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Spg028196 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg028196
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionCACTA en-spm transposon protein
Genome locationscaffold2:42923653..42928275
RNA-Seq ExpressionSpg028196
SyntenySpg028196
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0050066.1 CACTA en-spm transposon protein [Cucumis melo var. makuwa]4.0e-0934.43Show/hide
Query:  EKEGRDIDPIELFELTHSKNGKWVNQAAEDAH------------KGLNHSLDLSYVRRFWVNGLATLKAWDWGPKPSRSSTSGSTSVN---SGPTQRELE
        E+ G+ +D +ELF  TH + G +V+QAAEDAH            + ++HSL + Y  R WV+  AT KA+ WGPKP    T+ ++S++   S  T++E+E
Subjt:  EKEGRDIDPIELFELTHSKNGKWVNQAAEDAH------------KGLNHSLDLSYVRRFWVNGLATLKAWDWGPKPSRSSTSGSTSVN---SGPTQRELE

Query:  QQEEINTLKAKFKEQGESSTCL
         Q +++    + + Q ++   L
Subjt:  QQEEINTLKAKFKEQGESSTCL

KAA0052152.1 CACTA en-spm transposon protein [Cucumis melo var. makuwa]4.6e-0545.61Show/hide
Query:  EKEGRDIDPIELFELTHSKNGKWVNQAAEDAHKGLNHSLDLSYVRRFWVNGLATLKA
        E++G  +D +ELF  TH + G +V+QAAED H  ++HS+ + Y  R WV+  AT KA
Subjt:  EKEGRDIDPIELFELTHSKNGKWVNQAAEDAHKGLNHSLDLSYVRRFWVNGLATLKA

KAA0056007.1 CACTA en-spm transposon protein [Cucumis melo var. makuwa]1.6e-0547.37Show/hide
Query:  EKEGRDIDPIELFELTHSKNGKWVNQAAEDAHKGLNHSLDLSYVRRFWVNGLATLKA
        E++G+ +D +ELF  TH + G +V+QAAED H+  +HSL + Y  R WV+  AT KA
Subjt:  EKEGRDIDPIELFELTHSKNGKWVNQAAEDAHKGLNHSLDLSYVRRFWVNGLATLKA

KAA0062065.1 CACTA en-spm transposon protein [Cucumis melo var. makuwa]3.0e-0437.08Show/hide
Query:  EKEGRDIDPIELFELTHSKNGKWVNQAAEDAH------------KGLNHSLDLSYVRRFWVNGLATLKAWDWGPKPSRSSTSGSTSVNS
        EK G+ ID ++LF+ TH+ NG ++ QAA DAH            KG        Y R FWV+  AT K + W  +P    T+G++S +S
Subjt:  EKEGRDIDPIELFELTHSKNGKWVNQAAEDAH------------KGLNHSLDLSYVRRFWVNGLATLKAWDWGPKPSRSSTSGSTSVNS

TYK04955.1 CACTA en-spm transposon protein [Cucumis melo var. makuwa]3.0e-0437.08Show/hide
Query:  EKEGRDIDPIELFELTHSKNGKWVNQAAEDAH------------KGLNHSLDLSYVRRFWVNGLATLKAWDWGPKPSRSSTSGSTSVNS
        EK G+ ID ++LF+ TH+ NG ++ QAA DAH            KG        Y R FWV+  AT K + W  +P    T+G++S +S
Subjt:  EKEGRDIDPIELFELTHSKNGKWVNQAAEDAH------------KGLNHSLDLSYVRRFWVNGLATLKAWDWGPKPSRSSTSGSTSVNS

TrEMBL top hitse value%identityAlignment
A0A5A7U7B2 CACTA en-spm transposon protein1.9e-0934.43Show/hide
Query:  EKEGRDIDPIELFELTHSKNGKWVNQAAEDAH------------KGLNHSLDLSYVRRFWVNGLATLKAWDWGPKPSRSSTSGSTSVN---SGPTQRELE
        E+ G+ +D +ELF  TH + G +V+QAAEDAH            + ++HSL + Y  R WV+  AT KA+ WGPKP    T+ ++S++   S  T++E+E
Subjt:  EKEGRDIDPIELFELTHSKNGKWVNQAAEDAH------------KGLNHSLDLSYVRRFWVNGLATLKAWDWGPKPSRSSTSGSTSVN---SGPTQRELE

Query:  QQEEINTLKAKFKEQGESSTCL
         Q +++    + + Q ++   L
Subjt:  QQEEINTLKAKFKEQGESSTCL

A0A5A7U8S2 CACTA en-spm transposon protein2.2e-0545.61Show/hide
Query:  EKEGRDIDPIELFELTHSKNGKWVNQAAEDAHKGLNHSLDLSYVRRFWVNGLATLKA
        E++G  +D +ELF  TH + G +V+QAAED H  ++HS+ + Y  R WV+  AT KA
Subjt:  EKEGRDIDPIELFELTHSKNGKWVNQAAEDAHKGLNHSLDLSYVRRFWVNGLATLKA

A0A5A7UN26 CACTA en-spm transposon protein7.6e-0647.37Show/hide
Query:  EKEGRDIDPIELFELTHSKNGKWVNQAAEDAHKGLNHSLDLSYVRRFWVNGLATLKA
        E++G+ +D +ELF  TH + G +V+QAAED H+  +HSL + Y  R WV+  AT KA
Subjt:  EKEGRDIDPIELFELTHSKNGKWVNQAAEDAHKGLNHSLDLSYVRRFWVNGLATLKA

A0A5D3CAT5 CACTA en-spm transposon protein1.9e-0435.2Show/hide
Query:  EKEGRDIDPIELFELTHSKNGKWVNQAAEDAHKGLNHSLDL---SYVRRFWVNGLATLKAWDWGPK-PSRSSTSGSTSVNSGP--TQRELEQQEEINTLK
        EK+G  ID +ELF  TH +  K+V QA ED H     S  L             L   K   WGPK  +R + SGS+S  S P  TQ+E+E Q +IN   
Subjt:  EKEGRDIDPIELFELTHSKNGKWVNQAAEDAHKGLNHSLDL---SYVRRFWVNGLATLKAWDWGPK-PSRSSTSGSTSVNSGP--TQRELEQQEEINTLK

Query:  AKFKEQGESSTCLGQPNSSLSSLYK
         + + Q  + T L      +  L K
Subjt:  AKFKEQGESSTCLGQPNSSLSSLYK

A0A5D3CX62 CACTA en-spm transposon protein5.5e-0430.89Show/hide
Query:  EKEGRDIDPIELFELTHSKNGKWVNQAAEDAHKGLNHSLDLS---YVRRFWVNGLATLKAWDWGPKPS---RSSTSGSTSVNSGPTQRELEQQEEINTLK
        E+ G+ +D +ELF  TH + G +V+QAAEDAH  L  S  LS      +         K   WGPKP     +S S S++ +S  TQ+E+E Q +++   
Subjt:  EKEGRDIDPIELFELTHSKNGKWVNQAAEDAHKGLNHSLDLS---YVRRFWVNGLATLKAWDWGPKPS---RSSTSGSTSVNSGPTQRELEQQEEINTLK

Query:  AKFKEQGESSTCLGQPNSSLSSL
         + + Q  +   L     ++  +
Subjt:  AKFKEQGESSTCLGQPNSSLSSL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATCTGTCCATTAGGTCCCACCGGTAGCTCATTTAGGGCGTTGAGCGGGAAAAAGGAAGAAAATGCTGCTGTTTTTCTGCGATCTCTAGGAGAAAAGGCGATACCGAT
CAAGAATTTCTACAAGGGTAAGTGGTTTCTTAAAATTTTACTTGTGTTTGAATTGCAGAAAGAGAAGGAGGGTCGAGACATAGATCCCATTGAACTATTTGAACTGACCC
ATTCGAAAAATGGAAAGTGGGTGAACCAGGCAGCAGAGGATGCACACAAGGGTCTCAACCACTCATTGGACCTCTCATATGTGAGACGGTTTTGGGTAAATGGCCTGGCC
ACGTTAAAGGCATGGGATTGGGGACCTAAGCCATCTCGTTCAAGCACGAGTGGGAGTACATCAGTCAATTCGGGACCCACGCAGAGGGAGCTTGAACAACAAGAAGAGAT
TAACACCCTGAAGGCCAAATTTAAGGAGCAAGGAGAGTCATCCACTTGTCTAGGTCAACCTAATTCAAGCTTGTCTTCACTCTATAAAAGGGAAGAGTCGCCCAAGTCAA
ATTCATTCCTTTCTGGGGAGGAACATTCCACTCTTGGAAAGTTCATTTCCACTTTTGGAAGCCGAATAGAGGAAGAAGATTAG
mRNA sequenceShow/hide mRNA sequence
ATGATCTGTCCATTAGGTCCCACCGGTAGCTCATTTAGGGCGTTGAGCGGGAAAAAGGAAGAAAATGCTGCTGTTTTTCTGCGATCTCTAGGAGAAAAGGCGATACCGAT
CAAGAATTTCTACAAGGGTAAGTGGTTTCTTAAAATTTTACTTGTGTTTGAATTGCAGAAAGAGAAGGAGGGTCGAGACATAGATCCCATTGAACTATTTGAACTGACCC
ATTCGAAAAATGGAAAGTGGGTGAACCAGGCAGCAGAGGATGCACACAAGGGTCTCAACCACTCATTGGACCTCTCATATGTGAGACGGTTTTGGGTAAATGGCCTGGCC
ACGTTAAAGGCATGGGATTGGGGACCTAAGCCATCTCGTTCAAGCACGAGTGGGAGTACATCAGTCAATTCGGGACCCACGCAGAGGGAGCTTGAACAACAAGAAGAGAT
TAACACCCTGAAGGCCAAATTTAAGGAGCAAGGAGAGTCATCCACTTGTCTAGGTCAACCTAATTCAAGCTTGTCTTCACTCTATAAAAGGGAAGAGTCGCCCAAGTCAA
ATTCATTCCTTTCTGGGGAGGAACATTCCACTCTTGGAAAGTTCATTTCCACTTTTGGAAGCCGAATAGAGGAAGAAGATTAG
Protein sequenceShow/hide protein sequence
MICPLGPTGSSFRALSGKKEENAAVFLRSLGEKAIPIKNFYKGKWFLKILLVFELQKEKEGRDIDPIELFELTHSKNGKWVNQAAEDAHKGLNHSLDLSYVRRFWVNGLA
TLKAWDWGPKPSRSSTSGSTSVNSGPTQRELEQQEEINTLKAKFKEQGESSTCLGQPNSSLSSLYKREESPKSNSFLSGEEHSTLGKFISTFGSRIEEED