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Spg028385 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg028385
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
Descriptionomega-amidase, chloroplastic
Genome locationscaffold8:26895573..26898892
RNA-Seq ExpressionSpg028385
SyntenySpg028385
Gene Ontology termsGO:0006107 - oxaloacetate metabolic process (biological process)
GO:0006528 - asparagine metabolic process (biological process)
GO:0006541 - glutamine metabolic process (biological process)
GO:0016021 - integral component of membrane (cellular component)
GO:0016740 - transferase activity (molecular function)
GO:0050152 - omega-amidase activity (molecular function)
InterPro domainsIPR036526 - Carbon-nitrogen hydrolase superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6608344.1 Omega-amidase, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia]6.8e-0973.91Show/hide
Query:  VGGSIAERSGDKLYNACCVFGTDGKLKAKHKKFMHKVELVGFGRIT
        VGGSIAERSGDKLYNACC+FGTDGKLKAKH+K +H  ++   G+IT
Subjt:  VGGSIAERSGDKLYNACCVFGTDGKLKAKHKKFMHKVELVGFGRIT
XP_022134239.1 omega-amidase, chloroplastic [Momordica charantia]1.2e-0873.91Show/hide
Query:  VGGSIAERSGDKLYNACCVFGTDGKLKAKHKKFMHKVELVGFGRIT
        VGGSIAERSGD+LYNACCVFGTDGKLKAKH+K +H  ++   G+IT
Subjt:  VGGSIAERSGDKLYNACCVFGTDGKLKAKHKKFMHKVELVGFGRIT
XP_022940145.1 omega-amidase, chloroplastic [Cucurbita moschata]6.8e-0973.91Show/hide
Query:  VGGSIAERSGDKLYNACCVFGTDGKLKAKHKKFMHKVELVGFGRIT
        VGGSIAERSGDKLYNACC+FGTDGKLKAKH+K +H  ++   G+IT
Subjt:  VGGSIAERSGDKLYNACCVFGTDGKLKAKHKKFMHKVELVGFGRIT
XP_022982376.1 omega-amidase, chloroplastic [Cucurbita maxima]6.8e-0973.91Show/hide
Query:  VGGSIAERSGDKLYNACCVFGTDGKLKAKHKKFMHKVELVGFGRIT
        VGGSIAERSGDKLYNACC+FGTDGKLKAKH+K +H  ++   G+IT
Subjt:  VGGSIAERSGDKLYNACCVFGTDGKLKAKHKKFMHKVELVGFGRIT
XP_023524248.1 omega-amidase, chloroplastic [Cucurbita pepo subsp. pepo]6.8e-0973.91Show/hide
Query:  VGGSIAERSGDKLYNACCVFGTDGKLKAKHKKFMHKVELVGFGRIT
        VGGSIAERSGDKLYNACC+FGTDGKLKAKH+K +H  ++   G+IT
Subjt:  VGGSIAERSGDKLYNACCVFGTDGKLKAKHKKFMHKVELVGFGRIT
TrEMBL top hitse value%identityAlignment
A0A097PL26 Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase family protein (Fragment)3.7e-0860.38Show/hide
Query:  CIEMSHFVGGSIAERSGDKLYNACCVFGTDGKLKAKHKKFMHKVELVGFGRIT
        C      VGGSI ERSGD+LYN CC+FGTDGKLKAKH+K +H  ++   G+IT
Subjt:  CIEMSHFVGGSIAERSGDKLYNACCVFGTDGKLKAKHKKFMHKVELVGFGRIT
A0A5D2PQF7 CN hydrolase domain-containing protein3.7e-0871.74Show/hide
Query:  VGGSIAERSGDKLYNACCVFGTDGKLKAKHKKFMHKVELVGFGRIT
        VGGSI ER GDKLYNACCVFGTDGKLKAKH+K +H  ++   G+IT
Subjt:  VGGSIAERSGDKLYNACCVFGTDGKLKAKHKKFMHKVELVGFGRIT
A0A6J1BY88 omega-amidase, chloroplastic5.6e-0973.91Show/hide
Query:  VGGSIAERSGDKLYNACCVFGTDGKLKAKHKKFMHKVELVGFGRIT
        VGGSIAERSGD+LYNACCVFGTDGKLKAKH+K +H  ++   G+IT
Subjt:  VGGSIAERSGDKLYNACCVFGTDGKLKAKHKKFMHKVELVGFGRIT
A0A6J1FPQ5 omega-amidase, chloroplastic3.3e-0973.91Show/hide
Query:  VGGSIAERSGDKLYNACCVFGTDGKLKAKHKKFMHKVELVGFGRIT
        VGGSIAERSGDKLYNACC+FGTDGKLKAKH+K +H  ++   G+IT
Subjt:  VGGSIAERSGDKLYNACCVFGTDGKLKAKHKKFMHKVELVGFGRIT
A0A6J1IZ64 omega-amidase, chloroplastic3.3e-0973.91Show/hide
Query:  VGGSIAERSGDKLYNACCVFGTDGKLKAKHKKFMHKVELVGFGRIT
        VGGSIAERSGDKLYNACC+FGTDGKLKAKH+K +H  ++   G+IT
Subjt:  VGGSIAERSGDKLYNACCVFGTDGKLKAKHKKFMHKVELVGFGRIT
SwissProt top hitse value%identityAlignment
Q4VBV9 Omega-amidase NIT22.4e-0446Show/hide
Query:  HFVGGSIAERSGDKLYNACCVFGTDGKLKAKHKKFMHKVELVGFGRITIE
        + VGGSI E  G KLYN C VFG DG L   H+K +H  ++   G+I  +
Subjt:  HFVGGSIAERSGDKLYNACCVFGTDGKLKAKHKKFMHKVELVGFGRITIE
Q8RUF8 Omega-amidase, chloroplastic9.3e-0960.87Show/hide
Query:  VGGSIAERSGDKLYNACCVFGTDGKLKAKHKKFMHKVELVGFGRIT
        +GGSI ER GD+LYN CCVFG+DG+LKAKH+K +H  ++   G+IT
Subjt:  VGGSIAERSGDKLYNACCVFGTDGKLKAKHKKFMHKVELVGFGRIT
Arabidopsis top hitse value%identityAlignment
AT5G12040.1 Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase family protein6.6e-1060.87Show/hide
Query:  VGGSIAERSGDKLYNACCVFGTDGKLKAKHKKFMHKVELVGFGRIT
        +GGSI ER GD+LYN CCVFG+DG+LKAKH+K +H  ++   G+IT
Subjt:  VGGSIAERSGDKLYNACCVFGTDGKLKAKHKKFMHKVELVGFGRIT
AT5G12040.2 Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase family protein6.6e-1060.87Show/hide
Query:  VGGSIAERSGDKLYNACCVFGTDGKLKAKHKKFMHKVELVGFGRIT
        +GGSI ER GD+LYN CCVFG+DG+LKAKH+K +H  ++   G+IT
Subjt:  VGGSIAERSGDKLYNACCVFGTDGKLKAKHKKFMHKVELVGFGRIT

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGTTCCATTAGCCGTGGATGTTTCTGTTTTCTAGTGGGTCGAGTTGTTTTCGCTGTGGGTCGTGTTCTCCATGGGTCTTGTTCGTCGTGGGTAGTAGATCTGAAGCC
GTGGAGGTCGTGGGTGGTAGATCTGGCGTTATTGATAGTAGATCTAAGTCGGAGAGCCAATGTTGGTTTTTCTGTGAAATTCATGATTGGTGATTCTATGATGATAAGCA
TGATGTCTACTTTAACATTGACTTCTAGGAGCGAATGCAAGGGAGATGGCAGAATTCATGTTGAAGCTGCTAGTCAATTAGTGGGAAGGAAGATTTGTATGATGTTTGGA
GACTACAGTTTTTTGTTTCAAAACTGCTTGCATGAAGGAAAAATTGGTTGGAGTAGAAAATTTTACAGCCTTTTGTGCATAGAGATGAGTCACTTTGTTGGGGGCTCAAT
TGCAGAGCGCTCAGGGGATAAGTTGTATAATGCTTGTTGTGTCTTTGGTACTGACGGAAAGCTGAAGGCTAAACACAAGAAGTTTATGCATAAAGTTGAGTTAGTTGGCT
TTGGAAGGATAACGATTGAAGCAATGGCGTTTCAGTTGCCTGTGATCTTTCATTTACTTGTGCTGCTTTGGAGAGTTTTGTAA
mRNA sequenceShow/hide mRNA sequence
ATGGGTTCCATTAGCCGTGGATGTTTCTGTTTTCTAGTGGGTCGAGTTGTTTTCGCTGTGGGTCGTGTTCTCCATGGGTCTTGTTCGTCGTGGGTAGTAGATCTGAAGCC
GTGGAGGTCGTGGGTGGTAGATCTGGCGTTATTGATAGTAGATCTAAGTCGGAGAGCCAATGTTGGTTTTTCTGTGAAATTCATGATTGGTGATTCTATGATGATAAGCA
TGATGTCTACTTTAACATTGACTTCTAGGAGCGAATGCAAGGGAGATGGCAGAATTCATGTTGAAGCTGCTAGTCAATTAGTGGGAAGGAAGATTTGTATGATGTTTGGA
GACTACAGTTTTTTGTTTCAAAACTGCTTGCATGAAGGAAAAATTGGTTGGAGTAGAAAATTTTACAGCCTTTTGTGCATAGAGATGAGTCACTTTGTTGGGGGCTCAAT
TGCAGAGCGCTCAGGGGATAAGTTGTATAATGCTTGTTGTGTCTTTGGTACTGACGGAAAGCTGAAGGCTAAACACAAGAAGTTTATGCATAAAGTTGAGTTAGTTGGCT
TTGGAAGGATAACGATTGAAGCAATGGCGTTTCAGTTGCCTGTGATCTTTCATTTACTTGTGCTGCTTTGGAGAGTTTTGTAA
Protein sequenceShow/hide protein sequence
MGSISRGCFCFLVGRVVFAVGRVLHGSCSSWVVDLKPWRSWVVDLALLIVDLSRRANVGFSVKFMIGDSMMISMMSTLTLTSRSECKGDGRIHVEAASQLVGRKICMMFG
DYSFLFQNCLHEGKIGWSRKFYSLLCIEMSHFVGGSIAERSGDKLYNACCVFGTDGKLKAKHKKFMHKVELVGFGRITIEAMAFQLPVIFHLLVLLWRVL