; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg028288 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg028288
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
Descriptionglycosyl hydrolase family protein 43
Genome locationscaffold8:26567557..26568762
RNA-Seq ExpressionSpg028288
SyntenySpg028288
Gene Ontology termsGO:0005975 - carbohydrate metabolic process (biological process)
GO:0016021 - integral component of membrane (cellular component)
GO:0004553 - hydrolase activity, hydrolyzing O-glycosyl compounds (molecular function)
InterPro domainsIPR023296 - Glycosyl hydrolase, five-bladed beta-propellor domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6571279.1 hypothetical protein SDJN03_30194, partial [Cucurbita argyrosperma subsp. sororia]6.6e-6986.58Show/hide
Query:  LSSCCLIRRKDETGQGIQLRTSHHLHFRELEEVEEENIQIPPPRGKRSPRAAKRRPKRTTTLIDEFLDEDSQLRHKFFPAHKTAVDPMITGNESMFYYPA
        L  C  + RKDE G+GIQLRTS HLHFRELEEVEEENIQIPPPR KRSPRAAKRRPK+T TLIDEFLDEDSQLR KFFP HKT+VDPMI G++SMFYYP 
Subjt:  LSSCCLIRRKDETGQGIQLRTSHHLHFRELEEVEEENIQIPPPRGKRSPRAAKRRPKRTTTLIDEFLDEDSQLRHKFFPAHKTAVDPMITGNESMFYYPA

Query:  RVWLDTEGNPIQAHGGGVLYDERSETYYWYGEYKDGPTYHAHKKGAARV
        RVWLDTEGNPIQAHGGGVL+DERSETYYWYGEYKDGPTYHAHKKGAARV
Subjt:  RVWLDTEGNPIQAHGGGVLYDERSETYYWYGEYKDGPTYHAHKKGAARV

XP_022149504.1 uncharacterized protein LOC111017920 [Momordica charantia]1.7e-6986.71Show/hide
Query:  IRRKDETGQGIQLRTSHHLHFRELEEVEEENIQIPPPRGKRSPRAAKRRPKRTTTLIDEFLDEDSQLRHKFFPAHKTAVDPMITGNESMFYYPARVWLDT
        I RKDE  +GI+L+TSHHL FRELEEV+EENIQIPPPRGKRSPRAAKRRPK+TTTLIDEFLDEDSQ+RHKFFP HKT+VDPM TGN+SM+YYP RVWLDT
Subjt:  IRRKDETGQGIQLRTSHHLHFRELEEVEEENIQIPPPRGKRSPRAAKRRPKRTTTLIDEFLDEDSQLRHKFFPAHKTAVDPMITGNESMFYYPARVWLDT

Query:  EGNPIQAHGGGVLYDERSETYYWYGEYKDGPTYHAHKKGAARV
        EGNPIQAHGGG+L+DERSE+YYWYGEYKDGPTYHAHKKGAARV
Subjt:  EGNPIQAHGGGVLYDERSETYYWYGEYKDGPTYHAHKKGAARV

XP_022927964.1 uncharacterized protein LOC111434812 [Cucurbita moschata]1.3e-6981.82Show/hide
Query:  CGFSGVFFCLARCFWLSSCCL-IRRKDETGQGIQLRTSHHLHFRELEEVEEENIQIPPPRGKRSPRAAKRRPKRTTTLIDEFLDEDSQLRHKFFPAHKTA
        C  S V   L  C  L   C  + RKDE G+GIQLRTS HLHFRELEEVEEENIQIPPPR KRSPRAAKRRPK+T TLIDEFLDEDSQLRHKFFP HKT+
Subjt:  CGFSGVFFCLARCFWLSSCCL-IRRKDETGQGIQLRTSHHLHFRELEEVEEENIQIPPPRGKRSPRAAKRRPKRTTTLIDEFLDEDSQLRHKFFPAHKTA

Query:  VDPMITGNESMFYYPARVWLDTEGNPIQAHGGGVLYDERSETYYWYGEYKDGPTYHAHKKGAARV
        VDPMI G++SMFYYP RVWLDTEGNPIQAHGGGVL+DERSETYYWYGEYKDGPTYHAHKKGAARV
Subjt:  VDPMITGNESMFYYPARVWLDTEGNPIQAHGGGVLYDERSETYYWYGEYKDGPTYHAHKKGAARV

XP_023553112.1 uncharacterized protein LOC111810610 [Cucurbita pepo subsp. pepo]1.0e-6981.82Show/hide
Query:  CGFSGVFFCLARCFWLSSCCL-IRRKDETGQGIQLRTSHHLHFRELEEVEEENIQIPPPRGKRSPRAAKRRPKRTTTLIDEFLDEDSQLRHKFFPAHKTA
        C  S V   L  C  L   C  + RKDE G+GIQLRTS HLHFRELEEVEEENIQIPPPR KRSPRAAKRRPK+T TLIDEFLDEDSQLRHKFFP HKT+
Subjt:  CGFSGVFFCLARCFWLSSCCL-IRRKDETGQGIQLRTSHHLHFRELEEVEEENIQIPPPRGKRSPRAAKRRPKRTTTLIDEFLDEDSQLRHKFFPAHKTA

Query:  VDPMITGNESMFYYPARVWLDTEGNPIQAHGGGVLYDERSETYYWYGEYKDGPTYHAHKKGAARV
        VDPMI G++SMFYYP RVWLDTEGNPIQAHGGGVL+DERSETYYWYGEYKDGPTYHAHKKGAARV
Subjt:  VDPMITGNESMFYYPARVWLDTEGNPIQAHGGGVLYDERSETYYWYGEYKDGPTYHAHKKGAARV

XP_038901231.1 uncharacterized protein LOC120088188 [Benincasa hispida]4.2e-7192.91Show/hide
Query:  RKDETGQGIQLRTSHHLHFRELEEVEEENIQIPPPRGKRSPRAAKRRPKRTTTLIDEFLDEDSQLRHKFFPAHKTAVDPMITGNESMFYYPARVWLDTEG
        RKDE GQGIQLRTSHHLHFRELEEVEEENIQIPPPR KRSPRA+KRRPKRT TLIDEFLDEDSQLRHKFFP HKT+VDPM+TGN+SMFYYP RVWLDTEG
Subjt:  RKDETGQGIQLRTSHHLHFRELEEVEEENIQIPPPRGKRSPRAAKRRPKRTTTLIDEFLDEDSQLRHKFFPAHKTAVDPMITGNESMFYYPARVWLDTEG

Query:  NPIQAHGGGVLYDERSETYYWYGEYKDGPTYHAHKKGAARV
        NPIQAHGGGVL DERSETYYWYGEYKDGPTYHAHKKGAARV
Subjt:  NPIQAHGGGVLYDERSETYYWYGEYKDGPTYHAHKKGAARV

TrEMBL top hitse value%identityAlignment
A0A5A7TSK3 Glycosyl hydrolase family protein 43 isoform 24.6e-6879.64Show/hide
Query:  CGFSGVFFCLARCFWLSSC-CLIRRKDETGQGIQLRTSHHLHFRELEEVEEENIQIPPPRGKRSPRAAKRRPKRTTTLIDEFLDEDSQLRHKFFPAHKTA
        C  S V   L  C  L +    IR  DE GQ I LRTSHHLHF ELEEVEEENIQIPPPR KRSPRA KRRPK+TTTLIDEFLDEDSQ+RHKFFP  KT+
Subjt:  CGFSGVFFCLARCFWLSSC-CLIRRKDETGQGIQLRTSHHLHFRELEEVEEENIQIPPPRGKRSPRAAKRRPKRTTTLIDEFLDEDSQLRHKFFPAHKTA

Query:  VDPMITGNESMFYYPARVWLDTEGNPIQAHGGGVLYDERSETYYWYGEYKDGPTYHAHKKGAARVKA
        +DPMITGN+SMFYYP RVWLDTEGNPIQAHGGGVL+DERS TYYWYGEYKDGPTYHAHKKGAARVKA
Subjt:  VDPMITGNESMFYYPARVWLDTEGNPIQAHGGGVLYDERSETYYWYGEYKDGPTYHAHKKGAARVKA

A0A6J1D780 uncharacterized protein LOC1110179208.5e-7086.71Show/hide
Query:  IRRKDETGQGIQLRTSHHLHFRELEEVEEENIQIPPPRGKRSPRAAKRRPKRTTTLIDEFLDEDSQLRHKFFPAHKTAVDPMITGNESMFYYPARVWLDT
        I RKDE  +GI+L+TSHHL FRELEEV+EENIQIPPPRGKRSPRAAKRRPK+TTTLIDEFLDEDSQ+RHKFFP HKT+VDPM TGN+SM+YYP RVWLDT
Subjt:  IRRKDETGQGIQLRTSHHLHFRELEEVEEENIQIPPPRGKRSPRAAKRRPKRTTTLIDEFLDEDSQLRHKFFPAHKTAVDPMITGNESMFYYPARVWLDT

Query:  EGNPIQAHGGGVLYDERSETYYWYGEYKDGPTYHAHKKGAARV
        EGNPIQAHGGG+L+DERSE+YYWYGEYKDGPTYHAHKKGAARV
Subjt:  EGNPIQAHGGGVLYDERSETYYWYGEYKDGPTYHAHKKGAARV

A0A6J1EJG7 uncharacterized protein LOC1114348126.5e-7081.82Show/hide
Query:  CGFSGVFFCLARCFWLSSCCL-IRRKDETGQGIQLRTSHHLHFRELEEVEEENIQIPPPRGKRSPRAAKRRPKRTTTLIDEFLDEDSQLRHKFFPAHKTA
        C  S V   L  C  L   C  + RKDE G+GIQLRTS HLHFRELEEVEEENIQIPPPR KRSPRAAKRRPK+T TLIDEFLDEDSQLRHKFFP HKT+
Subjt:  CGFSGVFFCLARCFWLSSCCL-IRRKDETGQGIQLRTSHHLHFRELEEVEEENIQIPPPRGKRSPRAAKRRPKRTTTLIDEFLDEDSQLRHKFFPAHKTA

Query:  VDPMITGNESMFYYPARVWLDTEGNPIQAHGGGVLYDERSETYYWYGEYKDGPTYHAHKKGAARV
        VDPMI G++SMFYYP RVWLDTEGNPIQAHGGGVL+DERSETYYWYGEYKDGPTYHAHKKGAARV
Subjt:  VDPMITGNESMFYYPARVWLDTEGNPIQAHGGGVLYDERSETYYWYGEYKDGPTYHAHKKGAARV

A0A6J1G831 uncharacterized protein LOC1114516041.0e-6788.89Show/hide
Query:  IRRKDE-TGQGIQLRTSHHLHFRELEEVEEENIQIPPPRGKRSPRAAKRRPKRTTTLIDEFLDEDSQLRHKFFPAHKTAVDPMITGNESMFYYPARVWLD
        I RKD   GQ IQLRTSH L+FRELEEVEEE IQIPPPRGKRSPRAAKRRPKRTTTLIDEFLDEDS LRHKFFP  KT+VDP ITGN+SMFYYP RVWLD
Subjt:  IRRKDE-TGQGIQLRTSHHLHFRELEEVEEENIQIPPPRGKRSPRAAKRRPKRTTTLIDEFLDEDSQLRHKFFPAHKTAVDPMITGNESMFYYPARVWLD

Query:  TEGNPIQAHGGGVLYDERSETYYWYGEYKDGPTYHAHKKGAARV
        TEGNPIQAHGGGVLYDE SETYYWYGEYKDGPTYHAHKKGAARV
Subjt:  TEGNPIQAHGGGVLYDERSETYYWYGEYKDGPTYHAHKKGAARV

A0A6J1IHC3 uncharacterized protein LOC1114735205.5e-6981.21Show/hide
Query:  CGFSGVFFCLARCFWLSSCCL-IRRKDETGQGIQLRTSHHLHFRELEEVEEENIQIPPPRGKRSPRAAKRRPKRTTTLIDEFLDEDSQLRHKFFPAHKTA
        C  S V   L  C  L   C  + RK E G+GIQLRTS HLHFRELEEVEEENIQIPPPR KRSPRAAKRRPK+T TLIDEFLDEDSQLRHKFFP HKT+
Subjt:  CGFSGVFFCLARCFWLSSCCL-IRRKDETGQGIQLRTSHHLHFRELEEVEEENIQIPPPRGKRSPRAAKRRPKRTTTLIDEFLDEDSQLRHKFFPAHKTA

Query:  VDPMITGNESMFYYPARVWLDTEGNPIQAHGGGVLYDERSETYYWYGEYKDGPTYHAHKKGAARV
        VDPMI G++SMFYYP RVWLDTEGNPIQAHGGGVL+DERSETYYWYGEYKDGPTYHAHKKGAARV
Subjt:  VDPMITGNESMFYYPARVWLDTEGNPIQAHGGGVLYDERSETYYWYGEYKDGPTYHAHKKGAARV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G49880.1 glycosyl hydrolase family protein 432.9e-4653.98Show/hide
Query:  ASFLVCGFSGVFFCLARCFWLSSCCLIRRKDETGQGIQLRTS-----HHLHFRELEEVEEENIQIPPPRGKRSPRAAKRRPKRTTTLIDEFLDEDSQLRH
        A+FL C   G+   +  C ++    ++  +      + L  S     HH   RELE VEEENI +PPPR KRSPRA KR+PK  TTL++EFLDE+SQ+RH
Subjt:  ASFLVCGFSGVFFCLARCFWLSSCCLIRRKDETGQGIQLRTS-----HHLHFRELEEVEEENIQIPPPRGKRSPRAAKRRPKRTTTLIDEFLDEDSQLRH

Query:  KFFPAHKTAVDPM--ITGNESMFYYPARVWLDTEGNPIQAHGGGVLYDERSETYYWYGEYKDGPTYHAHKKGAARV
         FFP  K+A  P    T + S +Y+P R+W DTEGNPIQAHGGG+L+D+ S+ YYWYGEYKDGPTY +HKKGAARV
Subjt:  KFFPAHKTAVDPM--ITGNESMFYYPARVWLDTEGNPIQAHGGGVLYDERSETYYWYGEYKDGPTYHAHKKGAARV

AT5G67540.1 Arabinanase/levansucrase/invertase8.7e-4359.85Show/hide
Query:  QLRTSHHLH---FRELEEVEEENIQIPPPRGKRSPRAAKRRPKRTTTLIDEFLDEDSQLRHKFFPAHKTAV--DPMITGNESMFYYPARVWLDTEGNPIQ
        QL+  HHL     REL  VEEE +++PPPR KRSPR +KRR ++   L++EFLD+ S +RH FFP  KTA        GNE+ +Y+P ++W+DT+GNPIQ
Subjt:  QLRTSHHLH---FRELEEVEEENIQIPPPRGKRSPRAAKRRPKRTTTLIDEFLDEDSQLRHKFFPAHKTAV--DPMITGNESMFYYPARVWLDTEGNPIQ

Query:  AHGGGVLYDERSETYYWYGEYKDGPTYHAHKKGAARV
        AHGGG+L D +S TYYWYGEYKDGPTYHAHKKG ARV
Subjt:  AHGGGVLYDERSETYYWYGEYKDGPTYHAHKKGAARV

AT5G67540.2 Arabinanase/levansucrase/invertase8.7e-4359.85Show/hide
Query:  QLRTSHHLH---FRELEEVEEENIQIPPPRGKRSPRAAKRRPKRTTTLIDEFLDEDSQLRHKFFPAHKTAV--DPMITGNESMFYYPARVWLDTEGNPIQ
        QL+  HHL     REL  VEEE +++PPPR KRSPR +KRR ++   L++EFLD+ S +RH FFP  KTA        GNE+ +Y+P ++W+DT+GNPIQ
Subjt:  QLRTSHHLH---FRELEEVEEENIQIPPPRGKRSPRAAKRRPKRTTTLIDEFLDEDSQLRHKFFPAHKTAV--DPMITGNESMFYYPARVWLDTEGNPIQ

Query:  AHGGGVLYDERSETYYWYGEYKDGPTYHAHKKGAARV
        AHGGG+L D +S TYYWYGEYKDGPTYHAHKKG ARV
Subjt:  AHGGGVLYDERSETYYWYGEYKDGPTYHAHKKGAARV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCTCGGAATTTTGCCTCATTTTTAGTTTGTGGGTTTTCAGGTGTGTTTTTCTGTTTGGCTCGTTGTTTCTGGCTCTCGAGTTGCTGTTTAATTCGCCGCAAGGATGA
GACAGGTCAGGGTATCCAACTTCGAACAAGTCATCACCTTCACTTCCGTGAGCTTGAAGAAGTGGAAGAAGAAAACATTCAAATTCCCCCTCCCAGGGGTAAGAGATCTC
CACGTGCAGCAAAGCGAAGACCAAAGAGAACAACCACACTGATTGATGAATTTCTTGATGAAGATTCACAGCTCAGGCACAAATTCTTTCCTGCTCATAAAACTGCCGTT
GATCCAATGATCACAGGAAATGAAAGTATGTTCTATTATCCTGCGAGAGTTTGGCTGGATACTGAAGGAAATCCCATTCAAGCTCATGGAGGTGGAGTTTTGTACGATGA
AAGATCTGAAACATACTATTGGTATGGAGAGTATAAAGATGGCCCCACCTACCATGCTCACAAAAAGGGAGCTGCACGGGTAAAAGCATCAATACTCTGCCTTTCTTGA
mRNA sequenceShow/hide mRNA sequence
ATGTCTCGGAATTTTGCCTCATTTTTAGTTTGTGGGTTTTCAGGTGTGTTTTTCTGTTTGGCTCGTTGTTTCTGGCTCTCGAGTTGCTGTTTAATTCGCCGCAAGGATGA
GACAGGTCAGGGTATCCAACTTCGAACAAGTCATCACCTTCACTTCCGTGAGCTTGAAGAAGTGGAAGAAGAAAACATTCAAATTCCCCCTCCCAGGGGTAAGAGATCTC
CACGTGCAGCAAAGCGAAGACCAAAGAGAACAACCACACTGATTGATGAATTTCTTGATGAAGATTCACAGCTCAGGCACAAATTCTTTCCTGCTCATAAAACTGCCGTT
GATCCAATGATCACAGGAAATGAAAGTATGTTCTATTATCCTGCGAGAGTTTGGCTGGATACTGAAGGAAATCCCATTCAAGCTCATGGAGGTGGAGTTTTGTACGATGA
AAGATCTGAAACATACTATTGGTATGGAGAGTATAAAGATGGCCCCACCTACCATGCTCACAAAAAGGGAGCTGCACGGGTAAAAGCATCAATACTCTGCCTTTCTTGA
Protein sequenceShow/hide protein sequence
MSRNFASFLVCGFSGVFFCLARCFWLSSCCLIRRKDETGQGIQLRTSHHLHFRELEEVEEENIQIPPPRGKRSPRAAKRRPKRTTTLIDEFLDEDSQLRHKFFPAHKTAV
DPMITGNESMFYYPARVWLDTEGNPIQAHGGGVLYDERSETYYWYGEYKDGPTYHAHKKGAARVKASILCLS