; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg028138 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg028138
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionGag-protease polyprotein
Genome locationscaffold2:44688704..44691487
RNA-Seq ExpressionSpg028138
SyntenySpg028138
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0038227.1 hypothetical protein E6C27_scaffold270G00670 [Cucumis melo var. makuwa]5.4e-0650Show/hide
Query:  CISRKTEVVPSPSWFVITITEPSPSQGYERVGPLVQGSESVLKGTTSLLTLKWVTVNSVLQSY-VPSYLSSLILKMVGLL
        C  R T+ + + +WF +     +PS+  E+VGPLVQ  +SVLKGTT LL+ KWV VNSVL    + SYL  L L+M GLL
Subjt:  CISRKTEVVPSPSWFVITITEPSPSQGYERVGPLVQGSESVLKGTTSLLTLKWVTVNSVLQSY-VPSYLSSLILKMVGLL

KAA0047518.1 gag-protease polyprotein [Cucumis melo var. makuwa]7.1e-0656.36Show/hide
Query:  SWFVITITEPSPSQGYERVGPLVQGSESVLKGTTSLLTLKWVTVNSVLQSYVPSY
        +WF +     +PS+  E+VGPLVQ  +SVLKGTT LL+ KWV VN  L  YVPSY
Subjt:  SWFVITITEPSPSQGYERVGPLVQGSESVLKGTTSLLTLKWVTVNSVLQSYVPSY

KAA0047869.1 hypothetical protein E6C27_scaffold133G001380 [Cucumis melo var. makuwa]1.0e-1249.51Show/hide
Query:  SWFVITITEPSPSQGYERVGPLVQGSESVLKGTTSLLTLKWVTVNSVLQSYVPSYLSSLILKMVGLLSRRCLATLTHANQRTILNKQEFIVSSGLRSSYL
        +WF + +   +PS+  E+VGPLVQ  +SVLKGTT LL+ KWV VNSVL     +  S L  K   L  R+ +A  T+ + R + N+Q+FIVSSGLRSSYL
Subjt:  SWFVITITEPSPSQGYERVGPLVQGSESVLKGTTSLLTLKWVTVNSVLQSYVPSYLSSLILKMVGLLSRRCLATLTHANQRTILNKQEFIVSSGLRSSYL

Query:  GYY
        G++
Subjt:  GYY

KAA0054446.1 hypothetical protein E6C27_scaffold24G002070 [Cucumis melo var. makuwa]2.0e-0853.01Show/hide
Query:  GPLVQGSESVLKGTTSLLTLKWVTVNSVLQSYVPSYLSSLILKMVGLLSRRCLATLTHANQRTILNKQEFIVSSGLRSSYLGY
        GP VQ  +SVLKGTT LLTLKWV VNS+L    P+   SL LK             T+A+ R I  +QEF VSSGLR SYLG+
Subjt:  GPLVQGSESVLKGTTSLLTLKWVTVNSVLQSYVPSYLSSLILKMVGLLSRRCLATLTHANQRTILNKQEFIVSSGLRSSYLGY

TYK30622.1 hypothetical protein E5676_scaffold84664G00370 [Cucumis melo var. makuwa]9.2e-0650Show/hide
Query:  CISRKTEVVPSPSWFVITITEPSPSQGYERVGPLVQGSESVLKGTTSLLTLKWVTVNSVLQSY-VPSYLSSLILKMVGLL
        C  R T+ + + +WF +     +PS+  E+VGPLVQ  +SVLKGTT LL+ KWV VNSVL    + SYL  L L+M GLL
Subjt:  CISRKTEVVPSPSWFVITITEPSPSQGYERVGPLVQGSESVLKGTTSLLTLKWVTVNSVLQSY-VPSYLSSLILKMVGLL

TrEMBL top hitse value%identityAlignment
A0A5A7T9D5 Uncharacterized protein2.6e-0650Show/hide
Query:  CISRKTEVVPSPSWFVITITEPSPSQGYERVGPLVQGSESVLKGTTSLLTLKWVTVNSVLQSY-VPSYLSSLILKMVGLL
        C  R T+ + + +WF +     +PS+  E+VGPLVQ  +SVLKGTT LL+ KWV VNSVL    + SYL  L L+M GLL
Subjt:  CISRKTEVVPSPSWFVITITEPSPSQGYERVGPLVQGSESVLKGTTSLLTLKWVTVNSVLQSY-VPSYLSSLILKMVGLL

A0A5A7U348 Uncharacterized protein4.9e-1349.51Show/hide
Query:  SWFVITITEPSPSQGYERVGPLVQGSESVLKGTTSLLTLKWVTVNSVLQSYVPSYLSSLILKMVGLLSRRCLATLTHANQRTILNKQEFIVSSGLRSSYL
        +WF + +   +PS+  E+VGPLVQ  +SVLKGTT LL+ KWV VNSVL     +  S L  K   L  R+ +A  T+ + R + N+Q+FIVSSGLRSSYL
Subjt:  SWFVITITEPSPSQGYERVGPLVQGSESVLKGTTSLLTLKWVTVNSVLQSYVPSYLSSLILKMVGLLSRRCLATLTHANQRTILNKQEFIVSSGLRSSYL

Query:  GYY
        G++
Subjt:  GYY

A0A5D3CRT6 Uncharacterized protein9.6e-0953.01Show/hide
Query:  GPLVQGSESVLKGTTSLLTLKWVTVNSVLQSYVPSYLSSLILKMVGLLSRRCLATLTHANQRTILNKQEFIVSSGLRSSYLGY
        GP VQ  +SVLKGTT LLTLKWV VNS+L    P+   SL LK             T+A+ R I  +QEF VSSGLR SYLG+
Subjt:  GPLVQGSESVLKGTTSLLTLKWVTVNSVLQSYVPSYLSSLILKMVGLLSRRCLATLTHANQRTILNKQEFIVSSGLRSSYLGY

A0A5D3DRY2 Gag-protease polyprotein3.4e-0656.36Show/hide
Query:  SWFVITITEPSPSQGYERVGPLVQGSESVLKGTTSLLTLKWVTVNSVLQSYVPSY
        +WF +     +PS+  E+VGPLVQ  +SVLKGTT LL+ KWV VN  L  YVPSY
Subjt:  SWFVITITEPSPSQGYERVGPLVQGSESVLKGTTSLLTLKWVTVNSVLQSYVPSY

A0A5D3E3Z2 Uncharacterized protein4.5e-0650Show/hide
Query:  CISRKTEVVPSPSWFVITITEPSPSQGYERVGPLVQGSESVLKGTTSLLTLKWVTVNSVLQSY-VPSYLSSLILKMVGLL
        C  R T+ + + +WF +     +PS+  E+VGPLVQ  +SVLKGTT LL+ KWV VNSVL    + SYL  L L+M GLL
Subjt:  CISRKTEVVPSPSWFVITITEPSPSQGYERVGPLVQGSESVLKGTTSLLTLKWVTVNSVLQSY-VPSYLSSLILKMVGLL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTGTTCATAAGTGCTAAAAACAGAGTAAGTAGCACCTACCTCTTGAAGCTCCCAATTTGTGTAATCCGAGGCTTTAAACTTCACACCAACGGCTCTTGGACAACCAC
TTGGATCTTCTCTACTATCCTCGGGCCTTGGAACGGATTGTGGGATCCTCAATTGATAGGAATTGGAAAGGAAAGCTTATGGGTTCATGCAAATTTGAGAGAAAACAGAG
GAAAGCTGGAATTTGCCCAGAAATGCGACCGCATTTCTGGGAAGACCAAAATCAAATGCGACTGCATTTCTAGAAAAACAGAGGTCGTTCCGAGTCCGTCGTGGTTCGTG
ATTACAATCACTGAACCAAGTCCCTCTCAAGGTTATGAGAGGGTGGGACCCCTCGTTCAAGGCTCGGAGTCAGTACTTAAGGGAACAACCTCTTTACTAACCCTAAAATG
GGTAACAGTGAATTCCGTCTTACAAAGCTATGTCCCCAGCTATCTATCCAGTCTTATCCTCAAAATGGTAGGCTTATTGAGTCGGCGATGTTTGGCCACTCTCACCCATG
CAAATCAAAGGACAATCCTAAATAAACAGGAGTTCATAGTTAGCTCAGGATTAAGATCGAGTTACCTAGGTTACTATGTATGA
mRNA sequenceShow/hide mRNA sequence
ATGTTGTTCATAAGTGCTAAAAACAGAGTAAGTAGCACCTACCTCTTGAAGCTCCCAATTTGTGTAATCCGAGGCTTTAAACTTCACACCAACGGCTCTTGGACAACCAC
TTGGATCTTCTCTACTATCCTCGGGCCTTGGAACGGATTGTGGGATCCTCAATTGATAGGAATTGGAAAGGAAAGCTTATGGGTTCATGCAAATTTGAGAGAAAACAGAG
GAAAGCTGGAATTTGCCCAGAAATGCGACCGCATTTCTGGGAAGACCAAAATCAAATGCGACTGCATTTCTAGAAAAACAGAGGTCGTTCCGAGTCCGTCGTGGTTCGTG
ATTACAATCACTGAACCAAGTCCCTCTCAAGGTTATGAGAGGGTGGGACCCCTCGTTCAAGGCTCGGAGTCAGTACTTAAGGGAACAACCTCTTTACTAACCCTAAAATG
GGTAACAGTGAATTCCGTCTTACAAAGCTATGTCCCCAGCTATCTATCCAGTCTTATCCTCAAAATGGTAGGCTTATTGAGTCGGCGATGTTTGGCCACTCTCACCCATG
CAAATCAAAGGACAATCCTAAATAAACAGGAGTTCATAGTTAGCTCAGGATTAAGATCGAGTTACCTAGGTTACTATGTATGA
Protein sequenceShow/hide protein sequence
MLFISAKNRVSSTYLLKLPICVIRGFKLHTNGSWTTTWIFSTILGPWNGLWDPQLIGIGKESLWVHANLRENRGKLEFAQKCDRISGKTKIKCDCISRKTEVVPSPSWFV
ITITEPSPSQGYERVGPLVQGSESVLKGTTSLLTLKWVTVNSVLQSYVPSYLSSLILKMVGLLSRRCLATLTHANQRTILNKQEFIVSSGLRSSYLGYYV