; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg028241 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg028241
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionMalignant T-cell-amplified sequence 1-like protein
Genome locationscaffold2:45335269..45339921
RNA-Seq ExpressionSpg028241
SyntenySpg028241
Gene Ontology termsGO:0001731 - formation of translation preinitiation complex (biological process)
GO:0005737 - cytoplasm (cellular component)
GO:0003723 - RNA binding (molecular function)
InterPro domainsIPR002478 - PUA domain
IPR004521 - Uncharacterised domain CHP00451
IPR015947 - PUA-like superfamily
IPR016437 - MCT-1/Tma20


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0050916.1 malignant T-cell-amplified sequence 1-like protein [Cucumis melo var. makuwa]1.4e-4595.88Show/hide
Query:  VEDPNIMKKLQVDRGAIKFVLAGANIMCPGLTSPGGALDDEVEAETPVAIMAEGKQHALAIGFTKMSAKEIRATNKGIGVDNMHYLNDGLWKMERLD
        + DPNIM+KLQVDRGAIKFVLAGANIMCPGLTSPGG LDDEVEAETPVAIMAEGKQHALAIGFTKMSAKEIRATNKGIGVDNMHYLNDGLWKMERLD
Subjt:  VEDPNIMKKLQVDRGAIKFVLAGANIMCPGLTSPGGALDDEVEAETPVAIMAEGKQHALAIGFTKMSAKEIRATNKGIGVDNMHYLNDGLWKMERLD

XP_011659846.1 malignant T-cell-amplified sequence 1 homolog [Cucumis sativus]4.0e-4598.94Show/hide
Query:  PNIMKKLQVDRGAIKFVLAGANIMCPGLTSPGGALDDEVEAETPVAIMAEGKQHALAIGFTKMSAKEIRATNKGIGVDNMHYLNDGLWKMERLD
        PNIMKKLQVDRGAIKFVLAGANIMCPGLTSPGG LDDEVEAETPVAIMAEGKQHALAIGFTKMSAKEIRATNKGIGVDNMHYLNDGLWKMERLD
Subjt:  PNIMKKLQVDRGAIKFVLAGANIMCPGLTSPGGALDDEVEAETPVAIMAEGKQHALAIGFTKMSAKEIRATNKGIGVDNMHYLNDGLWKMERLD

XP_022135845.1 malignant T-cell-amplified sequence 1 homolog [Momordica charantia]3.0e-4598.94Show/hide
Query:  PNIMKKLQVDRGAIKFVLAGANIMCPGLTSPGGALDDEVEAETPVAIMAEGKQHALAIGFTKMSAKEIRATNKGIGVDNMHYLNDGLWKMERLD
        PNIMKKLQVDRGAIKFVLAGANIMCPGLTSPGGALDDEVEA+TPVAIMAEGKQHALAIGFTKMSAKEIRATNKGIGVDNMHYLNDGLWKMERLD
Subjt:  PNIMKKLQVDRGAIKFVLAGANIMCPGLTSPGGALDDEVEAETPVAIMAEGKQHALAIGFTKMSAKEIRATNKGIGVDNMHYLNDGLWKMERLD

XP_022961538.1 malignant T-cell-amplified sequence 1 homolog [Cucurbita moschata]3.0e-4598.94Show/hide
Query:  PNIMKKLQVDRGAIKFVLAGANIMCPGLTSPGGALDDEVEAETPVAIMAEGKQHALAIGFTKMSAKEIRATNKGIGVDNMHYLNDGLWKMERLD
        PNIMKKLQVDRGAIKFVLAGANIMCPGLTSPGGALDDEVEA+TPVAIMAEGKQHALAIGFTKMSAKEIRATNKGIGVDNMHYLNDGLWKMERLD
Subjt:  PNIMKKLQVDRGAIKFVLAGANIMCPGLTSPGGALDDEVEAETPVAIMAEGKQHALAIGFTKMSAKEIRATNKGIGVDNMHYLNDGLWKMERLD

XP_038887727.1 malignant T-cell-amplified sequence 1 homolog [Benincasa hispida]3.0e-4598.94Show/hide
Query:  PNIMKKLQVDRGAIKFVLAGANIMCPGLTSPGGALDDEVEAETPVAIMAEGKQHALAIGFTKMSAKEIRATNKGIGVDNMHYLNDGLWKMERLD
        PNIM+KLQVDRGAIKFVLAGANIMCPGLTSPGGALDDEVEAETPVAIMAEGKQHALAIGFTKMSAKEIRATNKGIGVDNMHYLNDGLWKMERLD
Subjt:  PNIMKKLQVDRGAIKFVLAGANIMCPGLTSPGGALDDEVEAETPVAIMAEGKQHALAIGFTKMSAKEIRATNKGIGVDNMHYLNDGLWKMERLD

TrEMBL top hitse value%identityAlignment
A0A0A0LYF6 PUA domain-containing protein1.9e-4598.94Show/hide
Query:  PNIMKKLQVDRGAIKFVLAGANIMCPGLTSPGGALDDEVEAETPVAIMAEGKQHALAIGFTKMSAKEIRATNKGIGVDNMHYLNDGLWKMERLD
        PNIMKKLQVDRGAIKFVLAGANIMCPGLTSPGG LDDEVEAETPVAIMAEGKQHALAIGFTKMSAKEIRATNKGIGVDNMHYLNDGLWKMERLD
Subjt:  PNIMKKLQVDRGAIKFVLAGANIMCPGLTSPGGALDDEVEAETPVAIMAEGKQHALAIGFTKMSAKEIRATNKGIGVDNMHYLNDGLWKMERLD

A0A1S3BPJ3 malignant T-cell-amplified sequence 1 homolog4.3e-4597.87Show/hide
Query:  PNIMKKLQVDRGAIKFVLAGANIMCPGLTSPGGALDDEVEAETPVAIMAEGKQHALAIGFTKMSAKEIRATNKGIGVDNMHYLNDGLWKMERLD
        PNIM+KLQVDRGAIKFVLAGANIMCPGLTSPGG LDDEVEAETPVAIMAEGKQHALAIGFTKMSAKEIRATNKGIGVDNMHYLNDGLWKMERLD
Subjt:  PNIMKKLQVDRGAIKFVLAGANIMCPGLTSPGGALDDEVEAETPVAIMAEGKQHALAIGFTKMSAKEIRATNKGIGVDNMHYLNDGLWKMERLD

A0A5A7U9P4 Malignant T-cell-amplified sequence 1-like protein6.6e-4695.88Show/hide
Query:  VEDPNIMKKLQVDRGAIKFVLAGANIMCPGLTSPGGALDDEVEAETPVAIMAEGKQHALAIGFTKMSAKEIRATNKGIGVDNMHYLNDGLWKMERLD
        + DPNIM+KLQVDRGAIKFVLAGANIMCPGLTSPGG LDDEVEAETPVAIMAEGKQHALAIGFTKMSAKEIRATNKGIGVDNMHYLNDGLWKMERLD
Subjt:  VEDPNIMKKLQVDRGAIKFVLAGANIMCPGLTSPGGALDDEVEAETPVAIMAEGKQHALAIGFTKMSAKEIRATNKGIGVDNMHYLNDGLWKMERLD

A0A6J1C273 malignant T-cell-amplified sequence 1 homolog1.5e-4598.94Show/hide
Query:  PNIMKKLQVDRGAIKFVLAGANIMCPGLTSPGGALDDEVEAETPVAIMAEGKQHALAIGFTKMSAKEIRATNKGIGVDNMHYLNDGLWKMERLD
        PNIMKKLQVDRGAIKFVLAGANIMCPGLTSPGGALDDEVEA+TPVAIMAEGKQHALAIGFTKMSAKEIRATNKGIGVDNMHYLNDGLWKMERLD
Subjt:  PNIMKKLQVDRGAIKFVLAGANIMCPGLTSPGGALDDEVEAETPVAIMAEGKQHALAIGFTKMSAKEIRATNKGIGVDNMHYLNDGLWKMERLD

A0A6J1HC33 malignant T-cell-amplified sequence 1 homolog1.5e-4598.94Show/hide
Query:  PNIMKKLQVDRGAIKFVLAGANIMCPGLTSPGGALDDEVEAETPVAIMAEGKQHALAIGFTKMSAKEIRATNKGIGVDNMHYLNDGLWKMERLD
        PNIMKKLQVDRGAIKFVLAGANIMCPGLTSPGGALDDEVEA+TPVAIMAEGKQHALAIGFTKMSAKEIRATNKGIGVDNMHYLNDGLWKMERLD
Subjt:  PNIMKKLQVDRGAIKFVLAGANIMCPGLTSPGGALDDEVEAETPVAIMAEGKQHALAIGFTKMSAKEIRATNKGIGVDNMHYLNDGLWKMERLD

SwissProt top hitse value%identityAlignment
Q2KIE4 Malignant T-cell-amplified sequence 12.3e-2765.93Show/hide
Query:  PNIMKKLQVDRGAIKFVLAGANIMCPGLTSPGGALDDEVEAETPVAIMAEGKQHALAIGFTKMSAKEIRATNKGIGVDNMHYLNDGLWKME
        P I+   QVD+GAIKFVL+GANIMCPGLTSPG  L      +T VAIMAEGKQHAL +G  KMSA++I   NKGIG++N+HYLNDGLW M+
Subjt:  PNIMKKLQVDRGAIKFVLAGANIMCPGLTSPGGALDDEVEAETPVAIMAEGKQHALAIGFTKMSAKEIRATNKGIGVDNMHYLNDGLWKME

Q5PPY1 Malignant T-cell-amplified sequence 1-A1.3e-2767.03Show/hide
Query:  PNIMKKLQVDRGAIKFVLAGANIMCPGLTSPGGALDDEVEAETPVAIMAEGKQHALAIGFTKMSAKEIRATNKGIGVDNMHYLNDGLWKME
        P I+   QVD+GAIKFVL+GANIMCPGLTSPG  L     A+T VAIMAEGKQHAL +G  KMSA +I   NKGIG++N+HYLNDGLW M+
Subjt:  PNIMKKLQVDRGAIKFVLAGANIMCPGLTSPGGALDDEVEAETPVAIMAEGKQHALAIGFTKMSAKEIRATNKGIGVDNMHYLNDGLWKME

Q6DER1 Malignant T-cell-amplified sequence 11.0e-2767.03Show/hide
Query:  PNIMKKLQVDRGAIKFVLAGANIMCPGLTSPGGALDDEVEAETPVAIMAEGKQHALAIGFTKMSAKEIRATNKGIGVDNMHYLNDGLWKME
        P I+   QVD+GAIKFVL+GANIMCPGLTSPG  L     A+T VAIMAEGKQHAL +G  KMSA +I   NKGIG++N+HYLNDGLW M+
Subjt:  PNIMKKLQVDRGAIKFVLAGANIMCPGLTSPGGALDDEVEAETPVAIMAEGKQHALAIGFTKMSAKEIRATNKGIGVDNMHYLNDGLWKME

Q6NRJ7 Malignant T-cell-amplified sequence 1-B4.6e-2868.13Show/hide
Query:  PNIMKKLQVDRGAIKFVLAGANIMCPGLTSPGGALDDEVEAETPVAIMAEGKQHALAIGFTKMSAKEIRATNKGIGVDNMHYLNDGLWKME
        P I+   QVD+GAIKFVL+GANIMCPGLTSPG  L     AET VAIMAEGKQHAL +G  KMSA +I   NKGIG++N+HYLNDGLW M+
Subjt:  PNIMKKLQVDRGAIKFVLAGANIMCPGLTSPGGALDDEVEAETPVAIMAEGKQHALAIGFTKMSAKEIRATNKGIGVDNMHYLNDGLWKME

Q7ZV34 Malignant T-cell-amplified sequence 12.3e-2765.93Show/hide
Query:  PNIMKKLQVDRGAIKFVLAGANIMCPGLTSPGGALDDEVEAETPVAIMAEGKQHALAIGFTKMSAKEIRATNKGIGVDNMHYLNDGLWKME
        P I+   QVD+GAIKFVL+GANIMCPGLTSPG  L    E++T VAIMAEGKQHAL +G  KMSA +I   N GIG++N+HYLNDGLW M+
Subjt:  PNIMKKLQVDRGAIKFVLAGANIMCPGLTSPGGALDDEVEAETPVAIMAEGKQHALAIGFTKMSAKEIRATNKGIGVDNMHYLNDGLWKME

Arabidopsis top hitse value%identityAlignment
AT1G09150.1 pseudouridine synthase and archaeosine transglycosylase (PUA) domain-containing protein3.6e-4488.3Show/hide
Query:  PNIMKKLQVDRGAIKFVLAGANIMCPGLTSPGGALDDEVEAETPVAIMAEGKQHALAIGFTKMSAKEIRATNKGIGVDNMHYLNDGLWKMERLD
        PNIMK+ QVDRGAIKFVL+GANIMCPGLTSPGG LD EVEAE PVAI AEGKQHALAIGFTKMSAK+I++ NKGIGVDNMHYLNDGLWKMERLD
Subjt:  PNIMKKLQVDRGAIKFVLAGANIMCPGLTSPGGALDDEVEAETPVAIMAEGKQHALAIGFTKMSAKEIRATNKGIGVDNMHYLNDGLWKMERLD


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAAAATCGTAAAGTGGCGGATGTCTTGTCTCATTCAGGGAGCTCCCCCTCGCTTTCTTTCGGGTTCCGTCGTGCTTTGTCCGATAGGGAATCGATGGAAGTCACCGC
TCTTCTTTCTTTGATTGGGGAGTTTGAGTTTAGGTGGGAGAGGAGAGAGATTCGTTGTTGGAGTCCTAGTCCTTTCGAGGGGTTTTTGTGTAGTTCCTACTTCAGTGCGC
TCTTGAATCCTCCTCCCATAGCGATTCCATTTTCTCTCTTTGTGGAAGATCCTAATATTATGAAGAAATTACAAGTAGACAGAGGTGCAATAAAGTTTGTCCTTGCTGGT
GCTAACATAATGTGTCCTGGTCTAACATCTCCTGGGGGTGCCTTGGATGATGAAGTCGAAGCGGAAACACCTGTGGCAATAATGGCAGAAGGGAAGCAACATGCTCTTGC
AATTGGCTTCACCAAGATGTCAGCAAAGGAAATAAGGGCGACAAACAAAGGGATTGGAGTGGACAATATGCATTACCTTAACGACGGTCTTTGGAAGATGGAACGACTCG
ATTGA
mRNA sequenceShow/hide mRNA sequence
ATGAAAAATCGTAAAGTGGCGGATGTCTTGTCTCATTCAGGGAGCTCCCCCTCGCTTTCTTTCGGGTTCCGTCGTGCTTTGTCCGATAGGGAATCGATGGAAGTCACCGC
TCTTCTTTCTTTGATTGGGGAGTTTGAGTTTAGGTGGGAGAGGAGAGAGATTCGTTGTTGGAGTCCTAGTCCTTTCGAGGGGTTTTTGTGTAGTTCCTACTTCAGTGCGC
TCTTGAATCCTCCTCCCATAGCGATTCCATTTTCTCTCTTTGTGGAAGATCCTAATATTATGAAGAAATTACAAGTAGACAGAGGTGCAATAAAGTTTGTCCTTGCTGGT
GCTAACATAATGTGTCCTGGTCTAACATCTCCTGGGGGTGCCTTGGATGATGAAGTCGAAGCGGAAACACCTGTGGCAATAATGGCAGAAGGGAAGCAACATGCTCTTGC
AATTGGCTTCACCAAGATGTCAGCAAAGGAAATAAGGGCGACAAACAAAGGGATTGGAGTGGACAATATGCATTACCTTAACGACGGTCTTTGGAAGATGGAACGACTCG
ATTGA
Protein sequenceShow/hide protein sequence
MKNRKVADVLSHSGSSPSLSFGFRRALSDRESMEVTALLSLIGEFEFRWERREIRCWSPSPFEGFLCSSYFSALLNPPPIAIPFSLFVEDPNIMKKLQVDRGAIKFVLAG
ANIMCPGLTSPGGALDDEVEAETPVAIMAEGKQHALAIGFTKMSAKEIRATNKGIGVDNMHYLNDGLWKMERLD