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Spg028125 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg028125
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionGag-Pol polyprotein
Genome locationscaffold2:42103925..42105461
RNA-Seq ExpressionSpg028125
SyntenySpg028125
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
EXB53755.1 hypothetical protein L484_022412 [Morus notabilis]2.0e-1531.12Show/hide
Query:  PEFVTRVISQYKWQEFCAHPQEAVVPLVREFYVGLRD---------------------------------------------------------------
        P F+TRVI Q+ W++FC HP   +VPLVREFY  L D                                                               
Subjt:  PEFVTRVISQYKWQEFCAHPQEAVVPLVREFYVGLRD---------------------------------------------------------------

Query:  -------------KSIIWLHFIKNRLMPTTHDSTISVERVMLLYNIMNGLVINIGSIIREEILAC--GRKRAGKLFFGSLITQLYQRVKIVPGKDE
                      + IW HF+  R MP+TH  T++ +RV+LLY+I+ G+ +NI  I  +EI AC   RKR G L+F SLITQL+ +  +   KDE
Subjt:  -------------KSIIWLHFIKNRLMPTTHDSTISVERVMLLYNIMNGLVINIGSIIREEILAC--GRKRAGKLFFGSLITQLYQRVKIVPGKDE

PON35554.1 hypothetical protein PanWU01x14_335450, partial [Parasponia andersonii]4.7e-1729.7Show/hide
Query:  EKGF----SNRAGTLPEFVTRVISQYKWQEFCAHPQEAVVPLVREFYVGLRD------------------------------------------------
        EKGF    S   G LP F+ +VI+Q+ W++FCAHP++ +VPLVREFY  L D                                                
Subjt:  EKGF----SNRAGTLPEFVTRVISQYKWQEFCAHPQEAVVPLVREFYVGLRD------------------------------------------------

Query:  ----------------------------KSIIWLHFIKNRLMPTTHDSTISVERVMLLYNIMNGLVINIGSIIREEILACGRKRAGKLFFGSLITQLYQR
                                     + +W HF+K+ L+PTTH  T+S +R++LL++++ G  IN+G +I  EI AC  ++ G LFF SLIT+L + 
Subjt:  ----------------------------KSIIWLHFIKNRLMPTTHDSTISVERVMLLYNIMNGLVINIGSIIREEILACGRKRAGKLFFGSLITQLYQR

Query:  VK
         +
Subjt:  VK

PON41193.1 LOW QUALITY PROTEIN: hypothetical protein PanWU01x14_291710 [Parasponia andersonii]5.4e-1331.11Show/hide
Query:  PEFVTRVISQYKWQEFCAHPQEAVVPLVREFYV--------------------------GLRD-------------------------------------
        P F   VI+Q+ W+ FCA+P++ ++PLV EFY                           GLRD                                     
Subjt:  PEFVTRVISQYKWQEFCAHPQEAVVPLVREFYV--------------------------GLRD-------------------------------------

Query:  -----------KSIIWLHFIKNRLMPTTHDSTISVERVMLLYNIMNGLVINIGSIIREEILACGRKRAGKLFFGSLITQL
                    + IW HF+K+ L+PTTH  T+S +R +LLY+I+ G  IN+G II +EI AC  K+ G LFF SLI +L
Subjt:  -----------KSIIWLHFIKNRLMPTTHDSTISVERVMLLYNIMNGLVINIGSIIREEILACGRKRAGKLFFGSLITQL

PON46472.1 hypothetical protein PanWU01x14_251180, partial [Parasponia andersonii]1.6e-1730.2Show/hide
Query:  EKGF----SNRAGTLPEFVTRVISQYKWQEFCAHPQEAVVPLVREFYVGLRD------------------------------------------------
        EKGF    S   G LP F+ +VI+Q+ W++FCAHP++ +VPLVREFY  L D                                                
Subjt:  EKGF----SNRAGTLPEFVTRVISQYKWQEFCAHPQEAVVPLVREFYVGLRD------------------------------------------------

Query:  ----------------------------KSIIWLHFIKNRLMPTTHDSTISVERVMLLYNIMNGLVINIGSIIREEILACGRKRAGKLFFGSLITQLYQR
                                     + +W HF+K+RL+PTTH  T+S +R++LL++++ G  IN+G +I  EI AC  ++ G LFF SLIT+L + 
Subjt:  ----------------------------KSIIWLHFIKNRLMPTTHDSTISVERVMLLYNIMNGLVINIGSIIREEILACGRKRAGKLFFGSLITQLYQR

Query:  VK
         +
Subjt:  VK

PON70375.1 hypothetical protein PanWU01x14_080440 [Parasponia andersonii]1.2e-1526.42Show/hide
Query:  KLKAKSPKAASPKNPFPEVFKDVNFQERMEIMRKKDFLNEKGFSNRAGTLPEFVTRVISQYKWQEFCAHPQEAVVPLVREFYV-----------------
        ++   + KA   ++   E+  + N Q R  +  +K+F+ +   +++    P F+  VI Q+ WQ FCAHP++ +VPLVREFY                  
Subjt:  KLKAKSPKAASPKNPFPEVFKDVNFQERMEIMRKKDFLNEKGFSNRAGTLPEFVTRVISQYKWQEFCAHPQEAVVPLVREFYV-----------------

Query:  -----------------------------------------------------------GLRDKSIIWLHFIKNRLMPTTHDSTISVERVMLLYNIMNGL
                                                                    L   + +W HF+K+RL+PTTH  T+S E V LLY+++ G 
Subjt:  -----------------------------------------------------------GLRDKSIIWLHFIKNRLMPTTHDSTISVERVMLLYNIMNGL

Query:  VINIGSIIREEILACGRKRAGKLFFGSLITQLYQRVKIVPGKDEER
         IN+G +I  EI AC  +++G LFF SLIT + +  +     +EE+
Subjt:  VINIGSIIREEILACGRKRAGKLFFGSLITQLYQRVKIVPGKDEER

TrEMBL top hitse value%identityAlignment
A0A2P5AGA5 Uncharacterized protein (Fragment)2.3e-1729.7Show/hide
Query:  EKGF----SNRAGTLPEFVTRVISQYKWQEFCAHPQEAVVPLVREFYVGLRD------------------------------------------------
        EKGF    S   G LP F+ +VI+Q+ W++FCAHP++ +VPLVREFY  L D                                                
Subjt:  EKGF----SNRAGTLPEFVTRVISQYKWQEFCAHPQEAVVPLVREFYVGLRD------------------------------------------------

Query:  ----------------------------KSIIWLHFIKNRLMPTTHDSTISVERVMLLYNIMNGLVINIGSIIREEILACGRKRAGKLFFGSLITQLYQR
                                     + +W HF+K+ L+PTTH  T+S +R++LL++++ G  IN+G +I  EI AC  ++ G LFF SLIT+L + 
Subjt:  ----------------------------KSIIWLHFIKNRLMPTTHDSTISVERVMLLYNIMNGLVINIGSIIREEILACGRKRAGKLFFGSLITQLYQR

Query:  VK
         +
Subjt:  VK

A0A2P5AXB5 Uncharacterized protein2.6e-1331.11Show/hide
Query:  PEFVTRVISQYKWQEFCAHPQEAVVPLVREFYV--------------------------GLRD-------------------------------------
        P F   VI+Q+ W+ FCA+P++ ++PLV EFY                           GLRD                                     
Subjt:  PEFVTRVISQYKWQEFCAHPQEAVVPLVREFYV--------------------------GLRD-------------------------------------

Query:  -----------KSIIWLHFIKNRLMPTTHDSTISVERVMLLYNIMNGLVINIGSIIREEILACGRKRAGKLFFGSLITQL
                    + IW HF+K+ L+PTTH  T+S +R +LLY+I+ G  IN+G II +EI AC  K+ G LFF SLI +L
Subjt:  -----------KSIIWLHFIKNRLMPTTHDSTISVERVMLLYNIMNGLVINIGSIIREEILACGRKRAGKLFFGSLITQL

A0A2P5BCG4 Uncharacterized protein (Fragment)7.8e-1830.2Show/hide
Query:  EKGF----SNRAGTLPEFVTRVISQYKWQEFCAHPQEAVVPLVREFYVGLRD------------------------------------------------
        EKGF    S   G LP F+ +VI+Q+ W++FCAHP++ +VPLVREFY  L D                                                
Subjt:  EKGF----SNRAGTLPEFVTRVISQYKWQEFCAHPQEAVVPLVREFYVGLRD------------------------------------------------

Query:  ----------------------------KSIIWLHFIKNRLMPTTHDSTISVERVMLLYNIMNGLVINIGSIIREEILACGRKRAGKLFFGSLITQLYQR
                                     + +W HF+K+RL+PTTH  T+S +R++LL++++ G  IN+G +I  EI AC  ++ G LFF SLIT+L + 
Subjt:  ----------------------------KSIIWLHFIKNRLMPTTHDSTISVERVMLLYNIMNGLVINIGSIIREEILACGRKRAGKLFFGSLITQLYQR

Query:  VK
         +
Subjt:  VK

A0A2P5DAQ2 Uncharacterized protein5.6e-1626.42Show/hide
Query:  KLKAKSPKAASPKNPFPEVFKDVNFQERMEIMRKKDFLNEKGFSNRAGTLPEFVTRVISQYKWQEFCAHPQEAVVPLVREFYV-----------------
        ++   + KA   ++   E+  + N Q R  +  +K+F+ +   +++    P F+  VI Q+ WQ FCAHP++ +VPLVREFY                  
Subjt:  KLKAKSPKAASPKNPFPEVFKDVNFQERMEIMRKKDFLNEKGFSNRAGTLPEFVTRVISQYKWQEFCAHPQEAVVPLVREFYV-----------------

Query:  -----------------------------------------------------------GLRDKSIIWLHFIKNRLMPTTHDSTISVERVMLLYNIMNGL
                                                                    L   + +W HF+K+RL+PTTH  T+S E V LLY+++ G 
Subjt:  -----------------------------------------------------------GLRDKSIIWLHFIKNRLMPTTHDSTISVERVMLLYNIMNGL

Query:  VINIGSIIREEILACGRKRAGKLFFGSLITQLYQRVKIVPGKDEER
         IN+G +I  EI AC  +++G LFF SLIT + +  +     +EE+
Subjt:  VINIGSIIREEILACGRKRAGKLFFGSLITQLYQRVKIVPGKDEER

W9QTD9 Uncharacterized protein9.6e-1631.12Show/hide
Query:  PEFVTRVISQYKWQEFCAHPQEAVVPLVREFYVGLRD---------------------------------------------------------------
        P F+TRVI Q+ W++FC HP   +VPLVREFY  L D                                                               
Subjt:  PEFVTRVISQYKWQEFCAHPQEAVVPLVREFYVGLRD---------------------------------------------------------------

Query:  -------------KSIIWLHFIKNRLMPTTHDSTISVERVMLLYNIMNGLVINIGSIIREEILAC--GRKRAGKLFFGSLITQLYQRVKIVPGKDE
                      + IW HF+  R MP+TH  T++ +RV+LLY+I+ G+ +NI  I  +EI AC   RKR G L+F SLITQL+ +  +   KDE
Subjt:  -------------KSIIWLHFIKNRLMPTTHDSTISVERVMLLYNIMNGLVINIGSIIREEILAC--GRKRAGKLFFGSLITQLYQRVKIVPGKDE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGGGCCAGAATGCGACCGCATTCGGGCCGCATGCTGAAGAAGGTCAAGATGAGGCCACTAATGAATAGCCAGCTGATGAGGTCTTCGAACCTCTATTCAAATATGAT
CCACCAGCTGCTGACAGCACCTGTTCGGGAGAGAAGAGGGATGACGAAGACATTGAGGAAAAAGAGAAGAAGAGAGATCAGGGCAGAAAGGAGGACCAAAAACAAGAATG
ACCCCATATTTGCCAAGAGGCCGAGGACTAGGTCCATGGACGCCTCTCCTGCAGTTCCTCCAACCATCTCACCTACCAAGCTGAAAGCCAAATCCCCTAAGGCTGCATCT
CCTAAAAATCCATTCCCAGAAGTCTTCAAAGATGTAAATTTTCAGGAACGGATGGAGATCATGAGAAAAAAAGATTTCTTGAATGAGAAGGGATTCTCTAACAGAGCAGG
GACACTGCCAGAGTTCGTAACCAGAGTTATCTCACAGTATAAGTGGCAGGAGTTCTGTGCTCACCCTCAGGAGGCCGTGGTGCCTTTAGTTCGAGAATTTTACGTCGGCC
TGAGGGATAAAAGCATAATATGGCTTCACTTTATCAAGAACCGGTTGATGCCAACAACCCATGACAGCACCATCTCAGTAGAGAGAGTTATGCTCCTCTACAATATTATG
AATGGTTTGGTGATCAACATCGGGAGCATTATCAGGGAGGAGATCCTTGCCTGTGGAAGGAAAAGAGCAGGAAAGCTTTTCTTTGGGTCATTGATCACCCAGCTATATCA
GAGGGTGAAGATAGTCCCTGGTAAGGATGAGGAGCGTCATTTCTTCAGGGACGAAGCCATTAGAGAGTTCTACCTCTCCATCACCCCGAGTATTGCTCCTGTCTTTCTGG
ATTTTCCTCGATCACTGCTACCTCAGGAAGAGAAGGATTCTGAAGATGAAGATGAAGATGAGAATCAAGAAGAGATGCCCTCAGATGAGGATTAA
mRNA sequenceShow/hide mRNA sequence
ATGAGGGCCAGAATGCGACCGCATTCGGGCCGCATGCTGAAGAAGGTCAAGATGAGGCCACTAATGAATAGCCAGCTGATGAGGTCTTCGAACCTCTATTCAAATATGAT
CCACCAGCTGCTGACAGCACCTGTTCGGGAGAGAAGAGGGATGACGAAGACATTGAGGAAAAAGAGAAGAAGAGAGATCAGGGCAGAAAGGAGGACCAAAAACAAGAATG
ACCCCATATTTGCCAAGAGGCCGAGGACTAGGTCCATGGACGCCTCTCCTGCAGTTCCTCCAACCATCTCACCTACCAAGCTGAAAGCCAAATCCCCTAAGGCTGCATCT
CCTAAAAATCCATTCCCAGAAGTCTTCAAAGATGTAAATTTTCAGGAACGGATGGAGATCATGAGAAAAAAAGATTTCTTGAATGAGAAGGGATTCTCTAACAGAGCAGG
GACACTGCCAGAGTTCGTAACCAGAGTTATCTCACAGTATAAGTGGCAGGAGTTCTGTGCTCACCCTCAGGAGGCCGTGGTGCCTTTAGTTCGAGAATTTTACGTCGGCC
TGAGGGATAAAAGCATAATATGGCTTCACTTTATCAAGAACCGGTTGATGCCAACAACCCATGACAGCACCATCTCAGTAGAGAGAGTTATGCTCCTCTACAATATTATG
AATGGTTTGGTGATCAACATCGGGAGCATTATCAGGGAGGAGATCCTTGCCTGTGGAAGGAAAAGAGCAGGAAAGCTTTTCTTTGGGTCATTGATCACCCAGCTATATCA
GAGGGTGAAGATAGTCCCTGGTAAGGATGAGGAGCGTCATTTCTTCAGGGACGAAGCCATTAGAGAGTTCTACCTCTCCATCACCCCGAGTATTGCTCCTGTCTTTCTGG
ATTTTCCTCGATCACTGCTACCTCAGGAAGAGAAGGATTCTGAAGATGAAGATGAAGATGAGAATCAAGAAGAGATGCCCTCAGATGAGGATTAA
Protein sequenceShow/hide protein sequence
MRARMRPHSGRMLKKVKMRPLMNSQLMRSSNLYSNMIHQLLTAPVRERRGMTKTLRKKRRREIRAERRTKNKNDPIFAKRPRTRSMDASPAVPPTISPTKLKAKSPKAAS
PKNPFPEVFKDVNFQERMEIMRKKDFLNEKGFSNRAGTLPEFVTRVISQYKWQEFCAHPQEAVVPLVREFYVGLRDKSIIWLHFIKNRLMPTTHDSTISVERVMLLYNIM
NGLVINIGSIIREEILACGRKRAGKLFFGSLITQLYQRVKIVPGKDEERHFFRDEAIREFYLSITPSIAPVFLDFPRSLLPQEEKDSEDEDEDENQEEMPSDED