CuGenDBv2

Gene ID	Spg028200
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	serine/arginine-rich splicing factor 11
Genome location	scaffold2:46099105..46102317
RNA-Seq Expression	Spg028200
Synteny	Spg028200
Gene Ontology terms	GO:0016853 - isomerase activity (molecular function)
InterPro domains	NA

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

XP_008450603.1 PREDICTED: peptidyl-prolyl cis-trans isomerase G [Cucumis melo]

4.9e-60

80.98

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Query:  MAASSSSATSYTSDSSSSSSRRRRRRRSRRDKDRDALRIRKKSRSHSKRRRRHRRSSSDSLSSSDSESDYSRSDSSSQSEPETSGRSKRNKKNDRTKKDK
        MAASSS+ TS +SDSSSSSSRRRRRRR+RR+KDRD LRIRKKSRSHSKR RRHRRSSSDSLSSSDSESDY+RS+SSS+SEPETS RSKR+KKNDRTKKDK
Subjt:  MAASSSSATSYTSDSSSSSSRRRRRRRSRRDKDRDALRIRKKSRSHSKRRRRHRRSSSDSLSSSDSESDYSRSDSSSQSEPETSGRSKRNKKNDRTKKDK

Query:  ERERSRSHHHKKRKHKAKEVDHLPVWKQPEERSSSPVQLSKFLAREKDDGARRSAVSGKKVKDPPLSCFCLYLEMILLKLDKSKEDKAEESKRNELLKFL
        ERERSRSHHHK+RKHKAKE       KQPEE SSSPVQLSKFLAREKDDG RRSAVSGKK               ILLKLDKSKEDKAEE+KRNELLKFL
Subjt:  ERERSRSHHHKKRKHKAKEVDHLPVWKQPEERSSSPVQLSKFLAREKDDGARRSAVSGKKVKDPPLSCFCLYLEMILLKLDKSKEDKAEESKRNELLKFL

Query:  NSSFD
        NSSFD
Subjt:  NSSFD

XP_011659818.1 NKAP family protein isoform X2 [Cucumis sativus]

3.5e-58

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Query:  MAASSSSATSYTSDSSSSSSRRRRRRRSRRDKDRDALRIRKKSRSHSKRRRRHRRSSSDSLSSSDSESDYSRSDSSSQSEPETSGRSKRNKKNDRTKKDK
        MAA+SS+ATS +SDSSSSSSRRRRRR++RRDKDRD LRIRKKSRSHSKR RRHRRSSSDSLSS+DSESDYSR   SS+SEPETS RSKR+KKNDRTKKDK
Subjt:  MAASSSSATSYTSDSSSSSSRRRRRRRSRRDKDRDALRIRKKSRSHSKRRRRHRRSSSDSLSSSDSESDYSRSDSSSQSEPETSGRSKRNKKNDRTKKDK

Query:  ERERSRSHHHKKRKHKAKEVDHLPVWKQPEERSSSPVQLSKFLAREKDDGARRSAVSGKKVKDPPLSCFCLYLEMILLKLDKSKEDKAEESKRNELLKFL
        ERERSRSHHHK+RKHKAKE       KQPEE SSSPVQLSKFLAREKDDG RRSAVSGKK               ILLKLDKSKEDKAEE+KRNELLKFL
Subjt:  ERERSRSHHHKKRKHKAKEVDHLPVWKQPEERSSSPVQLSKFLAREKDDGARRSAVSGKKVKDPPLSCFCLYLEMILLKLDKSKEDKAEESKRNELLKFL

Query:  NSSFD
        NSSFD
Subjt:  NSSFD

XP_022136184.1 serine/arginine-rich splicing factor 11 [Momordica charantia]

2.0e-66

85.85

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Query:  MAASSSSATSYTSDSSSSSSRRRRRRRSRRDKDRDALRIRKKSRSHSKRRRRHRRSSSDSLSSSDSESDYSRSDSSSQSEPETSGRSKRNKKNDRTKKDK
        MAASSSSATS+TSDSSSSSSRRRRRRRSRRDKDRDALRIRKKSRSHSKRRRRHRRSSSDSLSSSDSES+YSRS SSSQSEPETSGRSKR+KKNDRTKKDK
Subjt:  MAASSSSATSYTSDSSSSSSRRRRRRRSRRDKDRDALRIRKKSRSHSKRRRRHRRSSSDSLSSSDSESDYSRSDSSSQSEPETSGRSKRNKKNDRTKKDK

Query:  ERERSRSHHHKKRKHKAKEVDHLPVWKQPEERSSSPVQLSKFLAREKDDGARRSAVSGKKVKDPPLSCFCLYLEMILLKLDKSKEDKAEESKRNELLKFL
        ERERS+SHHHK+RKHKAKE       KQPEERSSSPVQLSKFLAREKDDGARRSAVSGKK               ILLKLDKSKEDKAEE+KRNELLKFL
Subjt:  ERERSRSHHHKKRKHKAKEVDHLPVWKQPEERSSSPVQLSKFLAREKDDGARRSAVSGKKVKDPPLSCFCLYLEMILLKLDKSKEDKAEESKRNELLKFL

Query:  NSSFD
        NSSFD
Subjt:  NSSFD

XP_031738322.1 NKAP family protein isoform X1 [Cucumis sativus]

1.2e-58

80.49

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Query:  MAASSSSATSYTSDSSSSSSRRRRRRRSRRDKDRDALRIRKKSRSHSKRRRRHRRSSSDSLSSSDSESDYSRSDSSSQSEPETSGRSKRNKKNDRTKKDK
        MAA+SS+ATS +SDSSSSSSRRRRRR++RRDKDRD LRIRKKSRSHSKR RRHRRSSSDSLSS+DSESDYSR +SSS+SEPETS RSKR+KKNDRTKKDK
Subjt:  MAASSSSATSYTSDSSSSSSRRRRRRRSRRDKDRDALRIRKKSRSHSKRRRRHRRSSSDSLSSSDSESDYSRSDSSSQSEPETSGRSKRNKKNDRTKKDK

Query:  ERERSRSHHHKKRKHKAKEVDHLPVWKQPEERSSSPVQLSKFLAREKDDGARRSAVSGKKVKDPPLSCFCLYLEMILLKLDKSKEDKAEESKRNELLKFL
        ERERSRSHHHK+RKHKAKE       KQPEE SSSPVQLSKFLAREKDDG RRSAVSGKK               ILLKLDKSKEDKAEE+KRNELLKFL
Subjt:  ERERSRSHHHKKRKHKAKEVDHLPVWKQPEERSSSPVQLSKFLAREKDDGARRSAVSGKKVKDPPLSCFCLYLEMILLKLDKSKEDKAEESKRNELLKFL

Query:  NSSFD
        NSSFD
Subjt:  NSSFD

XP_038879353.1 NKAP family protein [Benincasa hispida]

5.2e-62

81.95

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Query:  MAASSSSATSYTSDSSSSSSRRRRRRRSRRDKDRDALRIRKKSRSHSKRRRRHRRSSSDSLSSSDSESDYSRSDSSSQSEPETSGRSKRNKKNDRTKKDK
        MAASSSSATSYTSDSSSSSSRRRRRRR+RR+KDRD LR+RKKSRSHSKR RRHRRSSSDSLSSSDSESDYSR++SSSQSEPETSGRSKR+K+NDR K+DK
Subjt:  MAASSSSATSYTSDSSSSSSRRRRRRRSRRDKDRDALRIRKKSRSHSKRRRRHRRSSSDSLSSSDSESDYSRSDSSSQSEPETSGRSKRNKKNDRTKKDK

Query:  ERERSRSHHHKKRKHKAKEVDHLPVWKQPEERSSSPVQLSKFLAREKDDGARRSAVSGKKVKDPPLSCFCLYLEMILLKLDKSKEDKAEESKRNELLKFL
        ERERSRSHHHK+RKHKAKE       KQPEE SSSPVQLSKFLAREKDDG RRSAVSGKK               ILLKLDKSKEDKAEE+KRNELLKFL
Subjt:  ERERSRSHHHKKRKHKAKEVDHLPVWKQPEERSSSPVQLSKFLAREKDDGARRSAVSGKKVKDPPLSCFCLYLEMILLKLDKSKEDKAEESKRNELLKFL

Query:  NSSFD
        NSSFD
Subjt:  NSSFD

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LVZ3 Uncharacterized protein

1.7e-58

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Query:  MAASSSSATSYTSDSSSSSSRRRRRRRSRRDKDRDALRIRKKSRSHSKRRRRHRRSSSDSLSSSDSESDYSRSDSSSQSEPETSGRSKRNKKNDRTKKDK
        MAA+SS+ATS +SDSSSSSSRRRRRR++RRDKDRD LRIRKKSRSHSKR RRHRRSSSDSLSS+DSESDYSR   SS+SEPETS RSKR+KKNDRTKKDK
Subjt:  MAASSSSATSYTSDSSSSSSRRRRRRRSRRDKDRDALRIRKKSRSHSKRRRRHRRSSSDSLSSSDSESDYSRSDSSSQSEPETSGRSKRNKKNDRTKKDK

Query:  ERERSRSHHHKKRKHKAKEVDHLPVWKQPEERSSSPVQLSKFLAREKDDGARRSAVSGKKVKDPPLSCFCLYLEMILLKLDKSKEDKAEESKRNELLKFL
        ERERSRSHHHK+RKHKAKE       KQPEE SSSPVQLSKFLAREKDDG RRSAVSGKK               ILLKLDKSKEDKAEE+KRNELLKFL
Subjt:  ERERSRSHHHKKRKHKAKEVDHLPVWKQPEERSSSPVQLSKFLAREKDDGARRSAVSGKKVKDPPLSCFCLYLEMILLKLDKSKEDKAEESKRNELLKFL

Query:  NSSFD
        NSSFD
Subjt:  NSSFD

A0A1S3BQ85 peptidyl-prolyl cis-trans isomerase G

2.4e-60

80.98

Show/hide

Query:  MAASSSSATSYTSDSSSSSSRRRRRRRSRRDKDRDALRIRKKSRSHSKRRRRHRRSSSDSLSSSDSESDYSRSDSSSQSEPETSGRSKRNKKNDRTKKDK
        MAASSS+ TS +SDSSSSSSRRRRRRR+RR+KDRD LRIRKKSRSHSKR RRHRRSSSDSLSSSDSESDY+RS+SSS+SEPETS RSKR+KKNDRTKKDK
Subjt:  MAASSSSATSYTSDSSSSSSRRRRRRRSRRDKDRDALRIRKKSRSHSKRRRRHRRSSSDSLSSSDSESDYSRSDSSSQSEPETSGRSKRNKKNDRTKKDK

Query:  ERERSRSHHHKKRKHKAKEVDHLPVWKQPEERSSSPVQLSKFLAREKDDGARRSAVSGKKVKDPPLSCFCLYLEMILLKLDKSKEDKAEESKRNELLKFL
        ERERSRSHHHK+RKHKAKE       KQPEE SSSPVQLSKFLAREKDDG RRSAVSGKK               ILLKLDKSKEDKAEE+KRNELLKFL
Subjt:  ERERSRSHHHKKRKHKAKEVDHLPVWKQPEERSSSPVQLSKFLAREKDDGARRSAVSGKKVKDPPLSCFCLYLEMILLKLDKSKEDKAEESKRNELLKFL

Query:  NSSFD
        NSSFD
Subjt:  NSSFD

A0A6J1C3K8 serine/arginine-rich splicing factor 11

9.9e-67

85.85

Show/hide

Query:  MAASSSSATSYTSDSSSSSSRRRRRRRSRRDKDRDALRIRKKSRSHSKRRRRHRRSSSDSLSSSDSESDYSRSDSSSQSEPETSGRSKRNKKNDRTKKDK
        MAASSSSATS+TSDSSSSSSRRRRRRRSRRDKDRDALRIRKKSRSHSKRRRRHRRSSSDSLSSSDSES+YSRS SSSQSEPETSGRSKR+KKNDRTKKDK
Subjt:  MAASSSSATSYTSDSSSSSSRRRRRRRSRRDKDRDALRIRKKSRSHSKRRRRHRRSSSDSLSSSDSESDYSRSDSSSQSEPETSGRSKRNKKNDRTKKDK

Query:  ERERSRSHHHKKRKHKAKEVDHLPVWKQPEERSSSPVQLSKFLAREKDDGARRSAVSGKKVKDPPLSCFCLYLEMILLKLDKSKEDKAEESKRNELLKFL
        ERERS+SHHHK+RKHKAKE       KQPEERSSSPVQLSKFLAREKDDGARRSAVSGKK               ILLKLDKSKEDKAEE+KRNELLKFL
Subjt:  ERERSRSHHHKKRKHKAKEVDHLPVWKQPEERSSSPVQLSKFLAREKDDGARRSAVSGKKVKDPPLSCFCLYLEMILLKLDKSKEDKAEESKRNELLKFL

Query:  NSSFD
        NSSFD
Subjt:  NSSFD

A0A6J1HZG5 probable splicing factor, arginine/serine-rich 7 isoform X1

4.9e-58

80.98

Show/hide

Query:  MAASSSSATSYTSDSSSSSSRRRRRRRSRRDKDRDALRIRKKSRSHSKRRRRHRRSSSDSLSSSDSESDYSRSDSSSQSEPETSGRSKRNKKNDRTKKDK
        MAASSSSA+ YTSDSSSSSSRRRRRRR+RR+KDRDALRIRKKSRSHSKRRRRHRRSSS+SLSSSDSESDYSRS SSSQSEPE SGRSKR+KKND TK  K
Subjt:  MAASSSSATSYTSDSSSSSSRRRRRRRSRRDKDRDALRIRKKSRSHSKRRRRHRRSSSDSLSSSDSESDYSRSDSSSQSEPETSGRSKRNKKNDRTKKDK

Query:  ERERSRSHHHKKRKHKAKEVDHLPVWKQPEERSSSPVQLSKFLAREKDDGARRSAVSGKKVKDPPLSCFCLYLEMILLKLDKSKEDKAEESKRNELLKFL
        ERERS+S HHK+RKHKAKE       KQPEERSSSPVQLSKFLARE DDG RRSAVSGKK               ILLKLDKSKEDKAEE+KRNELLKFL
Subjt:  ERERSRSHHHKKRKHKAKEVDHLPVWKQPEERSSSPVQLSKFLAREKDDGARRSAVSGKKVKDPPLSCFCLYLEMILLKLDKSKEDKAEESKRNELLKFL

Query:  NSSFD
        NSSFD
Subjt:  NSSFD

A0A6J1I4D4 NKAP family protein isoform X2

1.9e-57

80.49

Show/hide

Query:  MAASSSSATSYTSDSSSSSSRRRRRRRSRRDKDRDALRIRKKSRSHSKRRRRHRRSSSDSLSSSDSESDYSRSDSSSQSEPETSGRSKRNKKNDRTKKDK
        MAASSSSA+ YTSDSSSSSSRRRRRRR+RR+KDRDALRIRKKSRSHSKRRRRHRRSSS+SLSSSDSESDYSRS SSSQSEPE SGRSKR+KKND TKK  
Subjt:  MAASSSSATSYTSDSSSSSSRRRRRRRSRRDKDRDALRIRKKSRSHSKRRRRHRRSSSDSLSSSDSESDYSRSDSSSQSEPETSGRSKRNKKNDRTKKDK

Query:  ERERSRSHHHKKRKHKAKEVDHLPVWKQPEERSSSPVQLSKFLAREKDDGARRSAVSGKKVKDPPLSCFCLYLEMILLKLDKSKEDKAEESKRNELLKFL
         RERS+S HHK+RKHKAKE       KQPEERSSSPVQLSKFLARE DDG RRSAVSGKK               ILLKLDKSKEDKAEE+KRNELLKFL
Subjt:  ERERSRSHHHKKRKHKAKEVDHLPVWKQPEERSSSPVQLSKFLAREKDDGARRSAVSGKKVKDPPLSCFCLYLEMILLKLDKSKEDKAEESKRNELLKFL

Query:  NSSFD
        NSSFD
Subjt:  NSSFD

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT5G27860.1 unknown protein

6.6e-31

55.56

Show/hide

Query:  MAASSSSATSYTSDSSSSSSRRR--RRRRSRRDKDRDALRIRKKSRSHSKRRRRHRRSSSDSLSSSDSESDYSRSDSSSQSEPETSGRSKRNKKNDRTKK
        MAASSSS++S  S  SS S RRR  RR   R D+DRD+L++RKKSRS SK+RRR R+ SSDS       SD S SDSSS+S      +S+R+KK+++ KK
Subjt:  MAASSSSATSYTSDSSSSSSRRR--RRRRSRRDKDRDALRIRKKSRSHSKRRRRHRRSSSDSLSSSDSESDYSRSDSSSQSEPETSGRSKRNKKNDRTKK

Query:  DKERERSRSHHHKKRKHKAKEVDHLPVWKQPEERSSSPVQLSKFLAREKDDGARRSAVSGKKVKDPPLSCFCLYLEMILLKLDKSKEDKAEESKRNELLK
         K++ERS+SH HK+ K++ ++       K   E SS PV+LSKFL R+KDDG RRSAVSGKK               ILLK+DKSKEDKA ESKRNELLK
Subjt:  DKERERSRSHHHKKRKHKAKEVDHLPVWKQPEERSSSPVQLSKFLAREKDDGARRSAVSGKKVKDPPLSCFCLYLEMILLKLDKSKEDKAEESKRNELLK

Query:  FLNSSFD
        FLN+SFD
Subjt:  FLNSSFD

AT5G27860.2 unknown protein

6.6e-31

55.56

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Query:  MAASSSSATSYTSDSSSSSSRRR--RRRRSRRDKDRDALRIRKKSRSHSKRRRRHRRSSSDSLSSSDSESDYSRSDSSSQSEPETSGRSKRNKKNDRTKK
        MAASSSS++S  S  SS S RRR  RR   R D+DRD+L++RKKSRS SK+RRR R+ SSDS       SD S SDSSS+S      +S+R+KK+++ KK
Subjt:  MAASSSSATSYTSDSSSSSSRRR--RRRRSRRDKDRDALRIRKKSRSHSKRRRRHRRSSSDSLSSSDSESDYSRSDSSSQSEPETSGRSKRNKKNDRTKK

Query:  DKERERSRSHHHKKRKHKAKEVDHLPVWKQPEERSSSPVQLSKFLAREKDDGARRSAVSGKKVKDPPLSCFCLYLEMILLKLDKSKEDKAEESKRNELLK
         K++ERS+SH HK+ K++ ++       K   E SS PV+LSKFL R+KDDG RRSAVSGKK               ILLK+DKSKEDKA ESKRNELLK
Subjt:  DKERERSRSHHHKKRKHKAKEVDHLPVWKQPEERSSSPVQLSKFLAREKDDGARRSAVSGKKVKDPPLSCFCLYLEMILLKLDKSKEDKAEESKRNELLK

Query:  FLNSSFD
        FLN+SFD
Subjt:  FLNSSFD

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGGCGGCCTCGTCTTCGTCGGCGACATCCTACACTTCCGATTCATCGTCTTCTTCTTCTCGACGTCGCCGTCGCCGGAGAAGTCGCCGTGACAAAGATCGTGACGCCCT
TAGGATTCGCAAGAAGAGTCGCTCTCATTCTAAACGCCGTCGCAGGCATCGCCGCTCCTCCTCCGATTCTCTCTCTTCCTCCGACTCCGAATCCGATTACTCCAGAAGCG
ATAGCTCTTCTCAAAGCGAGCCCGAAACGTCGGGTCGTTCAAAGCGGAATAAGAAGAATGATAGAACGAAGAAGGATAAGGAGAGGGAGCGAAGTAGGAGTCATCACCAT
AAAAAGCGTAAACATAAAGCTAAAGAGGTAGATCACTTGCCTGTTTGGAAACAGCCAGAAGAGAGAAGTAGCAGCCCTGTGCAGCTGTCTAAGTTTTTAGCGCGGGAGAA
GGATGATGGTGCTCGGAGGAGTGCTGTCTCTGGCAAAAAGGTGAAAGATCCGCCTCTTAGTTGCTTTTGCCTATATTTGGAAATGATATTGTTAAAACTTGATAAATCCA
AGGAAGACAAAGCTGAGGAAAGCAAAAGAAATGAATTGCTGAAATTCTTGAACTCTAGCTTTGACTAA

mRNA sequence

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Protein sequence

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MAASSSSATSYTSDSSSSSSRRRRRRRSRRDKDRDALRIRKKSRSHSKRRRRHRRSSSDSLSSSDSESDYSRSDSSSQSEPETSGRSKRNKKNDRTKKDKERERSRSHHH
KKRKHKAKEVDHLPVWKQPEERSSSPVQLSKFLAREKDDGARRSAVSGKKVKDPPLSCFCLYLEMILLKLDKSKEDKAEESKRNELLKFLNSSFD

Spg028200 (gene) of Sponge gourd (cylindrica) v1 genome