; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg028318 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg028318
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionCCHC-type domain-containing protein
Genome locationscaffold8:27085148..27089483
RNA-Seq ExpressionSpg028318
SyntenySpg028318
Gene Ontology termsNA
InterPro domainsIPR008889 - VQ
IPR025558 - Domain of unknown function DUF4283
IPR039610 - VQ motif-containing protein 29


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0045761.1 VQ motif-containing protein 29 [Cucumis melo var. makuwa]3.7e-1758.88Show/hide
Query:  MDPHSSSSFYYSEPDEVRKPPARLFKKAVAPPPPMPPRVYKVDPINFRDVVQKLTAPPEFQDRRLQSMPAPRPNPSNQPPRSAARRDFPGEGSVSYNGGI
        M+PHS S +Y  +   V+K      KKAVAPP P PP+VYKVDPINFRDVVQKLTA PEFQDRRLQ+MP PRPN ++Q  R    RD  GEG     GG+
Subjt:  MDPHSSSSFYYSEPDEVRKPPARLFKKAVAPPPPMPPRVYKVDPINFRDVVQKLTAPPEFQDRRLQSMPAPRPNPSNQPPRSAARRDFPGEGSVSYNGGI

Query:  VIVFGGF
        V   G F
Subjt:  VIVFGGF

KAG6605217.1 hypothetical protein SDJN03_02534, partial [Cucurbita argyrosperma subsp. sororia]6.6e-2268.13Show/hide
Query:  MDPH------SSSSFYYSEPDEVRKPPARLFKKAVAPPPPMPPRVYKVDPINFRDVVQKLTAPPEFQDRRLQSMPAPRPNPSNQPPRSAAR
        M+PH      SS SFYYS+PD V K  +R  KKAVAPPPPMPPRVYKV+PI FRDVVQKLT+PPE+ D RL++MPAPRPN SN PP S+ R
Subjt:  MDPH------SSSSFYYSEPDEVRKPPARLFKKAVAPPPPMPPRVYKVDPINFRDVVQKLTAPPEFQDRRLQSMPAPRPNPSNQPPRSAAR

XP_022149484.1 uncharacterized protein LOC111017902 [Momordica charantia]7.5e-1845.71Show/hide
Query:  WKSLKLTEDEAEIVRVDTIPRVLPAESIDLCVYSKVLSSKKINLDVFRSVMKSVWRVHGATRIELAGDNVFAIQFHTKGEKLRVMGSGPQAFDRSLIVMK
        W+  K T DE E V +D    +L A+++ LCV +K+ +SK+I+ +  RSVMKSVWRVH +TR E  G N++ I F +  EK RV+ SGP  F++SL+V+ 
Subjt:  WKSLKLTEDEAEIVRVDTIPRVLPAESIDLCVYSKVLSSKKINLDVFRSVMKSVWRVHGATRIELAGDNVFAIQFHTKGEKLRVMGSGPQAFDRSLIVMK

Query:  EPVGT
         P  T
Subjt:  EPVGT

XP_022149539.1 VQ motif-containing protein 29 [Momordica charantia]5.2e-1960.2Show/hide
Query:  MDPHSSSSFYYSEPDEVRKPPARLFKKAVAPPPPMPPRVYKVDPINFRDVVQKLTAPPEFQDRRLQSMPAPRPNPSNQPPRSAARRDFPGEGSVSYNG
        M+PHSSSS           P  + + +AVAP PP PP++YKV+P++FRDVVQKLTA PEFQDRRLQ+MPAPRP+P   PP SAA  DF GEG+V Y G
Subjt:  MDPHSSSSFYYSEPDEVRKPPARLFKKAVAPPPPMPPRVYKVDPINFRDVVQKLTAPPEFQDRRLQSMPAPRPNPSNQPPRSAARRDFPGEGSVSYNG

XP_022158119.1 uncharacterized protein LOC111024676, partial [Momordica charantia]4.1e-1646.08Show/hide
Query:  WKSLKLTEDEAEIVRVDTIPRVLPAESIDLCVYSKVLSSKKINLDVFRSVMKSVWRVHGATRIELAGDNVFAIQFHTKGEKLRVMGSGPQAFDRSLIVMK
        W++  LT +E E   VD    +L AE+I LC   K+ +SK+I+     SVMK VW++H +TRIE AG N++ I F T  EK RV+ SGP  FD+SL V+ 
Subjt:  WKSLKLTEDEAEIVRVDTIPRVLPAESIDLCVYSKVLSSKKINLDVFRSVMKSVWRVHGATRIELAGDNVFAIQFHTKGEKLRVMGSGPQAFDRSLIVMK

Query:  EP
         P
Subjt:  EP

TrEMBL top hitse value%identityAlignment
A0A5A7TW54 VQ motif-containing protein 291.8e-1758.88Show/hide
Query:  MDPHSSSSFYYSEPDEVRKPPARLFKKAVAPPPPMPPRVYKVDPINFRDVVQKLTAPPEFQDRRLQSMPAPRPNPSNQPPRSAARRDFPGEGSVSYNGGI
        M+PHS S +Y  +   V+K      KKAVAPP P PP+VYKVDPINFRDVVQKLTA PEFQDRRLQ+MP PRPN ++Q  R    RD  GEG     GG+
Subjt:  MDPHSSSSFYYSEPDEVRKPPARLFKKAVAPPPPMPPRVYKVDPINFRDVVQKLTAPPEFQDRRLQSMPAPRPNPSNQPPRSAARRDFPGEGSVSYNGGI

Query:  VIVFGGF
        V   G F
Subjt:  VIVFGGF

A0A6J1D765 uncharacterized protein LOC1110179023.6e-1845.71Show/hide
Query:  WKSLKLTEDEAEIVRVDTIPRVLPAESIDLCVYSKVLSSKKINLDVFRSVMKSVWRVHGATRIELAGDNVFAIQFHTKGEKLRVMGSGPQAFDRSLIVMK
        W+  K T DE E V +D    +L A+++ LCV +K+ +SK+I+ +  RSVMKSVWRVH +TR E  G N++ I F +  EK RV+ SGP  F++SL+V+ 
Subjt:  WKSLKLTEDEAEIVRVDTIPRVLPAESIDLCVYSKVLSSKKINLDVFRSVMKSVWRVHGATRIELAGDNVFAIQFHTKGEKLRVMGSGPQAFDRSLIVMK

Query:  EPVGT
         P  T
Subjt:  EPVGT

A0A6J1D7B4 VQ motif-containing protein 292.5e-1960.2Show/hide
Query:  MDPHSSSSFYYSEPDEVRKPPARLFKKAVAPPPPMPPRVYKVDPINFRDVVQKLTAPPEFQDRRLQSMPAPRPNPSNQPPRSAARRDFPGEGSVSYNG
        M+PHSSSS           P  + + +AVAP PP PP++YKV+P++FRDVVQKLTA PEFQDRRLQ+MPAPRP+P   PP SAA  DF GEG+V Y G
Subjt:  MDPHSSSSFYYSEPDEVRKPPARLFKKAVAPPPPMPPRVYKVDPINFRDVVQKLTAPPEFQDRRLQSMPAPRPNPSNQPPRSAARRDFPGEGSVSYNG

A0A6J1DVS4 uncharacterized protein LOC1110235559.9e-1640.4Show/hide
Query:  WKSLKLTEDEAEIVRVDTIPRVLPAESIDLCVYSKVLSSKKINLDVFRSVMKSVWRVHGATRIELAGDNVFAIQFHTKGEKLRVMGSGPQAFDRSLIVM
        W++  L ++E + + +D    +L  ++I LC   K+  SK+I ++ F SVMK VW++H +TRIE AG N++ I F T  EK+RV   GP  FD+SL+++
Subjt:  WKSLKLTEDEAEIVRVDTIPRVLPAESIDLCVYSKVLSSKKINLDVFRSVMKSVWRVHGATRIELAGDNVFAIQFHTKGEKLRVMGSGPQAFDRSLIVM

A0A6J1DYG3 uncharacterized protein LOC1110246762.0e-1646.08Show/hide
Query:  WKSLKLTEDEAEIVRVDTIPRVLPAESIDLCVYSKVLSSKKINLDVFRSVMKSVWRVHGATRIELAGDNVFAIQFHTKGEKLRVMGSGPQAFDRSLIVMK
        W++  LT +E E   VD    +L AE+I LC   K+ +SK+I+     SVMK VW++H +TRIE AG N++ I F T  EK RV+ SGP  FD+SL V+ 
Subjt:  WKSLKLTEDEAEIVRVDTIPRVLPAESIDLCVYSKVLSSKKINLDVFRSVMKSVWRVHGATRIELAGDNVFAIQFHTKGEKLRVMGSGPQAFDRSLIVMK

Query:  EP
         P
Subjt:  EP

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGACCCTCACTCTTCTTCTTCTTTTTACTACTCGGAGCCGGACGAGGTTCGAAAGCCGCCGGCGAGGCTGTTCAAGAAGGCGGTCGCGCCTCCGCCGCCGATGCCGCC
GCGGGTTTACAAGGTGGACCCCATCAACTTCCGGGATGTCGTTCAGAAGCTAACTGCCCCGCCTGAGTTTCAAGATCGCCGCCTTCAATCCATGCCGGCTCCCCGGCCGA
ACCCCTCCAATCAGCCGCCCCGGTCTGCAGCCCGTCGGGATTTTCCCGGCGAGGGATCCGTTTCTTACAATGGCGGGATTGTGATTGTCTTCGGTGGGTTTGCGATTGTC
TTCGGTGGAGTCCTGATCGCCGACGGGGTTTCTTTCTGTCCTGGTGCGAGGGTCTGGTACCAGAAGTGGAAATCGTTGAAACTGACAGAAGATGAAGCGGAGATCGTCAG
AGTCGACACGATACCGAGGGTTCTTCCAGCGGAGTCCATTGACCTATGTGTTTACAGTAAGGTCTTGTCGTCAAAGAAGATTAACCTTGATGTGTTCCGGTCAGTGATGA
AATCTGTATGGAGGGTTCATGGGGCGACAAGGATTGAGTTGGCAGGGGATAATGTTTTTGCTATCCAGTTCCACACGAAAGGGGAGAAGCTTCGTGTCATGGGCTCGGGT
CCGCAGGCCTTTGATCGGTCGTTAATTGTGATGAAGGAACCGGTTGGGACGCTTTCAGTTGCTTCCGTTGAAACAGTATGGGGAGTGGATGAGGGCGGGAATGTGGGTAG
GGGAGGTGGGAAAGAGAGGGGGGATGAGAGGAGGGAAGGCCTTAACGCTGATAGGCAGAAGGAAAGTGAGGGGGAGAAGGGTGAGGCGCCCATTGGGGGGGTTAATCTTG
GGGGTGAGGGCCAATCTAAGACGGTGGCTGTCGAAGTGGGAAGTCCGGAGGCTCAGGCCGGTGGGAAAGGGAAGGAGAAGGTTGGGTTGGGGGGGATAATGGAGGAGAGT
AGGGGTGAGGGAGCAATGGAAGTTGATGGGGTAGTGGGTAATCAGTCTGATGGGATGACTGAAATAGGGAATGTGCAGAAAGGGAAGGGTTGGAAGAGGAGAGCTCGAAA
TGCCTTGACAGATGTCACAAACACAGTTGAGAGTGCTAAGAGTTTGGGTCCCAAACGGAAAGCTCCCACAGTTTCTTCTGGTTTGCAGGGGAGCAAGAAGGCTAGAAGTG
ATAGTATCCCTGAAGAAAGTAGTGGTTTGGGTGTGGAGACTATCTTTGGGATGTTGATTATTGATAATGTGGCGGTGGCTGGGGACCAGCCCCGCCATTCGCCATGA
mRNA sequenceShow/hide mRNA sequence
ATGGACCCTCACTCTTCTTCTTCTTTTTACTACTCGGAGCCGGACGAGGTTCGAAAGCCGCCGGCGAGGCTGTTCAAGAAGGCGGTCGCGCCTCCGCCGCCGATGCCGCC
GCGGGTTTACAAGGTGGACCCCATCAACTTCCGGGATGTCGTTCAGAAGCTAACTGCCCCGCCTGAGTTTCAAGATCGCCGCCTTCAATCCATGCCGGCTCCCCGGCCGA
ACCCCTCCAATCAGCCGCCCCGGTCTGCAGCCCGTCGGGATTTTCCCGGCGAGGGATCCGTTTCTTACAATGGCGGGATTGTGATTGTCTTCGGTGGGTTTGCGATTGTC
TTCGGTGGAGTCCTGATCGCCGACGGGGTTTCTTTCTGTCCTGGTGCGAGGGTCTGGTACCAGAAGTGGAAATCGTTGAAACTGACAGAAGATGAAGCGGAGATCGTCAG
AGTCGACACGATACCGAGGGTTCTTCCAGCGGAGTCCATTGACCTATGTGTTTACAGTAAGGTCTTGTCGTCAAAGAAGATTAACCTTGATGTGTTCCGGTCAGTGATGA
AATCTGTATGGAGGGTTCATGGGGCGACAAGGATTGAGTTGGCAGGGGATAATGTTTTTGCTATCCAGTTCCACACGAAAGGGGAGAAGCTTCGTGTCATGGGCTCGGGT
CCGCAGGCCTTTGATCGGTCGTTAATTGTGATGAAGGAACCGGTTGGGACGCTTTCAGTTGCTTCCGTTGAAACAGTATGGGGAGTGGATGAGGGCGGGAATGTGGGTAG
GGGAGGTGGGAAAGAGAGGGGGGATGAGAGGAGGGAAGGCCTTAACGCTGATAGGCAGAAGGAAAGTGAGGGGGAGAAGGGTGAGGCGCCCATTGGGGGGGTTAATCTTG
GGGGTGAGGGCCAATCTAAGACGGTGGCTGTCGAAGTGGGAAGTCCGGAGGCTCAGGCCGGTGGGAAAGGGAAGGAGAAGGTTGGGTTGGGGGGGATAATGGAGGAGAGT
AGGGGTGAGGGAGCAATGGAAGTTGATGGGGTAGTGGGTAATCAGTCTGATGGGATGACTGAAATAGGGAATGTGCAGAAAGGGAAGGGTTGGAAGAGGAGAGCTCGAAA
TGCCTTGACAGATGTCACAAACACAGTTGAGAGTGCTAAGAGTTTGGGTCCCAAACGGAAAGCTCCCACAGTTTCTTCTGGTTTGCAGGGGAGCAAGAAGGCTAGAAGTG
ATAGTATCCCTGAAGAAAGTAGTGGTTTGGGTGTGGAGACTATCTTTGGGATGTTGATTATTGATAATGTGGCGGTGGCTGGGGACCAGCCCCGCCATTCGCCATGA
Protein sequenceShow/hide protein sequence
MDPHSSSSFYYSEPDEVRKPPARLFKKAVAPPPPMPPRVYKVDPINFRDVVQKLTAPPEFQDRRLQSMPAPRPNPSNQPPRSAARRDFPGEGSVSYNGGIVIVFGGFAIV
FGGVLIADGVSFCPGARVWYQKWKSLKLTEDEAEIVRVDTIPRVLPAESIDLCVYSKVLSSKKINLDVFRSVMKSVWRVHGATRIELAGDNVFAIQFHTKGEKLRVMGSG
PQAFDRSLIVMKEPVGTLSVASVETVWGVDEGGNVGRGGGKERGDERREGLNADRQKESEGEKGEAPIGGVNLGGEGQSKTVAVEVGSPEAQAGGKGKEKVGLGGIMEES
RGEGAMEVDGVVGNQSDGMTEIGNVQKGKGWKRRARNALTDVTNTVESAKSLGPKRKAPTVSSGLQGSKKARSDSIPEESSGLGVETIFGMLIIDNVAVAGDQPRHSP