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Spg028185 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg028185
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionReverse transcriptase domain-containing protein
Genome locationscaffold2:41811618..41816933
RNA-Seq ExpressionSpg028185
SyntenySpg028185
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
EXB53755.1 hypothetical protein L484_022412 [Morus notabilis]4.0e-1737.23Show/hide
Query:  SNDQLNAAVREVGIEGAQWRLSKTENHTFQAAYLKSEANTWMGFIKLRLLPTTHDSTVSRDRVLLVFSILRSMSIDVGKIISSEIMDC-WRKKVGKLFFP
        +++QL   + EV IEGA W++S    +T     LK  A  W  F+  R +P+TH  TV++DRVLL++SIL  +S+++ +I   EI  C   +K G L+FP
Subjt:  SNDQLNAAVREVGIEGAQWRLSKTENHTFQAAYLKSEANTWMGFIKLRLLPTTHDSTVSRDRVLLVFSILRSMSIDVGKIISSEIMDC-WRKKVGKLFFP

Query:  NTITMLCQRAGVPMNADDVTLMDKGIIDTPNLARLQK
        + IT L  +A VP + D+  + + G I T +++R+ +
Subjt:  NTITMLCQRAGVPMNADDVTLMDKGIIDTPNLARLQK

PON35554.1 hypothetical protein PanWU01x14_335450, partial [Parasponia andersonii]6.1e-1842.22Show/hide
Query:  LNAAVREVGIEGAQWRLSKTENHTFQAAYLKSEANTWMGFIKLRLLPTTHDSTVSRDRVLLVFSILRSMSIDVGKIISSEIMDCWRKKVGKLFFPNTITM
        L   +  V + GA+W +S    +T   + L   A  W  F+K  LLPTTH  TVS+DR+LL+ S+L   SI+VG++I SEI  C  +K G LFFP+ IT 
Subjt:  LNAAVREVGIEGAQWRLSKTENHTFQAAYLKSEANTWMGFIKLRLLPTTHDSTVSRDRVLLVFSILRSMSIDVGKIISSEIMDCWRKKVGKLFFPNTITM

Query:  LCQRAGVPMNADDVTLMDKGIIDTPNLARLQKTQE
        LC+ A  P   ++  L + G ID   +AR+  TQE
Subjt:  LCQRAGVPMNADDVTLMDKGIIDTPNLARLQKTQE

PON46472.1 hypothetical protein PanWU01x14_251180, partial [Parasponia andersonii]4.7e-1841.04Show/hide
Query:  SNDQLNAAVREVGIEGAQWRLSKTENHTFQAAYLKSEANTWMGFIKLRLLPTTHDSTVSRDRVLLVFSILRSMSIDVGKIISSEIMDCWRKKVGKLFFPN
        +   L   +  V   GA+W +S    +T   + L   A  W  F+K RLLPTTH  TVS+DR+LL+ S+L   SI+VG++I SEI  C  +K G LFFP+
Subjt:  SNDQLNAAVREVGIEGAQWRLSKTENHTFQAAYLKSEANTWMGFIKLRLLPTTHDSTVSRDRVLLVFSILRSMSIDVGKIISSEIMDCWRKKVGKLFFPN

Query:  TITMLCQRAGVPMNADDVTLMDKGIIDTPNLARL
         IT LC+ A  P   ++  L + G ID   +AR+
Subjt:  TITMLCQRAGVPMNADDVTLMDKGIIDTPNLARL

PON62892.1 hypothetical protein PanWU01x14_135680 [Parasponia andersonii]2.3e-1740.58Show/hide
Query:  VVAPSNDQLNAAVREVGIEGAQWRLSKTENHTFQAAYLKSEANTWMGFIKLRLLPTTHDSTVSRDRVLLVFSILRSMSIDVGKIISSEIMDCWRKKVGKL
        V A +  +L   +  V I GA+W +S    +T   + L   A  W  F+K RLLPTTH  TVS++RVLL++S+L   SI+VG+II  EI     +K G L
Subjt:  VVAPSNDQLNAAVREVGIEGAQWRLSKTENHTFQAAYLKSEANTWMGFIKLRLLPTTHDSTVSRDRVLLVFSILRSMSIDVGKIISSEIMDCWRKKVGKL

Query:  FFPNTITMLCQRAGVPMNADDVTLMDKGIIDTPNLARL
        FFP+ IT +C  A  P   ++  L + G ID   +AR+
Subjt:  FFPNTITMLCQRAGVPMNADDVTLMDKGIIDTPNLARL

XP_024971944.1 uncharacterized protein LOC112510826 [Cynara cardunculus var. scolymus]1.4e-1735.62Show/hide
Query:  REVGIEGAQWRL-SKTENHTFQAAYLKSEANTWMGFIKLRLLPTTHDSTVSRDRVLLVFSILRSMSIDVGKIISSEIMDCWRKKVGKLFFPNTITMLCQR
        RE+G  G +W   S     T++A+ LK  AN W+ FI+  L PTTHDS++S ++++L++ ++   +I+VGK++   I+ C +++ GKLFFP+ I  L  +
Subjt:  REVGIEGAQWRL-SKTENHTFQAAYLKSEANTWMGFIKLRLLPTTHDSTVSRDRVLLVFSILRSMSIDVGKIISSEIMDCWRKKVGKLFFPNTITMLCQR

Query:  AGVPMNADDVTLM---DKGIIDTPNLARLQKTQEARQGGLVCDIHQMQEQLQMHSSRMEF
        AGVP   DD+ +    +K  ID   +++L++  E R   L      M+E L+   S M+F
Subjt:  AGVPMNADDVTLM---DKGIIDTPNLARLQKTQEARQGGLVCDIHQMQEQLQMHSSRMEF

TrEMBL top hitse value%identityAlignment
A0A2P5AGA5 Uncharacterized protein (Fragment)3.0e-1842.22Show/hide
Query:  LNAAVREVGIEGAQWRLSKTENHTFQAAYLKSEANTWMGFIKLRLLPTTHDSTVSRDRVLLVFSILRSMSIDVGKIISSEIMDCWRKKVGKLFFPNTITM
        L   +  V + GA+W +S    +T   + L   A  W  F+K  LLPTTH  TVS+DR+LL+ S+L   SI+VG++I SEI  C  +K G LFFP+ IT 
Subjt:  LNAAVREVGIEGAQWRLSKTENHTFQAAYLKSEANTWMGFIKLRLLPTTHDSTVSRDRVLLVFSILRSMSIDVGKIISSEIMDCWRKKVGKLFFPNTITM

Query:  LCQRAGVPMNADDVTLMDKGIIDTPNLARLQKTQE
        LC+ A  P   ++  L + G ID   +AR+  TQE
Subjt:  LCQRAGVPMNADDVTLMDKGIIDTPNLARLQKTQE

A0A2P5BCG4 Uncharacterized protein (Fragment)2.3e-1841.04Show/hide
Query:  SNDQLNAAVREVGIEGAQWRLSKTENHTFQAAYLKSEANTWMGFIKLRLLPTTHDSTVSRDRVLLVFSILRSMSIDVGKIISSEIMDCWRKKVGKLFFPN
        +   L   +  V   GA+W +S    +T   + L   A  W  F+K RLLPTTH  TVS+DR+LL+ S+L   SI+VG++I SEI  C  +K G LFFP+
Subjt:  SNDQLNAAVREVGIEGAQWRLSKTENHTFQAAYLKSEANTWMGFIKLRLLPTTHDSTVSRDRVLLVFSILRSMSIDVGKIISSEIMDCWRKKVGKLFFPN

Query:  TITMLCQRAGVPMNADDVTLMDKGIIDTPNLARL
         IT LC+ A  P   ++  L + G ID   +AR+
Subjt:  TITMLCQRAGVPMNADDVTLMDKGIIDTPNLARL

A0A2P5BNT0 Uncharacterized protein (Fragment)9.5e-1738.93Show/hide
Query:  QLNAAVREVGIEGAQWRLSKTENHTFQAAYLKSEANTWMGFIKLRLLPTTHDSTVSRDRVLLVFSILRSMSIDVGKIISSEIMDCWRKKVGKLFFPNTIT
        +L   +  V I GA+W +S    +T   + L   A  W  F+K RLLPTTH   VS++RVLL++S+L   SI++G++I  EI  C  +K G LFFP+ I 
Subjt:  QLNAAVREVGIEGAQWRLSKTENHTFQAAYLKSEANTWMGFIKLRLLPTTHDSTVSRDRVLLVFSILRSMSIDVGKIISSEIMDCWRKKVGKLFFPNTIT

Query:  MLCQRAGVPMNADDVTLMDKGIIDTPNLARL
         +C+ A  P   ++  L + G ID   +AR+
Subjt:  MLCQRAGVPMNADDVTLMDKGIIDTPNLARL

A0A2P5CPE8 Uncharacterized protein1.1e-1740.58Show/hide
Query:  VVAPSNDQLNAAVREVGIEGAQWRLSKTENHTFQAAYLKSEANTWMGFIKLRLLPTTHDSTVSRDRVLLVFSILRSMSIDVGKIISSEIMDCWRKKVGKL
        V A +  +L   +  V I GA+W +S    +T   + L   A  W  F+K RLLPTTH  TVS++RVLL++S+L   SI+VG+II  EI     +K G L
Subjt:  VVAPSNDQLNAAVREVGIEGAQWRLSKTENHTFQAAYLKSEANTWMGFIKLRLLPTTHDSTVSRDRVLLVFSILRSMSIDVGKIISSEIMDCWRKKVGKL

Query:  FFPNTITMLCQRAGVPMNADDVTLMDKGIIDTPNLARL
        FFP+ IT +C  A  P   ++  L + G ID   +AR+
Subjt:  FFPNTITMLCQRAGVPMNADDVTLMDKGIIDTPNLARL

W9QTD9 Uncharacterized protein1.9e-1737.23Show/hide
Query:  SNDQLNAAVREVGIEGAQWRLSKTENHTFQAAYLKSEANTWMGFIKLRLLPTTHDSTVSRDRVLLVFSILRSMSIDVGKIISSEIMDC-WRKKVGKLFFP
        +++QL   + EV IEGA W++S    +T     LK  A  W  F+  R +P+TH  TV++DRVLL++SIL  +S+++ +I   EI  C   +K G L+FP
Subjt:  SNDQLNAAVREVGIEGAQWRLSKTENHTFQAAYLKSEANTWMGFIKLRLLPTTHDSTVSRDRVLLVFSILRSMSIDVGKIISSEIMDC-WRKKVGKLFFP

Query:  NTITMLCQRAGVPMNADDVTLMDKGIIDTPNLARLQK
        + IT L  +A VP + D+  + + G I T +++R+ +
Subjt:  NTITMLCQRAGVPMNADDVTLMDKGIIDTPNLARLQK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTGGTAGCGCCATCAAATGATCAGTTAAATGCGGCTGTCAGAGAGGTTGGCATCGAGGGGGCTCAGTGGAGACTGTCGAAGACAGAAAATCACACATTCCAAGCGGC
TTATCTGAAGAGTGAAGCCAATACATGGATGGGCTTCATCAAGCTGCGCTTGCTGCCGACGACTCACGATTCAACGGTGTCTCGAGATCGGGTACTTCTTGTGTTTTCTA
TTCTTCGTTCGATGAGTATTGATGTGGGCAAAATTATTTCTAGCGAGATTATGGATTGCTGGCGGAAAAAGGTTGGGAAACTGTTTTTCCCGAACACCATAACAATGTTA
TGCCAAAGGGCAGGGGTTCCAATGAATGCTGATGATGTGACTTTAATGGACAAGGGAATAATCGACACACCAAACTTGGCTAGGCTTCAAAAGACACAAGAAGCACGTCA
AGGCGGTTTGGTGTGCGACATCCATCAAATGCAGGAGCAATTACAGATGCATTCCAGCAGGATGGAATTCTGTCGCCGCCTGTTGAAAGAGAAGCTTGGACTGGTTAGGC
TTAGTTATATCAAGCAGAGCTTGGTTTTGCAGAATGCTCAGGTGGAGGTTGAAGGTAGTGTTGGATTATCTGTTTTGATTAAGTTATGCTTTGTCCAACGTTTTGAATTC
TTAAGGGAAGGTTGGTTAGCATTGCTAGGGACGCGCAATAGTTTAAGTTTGGGGTGCGAATTCCAGCAGCATCGCATCTCGTTTAGTGGTGTTTGGAGTTTATCTGGATC
TTTTGAGCTGTTTAAGGAGTTCTTCAGGAGTGCTCGTAAGCTTCCGGGTCTTGGGTGTAAATGGTCGAGGGCTGATATATCACTATTGGATGTCAAGGCCTCGGGTATAA
ATGGTCGAGGGTCGATATGCCAATGGTCGGTGCGACTCGAAGGGTCAATCTTGGAGAGTTTTGTAGAGCGTGACGCGAAAATCACGTGTGAGTGTGCGGGCATGGCACGG
AAACCATGTGGAGATTATGTAGGTTATGAGGACTGCCTTGACCATGGTGATGCAAAGGAGGCGCATGAGGAAGGACCATAG
mRNA sequenceShow/hide mRNA sequence
ATGGTGGTAGCGCCATCAAATGATCAGTTAAATGCGGCTGTCAGAGAGGTTGGCATCGAGGGGGCTCAGTGGAGACTGTCGAAGACAGAAAATCACACATTCCAAGCGGC
TTATCTGAAGAGTGAAGCCAATACATGGATGGGCTTCATCAAGCTGCGCTTGCTGCCGACGACTCACGATTCAACGGTGTCTCGAGATCGGGTACTTCTTGTGTTTTCTA
TTCTTCGTTCGATGAGTATTGATGTGGGCAAAATTATTTCTAGCGAGATTATGGATTGCTGGCGGAAAAAGGTTGGGAAACTGTTTTTCCCGAACACCATAACAATGTTA
TGCCAAAGGGCAGGGGTTCCAATGAATGCTGATGATGTGACTTTAATGGACAAGGGAATAATCGACACACCAAACTTGGCTAGGCTTCAAAAGACACAAGAAGCACGTCA
AGGCGGTTTGGTGTGCGACATCCATCAAATGCAGGAGCAATTACAGATGCATTCCAGCAGGATGGAATTCTGTCGCCGCCTGTTGAAAGAGAAGCTTGGACTGGTTAGGC
TTAGTTATATCAAGCAGAGCTTGGTTTTGCAGAATGCTCAGGTGGAGGTTGAAGGTAGTGTTGGATTATCTGTTTTGATTAAGTTATGCTTTGTCCAACGTTTTGAATTC
TTAAGGGAAGGTTGGTTAGCATTGCTAGGGACGCGCAATAGTTTAAGTTTGGGGTGCGAATTCCAGCAGCATCGCATCTCGTTTAGTGGTGTTTGGAGTTTATCTGGATC
TTTTGAGCTGTTTAAGGAGTTCTTCAGGAGTGCTCGTAAGCTTCCGGGTCTTGGGTGTAAATGGTCGAGGGCTGATATATCACTATTGGATGTCAAGGCCTCGGGTATAA
ATGGTCGAGGGTCGATATGCCAATGGTCGGTGCGACTCGAAGGGTCAATCTTGGAGAGTTTTGTAGAGCGTGACGCGAAAATCACGTGTGAGTGTGCGGGCATGGCACGG
AAACCATGTGGAGATTATGTAGGTTATGAGGACTGCCTTGACCATGGTGATGCAAAGGAGGCGCATGAGGAAGGACCATAG
Protein sequenceShow/hide protein sequence
MVVAPSNDQLNAAVREVGIEGAQWRLSKTENHTFQAAYLKSEANTWMGFIKLRLLPTTHDSTVSRDRVLLVFSILRSMSIDVGKIISSEIMDCWRKKVGKLFFPNTITML
CQRAGVPMNADDVTLMDKGIIDTPNLARLQKTQEARQGGLVCDIHQMQEQLQMHSSRMEFCRRLLKEKLGLVRLSYIKQSLVLQNAQVEVEGSVGLSVLIKLCFVQRFEF
LREGWLALLGTRNSLSLGCEFQQHRISFSGVWSLSGSFELFKEFFRSARKLPGLGCKWSRADISLLDVKASGINGRGSICQWSVRLEGSILESFVERDAKITCECAGMAR
KPCGDYVGYEDCLDHGDAKEAHEEGP