CuGenDBv2

Gene ID	Spg028300
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	Ribose-5-phosphate isomerase A
Genome location	scaffold8:26728006..26729719
RNA-Seq Expression	Spg028300
Synteny	Spg028300
Gene Ontology terms	GO:0005975 - carbohydrate metabolic process (biological process) GO:0016021 - integral component of membrane (cellular component) GO:0004553 - hydrolase activity, hydrolyzing O-glycosyl compounds (molecular function)
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

KAG6605231.1 hypothetical protein SDJN03_02548, partial [Cucurbita argyrosperma subsp. sororia]

8.8e-52

88.89

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Query:  MGDRRNGGYGGDSSSGEEDGDAKWRAAIDSVAITSVFLSSLTNGLPATSTTTASNSDDHSELNLGAQPPKQYQIKVSAQKLLENILETTLEVVEHSIAIP
        MGD+ NGGYGGDSSSGEEDGDA+WRAAIDSV  TSVFLSSLTNGLPATS TTASNSDD SELNLG QPPKQYQIK  AQK+LENILETTLEVVEHS AIP
Subjt:  MGDRRNGGYGGDSSSGEEDGDAKWRAAIDSVAITSVFLSSLTNGLPATSTTTASNSDDHSELNLGAQPPKQYQIKVSAQKLLENILETTLEVVEHSIAIP

Query:  CDDSKPSEGGIRLFKNAPVGVVFDHV
        CDDSK SEGGIRLFKNAPVGVVFDH+
Subjt:  CDDSKPSEGGIRLFKNAPVGVVFDHV

KAG7035197.1 hypothetical protein SDJN02_01992 [Cucurbita argyrosperma subsp. argyrosperma]

7.5e-51

88.1

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Query:  MGDRRNGGYGGDSSSGEEDGDAKWRAAIDSVAITSVFLSSLTNGLPATSTTTASNSDDHSELNLGAQPPKQYQIKVSAQKLLENILETTLEVVEHSIAIP
        MGD  NGGYGGDSSSGEEDGDA+WRAAIDSV  TSVFLSSLTNGLPATS TTASNSD  SELNLG QPPKQYQIK  AQK+LENILETTLEVVEHS AIP
Subjt:  MGDRRNGGYGGDSSSGEEDGDAKWRAAIDSVAITSVFLSSLTNGLPATSTTTASNSDDHSELNLGAQPPKQYQIKVSAQKLLENILETTLEVVEHSIAIP

Query:  CDDSKPSEGGIRLFKNAPVGVVFDHV
        CDDSK SEGGIRLFKNAPVGVVFDH+
Subjt:  CDDSKPSEGGIRLFKNAPVGVVFDHV

XP_022946955.1 uncharacterized protein LOC111450982 [Cucurbita moschata]

1.0e-52

89.68

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Query:  MGDRRNGGYGGDSSSGEEDGDAKWRAAIDSVAITSVFLSSLTNGLPATSTTTASNSDDHSELNLGAQPPKQYQIKVSAQKLLENILETTLEVVEHSIAIP
        MGD+RNGGYGGDSSSGEEDGDA+WRAAIDSV  TSVFLSSLTNGLPATS TTASNSDD SELNLG QPPKQYQIK  AQK+LENILETTLEVVEHS AIP
Subjt:  MGDRRNGGYGGDSSSGEEDGDAKWRAAIDSVAITSVFLSSLTNGLPATSTTTASNSDDHSELNLGAQPPKQYQIKVSAQKLLENILETTLEVVEHSIAIP

Query:  CDDSKPSEGGIRLFKNAPVGVVFDHV
        CDDSK SEGGIRLFKNAPVGVVFDH+
Subjt:  CDDSKPSEGGIRLFKNAPVGVVFDHV

XP_023007376.1 uncharacterized protein LOC111499889 [Cucurbita maxima]

2.7e-53

90.48

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Query:  MGDRRNGGYGGDSSSGEEDGDAKWRAAIDSVAITSVFLSSLTNGLPATSTTTASNSDDHSELNLGAQPPKQYQIKVSAQKLLENILETTLEVVEHSIAIP
        MGD+RNGGYGGDSSSGEEDGDA+WRAAIDSV  TSVFLSSLTNGLPATSTTTASNSDD SELNLG QPPKQYQIK  AQK+LENILETTLEVVEHS AIP
Subjt:  MGDRRNGGYGGDSSSGEEDGDAKWRAAIDSVAITSVFLSSLTNGLPATSTTTASNSDDHSELNLGAQPPKQYQIKVSAQKLLENILETTLEVVEHSIAIP

Query:  CDDSKPSEGGIRLFKNAPVGVVFDHV
        CDDSK SEGGIRLFKNAPVGVVFDH+
Subjt:  CDDSKPSEGGIRLFKNAPVGVVFDHV

XP_023532576.1 uncharacterized protein LOC111794698 [Cucurbita pepo subsp. pepo]

2.7e-53

90.48

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Query:  MGDRRNGGYGGDSSSGEEDGDAKWRAAIDSVAITSVFLSSLTNGLPATSTTTASNSDDHSELNLGAQPPKQYQIKVSAQKLLENILETTLEVVEHSIAIP
        MGD+RNGGYGGDSSSGEEDGDA+WRAAIDSV  TSVFLSSLTNGLPATSTTTASNSDD SELNLG QPPKQYQIK  AQK+LENILETTLEVVEHS AIP
Subjt:  MGDRRNGGYGGDSSSGEEDGDAKWRAAIDSVAITSVFLSSLTNGLPATSTTTASNSDDHSELNLGAQPPKQYQIKVSAQKLLENILETTLEVVEHSIAIP

Query:  CDDSKPSEGGIRLFKNAPVGVVFDHV
        CDDSK SEGGIRLFKNAPVGVVFDH+
Subjt:  CDDSKPSEGGIRLFKNAPVGVVFDHV

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LMM8 Uncharacterized protein

1.2e-43

78.74

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Query:  MGDRRNGGYGGDSSSGEEDGDAKWRAAIDSVAITSVFLSSLTNGLPATSTTTASNSDDHSELNLGAQPPKQYQIKVSAQKLLENILETTLEVVEHSIAIP
        MGDRR+  +GGDSSSGEEDGDA+WR+AIDSVAI+SVF+SSLTNG+PATS  T S+SD+  E NL AQPPKQYQIK  AQKLL+NILETTLE+VEHS ++P
Subjt:  MGDRRNGGYGGDSSSGEEDGDAKWRAAIDSVAITSVFLSSLTNGLPATSTTTASNSDDHSELNLGAQPPKQYQIKVSAQKLLENILETTLEVVEHSIAIP

Query:  C-DDSKPSEGGIRLFKNAPVGVVFDHV
        C DDSK SEGGIRLFKNAPVGVVFDHV
Subjt:  C-DDSKPSEGGIRLFKNAPVGVVFDHV

A0A5A7TUM5 Glycoside hydrolase, family 43

1.2e-43

78.74

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Query:  MGDRRNGGYGGDSSSGEEDGDAKWRAAIDSVAITSVFLSSLTNGLPATSTTTASNSDDHSELNLGAQPPKQYQIKVSAQKLLENILETTLEVVEHSIAIP
        MGDRR+  +GGDSSSGEEDGDAKWRAAIDSV ++SVF+SSLTNG+PATS  T S  DD  ELNL AQPPK YQIK  AQKLL+NILETTLE+VEHS ++P
Subjt:  MGDRRNGGYGGDSSSGEEDGDAKWRAAIDSVAITSVFLSSLTNGLPATSTTTASNSDDHSELNLGAQPPKQYQIKVSAQKLLENILETTLEVVEHSIAIP

Query:  C-DDSKPSEGGIRLFKNAPVGVVFDHV
        C DDSK SEGGIRLFKNAPVGVVFDHV
Subjt:  C-DDSKPSEGGIRLFKNAPVGVVFDHV

A0A6J1D727 uncharacterized protein LOC111017872

2.3e-45

80.16

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Query:  MGDRRNGGYGGDSSSGEEDGDAKWRAAIDSVAITSVFLSSLTNGLPATSTTTASNSDDHSELNLGAQPPKQYQIKVSAQKLLENILETTLEVVEHSIAIP
        M DRRNGGYGGDSSSGEEDGDA+WRAAIDSVA +SVF+SSLTNG+P TSTT AS S+D SELNL A PPKQYQIK  A+K+LENILETTLEVVEH I++P
Subjt:  MGDRRNGGYGGDSSSGEEDGDAKWRAAIDSVAITSVFLSSLTNGLPATSTTTASNSDDHSELNLGAQPPKQYQIKVSAQKLLENILETTLEVVEHSIAIP

Query:  CDDSKPSEGGIRLFKNAPVGVVFDHV
         DDSK   GGIRLFKNAP+GVVFDHV
Subjt:  CDDSKPSEGGIRLFKNAPVGVVFDHV

A0A6J1G5G9 uncharacterized protein LOC111450982

5.1e-53

89.68

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Query:  MGDRRNGGYGGDSSSGEEDGDAKWRAAIDSVAITSVFLSSLTNGLPATSTTTASNSDDHSELNLGAQPPKQYQIKVSAQKLLENILETTLEVVEHSIAIP
        MGD+RNGGYGGDSSSGEEDGDA+WRAAIDSV  TSVFLSSLTNGLPATS TTASNSDD SELNLG QPPKQYQIK  AQK+LENILETTLEVVEHS AIP
Subjt:  MGDRRNGGYGGDSSSGEEDGDAKWRAAIDSVAITSVFLSSLTNGLPATSTTTASNSDDHSELNLGAQPPKQYQIKVSAQKLLENILETTLEVVEHSIAIP

Query:  CDDSKPSEGGIRLFKNAPVGVVFDHV
        CDDSK SEGGIRLFKNAPVGVVFDH+
Subjt:  CDDSKPSEGGIRLFKNAPVGVVFDHV

A0A6J1L0C9 uncharacterized protein LOC111499889

1.3e-53

90.48

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Query:  MGDRRNGGYGGDSSSGEEDGDAKWRAAIDSVAITSVFLSSLTNGLPATSTTTASNSDDHSELNLGAQPPKQYQIKVSAQKLLENILETTLEVVEHSIAIP
        MGD+RNGGYGGDSSSGEEDGDA+WRAAIDSV  TSVFLSSLTNGLPATSTTTASNSDD SELNLG QPPKQYQIK  AQK+LENILETTLEVVEHS AIP
Subjt:  MGDRRNGGYGGDSSSGEEDGDAKWRAAIDSVAITSVFLSSLTNGLPATSTTTASNSDDHSELNLGAQPPKQYQIKVSAQKLLENILETTLEVVEHSIAIP

Query:  CDDSKPSEGGIRLFKNAPVGVVFDHV
        CDDSK SEGGIRLFKNAPVGVVFDH+
Subjt:  CDDSKPSEGGIRLFKNAPVGVVFDHV

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT3G49890.1 unknown protein

1.3e-13

41.88

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Query:  GGDSSSGEEDGDAKWRAAIDSVAITSVFLSSLTNGLPATSTTTASNSDDHSELNLGAQPPKQYQIKVSAQKLLENILETTLEVVEHSIAIPCDDSKPSEG
        GGDSSS  ED D KWRAAI+S+A T+V+ +S T   PA     A+ S ++ +  L  +P K    ++  + LL  ++E TL+ VE  + IP +D   ++ 
Subjt:  GGDSSSGEEDGDAKWRAAIDSVAITSVFLSSLTNGLPATSTTTASNSDDHSELNLGAQPPKQYQIKVSAQKLLENILETTLEVVEHSIAIPCDDSKPSEG

Query:  GIRLFKNAPVGVVFDHV
        G+RLFK    G+VFDHV
Subjt:  GIRLFKNAPVGVVFDHV

Sequences

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CDS sequence

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ATGGGTGATCGGAGAAACGGCGGCTATGGTGGCGACAGCAGCAGCGGAGAGGAAGATGGTGACGCCAAATGGAGAGCCGCCATCGACTCTGTCGCTATCACGTCGGTGTT
TTTATCGTCGTTAACTAATGGTCTTCCTGCTACTTCAACGACCACTGCTTCAAACTCGGACGATCATTCTGAGCTTAATCTCGGTGCTCAGCCGCCCAAGCAATATCAAA
TCAAGGTCTCGGCACAGAAGCTGTTGGAGAATATTTTGGAAACTACTCTAGAGGTGGTAGAACATTCCATAGCTATTCCTTGTGATGATTCCAAGCCCAGTGAAGGTGGA
ATTCGTTTGTTTAAAAATGCTCCCGTTGGGGTTGTGTTTGATCACGTGGGGTGTCCCACGATAGCTGATTTTAGGAGAGTGAACATGTCTCCCGGCCTAGCCATTTGCCA
TCCAAAGGCATGCTGTATAGTGTCCCAGAAAACAGCCACATATGAACACAAGCTGAAGAGGTGA

mRNA sequence

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Protein sequence

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MGDRRNGGYGGDSSSGEEDGDAKWRAAIDSVAITSVFLSSLTNGLPATSTTTASNSDDHSELNLGAQPPKQYQIKVSAQKLLENILETTLEVVEHSIAIPCDDSKPSEGG
IRLFKNAPVGVVFDHVGCPTIADFRRVNMSPGLAICHPKACCIVSQKTATYEHKLKR

Spg028300 (gene) of Sponge gourd (cylindrica) v1 genome