; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg028273 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg028273
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
Description60S ribosomal protein L26
Genome locationscaffold8:26795316..26795756
RNA-Seq ExpressionSpg028273
SyntenySpg028273
Gene Ontology termsGO:0002181 - cytoplasmic translation (biological process)
GO:0042273 - ribosomal large subunit biogenesis (biological process)
GO:0022625 - cytosolic large ribosomal subunit (cellular component)
GO:0003723 - RNA binding (molecular function)
GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domainsIPR005756 - Ribosomal protein L26/L24, eukaryotic/archaeal
IPR005824 - KOW
IPR005825 - Ribosomal protein L24/L26, conserved site
IPR008991 - Translation protein SH3-like domain superfamily
IPR014722 - Ribosomal protein L2, domain 2
IPR041988 - Ribosomal protein L26/L24, KOW domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004148028.1 60S ribosomal protein L26-1 [Cucumis sativus]1.4e-6997.26Show/hide
Query:  MKYNPRVSSSRRKNRKAHFSAPSSVRRVLMSAPLSGDLRSKYNVRSMPIRKDDEVQVLRGTYKGREGKVVQVYRRKWVIHIERITREKVNGSTVNVGIYP
        MKYNPRVSSSRRKNRKAHFSAPSSVRR+LMSA LSGDLRSKYNVRSMPIRKDDEVQVLRGTYKGREGKVVQVYRRKW+IHIERITREKVNGSTVNVGI P
Subjt:  MKYNPRVSSSRRKNRKAHFSAPSSVRRVLMSAPLSGDLRSKYNVRSMPIRKDDEVQVLRGTYKGREGKVVQVYRRKWVIHIERITREKVNGSTVNVGIYP

Query:  SKVMITKLKLDKDRKSLLDRKAKGRASADKDKGTKFTAEDIMQSVD
        SKVMITKLKLDKDRKSLLDRKAKGRASADKDKGTKFTAEDIMQSVD
Subjt:  SKVMITKLKLDKDRKSLLDRKAKGRASADKDKGTKFTAEDIMQSVD

XP_008457837.1 PREDICTED: 60S ribosomal protein L26-1-like [Cucumis melo]1.7e-7097.95Show/hide
Query:  MKYNPRVSSSRRKNRKAHFSAPSSVRRVLMSAPLSGDLRSKYNVRSMPIRKDDEVQVLRGTYKGREGKVVQVYRRKWVIHIERITREKVNGSTVNVGIYP
        MKYNPRVSSSRRKNRKAHFSAPSSVRR+LMSAPLSGDLRSKYNVRSMPIRKDDEVQVLRGTYKGREGKVVQVYRRKW+IHIERITREKVNGSTVNVGI P
Subjt:  MKYNPRVSSSRRKNRKAHFSAPSSVRRVLMSAPLSGDLRSKYNVRSMPIRKDDEVQVLRGTYKGREGKVVQVYRRKWVIHIERITREKVNGSTVNVGIYP

Query:  SKVMITKLKLDKDRKSLLDRKAKGRASADKDKGTKFTAEDIMQSVD
        SKVMITKLKLDKDRKSLLDRKAKGRASADKDKGTKFTAEDIMQSVD
Subjt:  SKVMITKLKLDKDRKSLLDRKAKGRASADKDKGTKFTAEDIMQSVD

XP_022149443.1 60S ribosomal protein L26-1-like [Momordica charantia]3.7e-7097.26Show/hide
Query:  MKYNPRVSSSRRKNRKAHFSAPSSVRRVLMSAPLSGDLRSKYNVRSMPIRKDDEVQVLRGTYKGREGKVVQVYRRKWVIHIERITREKVNGSTVNVGIYP
        MKYNPRVSSSRRKNRKAHF+APSSVRR+LMSAPLSGDLRSKYNVRSMP+RKDDEVQVLRGTYKGREGKVVQVYRRKWVIHIERITREKVNGSTVNVGI P
Subjt:  MKYNPRVSSSRRKNRKAHFSAPSSVRRVLMSAPLSGDLRSKYNVRSMPIRKDDEVQVLRGTYKGREGKVVQVYRRKWVIHIERITREKVNGSTVNVGIYP

Query:  SKVMITKLKLDKDRKSLLDRKAKGRASADKDKGTKFTAEDIMQSVD
        SKVMITKLKLDKDRKSLLDRKAKGRASADKDKGTKFTAEDIMQSVD
Subjt:  SKVMITKLKLDKDRKSLLDRKAKGRASADKDKGTKFTAEDIMQSVD

XP_022931741.1 60S ribosomal protein L26-1-like [Cucurbita moschata]1.4e-6997.26Show/hide
Query:  MKYNPRVSSSRRKNRKAHFSAPSSVRRVLMSAPLSGDLRSKYNVRSMPIRKDDEVQVLRGTYKGREGKVVQVYRRKWVIHIERITREKVNGSTVNVGIYP
        MKYNPRVSSSRRK+RKAHFSAPSSVRRVLMSAPLSGDLRSKYNVRSMPIRKDDEVQVLRGTYKGREGKVVQVYRRKW+IHIERITREKVNGSTVNVGI P
Subjt:  MKYNPRVSSSRRKNRKAHFSAPSSVRRVLMSAPLSGDLRSKYNVRSMPIRKDDEVQVLRGTYKGREGKVVQVYRRKWVIHIERITREKVNGSTVNVGIYP

Query:  SKVMITKLKLDKDRKSLLDRKAKGRASADKDKGTKFTAEDIMQSVD
        SKV+ITKLKLDKDRKSLLDRKAKGRASADKDKGTKFTAEDIMQSVD
Subjt:  SKVMITKLKLDKDRKSLLDRKAKGRASADKDKGTKFTAEDIMQSVD

XP_022948229.1 60S ribosomal protein L26-1-like [Cucurbita moschata]6.3e-7097.26Show/hide
Query:  MKYNPRVSSSRRKNRKAHFSAPSSVRRVLMSAPLSGDLRSKYNVRSMPIRKDDEVQVLRGTYKGREGKVVQVYRRKWVIHIERITREKVNGSTVNVGIYP
        MKYNPRVSSSRRKNRKAHFSAPSSVRRVLMSAPLSGDLRSKYNVRSMPIRKDDEVQVLRGTYKGREGKVVQVYRRKWVIHIER+TREKVNGSTVNVG+ P
Subjt:  MKYNPRVSSSRRKNRKAHFSAPSSVRRVLMSAPLSGDLRSKYNVRSMPIRKDDEVQVLRGTYKGREGKVVQVYRRKWVIHIERITREKVNGSTVNVGIYP

Query:  SKVMITKLKLDKDRKSLLDRKAKGRASADKDKGTKFTAEDIMQSVD
        SKVMITKLKLDKDRKSLLDRKAKGRAS+DKDKGTKFTAEDIMQSVD
Subjt:  SKVMITKLKLDKDRKSLLDRKAKGRASADKDKGTKFTAEDIMQSVD

TrEMBL top hitse value%identityAlignment
A0A1S3C7Q4 60S ribosomal protein L26-1-like8.0e-7197.95Show/hide
Query:  MKYNPRVSSSRRKNRKAHFSAPSSVRRVLMSAPLSGDLRSKYNVRSMPIRKDDEVQVLRGTYKGREGKVVQVYRRKWVIHIERITREKVNGSTVNVGIYP
        MKYNPRVSSSRRKNRKAHFSAPSSVRR+LMSAPLSGDLRSKYNVRSMPIRKDDEVQVLRGTYKGREGKVVQVYRRKW+IHIERITREKVNGSTVNVGI P
Subjt:  MKYNPRVSSSRRKNRKAHFSAPSSVRRVLMSAPLSGDLRSKYNVRSMPIRKDDEVQVLRGTYKGREGKVVQVYRRKWVIHIERITREKVNGSTVNVGIYP

Query:  SKVMITKLKLDKDRKSLLDRKAKGRASADKDKGTKFTAEDIMQSVD
        SKVMITKLKLDKDRKSLLDRKAKGRASADKDKGTKFTAEDIMQSVD
Subjt:  SKVMITKLKLDKDRKSLLDRKAKGRASADKDKGTKFTAEDIMQSVD

A0A5A7TS06 60S ribosomal protein L26-1-like8.0e-7197.95Show/hide
Query:  MKYNPRVSSSRRKNRKAHFSAPSSVRRVLMSAPLSGDLRSKYNVRSMPIRKDDEVQVLRGTYKGREGKVVQVYRRKWVIHIERITREKVNGSTVNVGIYP
        MKYNPRVSSSRRKNRKAHFSAPSSVRR+LMSAPLSGDLRSKYNVRSMPIRKDDEVQVLRGTYKGREGKVVQVYRRKW+IHIERITREKVNGSTVNVGI P
Subjt:  MKYNPRVSSSRRKNRKAHFSAPSSVRRVLMSAPLSGDLRSKYNVRSMPIRKDDEVQVLRGTYKGREGKVVQVYRRKWVIHIERITREKVNGSTVNVGIYP

Query:  SKVMITKLKLDKDRKSLLDRKAKGRASADKDKGTKFTAEDIMQSVD
        SKVMITKLKLDKDRKSLLDRKAKGRASADKDKGTKFTAEDIMQSVD
Subjt:  SKVMITKLKLDKDRKSLLDRKAKGRASADKDKGTKFTAEDIMQSVD

A0A6J1D6T1 60S ribosomal protein L26-1-like1.8e-7097.26Show/hide
Query:  MKYNPRVSSSRRKNRKAHFSAPSSVRRVLMSAPLSGDLRSKYNVRSMPIRKDDEVQVLRGTYKGREGKVVQVYRRKWVIHIERITREKVNGSTVNVGIYP
        MKYNPRVSSSRRKNRKAHF+APSSVRR+LMSAPLSGDLRSKYNVRSMP+RKDDEVQVLRGTYKGREGKVVQVYRRKWVIHIERITREKVNGSTVNVGI P
Subjt:  MKYNPRVSSSRRKNRKAHFSAPSSVRRVLMSAPLSGDLRSKYNVRSMPIRKDDEVQVLRGTYKGREGKVVQVYRRKWVIHIERITREKVNGSTVNVGIYP

Query:  SKVMITKLKLDKDRKSLLDRKAKGRASADKDKGTKFTAEDIMQSVD
        SKVMITKLKLDKDRKSLLDRKAKGRASADKDKGTKFTAEDIMQSVD
Subjt:  SKVMITKLKLDKDRKSLLDRKAKGRASADKDKGTKFTAEDIMQSVD

A0A6J1G998 60S ribosomal protein L26-1-like3.0e-7097.26Show/hide
Query:  MKYNPRVSSSRRKNRKAHFSAPSSVRRVLMSAPLSGDLRSKYNVRSMPIRKDDEVQVLRGTYKGREGKVVQVYRRKWVIHIERITREKVNGSTVNVGIYP
        MKYNPRVSSSRRKNRKAHFSAPSSVRRVLMSAPLSGDLRSKYNVRSMPIRKDDEVQVLRGTYKGREGKVVQVYRRKWVIHIER+TREKVNGSTVNVG+ P
Subjt:  MKYNPRVSSSRRKNRKAHFSAPSSVRRVLMSAPLSGDLRSKYNVRSMPIRKDDEVQVLRGTYKGREGKVVQVYRRKWVIHIERITREKVNGSTVNVGIYP

Query:  SKVMITKLKLDKDRKSLLDRKAKGRASADKDKGTKFTAEDIMQSVD
        SKVMITKLKLDKDRKSLLDRKAKGRAS+DKDKGTKFTAEDIMQSVD
Subjt:  SKVMITKLKLDKDRKSLLDRKAKGRASADKDKGTKFTAEDIMQSVD

A0A6J1L4P7 60S ribosomal protein L26-1-like3.0e-7097.26Show/hide
Query:  MKYNPRVSSSRRKNRKAHFSAPSSVRRVLMSAPLSGDLRSKYNVRSMPIRKDDEVQVLRGTYKGREGKVVQVYRRKWVIHIERITREKVNGSTVNVGIYP
        MKYNPRVSSSRRKNRKAHFSAPSSVRRVLMSAPLSGDLRSKYNVRSMPIRKDDEVQVLRGTYKGREGKVVQVYRRKWVIHIER+TREKVNGSTVNVG+ P
Subjt:  MKYNPRVSSSRRKNRKAHFSAPSSVRRVLMSAPLSGDLRSKYNVRSMPIRKDDEVQVLRGTYKGREGKVVQVYRRKWVIHIERITREKVNGSTVNVGIYP

Query:  SKVMITKLKLDKDRKSLLDRKAKGRASADKDKGTKFTAEDIMQSVD
        SKVMITKLKLDKDRKSLLDRKAKGRAS+DKDKGTKFTAEDIMQSVD
Subjt:  SKVMITKLKLDKDRKSLLDRKAKGRASADKDKGTKFTAEDIMQSVD

SwissProt top hitse value%identityAlignment
P51414 60S ribosomal protein L26-19.8e-6686.3Show/hide
Query:  MKYNPRVSSSRRKNRKAHFSAPSSVRRVLMSAPLSGDLRSKYNVRSMPIRKDDEVQVLRGTYKGREGKVVQVYRRKWVIHIERITREKVNGSTVNVGIYP
        MKYNPRV+SSRRKNRKAHF+A SS RRV+MS+PLS DLR KYNVRSMPIRKDDEVQ++RGTYKGREGKVVQVYRRKWVIHIERITREKVNG+TVNVGI P
Subjt:  MKYNPRVSSSRRKNRKAHFSAPSSVRRVLMSAPLSGDLRSKYNVRSMPIRKDDEVQVLRGTYKGREGKVVQVYRRKWVIHIERITREKVNGSTVNVGIYP

Query:  SKVMITKLKLDKDRKSLLDRKAKGRASADKDKGTKFTAEDIMQSVD
        SKV+ITKL+LDKDRKSLL+RKAKGRA+ADK+KGTKFT+ED+MQ+VD
Subjt:  SKVMITKLKLDKDRKSLLDRKAKGRASADKDKGTKFTAEDIMQSVD

P61257 60S ribosomal protein L267.3e-4568.31Show/hide
Query:  MKYNPRVSSSRRKNRKAHFSAPSSVRRVLMSAPLSGDLRSKYNVRSMPIRKDDEVQVLRGTYKGRE-GKVVQVYRRKWVIHIERITREKVNGSTVNVGIY
        MK+NP V+S R KNRK HF+APS +RR +MS+PLS +LR KYNVRSMPIRKDDEVQV+RG YKG++ GKVVQVYR+K+VI+IER+ REK NG+TV+VGI+
Subjt:  MKYNPRVSSSRRKNRKAHFSAPSSVRRVLMSAPLSGDLRSKYNVRSMPIRKDDEVQVLRGTYKGRE-GKVVQVYRRKWVIHIERITREKVNGSTVNVGIY

Query:  PSKVMITKLKLDKDRKSLLDRKAKGRASADKDKGTKFTAEDI
        PSKV+IT+LKLDKDRK +L+RKAK R    K+KG K+  E I
Subjt:  PSKVMITKLKLDKDRKSLLDRKAKGRASADKDKGTKFTAEDI

Q39411 60S ribosomal protein L262.8e-6080.69Show/hide
Query:  MKYNPRVSSSRRKNRKAHFSAPSSVRRVLMSAPLSGDLRSKYNVRSMPIRKDDEVQVLRGTYKGREGKVVQVYRRKWVIHIERITREKVNGSTVNVGIYP
        MKYNPRV+SSRR+NRK HF+A SS RRV MS+PLS DLR KYNVRSMPIRKDDE Q++RGTYKGREGK+ QVYRRK VIHIER+TREKVNG+TVNVG+ P
Subjt:  MKYNPRVSSSRRKNRKAHFSAPSSVRRVLMSAPLSGDLRSKYNVRSMPIRKDDEVQVLRGTYKGREGKVVQVYRRKWVIHIERITREKVNGSTVNVGIYP

Query:  SKVMITKLKLDKDRKSLLDRKAKGRASADKDKGTKFTAEDIMQSV
        +KV+ITKL+LDKDRKSLL+RKAKGRA+ADKDKGTKFTA D+MQ+V
Subjt:  SKVMITKLKLDKDRKSLLDRKAKGRASADKDKGTKFTAEDIMQSV

Q9FJX2 60S ribosomal protein L26-22.4e-6484.93Show/hide
Query:  MKYNPRVSSSRRKNRKAHFSAPSSVRRVLMSAPLSGDLRSKYNVRSMPIRKDDEVQVLRGTYKGREGKVVQVYRRKWVIHIERITREKVNGSTVNVGIYP
        MK+NPRVSSSRRKNRKAHF+APSSVRRVLMS+PLS DLR+K+NVRSMPIRKDDEVQV+RGT+KGREGKV+QVYRRKWVIHIERITREKVNGSTVNVG+  
Subjt:  MKYNPRVSSSRRKNRKAHFSAPSSVRRVLMSAPLSGDLRSKYNVRSMPIRKDDEVQVLRGTYKGREGKVVQVYRRKWVIHIERITREKVNGSTVNVGIYP

Query:  SKVMITKLKLDKDRKSLLDRKAKGRASADKDKGTKFTAEDIMQSVD
        S VMITKL+LDKDRKSLL+RKA GRA+ADK+KGTKF+AED+M++VD
Subjt:  SKVMITKLKLDKDRKSLLDRKAKGRASADKDKGTKFTAEDIMQSVD

Q9UNX3 60S ribosomal protein L26-like 17.3e-4570.9Show/hide
Query:  MKYNPRVSSSRRKNRKAHFSAPSSVRRVLMSAPLSGDLRSKYNVRSMPIRKDDEVQVLRGTYKGRE-GKVVQVYRRKWVIHIERITREKVNGSTVNVGIY
        MK+NP V+S R KNRK HF+APS VRR +MS+PLS +LR KYNVRSMPIRKDDEVQV+RG YKG++ GKVVQVYR+K+VI+IER+ REK NG+TV+VGI+
Subjt:  MKYNPRVSSSRRKNRKAHFSAPSSVRRVLMSAPLSGDLRSKYNVRSMPIRKDDEVQVLRGTYKGRE-GKVVQVYRRKWVIHIERITREKVNGSTVNVGIY

Query:  PSKVMITKLKLDKDRKSLLDRKAKGRASADKDKG
        PSKV+IT+LKLDKDRK +L+RKAK R    K+KG
Subjt:  PSKVMITKLKLDKDRKSLLDRKAKGRASADKDKG

Arabidopsis top hitse value%identityAlignment
AT3G49910.1 Translation protein SH3-like family protein6.9e-6786.3Show/hide
Query:  MKYNPRVSSSRRKNRKAHFSAPSSVRRVLMSAPLSGDLRSKYNVRSMPIRKDDEVQVLRGTYKGREGKVVQVYRRKWVIHIERITREKVNGSTVNVGIYP
        MKYNPRV+SSRRKNRKAHF+A SS RRV+MS+PLS DLR KYNVRSMPIRKDDEVQ++RGTYKGREGKVVQVYRRKWVIHIERITREKVNG+TVNVGI P
Subjt:  MKYNPRVSSSRRKNRKAHFSAPSSVRRVLMSAPLSGDLRSKYNVRSMPIRKDDEVQVLRGTYKGREGKVVQVYRRKWVIHIERITREKVNGSTVNVGIYP

Query:  SKVMITKLKLDKDRKSLLDRKAKGRASADKDKGTKFTAEDIMQSVD
        SKV+ITKL+LDKDRKSLL+RKAKGRA+ADK+KGTKFT+ED+MQ+VD
Subjt:  SKVMITKLKLDKDRKSLLDRKAKGRASADKDKGTKFTAEDIMQSVD

AT5G67510.1 Translation protein SH3-like family protein1.7e-6584.93Show/hide
Query:  MKYNPRVSSSRRKNRKAHFSAPSSVRRVLMSAPLSGDLRSKYNVRSMPIRKDDEVQVLRGTYKGREGKVVQVYRRKWVIHIERITREKVNGSTVNVGIYP
        MK+NPRVSSSRRKNRKAHF+APSSVRRVLMS+PLS DLR+K+NVRSMPIRKDDEVQV+RGT+KGREGKV+QVYRRKWVIHIERITREKVNGSTVNVG+  
Subjt:  MKYNPRVSSSRRKNRKAHFSAPSSVRRVLMSAPLSGDLRSKYNVRSMPIRKDDEVQVLRGTYKGREGKVVQVYRRKWVIHIERITREKVNGSTVNVGIYP

Query:  SKVMITKLKLDKDRKSLLDRKAKGRASADKDKGTKFTAEDIMQSVD
        S VMITKL+LDKDRKSLL+RKA GRA+ADK+KGTKF+AED+M++VD
Subjt:  SKVMITKLKLDKDRKSLLDRKAKGRASADKDKGTKFTAEDIMQSVD


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGTACAACCCTAGAGTCTCCAGCTCCCGCCGTAAGAACAGGAAGGCTCACTTCTCTGCGCCGTCGAGCGTCCGGCGGGTTCTGATGAGTGCACCCCTCTCCGGCGA
CCTGCGCTCCAAGTACAATGTCCGCTCGATGCCGATTCGCAAGGACGACGAAGTTCAGGTCTTGAGAGGAACCTACAAAGGCCGTGAAGGTAAGGTCGTTCAGGTCTACC
GTCGCAAGTGGGTCATTCACATCGAGCGCATCACCAGAGAGAAGGTGAACGGCTCCACCGTCAACGTCGGAATCTATCCCTCCAAGGTTATGATCACTAAACTCAAGTTG
GACAAGGACAGGAAGTCGCTGCTCGATCGTAAGGCTAAGGGCCGTGCTTCTGCCGATAAGGATAAGGGCACTAAATTTACTGCTGAGGATATTATGCAAAGCGTCGACTA
A
mRNA sequenceShow/hide mRNA sequence
ATGAAGTACAACCCTAGAGTCTCCAGCTCCCGCCGTAAGAACAGGAAGGCTCACTTCTCTGCGCCGTCGAGCGTCCGGCGGGTTCTGATGAGTGCACCCCTCTCCGGCGA
CCTGCGCTCCAAGTACAATGTCCGCTCGATGCCGATTCGCAAGGACGACGAAGTTCAGGTCTTGAGAGGAACCTACAAAGGCCGTGAAGGTAAGGTCGTTCAGGTCTACC
GTCGCAAGTGGGTCATTCACATCGAGCGCATCACCAGAGAGAAGGTGAACGGCTCCACCGTCAACGTCGGAATCTATCCCTCCAAGGTTATGATCACTAAACTCAAGTTG
GACAAGGACAGGAAGTCGCTGCTCGATCGTAAGGCTAAGGGCCGTGCTTCTGCCGATAAGGATAAGGGCACTAAATTTACTGCTGAGGATATTATGCAAAGCGTCGACTA
A
Protein sequenceShow/hide protein sequence
MKYNPRVSSSRRKNRKAHFSAPSSVRRVLMSAPLSGDLRSKYNVRSMPIRKDDEVQVLRGTYKGREGKVVQVYRRKWVIHIERITREKVNGSTVNVGIYPSKVMITKLKL
DKDRKSLLDRKAKGRASADKDKGTKFTAEDIMQSVD