIPN+ +HGIT+RMVSRP+VPRM+EL
Subjt:  INKTEKSETQKLQYCDIQQTIIENKDLACRVTVIIFDIETTGFSRNKDRIVEIAFRDLSGGENSTFQTLINPECYIPNSDLHGITNRMVSRPEVPRMEEL

Query:  IPILLQFVKSRQKPDGYVLLVAHNARAFDVPFLLKEFSRCSVDIPENWLFFDNMILARQLMKSSDSKITRMSLQALREYYDIPLVGSAHRAMSDVMSLSR
        IPILLQF+KSRQKPDGYVLLVAHNAR FDVPFLLKEFSRCSVDIP NWLFFDN++LARQLMKS+DSKIT++SLQALREYY+IPLVGSAHRAMSDV +LS 
Subjt:  IPILLQFVKSRQKPDGYVLLVAHNARAFDVPFLLKEFSRCSVDIPENWLFFDNMILARQLMKSSDSKITRMSLQALREYYDIPLVGSAHRAMSDVMSLSR

Query:  ILQRLTFDLKLGISDLIERSFTASDLINKKKN
        ILQRLTFDLKLGI DLIERSFT SDLINKKKN
Subjt:  ILQRLTFDLKLGISDLIERSFTASDLINKKKN

A0A6J1HUD7 exonuclease DPD1, chloroplastic/mitochondrial1.7e-15685.8Show/hide
Query:  MITVPMCFSILRVPKFGVHTLSNLWRENFHPLNRNYGHSSWYGQLGFRIYNLEDGQNKRWTRKSVTTKAGRKAKTHPSRKPSDIRNEILEESVSTSCIVS
        MIT  MCFSILRVPKFGV TL+NLWRENFHPLNRNYGHSSWY QLGFRIYNLE GQ+KRWTRKS+TTKAGRKAKT+PS KPS+IRNEILEESVSTSC VS
Subjt:  MITVPMCFSILRVPKFGVHTLSNLWRENFHPLNRNYGHSSWYGQLGFRIYNLEDGQNKRWTRKSVTTKAGRKAKTHPSRKPSDIRNEILEESVSTSCIVS

Query:  INKTEKSETQKLQYCDIQQTIIENKDLACRVTVIIFDIETTGFSRNKDRIVEIAFRDLSGGENSTFQTLINPECYIPNSDLHGITNRMVSRPEVPRMEEL
        INK+EK  TQKLQ C+IQ+TII++K+LA  VTVI FDIETTGFSR  DRIVEIA +DLSGGENSTFQTLINPECYIPN+ +HGIT+RMVSRP+VPRM+EL
Subjt:  INKTEKSETQKLQYCDIQQTIIENKDLACRVTVIIFDIETTGFSRNKDRIVEIAFRDLSGGENSTFQTLINPECYIPNSDLHGITNRMVSRPEVPRMEEL

Query:  IPILLQFVKSRQKPDGYVLLVAHNARAFDVPFLLKEFSRCSVDIPENWLFFDNMILARQLMKSSDSKITRMSLQALREYYDIPLVGSAHRAMSDVMSLSR
        IPILLQFVKSRQKPDGYVLLVAHNAR FDVPFLLKEFSRCSVDIP NWLFFDN++LARQLMKS+DSKIT++SLQALREYY+IPLVGSAHRAMSDV +LS 
Subjt:  IPILLQFVKSRQKPDGYVLLVAHNARAFDVPFLLKEFSRCSVDIPENWLFFDNMILARQLMKSSDSKITRMSLQALREYYDIPLVGSAHRAMSDVMSLSR

Query:  ILQRLTFDLKLGISDLIERSFTASDLINKKK
        ILQRLTFDLKLGI DLIERSFT SDLINKKK
Subjt:  ILQRLTFDLKLGISDLIERSFTASDLINKKK

SwissProt top hitse value%identityAlignment
Q682U6 Exonuclease DPD1, chloroplastic/mitochondrial1.5e-6645.82Show/hide
Query:  MCFSILRVPKFGVHTLSNLWRENFHPLNRNYGHSSWYGQLGFRIYNLEDGQNKRWTRKSVTTKAGRKAKTHPSRKPSDIRNEILEESVSTSCIVSINKTE
        MC SI +V +  +H+  +   E  H   +N   SS    L  R  ++ DG+  RW R++V+T       T  SR  S+ ++ +L  +V  + I+     E
Subjt:  MCFSILRVPKFGVHTLSNLWRENFHPLNRNYGHSSWYGQLGFRIYNLEDGQNKRWTRKSVTTKAGRKAKTHPSRKPSDIRNEILEESVSTSCIVSINKTE

Query:  KSETQKLQYCDIQQTIIENKDLACRVTVIIFDIETTGFSRNKDRIVEIAFRDLSGGENSTFQTLINPECY-IPNSDLHGITNRMVSRPEVPRMEELIPIL
        +S T+   + ++QQ + ++KDL+  +TVI+ D+ETTG  R  +RI+EIA +D++GG  STFQTL+NP    I N+ +HGI N MV RPEVPRMEELIPI 
Subjt:  KSETQKLQYCDIQQTIIENKDLACRVTVIIFDIETTGFSRNKDRIVEIAFRDLSGGENSTFQTLINPECY-IPNSDLHGITNRMVSRPEVPRMEELIPIL

Query:  LQFVKSRQKPDGYVLLVAHNARAFDVPFLLKEFSRCSVDIPENWLFFDNMILARQLMKSSDSKI-TRMSLQALREYYDIPLVGSAHRAMSDVMSLSRILQ
        L++V+SRQKP GYV+LVAHN ++FD  FL+ EF+RCS +IP NWL  D++ LAR+ MKS +  +    SL+AL +YY +   G AHRA+SDV+ LS++ Q
Subjt:  LQFVKSRQKPDGYVLLVAHNARAFDVPFLLKEFSRCSVDIPENWLFFDNMILARQLMKSSDSKI-TRMSLQALREYYDIPLVGSAHRAMSDVMSLSRILQ

Query:  RLTFDLKLGISDLIERSFTASDL
        +LT DLKL +SDL+ R  TASD+
Subjt:  RLTFDLKLGISDLIERSFTASDL

Q895K2 DNA polymerase III PolC-type4.0e-1432.84Show/hide
Query:  IIFDIETTGFSRNKDRIVEI-AFRDLSGGENSTFQTLINPECYIPNS--DLHGITNRMVSRPEVPRMEELIPILLQFVKSRQKPDGYVLLVAHNARAFDV
        ++FDIETTGFS   D+I+EI A +   G     + T +NPE  IP    +L GI + MV   + P++EE++P  + F++         +LVAHNA  FDV
Subjt:  IIFDIETTGFSRNKDRIVEI-AFRDLSGGENSTFQTLINPECYIPNS--DLHGITNRMVSRPEVPRMEELIPILLQFVKSRQKPDGYVLLVAHNARAFDV

Query:  PFLLKEFSRCSVDIPENWLFFDNMIL-ARQLMKSSDSKITRMSLQALREYYDIPLVGSAHRAMSDVMSLSRILQRLTFDLK----LGISDLIERSFTASD
         F+ K       +  +  + F+N IL    L K    ++ R  L  + ++  IPL+ + HRA+ D  +   IL +   DLK    + ++ L E  F   D
Subjt:  PFLLKEFSRCSVDIPENWLFFDNMIL-ARQLMKSSDSKITRMSLQALREYYDIPLVGSAHRAMSDVMSLSRILQRLTFDLK----LGISDLIERSFTASD

Query:  L
        +
Subjt:  L

Q8EQU6 DNA polymerase III PolC-type3.0e-0932.2Show/hide
Query:  TVIIFDIETTGFSRNKDRIVEIAFRDLSGGE-NSTFQTLINPECYIPNS--DLHGITNRMVSRPEVPRMEELIPILLQFVKSRQKPDGYVLLVAHNARAF
        T ++FD+ETTG S   D I+E+A   + GGE    F++  NP   +  +  DL GIT+ MV+  + P + +++       K      G  +LVAHNA +F
Subjt:  TVIIFDIETTGFSRNKDRIVEIAFRDLSGGE-NSTFQTLINPECYIPNS--DLHGITNRMVSRPEVPRMEELIPILLQFVKSRQKPDGYVLLVAHNARAF

Query:  DVPFLLKEFSRCSVDIPENWLFFDNMILARQLMKSSDSKITRMSLQALREYYDIPLVGSAHRAMSDVMSLSRILQRL
        D+ FL + F R   +   N +  D + LAR L+     ++    L  L ++ DI L    HRA+ D  +   +L +L
Subjt:  DVPFLLKEFSRCSVDIPENWLFFDNMILARQLMKSSDSKITRMSLQALREYYDIPLVGSAHRAMSDVMSLSRILQRL

Q8RA32 DNA polymerase III PolC-type6.4e-1230.69Show/hide
Query:  IIFDIETTGFSRNKDRIVEIAFRDLSGGE-NSTFQTLINPECYIPN--SDLHGITNRMVSRPEVPRMEELIPILLQFVKSRQKPDGYVLLVAHNARAFDV
        ++FDIETTG S   D I+EI    +   +   TF+T +NP+  I +  + L GI   MV   + P +EE++P  L+F K         +LVAHNA  FDV
Subjt:  IIFDIETTGFSRNKDRIVEIAFRDLSGGE-NSTFQTLINPECYIPN--SDLHGITNRMVSRPEVPRMEELIPILLQFVKSRQKPDGYVLLVAHNARAFDV

Query:  PFLLKEFSRCSVDIPENWLFFDNMILARQLMKSSDSKITRMSLQALREYYDIPLVGSAHRAMSDVMSLSRILQRLTFDL-KLGISDLIE
         F+  +  +  + +    L  D + L+R L +     +    L  L E++++ L+   HRA+ D  + + I  ++   L ++GI  + E
Subjt:  PFLLKEFSRCSVDIPENWLFFDNMILARQLMKSSDSKITRMSLQALREYYDIPLVGSAHRAMSDVMSLSRILQRLTFDL-KLGISDLIE

Q8XJR3 DNA polymerase III PolC-type8.3e-1233.53Show/hide
Query:  IIFDIETTGFSRNKDRIVEIAFRDLSGGE-NSTFQTLINPECYIPN--SDLHGITNRMVSRPEVPRMEELIPILLQFVKSRQKPDGYVLLVAHNARAFDV
        ++FDIETTGFS   D+I+EI    L  GE   +F T ++P+  IP   ++L  IT  MV+    P ++E++P  ++FV       G  +LVAHNA AFDV
Subjt:  IIFDIETTGFSRNKDRIVEIAFRDLSGGE-NSTFQTLINPECYIPN--SDLHGITNRMVSRPEVPRMEELIPILLQFVKSRQKPDGYVLLVAHNARAFDV

Query:  PFLLKEFSRCSVDIPENWLFFDNMILARQLMKSSDSKITRMSLQALREYYDIPLVGSAHRAMSDVMSLSRILQ
         F+ K        +       D + LAR L       + ++ L  + ++  I L  + HRA+ D  + + IL+
Subjt:  PFLLKEFSRCSVDIPENWLFFDNMILARQLMKSSDSKITRMSLQALREYYDIPLVGSAHRAMSDVMSLSRILQ

Arabidopsis top hitse value%identityAlignment
AT5G26940.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein1.1e-6745.82Show/hide
Query:  MCFSILRVPKFGVHTLSNLWRENFHPLNRNYGHSSWYGQLGFRIYNLEDGQNKRWTRKSVTTKAGRKAKTHPSRKPSDIRNEILEESVSTSCIVSINKTE
        MC SI +V +  +H+  +   E  H   +N   SS    L  R  ++ DG+  RW R++V+T       T  SR  S+ ++ +L  +V  + I+     E
Subjt:  MCFSILRVPKFGVHTLSNLWRENFHPLNRNYGHSSWYGQLGFRIYNLEDGQNKRWTRKSVTTKAGRKAKTHPSRKPSDIRNEILEESVSTSCIVSINKTE

Query:  KSETQKLQYCDIQQTIIENKDLACRVTVIIFDIETTGFSRNKDRIVEIAFRDLSGGENSTFQTLINPECY-IPNSDLHGITNRMVSRPEVPRMEELIPIL
        +S T+   + ++QQ + ++KDL+  +TVI+ D+ETTG  R  +RI+EIA +D++GG  STFQTL+NP    I N+ +HGI N MV RPEVPRMEELIPI 
Subjt:  KSETQKLQYCDIQQTIIENKDLACRVTVIIFDIETTGFSRNKDRIVEIAFRDLSGGENSTFQTLINPECY-IPNSDLHGITNRMVSRPEVPRMEELIPIL

Query:  LQFVKSRQKPDGYVLLVAHNARAFDVPFLLKEFSRCSVDIPENWLFFDNMILARQLMKSSDSKI-TRMSLQALREYYDIPLVGSAHRAMSDVMSLSRILQ
        L++V+SRQKP GYV+LVAHN ++FD  FL+ EF+RCS +IP NWL  D++ LAR+ MKS +  +    SL+AL +YY +   G AHRA+SDV+ LS++ Q
Subjt:  LQFVKSRQKPDGYVLLVAHNARAFDVPFLLKEFSRCSVDIPENWLFFDNMILARQLMKSSDSKI-TRMSLQALREYYDIPLVGSAHRAMSDVMSLSRILQ

Query:  RLTFDLKLGISDLIERSFTASDL
        +LT DLKL +SDL+ R  TASD+
Subjt:  RLTFDLKLGISDLIERSFTASDL

AT5G26940.2 Polynucleotidyl transferase, ribonuclease H-like superfamily protein1.1e-6745.82Show/hide
Query:  MCFSILRVPKFGVHTLSNLWRENFHPLNRNYGHSSWYGQLGFRIYNLEDGQNKRWTRKSVTTKAGRKAKTHPSRKPSDIRNEILEESVSTSCIVSINKTE
        MC SI +V +  +H+  +   E  H   +N   SS    L  R  ++ DG+  RW R++V+T       T  SR  S+ ++ +L  +V  + I+     E
Subjt:  MCFSILRVPKFGVHTLSNLWRENFHPLNRNYGHSSWYGQLGFRIYNLEDGQNKRWTRKSVTTKAGRKAKTHPSRKPSDIRNEILEESVSTSCIVSINKTE

Query:  KSETQKLQYCDIQQTIIENKDLACRVTVIIFDIETTGFSRNKDRIVEIAFRDLSGGENSTFQTLINPECY-IPNSDLHGITNRMVSRPEVPRMEELIPIL
        +S T+   + ++QQ + ++KDL+  +TVI+ D+ETTG  R  +RI+EIA +D++GG  STFQTL+NP    I N+ +HGI N MV RPEVPRMEELIPI 
Subjt:  KSETQKLQYCDIQQTIIENKDLACRVTVIIFDIETTGFSRNKDRIVEIAFRDLSGGENSTFQTLINPECY-IPNSDLHGITNRMVSRPEVPRMEELIPIL

Query:  LQFVKSRQKPDGYVLLVAHNARAFDVPFLLKEFSRCSVDIPENWLFFDNMILARQLMKSSDSKI-TRMSLQALREYYDIPLVGSAHRAMSDVMSLSRILQ
        L++V+SRQKP GYV+LVAHN ++FD  FL+ EF+RCS +IP NWL  D++ LAR+ MKS +  +    SL+AL +YY +   G AHRA+SDV+ LS++ Q
Subjt:  LQFVKSRQKPDGYVLLVAHNARAFDVPFLLKEFSRCSVDIPENWLFFDNMILARQLMKSSDSKI-TRMSLQALREYYDIPLVGSAHRAMSDVMSLSRILQ

Query:  RLTFDLKLGISDLIERSFTASDL
        +LT DLKL +SDL+ R  TASD+
Subjt:  RLTFDLKLGISDLIERSFTASDL

AT5G26940.3 Polynucleotidyl transferase, ribonuclease H-like superfamily protein1.1e-6745.82Show/hide
Query:  MCFSILRVPKFGVHTLSNLWRENFHPLNRNYGHSSWYGQLGFRIYNLEDGQNKRWTRKSVTTKAGRKAKTHPSRKPSDIRNEILEESVSTSCIVSINKTE
        MC SI +V +  +H+  +   E  H   +N   SS    L  R  ++ DG+  RW R++V+T       T  SR  S+ ++ +L  +V  + I+     E
Subjt:  MCFSILRVPKFGVHTLSNLWRENFHPLNRNYGHSSWYGQLGFRIYNLEDGQNKRWTRKSVTTKAGRKAKTHPSRKPSDIRNEILEESVSTSCIVSINKTE

Query:  KSETQKLQYCDIQQTIIENKDLACRVTVIIFDIETTGFSRNKDRIVEIAFRDLSGGENSTFQTLINPECY-IPNSDLHGITNRMVSRPEVPRMEELIPIL
        +S T+   + ++QQ + ++KDL+  +TVI+ D+ETTG  R  +RI+EIA +D++GG  STFQTL+NP    I N+ +HGI N MV RPEVPRMEELIPI 
Subjt:  KSETQKLQYCDIQQTIIENKDLACRVTVIIFDIETTGFSRNKDRIVEIAFRDLSGGENSTFQTLINPECY-IPNSDLHGITNRMVSRPEVPRMEELIPIL

Query:  LQFVKSRQKPDGYVLLVAHNARAFDVPFLLKEFSRCSVDIPENWLFFDNMILARQLMKSSDSKI-TRMSLQALREYYDIPLVGSAHRAMSDVMSLSRILQ
        L++V+SRQKP GYV+LVAHN ++FD  FL+ EF+RCS +IP NWL  D++ LAR+ MKS +  +    SL+AL +YY +   G AHRA+SDV+ LS++ Q
Subjt:  LQFVKSRQKPDGYVLLVAHNARAFDVPFLLKEFSRCSVDIPENWLFFDNMILARQLMKSSDSKI-TRMSLQALREYYDIPLVGSAHRAMSDVMSLSRILQ

Query:  RLTFDLKLGISDLIERSFTASDL
        +LT DLKL +SDL+ R  TASD+
Subjt:  RLTFDLKLGISDLIERSFTASDL

AT5G26940.4 Polynucleotidyl transferase, ribonuclease H-like superfamily protein1.1e-6745.82Show/hide
Query:  MCFSILRVPKFGVHTLSNLWRENFHPLNRNYGHSSWYGQLGFRIYNLEDGQNKRWTRKSVTTKAGRKAKTHPSRKPSDIRNEILEESVSTSCIVSINKTE
        MC SI +V +  +H+  +   E  H   +N   SS    L  R  ++ DG+  RW R++V+T       T  SR  S+ ++ +L  +V  + I+     E
Subjt:  MCFSILRVPKFGVHTLSNLWRENFHPLNRNYGHSSWYGQLGFRIYNLEDGQNKRWTRKSVTTKAGRKAKTHPSRKPSDIRNEILEESVSTSCIVSINKTE

Query:  KSETQKLQYCDIQQTIIENKDLACRVTVIIFDIETTGFSRNKDRIVEIAFRDLSGGENSTFQTLINPECY-IPNSDLHGITNRMVSRPEVPRMEELIPIL
        +S T+   + ++QQ + ++KDL+  +TVI+ D+ETTG  R  +RI+EIA +D++GG  STFQTL+NP    I N+ +HGI N MV RPEVPRMEELIPI 
Subjt:  KSETQKLQYCDIQQTIIENKDLACRVTVIIFDIETTGFSRNKDRIVEIAFRDLSGGENSTFQTLINPECY-IPNSDLHGITNRMVSRPEVPRMEELIPIL

Query:  LQFVKSRQKPDGYVLLVAHNARAFDVPFLLKEFSRCSVDIPENWLFFDNMILARQLMKSSDSKI-TRMSLQALREYYDIPLVGSAHRAMSDVMSLSRILQ
        L++V+SRQKP GYV+LVAHN ++FD  FL+ EF+RCS +IP NWL  D++ LAR+ MKS +  +    SL+AL +YY +   G AHRA+SDV+ LS++ Q
Subjt:  LQFVKSRQKPDGYVLLVAHNARAFDVPFLLKEFSRCSVDIPENWLFFDNMILARQLMKSSDSKI-TRMSLQALREYYDIPLVGSAHRAMSDVMSLSRILQ

Query:  RLTFDLKLGISDLIERSFTASDL
        +LT DLKL +SDL+ R  TASD+
Subjt:  RLTFDLKLGISDLIERSFTASDL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATAACAGTTCCGATGTGCTTTTCGATCTTGCGAGTTCCGAAGTTTGGAGTCCACACTTTATCTAATTTATGGAGGGAAAACTTCCATCCCTTGAACAGGAATTATGG
TCATAGTTCTTGGTATGGTCAGCTTGGTTTTAGAATCTATAACCTTGAAGATGGGCAGAACAAGAGATGGACCAGAAAATCTGTGACCACAAAAGCAGGGAGGAAAGCCA
AAACCCACCCCAGCCGTAAACCAAGCGATATCAGAAATGAAATCTTAGAGGAATCGGTCTCGACAAGCTGTATAGTTAGCATTAACAAGACTGAGAAAAGTGAAACTCAG
AAGCTTCAATACTGTGATATTCAACAAACGATTATTGAGAACAAGGACTTGGCTTGCCGCGTGACAGTTATAATCTTTGACATTGAAACGACAGGTTTTAGTAGAAACAA
AGATAGAATAGTGGAAATAGCATTTCGAGATCTTTCAGGAGGAGAAAATAGCACCTTCCAAACACTAATAAATCCAGAGTGCTATATTCCAAATTCAGATCTACATGGCA
TTACAAACCGTATGGTCAGTCGACCCGAAGTTCCGAGGATGGAGGAACTTATTCCAATTTTATTACAATTTGTTAAAAGCCGTCAGAAACCTGATGGTTATGTATTATTG
GTAGCTCATAATGCTCGTGCCTTCGACGTGCCGTTTTTGCTCAAGGAATTCAGCCGTTGCTCCGTCGACATTCCTGAAAATTGGCTATTTTTCGATAACATGATTTTAGC
CCGTCAGTTGATGAAATCCTCAGATTCGAAGATTACGAGAATGTCATTACAAGCTCTTCGCGAGTATTACGATATTCCGCTGGTGGGTTCAGCTCACCGAGCAATGTCGG
ACGTGATGTCGTTGTCGCGGATTCTTCAAAGGCTTACTTTTGACCTCAAGCTAGGCATCTCGGATCTCATCGAAAGATCTTTCACAGCTTCAGATCTGATTAATAAGAAG
AAGAACTAG
mRNA sequenceShow/hide mRNA sequence
ATGATAACAGTTCCGATGTGCTTTTCGATCTTGCGAGTTCCGAAGTTTGGAGTCCACACTTTATCTAATTTATGGAGGGAAAACTTCCATCCCTTGAACAGGAATTATGG
TCATAGTTCTTGGTATGGTCAGCTTGGTTTTAGAATCTATAACCTTGAAGATGGGCAGAACAAGAGATGGACCAGAAAATCTGTGACCACAAAAGCAGGGAGGAAAGCCA
AAACCCACCCCAGCCGTAAACCAAGCGATATCAGAAATGAAATCTTAGAGGAATCGGTCTCGACAAGCTGTATAGTTAGCATTAACAAGACTGAGAAAAGTGAAACTCAG
AAGCTTCAATACTGTGATATTCAACAAACGATTATTGAGAACAAGGACTTGGCTTGCCGCGTGACAGTTATAATCTTTGACATTGAAACGACAGGTTTTAGTAGAAACAA
AGATAGAATAGTGGAAATAGCATTTCGAGATCTTTCAGGAGGAGAAAATAGCACCTTCCAAACACTAATAAATCCAGAGTGCTATATTCCAAATTCAGATCTACATGGCA
TTACAAACCGTATGGTCAGTCGACCCGAAGTTCCGAGGATGGAGGAACTTATTCCAATTTTATTACAATTTGTTAAAAGCCGTCAGAAACCTGATGGTTATGTATTATTG
GTAGCTCATAATGCTCGTGCCTTCGACGTGCCGTTTTTGCTCAAGGAATTCAGCCGTTGCTCCGTCGACATTCCTGAAAATTGGCTATTTTTCGATAACATGATTTTAGC
CCGTCAGTTGATGAAATCCTCAGATTCGAAGATTACGAGAATGTCATTACAAGCTCTTCGCGAGTATTACGATATTCCGCTGGTGGGTTCAGCTCACCGAGCAATGTCGG
ACGTGATGTCGTTGTCGCGGATTCTTCAAAGGCTTACTTTTGACCTCAAGCTAGGCATCTCGGATCTCATCGAAAGATCTTTCACAGCTTCAGATCTGATTAATAAGAAG
AAGAACTAG
Protein sequenceShow/hide protein sequence
MITVPMCFSILRVPKFGVHTLSNLWRENFHPLNRNYGHSSWYGQLGFRIYNLEDGQNKRWTRKSVTTKAGRKAKTHPSRKPSDIRNEILEESVSTSCIVSINKTEKSETQ
KLQYCDIQQTIIENKDLACRVTVIIFDIETTGFSRNKDRIVEIAFRDLSGGENSTFQTLINPECYIPNSDLHGITNRMVSRPEVPRMEELIPILLQFVKSRQKPDGYVLL
VAHNARAFDVPFLLKEFSRCSVDIPENWLFFDNMILARQLMKSSDSKITRMSLQALREYYDIPLVGSAHRAMSDVMSLSRILQRLTFDLKLGISDLIERSFTASDLINKK
KN