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Spg028230 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg028230
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionTransposon TX1 uncharacterized 149 kDa protein
Genome locationscaffold2:45341996..45343907
RNA-Seq ExpressionSpg028230
SyntenySpg028230
Gene Ontology termsGO:0009987 - cellular process (biological process)
GO:0110165 - cellular anatomical structure (cellular component)
GO:0005488 - binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8648339.1 hypothetical protein Csa_023126 [Cucumis sativus]2.7e-1250.72Show/hide
Query:  LRKLDRVTSDHYPLCLTLGNQRWGPPPYRFVNAWLSHSSFPLTVEAWWKTNPLTGWPGHGFIQKLKGLK
        + +LD V  DH+PL +T G+  WGP P++F N+WLS  SF   VE WW  N + GWP HG + KLK LK
Subjt:  LRKLDRVTSDHYPLCLTLGNQRWGPPPYRFVNAWLSHSSFPLTVEAWWKTNPLTGWPGHGFIQKLKGLK

RVW28221.1 hypothetical protein CK203_083720 [Vitis vinifera]2.7e-1242.86Show/hide
Query:  EAVLRKLDRVTSDHYPLCLTLGNQRWGPPPYRFVNAWLSHSSFPLTVEAWWKTNPLTGWPGHGFIQKLKGLKKELKQ
        +++   L R TSDH P+CL     +WGP P+RF N WL H  F      WW+   + GW GH F++KLK +K +LK+
Subjt:  EAVLRKLDRVTSDHYPLCLTLGNQRWGPPPYRFVNAWLSHSSFPLTVEAWWKTNPLTGWPGHGFIQKLKGLKKELKQ

RVW93496.1 hypothetical protein CK203_035058 [Vitis vinifera]2.0e-1245.95Show/hide
Query:  VLRKLDRVTSDHYPLCLTLGNQRWGPPPYRFVNAWLSHSSFPLTVEAWWKTNPLTGWPGHGFIQKLKGLKKELK
        +L  L R TSDH P+CL   + +WGP P+RF N WL H  F      WW+   + GW GH F++KLK +K +LK
Subjt:  VLRKLDRVTSDHYPLCLTLGNQRWGPPPYRFVNAWLSHSSFPLTVEAWWKTNPLTGWPGHGFIQKLKGLKKELK

XP_022158956.1 uncharacterized protein LOC111025405 [Momordica charantia]1.2e-1548.65Show/hide
Query:  VLRKLDRVTSDHYPLCLTLGNQRWGPPPYRFVNAWLSHSSFPLTVEAWWKTNPLTGWPGHGFIQKLKGLKKELK
        + +++ R TSDH+P+ L  G   WG  P+RF N WLSH +F   +E WW   PL GWPGHG + KLK LK  +K
Subjt:  VLRKLDRVTSDHYPLCLTLGNQRWGPPPYRFVNAWLSHSSFPLTVEAWWKTNPLTGWPGHGFIQKLKGLKKELK

XP_028081929.1 uncharacterized protein LOC114283306 [Camellia sinensis]1.2e-1249.38Show/hide
Query:  IEVIEAVLRKLDRVTSDHYPLCLTLGNQRWGPPPYRFVNAWLSHSSFPLTVEAWWKTNPLTGWPGHGFIQKLKGLKKELKQ
        +E     L  L RV SDH PL L    + WGP P+RF+NAW  HS+F   VE WW    + GW G    QKLKGLK  LKQ
Subjt:  IEVIEAVLRKLDRVTSDHYPLCLTLGNQRWGPPPYRFVNAWLSHSSFPLTVEAWWKTNPLTGWPGHGFIQKLKGLKKELKQ

TrEMBL top hitse value%identityAlignment
A0A0A0KMS2 Uncharacterized protein1.3e-1250.72Show/hide
Query:  LRKLDRVTSDHYPLCLTLGNQRWGPPPYRFVNAWLSHSSFPLTVEAWWKTNPLTGWPGHGFIQKLKGLK
        + +LD V  DH+PL +T G+  WGP P++F N+WLS  SF   VE WW  N + GWP HG + KLK LK
Subjt:  LRKLDRVTSDHYPLCLTLGNQRWGPPPYRFVNAWLSHSSFPLTVEAWWKTNPLTGWPGHGFIQKLKGLK

A0A438CYG1 Uncharacterized protein1.3e-1242.86Show/hide
Query:  EAVLRKLDRVTSDHYPLCLTLGNQRWGPPPYRFVNAWLSHSSFPLTVEAWWKTNPLTGWPGHGFIQKLKGLKKELKQ
        +++   L R TSDH P+CL     +WGP P+RF N WL H  F      WW+   + GW GH F++KLK +K +LK+
Subjt:  EAVLRKLDRVTSDHYPLCLTLGNQRWGPPPYRFVNAWLSHSSFPLTVEAWWKTNPLTGWPGHGFIQKLKGLKKELKQ

A0A438I9V4 Uncharacterized protein9.8e-1345.95Show/hide
Query:  VLRKLDRVTSDHYPLCLTLGNQRWGPPPYRFVNAWLSHSSFPLTVEAWWKTNPLTGWPGHGFIQKLKGLKKELK
        +L  L R TSDH P+CL   + +WGP P+RF N WL H  F      WW+   + GW GH F++KLK +K +LK
Subjt:  VLRKLDRVTSDHYPLCLTLGNQRWGPPPYRFVNAWLSHSSFPLTVEAWWKTNPLTGWPGHGFIQKLKGLKKELK

A0A438JFG5 Uncharacterized protein1.7e-1246.58Show/hide
Query:  RKLDRVTSDHYPLCLTLGNQRWGPPPYRFVNAWLSHSSFPLTVEAWWKTNPLTGWPGHGFIQKLKGLKKELKQ
        R L R TSDH P+CL     +WGP P+RF N WL H  F      WW+   + GW GH F++KLK +K +LK+
Subjt:  RKLDRVTSDHYPLCLTLGNQRWGPPPYRFVNAWLSHSSFPLTVEAWWKTNPLTGWPGHGFIQKLKGLKKELKQ

A0A6J1E2G6 uncharacterized protein LOC1110254055.6e-1648.65Show/hide
Query:  VLRKLDRVTSDHYPLCLTLGNQRWGPPPYRFVNAWLSHSSFPLTVEAWWKTNPLTGWPGHGFIQKLKGLKKELK
        + +++ R TSDH+P+ L  G   WG  P+RF N WLSH +F   +E WW   PL GWPGHG + KLK LK  +K
Subjt:  VLRKLDRVTSDHYPLCLTLGNQRWGPPPYRFVNAWLSHSSFPLTVEAWWKTNPLTGWPGHGFIQKLKGLKKELK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATATGATGGAGATAGGAATCAAAGTCAAGGAAAATCCTTTAGGTTTTCTTCCAGCCATTGTTCACCTCCTCTCAGCCTCCAACAGTCCCATCTCTGTATCCATTGA
CCCTTTTTTCATGGAGGAGTACAACATTGGCTACGTTGCCGGAATCCATGGCAAAATACCATCTTCTACGATGACTTCTGGTAACCCACGCGTTGAGGATAGAAAATCCG
ACGAGGTTAGTGAAAGTTTCCACAACACACGCGCCACCAACGTGACTGATGTAACAAATACGGAAAAAGAACAGTCTCTGTACCGAAGTGATTTTCCACAGGCCCCCAGT
GCCTCTTATAGAAGACCCTATCCCCTTGCAAATCGAAGAGCCTCATATGCAGAGGACAACAAAATTGACCTAGCTGTTTACCTCCCCATGATCTTTCCATGGTTGACTGA
ACATGGCGCATCCGAGGGTATTGCCATTCTATGGAATGAATCCACCTTCATTGTTATAGAGGTTATCGAAGCTGTGCTTCGCAAACTGGATAGAGTCACTTCAGATCACT
ATCCGCTTTGCCTCACTTTAGGGAATCAACGATGGGGTCCTCCTCCATACAGATTTGTCAATGCCTGGCTGTCTCATTCCTCCTTCCCTCTTACTGTCGAGGCATGGTGG
AAGACAAATCCCTTGACTGGATGGCCCGGACATGGATTTATTCAAAAGCTCAAAGGTCTTAAAAAGGAGCTGAAGCAATGA
mRNA sequenceShow/hide mRNA sequence
ATGGATATGATGGAGATAGGAATCAAAGTCAAGGAAAATCCTTTAGGTTTTCTTCCAGCCATTGTTCACCTCCTCTCAGCCTCCAACAGTCCCATCTCTGTATCCATTGA
CCCTTTTTTCATGGAGGAGTACAACATTGGCTACGTTGCCGGAATCCATGGCAAAATACCATCTTCTACGATGACTTCTGGTAACCCACGCGTTGAGGATAGAAAATCCG
ACGAGGTTAGTGAAAGTTTCCACAACACACGCGCCACCAACGTGACTGATGTAACAAATACGGAAAAAGAACAGTCTCTGTACCGAAGTGATTTTCCACAGGCCCCCAGT
GCCTCTTATAGAAGACCCTATCCCCTTGCAAATCGAAGAGCCTCATATGCAGAGGACAACAAAATTGACCTAGCTGTTTACCTCCCCATGATCTTTCCATGGTTGACTGA
ACATGGCGCATCCGAGGGTATTGCCATTCTATGGAATGAATCCACCTTCATTGTTATAGAGGTTATCGAAGCTGTGCTTCGCAAACTGGATAGAGTCACTTCAGATCACT
ATCCGCTTTGCCTCACTTTAGGGAATCAACGATGGGGTCCTCCTCCATACAGATTTGTCAATGCCTGGCTGTCTCATTCCTCCTTCCCTCTTACTGTCGAGGCATGGTGG
AAGACAAATCCCTTGACTGGATGGCCCGGACATGGATTTATTCAAAAGCTCAAAGGTCTTAAAAAGGAGCTGAAGCAATGA
Protein sequenceShow/hide protein sequence
MDMMEIGIKVKENPLGFLPAIVHLLSASNSPISVSIDPFFMEEYNIGYVAGIHGKIPSSTMTSGNPRVEDRKSDEVSESFHNTRATNVTDVTNTEKEQSLYRSDFPQAPS
ASYRRPYPLANRRASYAEDNKIDLAVYLPMIFPWLTEHGASEGIAILWNESTFIVIEVIEAVLRKLDRVTSDHYPLCLTLGNQRWGPPPYRFVNAWLSHSSFPLTVEAWW
KTNPLTGWPGHGFIQKLKGLKKELKQ