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Spg028195 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg028195
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
Descriptionnuclear transcription factor Y subunit B-4-like
Genome locationscaffold2:42056656..42056922
RNA-Seq ExpressionSpg028195
SyntenySpg028195
Gene Ontology termsGO:0005975 - carbohydrate metabolic process (biological process)
GO:0045944 - positive regulation of transcription by RNA polymerase II (biological process)
GO:0016602 - CCAAT-binding factor complex (cellular component)
GO:0048046 - apoplast (cellular component)
GO:0000978 - RNA polymerase II proximal promoter sequence-specific DNA binding (molecular function)
GO:0001228 - DNA-binding transcription activator activity, RNA polymerase II-specific (molecular function)
GO:0004565 - beta-galactosidase activity (molecular function)
GO:0030246 - carbohydrate binding (molecular function)
GO:0046982 - protein heterodimerization activity (molecular function)
InterPro domainsIPR003958 - Transcription factor CBF/NF-Y/archaeal histone domain
IPR009072 - Histone-fold
IPR027113 - Transcription factor NFYB/HAP3


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6590402.1 Nuclear transcription factor Y subunit B-4, partial [Cucurbita argyrosperma subsp. sororia]4.8e-3384.09Show/hide
Query:  MKKILPRTAKVSKEAKETMQECATEFISFVTSEAAEKCQKENRRTLNGDDICWAFGALGLDNYAEASAKYLFKYRDDERIKAENKSNI
        MKKILP+ AK+SKEAK TMQECATEFISFVTSEAAEKC K+NRRTLNGDDICWAFG+ GLDNYAEASAKYL KYRD ERI A+ K+NI
Subjt:  MKKILPRTAKVSKEAKETMQECATEFISFVTSEAAEKCQKENRRTLNGDDICWAFGALGLDNYAEASAKYLFKYRDDERIKAENKSNI

XP_022961414.1 nuclear transcription factor Y subunit B-4-like [Cucurbita moschata]4.8e-3384.09Show/hide
Query:  MKKILPRTAKVSKEAKETMQECATEFISFVTSEAAEKCQKENRRTLNGDDICWAFGALGLDNYAEASAKYLFKYRDDERIKAENKSNI
        MKKILP+ AK+SKEAK TMQECATEFISFVTSEAAEKC K+NRRTLNGDDICWAFG+ GLDNYAEASAKYL KYRD ERI A+ K+NI
Subjt:  MKKILPRTAKVSKEAKETMQECATEFISFVTSEAAEKCQKENRRTLNGDDICWAFGALGLDNYAEASAKYLFKYRDDERIKAENKSNI

XP_022968852.1 nuclear transcription factor Y subunit B-4-like [Cucurbita maxima]4.8e-3384.09Show/hide
Query:  MKKILPRTAKVSKEAKETMQECATEFISFVTSEAAEKCQKENRRTLNGDDICWAFGALGLDNYAEASAKYLFKYRDDERIKAENKSNI
        MKKILP+ AK+SKEAK TMQECATEFISFVTSEAAEKC K+NRRTLNGDDICWAFG+ GLDNYAEASAKYL KYRD ERI A+ K+NI
Subjt:  MKKILPRTAKVSKEAKETMQECATEFISFVTSEAAEKCQKENRRTLNGDDICWAFGALGLDNYAEASAKYLFKYRDDERIKAENKSNI

XP_023546470.1 nuclear transcription factor Y subunit B-4-like [Cucurbita pepo subsp. pepo]4.8e-3384.09Show/hide
Query:  MKKILPRTAKVSKEAKETMQECATEFISFVTSEAAEKCQKENRRTLNGDDICWAFGALGLDNYAEASAKYLFKYRDDERIKAENKSNI
        MKKILP+ AK+SKEAK TMQECATEFISFVTSEAAEKC K+NRRTLNGDDICWAFG+ GLDNYAEASAKYL KYRD ERI A+ K+NI
Subjt:  MKKILPRTAKVSKEAKETMQECATEFISFVTSEAAEKCQKENRRTLNGDDICWAFGALGLDNYAEASAKYLFKYRDDERIKAENKSNI

XP_038880507.1 nuclear transcription factor Y subunit B-4-like [Benincasa hispida]1.0e-3080.23Show/hide
Query:  MKKILPRTAKVSKEAKETMQECATEFISFVTSEAAEKCQKENRRTLNGDDICWAFGALGLDNYAEASAKYLFKYRDDERIKAENKS
        MKKILP+ AK+SKEAKETMQECA+EFISFV SEAAEKC KENRRTLNGDDICWA G+ GLDNYAE SAKYL K+R+ ERIK  NK+
Subjt:  MKKILPRTAKVSKEAKETMQECATEFISFVTSEAAEKCQKENRRTLNGDDICWAFGALGLDNYAEASAKYLFKYRDDERIKAENKS

TrEMBL top hitse value%identityAlignment
A0A067JU24 CBFD_NFYB_HMF domain-containing protein6.6e-2872.41Show/hide
Query:  MKKILPRTAKVSKEAKETMQECATEFISFVTSEAAEKCQKENRRTLNGDDICWAFGALGLDNYAEASAKYLFKYRDDERIKAENKSN
        MK+ILP +AK+SKEAK+TMQECATEFISFVT EA++KCQKENR+T+NGDDICWA  +LG DNYAEA  +YL KYR+ ER KA N  N
Subjt:  MKKILPRTAKVSKEAKETMQECATEFISFVTSEAAEKCQKENRRTLNGDDICWAFGALGLDNYAEASAKYLFKYRDDERIKAENKSN

A0A6A1UNL9 Nuclear transcription factor Y subunit B-45.1e-2872.73Show/hide
Query:  MKKILPRTAKVSKEAKETMQECATEFISFVTSEAAEKCQKENRRTLNGDDICWAFGALGLDNYAEASAKYLFKYRDDERIKA-ENKSN
        MK+ILP TAK+SKEAK+TMQECATEFISFVT+EA++KC KENR+T+NGDDICWA   LG DNYAEA  +YL+KYR+ ER KA +NK N
Subjt:  MKKILPRTAKVSKEAKETMQECATEFISFVTSEAAEKCQKENRRTLNGDDICWAFGALGLDNYAEASAKYLFKYRDDERIKA-ENKSN

A0A6J1CXT8 nuclear transcription factor Y subunit B-4-like7.1e-3077.65Show/hide
Query:  MKKILPRTAKVSKEAKETMQECATEFISFVTSEAAEKCQKENRRTLNGDDICWAFGALGLDNYAEASAKYLFKYRDDERIKAENK
        MKKI+P+T+K+SKEAK+TMQECATEFISFVTSEAAEKC +ENRRTLNG+DI WAFGALGLDNYA+A+AKYL  YRD + +K  NK
Subjt:  MKKILPRTAKVSKEAKETMQECATEFISFVTSEAAEKCQKENRRTLNGDDICWAFGALGLDNYAEASAKYLFKYRDDERIKAENK

A0A6J1HDY6 nuclear transcription factor Y subunit B-4-like2.3e-3384.09Show/hide
Query:  MKKILPRTAKVSKEAKETMQECATEFISFVTSEAAEKCQKENRRTLNGDDICWAFGALGLDNYAEASAKYLFKYRDDERIKAENKSNI
        MKKILP+ AK+SKEAK TMQECATEFISFVTSEAAEKC K+NRRTLNGDDICWAFG+ GLDNYAEASAKYL KYRD ERI A+ K+NI
Subjt:  MKKILPRTAKVSKEAKETMQECATEFISFVTSEAAEKCQKENRRTLNGDDICWAFGALGLDNYAEASAKYLFKYRDDERIKAENKSNI

A0A6J1HUN8 nuclear transcription factor Y subunit B-4-like2.3e-3384.09Show/hide
Query:  MKKILPRTAKVSKEAKETMQECATEFISFVTSEAAEKCQKENRRTLNGDDICWAFGALGLDNYAEASAKYLFKYRDDERIKAENKSNI
        MKKILP+ AK+SKEAK TMQECATEFISFVTSEAAEKC K+NRRTLNGDDICWAFG+ GLDNYAEASAKYL KYRD ERI A+ K+NI
Subjt:  MKKILPRTAKVSKEAKETMQECATEFISFVTSEAAEKCQKENRRTLNGDDICWAFGALGLDNYAEASAKYLFKYRDDERIKAENKSNI

SwissProt top hitse value%identityAlignment
O04027 Nuclear transcription factor Y subunit B-42.0e-2666.67Show/hide
Query:  MKKILPRTAKVSKEAKETMQECATEFISFVTSEAAEKCQKENRRTLNGDDICWAFGALGLDNYAEASAKYLFKYRDDERIKAEN
        MK+ILP  AK+SKEAK+T+QECATEFISFVT EA+EKC +ENR+T+NGDDI WA   LGLDNYA+A  ++L KYR+ ER + E+
Subjt:  MKKILPRTAKVSKEAKETMQECATEFISFVTSEAAEKCQKENRRTLNGDDICWAFGALGLDNYAEASAKYLFKYRDDERIKAEN

O23310 Nuclear transcription factor Y subunit B-35.8e-2158.97Show/hide
Query:  MKKILPRTAKVSKEAKETMQECATEFISFVTSEAAEKCQKENRRTLNGDDICWAFGALGLDNYAEASAKYLFKYRDDE
        MKK LP  AK+SK+AKET+QEC +EFISF+T EA++KCQ+E R+T+NGDD+ WA   LG ++Y E    YL KYR+ E
Subjt:  MKKILPRTAKVSKEAKETMQECATEFISFVTSEAAEKCQKENRRTLNGDDICWAFGALGLDNYAEASAKYLFKYRDDE

O82248 Nuclear transcription factor Y subunit B-51.2e-2369.33Show/hide
Query:  MKKILPRTAKVSKEAKETMQECATEFISFVTSEAAEKCQKENRRTLNGDDICWAFGALGLDNYAEASAKYLFKYR
        MK ILP  AKVSKEAKETMQEC +EFISFVT EA++KC KE R+T+NGDDICWA   LG D+YA    KYL +YR
Subjt:  MKKILPRTAKVSKEAKETMQECATEFISFVTSEAAEKCQKENRRTLNGDDICWAFGALGLDNYAEASAKYLFKYR

Q9FGJ3 Nuclear transcription factor Y subunit B-24.4e-2160.26Show/hide
Query:  MKKILPRTAKVSKEAKETMQECATEFISFVTSEAAEKCQKENRRTLNGDDICWAFGALGLDNYAEASAKYLFKYRDDE
        MKK LP  AK+SK+AKETMQEC +EFISFVT EA++KCQKE R+T+NGDD+ WA   LG ++Y E    YL ++R+ E
Subjt:  MKKILPRTAKVSKEAKETMQECATEFISFVTSEAAEKCQKENRRTLNGDDICWAFGALGLDNYAEASAKYLFKYRDDE

Q9SIT9 Nuclear transcription factor Y subunit B-72.0e-2157.14Show/hide
Query:  MKKILPRTAKVSKEAKETMQECATEFISFVTSEAAEKCQKENRRTLNGDDICWAFGALGLDNYAEASAKYLFKYRDDERIKAEN
        MKK+LP   K+SK+AKET+QEC +EFISFVT EA++KCQ+E R+T+NGDDI WA   LG ++Y      YL KYRD E  K  +
Subjt:  MKKILPRTAKVSKEAKETMQECATEFISFVTSEAAEKCQKENRRTLNGDDICWAFGALGLDNYAEASAKYLFKYRDDERIKAEN

Arabidopsis top hitse value%identityAlignment
AT1G09030.1 nuclear factor Y, subunit B41.5e-2766.67Show/hide
Query:  MKKILPRTAKVSKEAKETMQECATEFISFVTSEAAEKCQKENRRTLNGDDICWAFGALGLDNYAEASAKYLFKYRDDERIKAEN
        MK+ILP  AK+SKEAK+T+QECATEFISFVT EA+EKC +ENR+T+NGDDI WA   LGLDNYA+A  ++L KYR+ ER + E+
Subjt:  MKKILPRTAKVSKEAKETMQECATEFISFVTSEAAEKCQKENRRTLNGDDICWAFGALGLDNYAEASAKYLFKYRDDERIKAEN

AT2G13570.1 nuclear factor Y, subunit B71.4e-2257.14Show/hide
Query:  MKKILPRTAKVSKEAKETMQECATEFISFVTSEAAEKCQKENRRTLNGDDICWAFGALGLDNYAEASAKYLFKYRDDERIKAEN
        MKK+LP   K+SK+AKET+QEC +EFISFVT EA++KCQ+E R+T+NGDDI WA   LG ++Y      YL KYRD E  K  +
Subjt:  MKKILPRTAKVSKEAKETMQECATEFISFVTSEAAEKCQKENRRTLNGDDICWAFGALGLDNYAEASAKYLFKYRDDERIKAEN

AT2G47810.1 nuclear factor Y, subunit B58.8e-2569.33Show/hide
Query:  MKKILPRTAKVSKEAKETMQECATEFISFVTSEAAEKCQKENRRTLNGDDICWAFGALGLDNYAEASAKYLFKYR
        MK ILP  AKVSKEAKETMQEC +EFISFVT EA++KC KE R+T+NGDDICWA   LG D+YA    KYL +YR
Subjt:  MKKILPRTAKVSKEAKETMQECATEFISFVTSEAAEKCQKENRRTLNGDDICWAFGALGLDNYAEASAKYLFKYR

AT4G14540.1 nuclear factor Y, subunit B34.1e-2258.97Show/hide
Query:  MKKILPRTAKVSKEAKETMQECATEFISFVTSEAAEKCQKENRRTLNGDDICWAFGALGLDNYAEASAKYLFKYRDDE
        MKK LP  AK+SK+AKET+QEC +EFISF+T EA++KCQ+E R+T+NGDD+ WA   LG ++Y E    YL KYR+ E
Subjt:  MKKILPRTAKVSKEAKETMQECATEFISFVTSEAAEKCQKENRRTLNGDDICWAFGALGLDNYAEASAKYLFKYRDDE

AT5G47640.1 nuclear factor Y, subunit B23.1e-2260.26Show/hide
Query:  MKKILPRTAKVSKEAKETMQECATEFISFVTSEAAEKCQKENRRTLNGDDICWAFGALGLDNYAEASAKYLFKYRDDE
        MKK LP  AK+SK+AKETMQEC +EFISFVT EA++KCQKE R+T+NGDD+ WA   LG ++Y E    YL ++R+ E
Subjt:  MKKILPRTAKVSKEAKETMQECATEFISFVTSEAAEKCQKENRRTLNGDDICWAFGALGLDNYAEASAKYLFKYRDDE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGAAGATACTTCCGAGAACAGCCAAGGTTTCCAAAGAAGCCAAAGAGACAATGCAAGAATGTGCGACTGAGTTCATCAGCTTCGTAACAAGTGAAGCAGCAGAAAA
GTGTCAGAAAGAGAATCGTAGAACTCTCAATGGAGACGATATTTGTTGGGCTTTTGGTGCCCTTGGCTTAGACAACTATGCTGAGGCTTCTGCCAAGTACTTGTTCAAGT
ATAGAGATGATGAGAGAATCAAGGCTGAGAACAAAAGCAATATATAA
mRNA sequenceShow/hide mRNA sequence
ATGAAGAAGATACTTCCGAGAACAGCCAAGGTTTCCAAAGAAGCCAAAGAGACAATGCAAGAATGTGCGACTGAGTTCATCAGCTTCGTAACAAGTGAAGCAGCAGAAAA
GTGTCAGAAAGAGAATCGTAGAACTCTCAATGGAGACGATATTTGTTGGGCTTTTGGTGCCCTTGGCTTAGACAACTATGCTGAGGCTTCTGCCAAGTACTTGTTCAAGT
ATAGAGATGATGAGAGAATCAAGGCTGAGAACAAAAGCAATATATAA
Protein sequenceShow/hide protein sequence
MKKILPRTAKVSKEAKETMQECATEFISFVTSEAAEKCQKENRRTLNGDDICWAFGALGLDNYAEASAKYLFKYRDDERIKAENKSNI