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Spg028118 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg028118
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionReverse transcriptase domain-containing protein
Genome locationscaffold2:43831419..43840126
RNA-Seq ExpressionSpg028118
SyntenySpg028118
Gene Ontology termsGO:0006807 - nitrogen compound metabolic process (biological process)
GO:0044238 - primary metabolic process (biological process)
GO:0044260 - cellular macromolecule metabolic process (biological process)
GO:0110165 - cellular anatomical structure (cellular component)
GO:0016868 - intramolecular transferase activity, phosphotransferases (molecular function)
InterPro domainsIPR005843 - Alpha-D-phosphohexomutase, C-terminal
IPR036691 - Endonuclease/exonuclease/phosphatase superfamily
IPR036900 - Alpha-D-phosphohexomutase, C-terminal domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0032235.1 peptidyl-prolyl cis-trans isomerase CYP23 isoform X1 [Cucumis melo var. makuwa]9.5e-2357.61Show/hide
Query:  WEELGGLFGLCGPCWCMAGDFNVIRSPLEKASGGRETKSMRRFNDFIEGSQLVDPPLVNGRFTWANNRARSRIDRFLFSRGWMEAFGFVRQE
        WEELG L+  CG  WC+ GDFNV+ SP EKA GG+ T+S+R FN+FI+ S L DPPL+ G+FT AN RA +RIDR L S+ W+E FG + +E
Subjt:  WEELGGLFGLCGPCWCMAGDFNVIRSPLEKASGGRETKSMRRFNDFIEGSQLVDPPLVNGRFTWANNRARSRIDRFLFSRGWMEAFGFVRQE

TYK22164.1 peptidyl-prolyl cis-trans isomerase CYP23 isoform X1 [Cucumis melo var. makuwa]9.5e-2357.61Show/hide
Query:  WEELGGLFGLCGPCWCMAGDFNVIRSPLEKASGGRETKSMRRFNDFIEGSQLVDPPLVNGRFTWANNRARSRIDRFLFSRGWMEAFGFVRQE
        WEELG L+  CG  WC+ GDFNV+ SP EKA GG+ T+S+R FN+FI+ S L DPPL+ G+FT AN RA +RIDR L S+ W+E FG + +E
Subjt:  WEELGGLFGLCGPCWCMAGDFNVIRSPLEKASGGRETKSMRRFNDFIEGSQLVDPPLVNGRFTWANNRARSRIDRFLFSRGWMEAFGFVRQE

VVA21938.1 Hypothetical predicted protein, partial [Prunus dulcis]9.5e-2349.57Show/hide
Query:  WEELGGLFGLCGPCWCMAGDFNVIRSPLEKASGGRETKSMRRFNDFIEGSQLVDPPLVNGRFTWANNRARS---RIDRFLFSRGWMEAFGFVRQE--AEE
        WEEL GLFGLCG  WC+ GDFNV+R   EK++GGR T SM+ FNDFI+ + L DP L+N  FTW+N R  +   R+DRFLFS  W ++F  V+    A  
Subjt:  WEELGGLFGLCGPCWCMAGDFNVIRSPLEKASGGRETKSMRRFNDFIEGSQLVDPPLVNGRFTWANNRARS---RIDRFLFSRGWMEAFGFVRQE--AEE

Query:  DLDHILWNCEFACLIWG
          DH     + + L WG
Subjt:  DLDHILWNCEFACLIWG

VVA41200.1 PREDICTED: RNA-directed DNA polymerase, partial [Prunus dulcis]5.6e-2349.57Show/hide
Query:  WEELGGLFGLCGPCWCMAGDFNVIRSPLEKASGGRETKSMRRFNDFIEGSQLVDPPLVNGRFTWANNRARS---RIDRFLFSRGWMEAFGFVRQE--AEE
        WEEL GLFGLCG  WC+ GDFNV+R   EK++GGR T SM+ FNDFI+ + L DP L+N  FTW+N R  +   R+DRFLFS  W ++F  V+    A  
Subjt:  WEELGGLFGLCGPCWCMAGDFNVIRSPLEKASGGRETKSMRRFNDFIEGSQLVDPPLVNGRFTWANNRARS---RIDRFLFSRGWMEAFGFVRQE--AEE

Query:  DLDHILWNCEFACLIWG
          DH     + + L WG
Subjt:  DLDHILWNCEFACLIWG

XP_028075126.1 uncharacterized protein LOC114277426 [Camellia sinensis]3.6e-2245.71Show/hide
Query:  WEELGGLFGLCGPCWCMAGDFNVIRSPLEKASGGRETKSMRRFNDFIEGSQLVDPPLVNGRFTWAN---NRARSRIDRFLFSRGWMEAFGFVRQEAEEDL
        W+ELGGLFGLC P WC+  DFNV+R   EK +G    +SMR F+ FI   +L+DPPL N RFTW+N   NR   R+DRFL + GW E F  +R+E    +
Subjt:  WEELGGLFGLCGPCWCMAGDFNVIRSPLEKASGGRETKSMRRFNDFIEGSQLVDPPLVNGRFTWAN---NRARSRIDRFLFSRGWMEAFGFVRQEAEEDL

Query:  --DH---ILWNCEFACLIWG----LFHNAFGLQARHFRDY
          DH   IL +C F    WG     F N + L+ R F+++
Subjt:  --DH---ILWNCEFACLIWG----LFHNAFGLQARHFRDY

TrEMBL top hitse value%identityAlignment
A0A5A7SSQ8 Peptidyl-prolyl cis-trans isomerase CYP23 isoform X14.6e-2357.61Show/hide
Query:  WEELGGLFGLCGPCWCMAGDFNVIRSPLEKASGGRETKSMRRFNDFIEGSQLVDPPLVNGRFTWANNRARSRIDRFLFSRGWMEAFGFVRQE
        WEELG L+  CG  WC+ GDFNV+ SP EKA GG+ T+S+R FN+FI+ S L DPPL+ G+FT AN RA +RIDR L S+ W+E FG + +E
Subjt:  WEELGGLFGLCGPCWCMAGDFNVIRSPLEKASGGRETKSMRRFNDFIEGSQLVDPPLVNGRFTWANNRARSRIDRFLFSRGWMEAFGFVRQE

A0A5D3DEZ6 Peptidyl-prolyl cis-trans isomerase CYP23 isoform X14.6e-2357.61Show/hide
Query:  WEELGGLFGLCGPCWCMAGDFNVIRSPLEKASGGRETKSMRRFNDFIEGSQLVDPPLVNGRFTWANNRARSRIDRFLFSRGWMEAFGFVRQE
        WEELG L+  CG  WC+ GDFNV+ SP EKA GG+ T+S+R FN+FI+ S L DPPL+ G+FT AN RA +RIDR L S+ W+E FG + +E
Subjt:  WEELGGLFGLCGPCWCMAGDFNVIRSPLEKASGGRETKSMRRFNDFIEGSQLVDPPLVNGRFTWANNRARSRIDRFLFSRGWMEAFGFVRQE

A0A5E4F859 Reverse transcriptase domain-containing protein (Fragment)4.6e-2349.57Show/hide
Query:  WEELGGLFGLCGPCWCMAGDFNVIRSPLEKASGGRETKSMRRFNDFIEGSQLVDPPLVNGRFTWANNRARS---RIDRFLFSRGWMEAFGFVRQE--AEE
        WEEL GLFGLCG  WC+ GDFNV+R   EK++GGR T SM+ FNDFI+ + L DP L+N  FTW+N R  +   R+DRFLFS  W ++F  V+    A  
Subjt:  WEELGGLFGLCGPCWCMAGDFNVIRSPLEKASGGRETKSMRRFNDFIEGSQLVDPPLVNGRFTWANNRARS---RIDRFLFSRGWMEAFGFVRQE--AEE

Query:  DLDHILWNCEFACLIWG
          DH     + + L WG
Subjt:  DLDHILWNCEFACLIWG

A0A5E4GN72 PREDICTED: RNA-directed DNA polymerase (Fragment)2.7e-2349.57Show/hide
Query:  WEELGGLFGLCGPCWCMAGDFNVIRSPLEKASGGRETKSMRRFNDFIEGSQLVDPPLVNGRFTWANNRARS---RIDRFLFSRGWMEAFGFVRQE--AEE
        WEEL GLFGLCG  WC+ GDFNV+R   EK++GGR T SM+ FNDFI+ + L DP L+N  FTW+N R  +   R+DRFLFS  W ++F  V+    A  
Subjt:  WEELGGLFGLCGPCWCMAGDFNVIRSPLEKASGGRETKSMRRFNDFIEGSQLVDPPLVNGRFTWANNRARS---RIDRFLFSRGWMEAFGFVRQE--AEE

Query:  DLDHILWNCEFACLIWG
          DH     + + L WG
Subjt:  DLDHILWNCEFACLIWG

M5XUF8 Reverse transcriptase domain-containing protein (Fragment)2.7e-2345.19Show/hide
Query:  IGGFQGFMALLDREVGGLWEELGGLFGLCGPCWCMAGDFNVIRSPLEKASGGRETKSMRRFNDFIEGSQLVDPPLVNGRFTWANNRARS---RIDRFLFS
        + G  G     DR     WEEL GLFGLCG  WC+ GDFNV+R   EK++GGR T SM+ FNDFI+ + L DP L+N  FTW+N R  +   R+DRFLF 
Subjt:  IGGFQGFMALLDREVGGLWEELGGLFGLCGPCWCMAGDFNVIRSPLEKASGGRETKSMRRFNDFIEGSQLVDPPLVNGRFTWANNRARS---RIDRFLFS

Query:  RGWMEAFGFVRQE--AEEDLDHILWNCEFACLIWG
          W ++F  V+    A    DH     + + L WG
Subjt:  RGWMEAFGFVRQE--AEEDLDHILWNCEFACLIWG

SwissProt top hitse value%identityAlignment
O95394 Phosphoacetylglucosamine mutase2.6e-0760.87Show/hide
Query:  KYPQGRSFIRPSGTEDVIRVYAEASTQEAADSLASSVAKIVDQFLG
        KY   R+F+RPSGTEDV+RVYAEA +QE+AD LA  V+  V Q  G
Subjt:  KYPQGRSFIRPSGTEDVIRVYAEASTQEAADSLASSVAKIVDQFLG

P57750 Phosphoacetylglucosamine mutase2.7e-1278.26Show/hide
Query:  KYPQGRSFIRPSGTEDVIRVYAEASTQEAADSLASSVAKIVDQFLG
        KY +GR+FIRPSGTEDV+RVYAEASTQE ADSLA+SVA++V  FLG
Subjt:  KYPQGRSFIRPSGTEDVIRVYAEASTQEAADSLASSVAKIVDQFLG

P57750 Phosphoacetylglucosamine mutase8.7e-0364.71Show/hide
Query:  IIVKVFDRTTVETTNAETEVVKPPGIQEAINSEI
        I V+V DRT V TT+ ETE ++P GIQ+AINSEI
Subjt:  IIVKVFDRTTVETTNAETEVVKPPGIQEAINSEI

Q09687 Phosphoacetylglucosamine mutase 13.1e-0865.91Show/hide
Query:  LWAKYPQGRSFIRPSGTEDVIRVYAEASTQEAADSLASSVAKIV
        L AKY +GRSF+R SGTEDV+RVYAEAST++AAD L   V ++V
Subjt:  LWAKYPQGRSFIRPSGTEDVIRVYAEASTQEAADSLASSVAKIV

Q6ZDQ1 Phosphoacetylglucosamine mutase1.2e-0955.17Show/hide
Query:  SGVCAVLWGLWAKYPQGRSFIRPSGTEDVIRVYAEASTQEAADSLASSVAKIVDQFLG
        +G+  ++ G  + Y  GR F+RPSGTEDV+RVYAEAS++EAAD LA  VA+ V++ LG
Subjt:  SGVCAVLWGLWAKYPQGRSFIRPSGTEDVIRVYAEASTQEAADSLASSVAKIVDQFLG

Q9CYR6 Phosphoacetylglucosamine mutase1.5e-0758.7Show/hide
Query:  KYPQGRSFIRPSGTEDVIRVYAEASTQEAADSLASSVAKIVDQFLG
        KY   R+F+RPSGTED++RVYAEA++QE+AD LA  V+ +V Q  G
Subjt:  KYPQGRSFIRPSGTEDVIRVYAEASTQEAADSLASSVAKIVDQFLG

Arabidopsis top hitse value%identityAlignment
AT5G18070.1 phosphoglucosamine mutase-related1.9e-1378.26Show/hide
Query:  KYPQGRSFIRPSGTEDVIRVYAEASTQEAADSLASSVAKIVDQFLG
        KY +GR+FIRPSGTEDV+RVYAEASTQE ADSLA+SVA++V  FLG
Subjt:  KYPQGRSFIRPSGTEDVIRVYAEASTQEAADSLASSVAKIVDQFLG

AT5G18070.1 phosphoglucosamine mutase-related6.2e-0464.71Show/hide
Query:  IIVKVFDRTTVETTNAETEVVKPPGIQEAINSEI
        I V+V DRT V TT+ ETE ++P GIQ+AINSEI
Subjt:  IIVKVFDRTTVETTNAETEVVKPPGIQEAINSEI


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTCGAGGTCTTCTTCCGCCATACGACAGAGAATGCAACAAAAAGGCCTGATCAAGCAAGGGATCTTTCTGGAGAGTCGATCAAGAGTGCTAACTCTTCCATGGATTA
CCTGGCAAATGAAAAAATGCACCTTTTTTTGGGACTTTCACCTTCCACAACATGGAAAAAATGGACAAATCGTTTGCTCTCATCTGGGGATATTGAAAAAGAGTTTATTG
CTTTTTATCAAGCTCTTTATACCAAGGATGATAGTCCTTGCTTCCTTCCTAGTAATATAGGTTGGTGCCTTATAAAGGCAGAAATGGCTGATGATTTAGAAAAAGAATTC
ACTAAGGAAGTTCTTCTTGCCCCTGGGCGCCTCGCCTCTCGCCATAAGCGAGCGCCTGGGGTCGCCTCAATAACACTGCCTGAGAAAGGATCTCTTTGGTACAACATTAT
TGTGAAAGTCTTTGACAGAACAACAGTCGAAACAACCAACGCAGAAACTGAGGTTGTGAAGCCACCTGGGATACAAGAAGCGATCAATTCGGAAATAGGTGGATTTCAGG
GGTTTATGGCCCTCCTAGACCGAGAGGTAGGGGGGCTTTGGGAGGAGTTGGGTGGTCTTTTTGGTTTATGTGGTCCGTGTTGGTGCATGGCCGGTGATTTTAATGTTATT
CGTTCTCCCCTTGAGAAAGCTTCGGGGGGTCGTGAGACGAAATCCATGAGAAGGTTCAATGATTTCATAGAAGGTAGTCAATTAGTGGACCCTCCTCTGGTCAATGGGCG
GTTTACTTGGGCCAACAATAGGGCTAGAAGCAGAATTGATAGATTTTTGTTTTCTAGAGGTTGGATGGAGGCGTTTGGGTTTGTGAGACAAGAGGCGGAGGAAGATCTGG
ACCATATTTTATGGAACTGTGAGTTTGCTTGTTTGATATGGGGTTTGTTTCACAACGCATTTGGGCTACAGGCGAGACACTTCAGAGACTACAGGGAGATGATCCTGAAG
TTCCTCCTTCGTCCACCGTTCCGCGATAAGGGGAGGTTTTTATGGTTATCTGGGGTGTGTGCTGTTTTATGGGGTCTTTGGGCAAAATATCCTCAAGGACGTTCTTTCAT
CAGGCCATCAGGAACCGAGGACGTTATTCGTGTCTATGCAGAGGCATCCACGCAGGAAGCAGCAGATAGTCTAGCTAGCTCGGTAGCGAAAATAGTAGACCAATTCCTTG
GGGTTGGCAGCTCAAAATAA
mRNA sequenceShow/hide mRNA sequence
ATGGTCGAGGTCTTCTTCCGCCATACGACAGAGAATGCAACAAAAAGGCCTGATCAAGCAAGGGATCTTTCTGGAGAGTCGATCAAGAGTGCTAACTCTTCCATGGATTA
CCTGGCAAATGAAAAAATGCACCTTTTTTTGGGACTTTCACCTTCCACAACATGGAAAAAATGGACAAATCGTTTGCTCTCATCTGGGGATATTGAAAAAGAGTTTATTG
CTTTTTATCAAGCTCTTTATACCAAGGATGATAGTCCTTGCTTCCTTCCTAGTAATATAGGTTGGTGCCTTATAAAGGCAGAAATGGCTGATGATTTAGAAAAAGAATTC
ACTAAGGAAGTTCTTCTTGCCCCTGGGCGCCTCGCCTCTCGCCATAAGCGAGCGCCTGGGGTCGCCTCAATAACACTGCCTGAGAAAGGATCTCTTTGGTACAACATTAT
TGTGAAAGTCTTTGACAGAACAACAGTCGAAACAACCAACGCAGAAACTGAGGTTGTGAAGCCACCTGGGATACAAGAAGCGATCAATTCGGAAATAGGTGGATTTCAGG
GGTTTATGGCCCTCCTAGACCGAGAGGTAGGGGGGCTTTGGGAGGAGTTGGGTGGTCTTTTTGGTTTATGTGGTCCGTGTTGGTGCATGGCCGGTGATTTTAATGTTATT
CGTTCTCCCCTTGAGAAAGCTTCGGGGGGTCGTGAGACGAAATCCATGAGAAGGTTCAATGATTTCATAGAAGGTAGTCAATTAGTGGACCCTCCTCTGGTCAATGGGCG
GTTTACTTGGGCCAACAATAGGGCTAGAAGCAGAATTGATAGATTTTTGTTTTCTAGAGGTTGGATGGAGGCGTTTGGGTTTGTGAGACAAGAGGCGGAGGAAGATCTGG
ACCATATTTTATGGAACTGTGAGTTTGCTTGTTTGATATGGGGTTTGTTTCACAACGCATTTGGGCTACAGGCGAGACACTTCAGAGACTACAGGGAGATGATCCTGAAG
TTCCTCCTTCGTCCACCGTTCCGCGATAAGGGGAGGTTTTTATGGTTATCTGGGGTGTGTGCTGTTTTATGGGGTCTTTGGGCAAAATATCCTCAAGGACGTTCTTTCAT
CAGGCCATCAGGAACCGAGGACGTTATTCGTGTCTATGCAGAGGCATCCACGCAGGAAGCAGCAGATAGTCTAGCTAGCTCGGTAGCGAAAATAGTAGACCAATTCCTTG
GGGTTGGCAGCTCAAAATAA
Protein sequenceShow/hide protein sequence
MVEVFFRHTTENATKRPDQARDLSGESIKSANSSMDYLANEKMHLFLGLSPSTTWKKWTNRLLSSGDIEKEFIAFYQALYTKDDSPCFLPSNIGWCLIKAEMADDLEKEF
TKEVLLAPGRLASRHKRAPGVASITLPEKGSLWYNIIVKVFDRTTVETTNAETEVVKPPGIQEAINSEIGGFQGFMALLDREVGGLWEELGGLFGLCGPCWCMAGDFNVI
RSPLEKASGGRETKSMRRFNDFIEGSQLVDPPLVNGRFTWANNRARSRIDRFLFSRGWMEAFGFVRQEAEEDLDHILWNCEFACLIWGLFHNAFGLQARHFRDYREMILK
FLLRPPFRDKGRFLWLSGVCAVLWGLWAKYPQGRSFIRPSGTEDVIRVYAEASTQEAADSLASSVAKIVDQFLGVGSSK