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Spg028243 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg028243
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionReverse transcriptase domain-containing protein
Genome locationscaffold2:46870838..46874175
RNA-Seq ExpressionSpg028243
SyntenySpg028243
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF4375842.1 hypothetical protein G4B88_026421 [Cannabis sativa]5.9e-1141.9Show/hide
Query:  FIKQSLLPTTHDSTVSRERVLLAFAILRSLSIDVGKIIASEIFGCWRKKVGKLFFPNTITLLCKRAGVPESTEDVILLDKGVIDM-PNMARLQRTQELGL
        F++ +LLPT+HDSTVSRER+ + + I++   I+VGK+IA EIF C  +  GKLFF   IT  C+ A VP   ++  +  KGV+   P+ A  + T     
Subjt:  FIKQSLLPTTHDSTVSRERVLLAFAILRSLSIDVGKIIASEIFGCWRKKVGKLFFPNTITLLCKRAGVPESTEDVILLDKGVIDM-PNMARLQRTQELGL

Query:  VSLIR
         S  R
Subjt:  VSLIR

PON35554.1 hypothetical protein PanWU01x14_335450, partial [Parasponia andersonii]1.6e-1146.88Show/hide
Query:  FIKQSLLPTTHDSTVSRERVLLAFAILRSLSIDVGKIIASEIFGCWRKKVGKLFFPNTITLLCKRAGVPESTEDVILLDKGVIDMPNMARLQRTQE
        F+K  LLPTTH  TVS++R+LL  ++L   SI+VG++I SEI  C  +K G LFFP+ IT LC+ A  P    +  L + G ID   +AR+  TQE
Subjt:  FIKQSLLPTTHDSTVSRERVLLAFAILRSLSIDVGKIIASEIFGCWRKKVGKLFFPNTITLLCKRAGVPESTEDVILLDKGVIDMPNMARLQRTQE

PON46472.1 hypothetical protein PanWU01x14_251180, partial [Parasponia andersonii]3.5e-1146.15Show/hide
Query:  FIKQSLLPTTHDSTVSRERVLLAFAILRSLSIDVGKIIASEIFGCWRKKVGKLFFPNTITLLCKRAGVPESTEDVILLDKGVIDMPNMARL
        F+K  LLPTTH  TVS++R+LL  ++L   SI+VG++I SEI  C  +K G LFFP+ IT LC+ A  P    +  L + G ID   +AR+
Subjt:  FIKQSLLPTTHDSTVSRERVLLAFAILRSLSIDVGKIIASEIFGCWRKKVGKLFFPNTITLLCKRAGVPESTEDVILLDKGVIDMPNMARL

PON59596.1 hypothetical protein PanWU01x14_158080 [Parasponia andersonii]1.6e-1146.88Show/hide
Query:  FIKQSLLPTTHDSTVSRERVLLAFAILRSLSIDVGKIIASEIFGCWRKKVGKLFFPNTITLLCKRAGVPESTEDVILLDKGVIDMPNMARLQRTQE
        F+K  LLPTTH  TVS++R+LL +++L   SI+VG++I SEI  C  +K G LFFP+ IT LC+ A  P    +  L   G ID   +AR+  TQE
Subjt:  FIKQSLLPTTHDSTVSRERVLLAFAILRSLSIDVGKIIASEIFGCWRKKVGKLFFPNTITLLCKRAGVPESTEDVILLDKGVIDMPNMARLQRTQE

XP_024971944.1 uncharacterized protein LOC112510826 [Cynara cardunculus var. scolymus]1.7e-1339.81Show/hide
Query:  MGFIKQSLLPTTHDSTVSRERVLLAFAILRSLSIDVGKIIASEIFGCWRKKVGKLFFPNTITLLCKRAGVPESTEDVILL---DKGVIDMPNMARLQRTQ
        + FI+ SL PTTHDS++S E+++L + ++   +I+VGK++   I  C +++ GKLFFP+ I  L  +AGVPE T+D+++    +K  IDM  +++L+   
Subjt:  MGFIKQSLLPTTHDSTVSRERVLLAFAILRSLSIDVGKIIASEIFGCWRKKVGKLFFPNTITLLCKRAGVPESTEDVILL---DKGVIDMPNMARLQRTQ

Query:  ELG
        E G
Subjt:  ELG

TrEMBL top hitse value%identityAlignment
A0A2P5AGA5 Uncharacterized protein (Fragment)7.6e-1246.88Show/hide
Query:  FIKQSLLPTTHDSTVSRERVLLAFAILRSLSIDVGKIIASEIFGCWRKKVGKLFFPNTITLLCKRAGVPESTEDVILLDKGVIDMPNMARLQRTQE
        F+K  LLPTTH  TVS++R+LL  ++L   SI+VG++I SEI  C  +K G LFFP+ IT LC+ A  P    +  L + G ID   +AR+  TQE
Subjt:  FIKQSLLPTTHDSTVSRERVLLAFAILRSLSIDVGKIIASEIFGCWRKKVGKLFFPNTITLLCKRAGVPESTEDVILLDKGVIDMPNMARLQRTQE

A0A2P5BCG4 Uncharacterized protein (Fragment)1.7e-1146.15Show/hide
Query:  FIKQSLLPTTHDSTVSRERVLLAFAILRSLSIDVGKIIASEIFGCWRKKVGKLFFPNTITLLCKRAGVPESTEDVILLDKGVIDMPNMARL
        F+K  LLPTTH  TVS++R+LL  ++L   SI+VG++I SEI  C  +K G LFFP+ IT LC+ A  P    +  L + G ID   +AR+
Subjt:  FIKQSLLPTTHDSTVSRERVLLAFAILRSLSIDVGKIIASEIFGCWRKKVGKLFFPNTITLLCKRAGVPESTEDVILLDKGVIDMPNMARL

A0A2P5CEY2 Uncharacterized protein7.6e-1246.88Show/hide
Query:  FIKQSLLPTTHDSTVSRERVLLAFAILRSLSIDVGKIIASEIFGCWRKKVGKLFFPNTITLLCKRAGVPESTEDVILLDKGVIDMPNMARLQRTQE
        F+K  LLPTTH  TVS++R+LL +++L   SI+VG++I SEI  C  +K G LFFP+ IT LC+ A  P    +  L   G ID   +AR+  TQE
Subjt:  FIKQSLLPTTHDSTVSRERVLLAFAILRSLSIDVGKIIASEIFGCWRKKVGKLFFPNTITLLCKRAGVPESTEDVILLDKGVIDMPNMARLQRTQE

A0A7J6FZ22 Uncharacterized protein2.9e-1141.9Show/hide
Query:  FIKQSLLPTTHDSTVSRERVLLAFAILRSLSIDVGKIIASEIFGCWRKKVGKLFFPNTITLLCKRAGVPESTEDVILLDKGVIDM-PNMARLQRTQELGL
        F++ +LLPT+HDSTVSRER+ + + I++   I+VGK+IA EIF C  +  GKLFF   IT  C+ A VP   ++  +  KGV+   P+ A  + T     
Subjt:  FIKQSLLPTTHDSTVSRERVLLAFAILRSLSIDVGKIIASEIFGCWRKKVGKLFFPNTITLLCKRAGVPESTEDVILLDKGVIDM-PNMARLQRTQELGL

Query:  VSLIR
         S  R
Subjt:  VSLIR

A0A803Q715 Uncharacterized protein2.9e-1141.9Show/hide
Query:  FIKQSLLPTTHDSTVSRERVLLAFAILRSLSIDVGKIIASEIFGCWRKKVGKLFFPNTITLLCKRAGVPESTEDVILLDKGVIDM-PNMARLQRTQELGL
        F++ +LLPT+HDSTVSRER+ + + I++   I+VGK+IA EIF C  +  GKLFF   IT  C+ A VP   ++  +  KGV+   P+ A  + T     
Subjt:  FIKQSLLPTTHDSTVSRERVLLAFAILRSLSIDVGKIIASEIFGCWRKKVGKLFFPNTITLLCKRAGVPESTEDVILLDKGVIDM-PNMARLQRTQELGL

Query:  VSLIR
         S  R
Subjt:  VSLIR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGGTTTATCAAACAAAGTCTGCTTCCAACAACGCATGACTCCACGGTCTCTCGGGAAAGAGTTCTTCTAGCTTTTGCAATACTGCGGTCCCTTAGCATCGATGTGGG
TAAAATTATTGCTAGTGAAATTTTTGGATGTTGGAGAAAGAAGGTGGGAAAGCTATTCTTTCCAAACACAATTACATTGCTTTGTAAGAGAGCAGGGGTTCCAGAGAGTA
CAGAGGACGTGATCCTACTAGATAAAGGAGTAATCGACATGCCTAACATGGCACGGCTTCAAAGAACGCAAGAGCTTGGGCTAGTTAGCTTAATTAGATCAAGAGCTAGG
TTGTGGAAAGTTCTTAGGATTGAGTCAAAAGGTGGTGATCATTTGTCCATGCCCGAAGAATTATTTTGCTGCAGCAGTACATGGTTTTGTAGAATGCTCAGCAAATTCTG
TGATCCAGCAAAGCAGGGAGCAAAGCTGCCACGTCCTCTTCGGAGCATTGGAAGCAATTCGGGGCTTAAAAGAGCGAAACCAGAGCGTAAAATGACCATTCTGCCCTTGG
AGCCTCATCAGCGTCGAGACGCCCAGCATCAGAGTCGAGACGCTAACCAAATAAGAAAAGTACTTGTAGATCAAGCTAGAGCAACAGCGTCGCGACGCTATCCCACAGCG
TCACGATGCTAG
mRNA sequenceShow/hide mRNA sequence
ATGGGGTTTATCAAACAAAGTCTGCTTCCAACAACGCATGACTCCACGGTCTCTCGGGAAAGAGTTCTTCTAGCTTTTGCAATACTGCGGTCCCTTAGCATCGATGTGGG
TAAAATTATTGCTAGTGAAATTTTTGGATGTTGGAGAAAGAAGGTGGGAAAGCTATTCTTTCCAAACACAATTACATTGCTTTGTAAGAGAGCAGGGGTTCCAGAGAGTA
CAGAGGACGTGATCCTACTAGATAAAGGAGTAATCGACATGCCTAACATGGCACGGCTTCAAAGAACGCAAGAGCTTGGGCTAGTTAGCTTAATTAGATCAAGAGCTAGG
TTGTGGAAAGTTCTTAGGATTGAGTCAAAAGGTGGTGATCATTTGTCCATGCCCGAAGAATTATTTTGCTGCAGCAGTACATGGTTTTGTAGAATGCTCAGCAAATTCTG
TGATCCAGCAAAGCAGGGAGCAAAGCTGCCACGTCCTCTTCGGAGCATTGGAAGCAATTCGGGGCTTAAAAGAGCGAAACCAGAGCGTAAAATGACCATTCTGCCCTTGG
AGCCTCATCAGCGTCGAGACGCCCAGCATCAGAGTCGAGACGCTAACCAAATAAGAAAAGTACTTGTAGATCAAGCTAGAGCAACAGCGTCGCGACGCTATCCCACAGCG
TCACGATGCTAG
Protein sequenceShow/hide protein sequence
MGFIKQSLLPTTHDSTVSRERVLLAFAILRSLSIDVGKIIASEIFGCWRKKVGKLFFPNTITLLCKRAGVPESTEDVILLDKGVIDMPNMARLQRTQELGLVSLIRSRAR
LWKVLRIESKGGDHLSMPEELFCCSSTWFCRMLSKFCDPAKQGAKLPRPLRSIGSNSGLKRAKPERKMTILPLEPHQRRDAQHQSRDANQIRKVLVDQARATASRRYPTA
SRC