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Spg028296 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg028296
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionTransmembrane protein
Genome locationscaffold8:27545718..27549899
RNA-Seq ExpressionSpg028296
SyntenySpg028296
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
CBI23537.3 unnamed protein product, partial [Vitis vinifera]3.2e-1686.79Show/hide
Query:  MFGRSRFLSFPMVIGAVIIGVVSGKAIFGPPLDEYWKKKLDEEAAAKETASCS
        MFGR RFLSFP+VIGAV+IGVVSGKAIFGPPLDEYWKKKL EEAAAKET + S
Subjt:  MFGRSRFLSFPMVIGAVIIGVVSGKAIFGPPLDEYWKKKLDEEAAAKETASCS

KAA0045764.1 hypothetical protein E6C27_scaffold243G002850 [Cucumis melo var. makuwa]2.4e-1683.64Show/hide
Query:  MFGRSRFLSFPMVIGAVIIGVVSGKAIFGPPLDEYWKKKLDEEAAAKETASCSAT
        M GRSRFLSFPMV+GAVIIGVVSGKAIFGPPLDEYWKKKL+EEAAAKET + + +
Subjt:  MFGRSRFLSFPMVIGAVIIGVVSGKAIFGPPLDEYWKKKLDEEAAAKETASCSAT

ONI02716.1 hypothetical protein PRUPE_6G217600 [Prunus persica]1.9e-1687.04Show/hide
Query:  MFGRSRFLSFPMVIGAVIIGVVSGKAIFGPPLDEYWKKKLDEEAAAKETASCSA
        MFGRSRFLSFPMVIGAV+IGVVSGKAIFGPPLDEYWKKK  EEAAAKET + S+
Subjt:  MFGRSRFLSFPMVIGAVIIGVVSGKAIFGPPLDEYWKKKLDEEAAAKETASCSA

PNT26302.1 hypothetical protein POPTR_007G006700 [Populus trichocarpa]1.4e-1690.57Show/hide
Query:  MFGRSRFLSFPMVIGAVIIGVVSGKAIFGPPLDEYWKKKLDEEAAAKETASCS
        MF RSRFLSFP+VIGAVIIGVVSGKAIFGPPLDEYWKKKLDEEAAAKET + S
Subjt:  MFGRSRFLSFPMVIGAVIIGVVSGKAIFGPPLDEYWKKKLDEEAAAKETASCS

XP_034690058.1 uncharacterized protein LOC117917777 [Vitis riparia]3.2e-1686.79Show/hide
Query:  MFGRSRFLSFPMVIGAVIIGVVSGKAIFGPPLDEYWKKKLDEEAAAKETASCS
        MFGR RFLSFP+VIGAV+IGVVSGKAIFGPPLDEYWKKKL EEAAAKET + S
Subjt:  MFGRSRFLSFPMVIGAVIIGVVSGKAIFGPPLDEYWKKKLDEEAAAKETASCS

TrEMBL top hitse value%identityAlignment
A0A0A0LPX1 Uncharacterized protein1.2e-1683.64Show/hide
Query:  MFGRSRFLSFPMVIGAVIIGVVSGKAIFGPPLDEYWKKKLDEEAAAKETASCSAT
        M GRSRFLSFPMV+GAVIIGVVSGKAIFGPPLDEYWKKKL+EEAAAKET + + +
Subjt:  MFGRSRFLSFPMVIGAVIIGVVSGKAIFGPPLDEYWKKKLDEEAAAKETASCSAT

A0A251NTQ5 Uncharacterized protein9.1e-1787.04Show/hide
Query:  MFGRSRFLSFPMVIGAVIIGVVSGKAIFGPPLDEYWKKKLDEEAAAKETASCSA
        MFGRSRFLSFPMVIGAV+IGVVSGKAIFGPPLDEYWKKK  EEAAAKET + S+
Subjt:  MFGRSRFLSFPMVIGAVIIGVVSGKAIFGPPLDEYWKKKLDEEAAAKETASCSA

A0A5D3BMY9 Uncharacterized protein1.2e-1683.64Show/hide
Query:  MFGRSRFLSFPMVIGAVIIGVVSGKAIFGPPLDEYWKKKLDEEAAAKETASCSAT
        M GRSRFLSFPMV+GAVIIGVVSGKAIFGPPLDEYWKKKL+EEAAAKET + + +
Subjt:  MFGRSRFLSFPMVIGAVIIGVVSGKAIFGPPLDEYWKKKLDEEAAAKETASCSAT

A0A5E4F5S4 PREDICTED: transmembrane9.1e-1787.04Show/hide
Query:  MFGRSRFLSFPMVIGAVIIGVVSGKAIFGPPLDEYWKKKLDEEAAAKETASCSA
        MFGRSRFLSFPMVIGAV+IGVVSGKAIFGPPLDEYWKKK  EEAAAKET + S+
Subjt:  MFGRSRFLSFPMVIGAVIIGVVSGKAIFGPPLDEYWKKKLDEEAAAKETASCSA

U5GB04 Uncharacterized protein6.9e-1790.57Show/hide
Query:  MFGRSRFLSFPMVIGAVIIGVVSGKAIFGPPLDEYWKKKLDEEAAAKETASCS
        MF RSRFLSFP+VIGAVIIGVVSGKAIFGPPLDEYWKKKLDEEAAAKET + S
Subjt:  MFGRSRFLSFPMVIGAVIIGVVSGKAIFGPPLDEYWKKKLDEEAAAKETASCS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT5G65880.1 unknown protein2.2e-1578Show/hide
Query:  MFGRSRFLSFPMVIGAVIIGVVSGKAIFGPPLDEYWKKKLDEEAA--AKE
        MF R+RFLS PMVIGAV+IGVVSGKAIFGPPLD+YWK+KL+ E A  AKE
Subjt:  MFGRSRFLSFPMVIGAVIIGVVSGKAIFGPPLDEYWKKKLDEEAA--AKE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTCGGTCGAAGCAGGTTCCTCTCGTTCCCCATGGTAATTGGCGCTGTTATCATTGGTGTTGTTTCTGGGAAAGCAATATTTGGGCCACCACTTGATGAATACTGGAA
AAAGAAACTGGACGAGGAGGCAGCTGCCAAGGAGACAGCGTCATGCTCCGCAACTGGCATGATTTCTGCGTCATGTTCCGCAATTTACATGATTTTCGCGTCATGTTCCG
CACCTACCCCACATGAATTCCGTGCCATGTGTTGCGCCACTCTTACGTGA
mRNA sequenceShow/hide mRNA sequence
ATGTTCGGTCGAAGCAGGTTCCTCTCGTTCCCCATGGTAATTGGCGCTGTTATCATTGGTGTTGTTTCTGGGAAAGCAATATTTGGGCCACCACTTGATGAATACTGGAA
AAAGAAACTGGACGAGGAGGCAGCTGCCAAGGAGACAGCGTCATGCTCCGCAACTGGCATGATTTCTGCGTCATGTTCCGCAATTTACATGATTTTCGCGTCATGTTCCG
CACCTACCCCACATGAATTCCGTGCCATGTGTTGCGCCACTCTTACGTGA
Protein sequenceShow/hide protein sequence
MFGRSRFLSFPMVIGAVIIGVVSGKAIFGPPLDEYWKKKLDEEAAAKETASCSATGMISASCSAIYMIFASCSAPTPHEFRAMCCATLT