; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg028410 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg028410
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionReverse transcriptase domain-containing protein
Genome locationscaffold7:15037211..15044630
RNA-Seq ExpressionSpg028410
SyntenySpg028410
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
PON35554.1 hypothetical protein PanWU01x14_335450, partial [Parasponia andersonii]1.1e-0932.26Show/hide
Query:  VMVRDNTVTFAPNVINVAFKLSDIPNAEGNALLSSQDEDFLAAALASVARRGAQWD--GRGATRTLKAQLLDFEPTFWMHWTKNRIMPTTHDATLSIPLV
        V VR   V+++   IN  F L D P  E +  + +  E  L   L +VA  GA+W+   +GA   +++ L       W H+ K+ ++PTTH  T+S   +
Subjt:  VMVRDNTVTFAPNVINVAFKLSDIPNAEGNALLSSQDEDFLAAALASVARRGAQWD--GRGATRTLKAQLLDFEPTFWMHWTKNRIMPTTHDATLSIPLV

Query:  VLVYCIIKGIPIDLGQILCS-LRQTAYKPKGAMFCPGLVTRLCHMAGLLLTASEE
        +L++ ++ G  I++G+++ S +R  A +  GA+F P L+TRLC  A      +EE
Subjt:  VLVYCIIKGIPIDLGQILCS-LRQTAYKPKGAMFCPGLVTRLCHMAGLLLTASEE

PON46472.1 hypothetical protein PanWU01x14_251180, partial [Parasponia andersonii]2.9e-1032.08Show/hide
Query:  EIDEVMVRDNTVTFAPNVINVAFKLSDIPNAEGNALLSSQDEDFLAAALASVARRGAQWD--GRGATRTLKAQLLDFEPTFWMHWTKNRIMPTTHDATLS
        E + V VR   V+++   IN  F L D P  E +  + +  +  L   L +VA  GA+W+   +GA   +++ L       W H+ K+R++PTTH  T+S
Subjt:  EIDEVMVRDNTVTFAPNVINVAFKLSDIPNAEGNALLSSQDEDFLAAALASVARRGAQWD--GRGATRTLKAQLLDFEPTFWMHWTKNRIMPTTHDATLS

Query:  IPLVVLVYCIIKGIPIDLGQILCS-LRQTAYKPKGAMFCPGLVTRLCHMAGLLLTASEE
           ++L++ ++ G  I++G+++ S +R  A +  GA+F P L+TRLC  A      +EE
Subjt:  IPLVVLVYCIIKGIPIDLGQILCS-LRQTAYKPKGAMFCPGLVTRLCHMAGLLLTASEE

PON62892.1 hypothetical protein PanWU01x14_135680 [Parasponia andersonii]1.7e-1034.39Show/hide
Query:  DEVMVRDNTVTFAPNVINVAFKLSDIPNAEGNALLSSQDEDFLAAALASVARRGAQWD--GRGATRTLKAQLLDFEPTFWMHWTKNRIMPTTHDATLSIP
        D V VR   V  +   IN  + L D P  E +  + +  E  LA  L +VA  GA+W+   +GA   L++  L+     W H+ K+R++PTTH  T+S  
Subjt:  DEVMVRDNTVTFAPNVINVAFKLSDIPNAEGNALLSSQDEDFLAAALASVARRGAQWD--GRGATRTLKAQLLDFEPTFWMHWTKNRIMPTTHDATLSIP

Query:  LVVLVYCIIKGIPIDLGQIL-CSLRQTAYKPKGAMFCPGLVTRLCHMAGLLLTASEE
         V+L+Y ++ G  I++GQI+   +   A +  GA+F P L+TR+C  A      +EE
Subjt:  LVVLVYCIIKGIPIDLGQIL-CSLRQTAYKPKGAMFCPGLVTRLCHMAGLLLTASEE

PON78020.1 hypothetical protein PanWU01x14_023740 [Parasponia andersonii]1.1e-0931.82Show/hide
Query:  EIDEVMVRDNTVTFAPNVINVAFKLSDIPNAEGNALLSSQDEDFLAAALASVARRGAQWD--GRGATRTLKAQLLDFEPTFWMHWTKNRIMPTTHDATLS
        E + + VR   V+++   IN  F L D P  E +  + +  E  L   L +VA  GA+W+   +GA   +++ L       W H+ K+R++PTTH   +S
Subjt:  EIDEVMVRDNTVTFAPNVINVAFKLSDIPNAEGNALLSSQDEDFLAAALASVARRGAQWD--GRGATRTLKAQLLDFEPTFWMHWTKNRIMPTTHDATLS

Query:  IPLVVLVYCIIKGIPIDLGQILCS-LRQTAYKPKGAMFCPGLVTRLCHMAGLLL
           ++L++ ++ G  I++G+++ S +R  A +  GA+F P L+TRLC  A  L+
Subjt:  IPLVVLVYCIIKGIPIDLGQILCS-LRQTAYKPKGAMFCPGLVTRLCHMAGLLL

XP_038904385.1 uncharacterized protein LOC120090747 [Benincasa hispida]1.3e-1033.08Show/hide
Query:  DEVMVRDNTVTFAPNVINVAFKLSDIPNAEGNALLSSQDEDFLAAALASVARRGAQWD-GRGATRTLKAQLLDFEPTFWMHWTKNRIMPTTHDATLSIPL
        D V+++   V F+   IN  +K+ DIP+A GN ++    E+ +  AL ++ + G QW       +TL +  L  E   W++  K RI+PT+HD T+S   
Subjt:  DEVMVRDNTVTFAPNVINVAFKLSDIPNAEGNALLSSQDEDFLAAALASVARRGAQWD-GRGATRTLKAQLLDFEPTFWMHWTKNRIMPTTHDATLSIPL

Query:  VVLVYCIIKGIPIDLGQILCSLRQTAYKPK
        V+  YCI  GI ID+  ++ +  + A + K
Subjt:  VVLVYCIIKGIPIDLGQILCSLRQTAYKPK

TrEMBL top hitse value%identityAlignment
A0A2P5AGA5 Uncharacterized protein (Fragment)5.3e-1032.26Show/hide
Query:  VMVRDNTVTFAPNVINVAFKLSDIPNAEGNALLSSQDEDFLAAALASVARRGAQWD--GRGATRTLKAQLLDFEPTFWMHWTKNRIMPTTHDATLSIPLV
        V VR   V+++   IN  F L D P  E +  + +  E  L   L +VA  GA+W+   +GA   +++ L       W H+ K+ ++PTTH  T+S   +
Subjt:  VMVRDNTVTFAPNVINVAFKLSDIPNAEGNALLSSQDEDFLAAALASVARRGAQWD--GRGATRTLKAQLLDFEPTFWMHWTKNRIMPTTHDATLSIPLV

Query:  VLVYCIIKGIPIDLGQILCS-LRQTAYKPKGAMFCPGLVTRLCHMAGLLLTASEE
        +L++ ++ G  I++G+++ S +R  A +  GA+F P L+TRLC  A      +EE
Subjt:  VLVYCIIKGIPIDLGQILCS-LRQTAYKPKGAMFCPGLVTRLCHMAGLLLTASEE

A0A2P5BCG4 Uncharacterized protein (Fragment)1.4e-1032.08Show/hide
Query:  EIDEVMVRDNTVTFAPNVINVAFKLSDIPNAEGNALLSSQDEDFLAAALASVARRGAQWD--GRGATRTLKAQLLDFEPTFWMHWTKNRIMPTTHDATLS
        E + V VR   V+++   IN  F L D P  E +  + +  +  L   L +VA  GA+W+   +GA   +++ L       W H+ K+R++PTTH  T+S
Subjt:  EIDEVMVRDNTVTFAPNVINVAFKLSDIPNAEGNALLSSQDEDFLAAALASVARRGAQWD--GRGATRTLKAQLLDFEPTFWMHWTKNRIMPTTHDATLS

Query:  IPLVVLVYCIIKGIPIDLGQILCS-LRQTAYKPKGAMFCPGLVTRLCHMAGLLLTASEE
           ++L++ ++ G  I++G+++ S +R  A +  GA+F P L+TRLC  A      +EE
Subjt:  IPLVVLVYCIIKGIPIDLGQILCS-LRQTAYKPKGAMFCPGLVTRLCHMAGLLLTASEE

A0A2P5CPE8 Uncharacterized protein8.2e-1134.39Show/hide
Query:  DEVMVRDNTVTFAPNVINVAFKLSDIPNAEGNALLSSQDEDFLAAALASVARRGAQWD--GRGATRTLKAQLLDFEPTFWMHWTKNRIMPTTHDATLSIP
        D V VR   V  +   IN  + L D P  E +  + +  E  LA  L +VA  GA+W+   +GA   L++  L+     W H+ K+R++PTTH  T+S  
Subjt:  DEVMVRDNTVTFAPNVINVAFKLSDIPNAEGNALLSSQDEDFLAAALASVARRGAQWD--GRGATRTLKAQLLDFEPTFWMHWTKNRIMPTTHDATLSIP

Query:  LVVLVYCIIKGIPIDLGQIL-CSLRQTAYKPKGAMFCPGLVTRLCHMAGLLLTASEE
         V+L+Y ++ G  I++GQI+   +   A +  GA+F P L+TR+C  A      +EE
Subjt:  LVVLVYCIIKGIPIDLGQIL-CSLRQTAYKPKGAMFCPGLVTRLCHMAGLLLTASEE

A0A2P5DXM3 Uncharacterized protein5.3e-1031.82Show/hide
Query:  EIDEVMVRDNTVTFAPNVINVAFKLSDIPNAEGNALLSSQDEDFLAAALASVARRGAQWD--GRGATRTLKAQLLDFEPTFWMHWTKNRIMPTTHDATLS
        E + + VR   V+++   IN  F L D P  E +  + +  E  L   L +VA  GA+W+   +GA   +++ L       W H+ K+R++PTTH   +S
Subjt:  EIDEVMVRDNTVTFAPNVINVAFKLSDIPNAEGNALLSSQDEDFLAAALASVARRGAQWD--GRGATRTLKAQLLDFEPTFWMHWTKNRIMPTTHDATLS

Query:  IPLVVLVYCIIKGIPIDLGQILCS-LRQTAYKPKGAMFCPGLVTRLCHMAGLLL
           ++L++ ++ G  I++G+++ S +R  A +  GA+F P L+TRLC  A  L+
Subjt:  IPLVVLVYCIIKGIPIDLGQILCS-LRQTAYKPKGAMFCPGLVTRLCHMAGLLL

A0A6A3ASF6 Uncharacterized protein1.5e-0927.23Show/hide
Query:  VMVRDNTVTFAPNVINVAFKLSDIPNAEGNALLSSQ-DEDFLAAALASVARRGAQWDGRGATR-TLKAQLLDFEPTFWMHWTKNRIMPTTHDATLSIPLV
        + VR   + F    IN  F L ++   +G+A+L  + D +     L  +     +W+GR  +R ++  + L      W H+ K+++MPT+H+  +S+  +
Subjt:  VMVRDNTVTFAPNVINVAFKLSDIPNAEGNALLSSQ-DEDFLAAALASVARRGAQWDGRGATR-TLKAQLLDFEPTFWMHWTKNRIMPTTHDATLSIPLV

Query:  VLVYCIIKGIPIDLGQILC-SLRQTAYKPKGAMFCPGLVTRLCHMAGLLLTASEEVKAIRQTFDDQWLGCITRAHNMRLQAAATPR-QDPV
        +L++ +I   PID+G+I+   +     K   A+  P L+T LCH   +   A +E+           L  ITRA    L     P+ +DPV
Subjt:  VLVYCIIKGIPIDLGQILC-SLRQTAYKPKGAMFCPGLVTRLCHMAGLLLTASEEVKAIRQTFDDQWLGCITRAHNMRLQAAATPR-QDPV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTATTCTACTCTTGGGGAGGAGATCATTTCTCATTTCCATCATTGGGAGCCAAATAAAGGAGGAAGATCGGAGATTACAAGAAGACCATCAATTACGAAGTTGATCAA
GGGAATTAGTATTTTCTTGTATTATTTTGTAATTATGGATACACTTACTCAGATTGTAACCCAAGAAGAGGAGCCCGAGGTCGCCGATAGAGAGTGGCAGACCACGCAAA
ATCCAGTAGCCTTCCCTTCCACCTCCAAAGCCGAAGCAATGGAGGTACTCGACCTTGCACCGCTTGACACCTCATCCTTCCAACTTAATCCTGTCCAACTCGCCCCCGTC
GCCAACCTCCCCCCTCACCGTAACTTCATGCCTTTCTCCTCTCCATTTCCTTCGACCCTTCTTTTGCCCCCACCAGACTCTTCAACCCTTCCATCTTCTGACCCATCGTC
TTCCACTTCCTCTGGCCCCATTGTCGTCTTCGACCCTTTACCTCCTTCCACCACTGCCAACCCTCCCACTCTTCAGCTCTCTGAGAGAGAAGAGGCTACGTGGAACTCTC
TACTGGGAGAGATGGGTGCAGAAGGCGAAGCCTTGCGCCAAAGAGAATTGGAAGCTAAAGTCGCGGCGGACGAAGCAGCAAGAAAAGTTGCCACAGAAGAAGAGCAAGCG
ACAAGAGAAAGAGAGCGCGCTGAAAAGGAAGATCGAGCGGCTGGAGAGTTGGCCGCAGCAGGATTGCGCCGCAACATCCAATCCTTCGCGCTGACAATCCGAGAGCCGGT
GCAACAGAATGCAGCAGGCCCAAGCAACAAGAGGAAGAGGGCCCCTGCCCCATCAAAAGGGAAAGAAAAAGTGGGTGAAGACAAGGGGAACTTCACCGAAGAGCGTGGGT
TTAGCTGCAAGCTGCCGCAGACCATGACAAACCAAATTTCTCGCTGCAAGTGGGAGCTGTGGCGGGAAGAGATTGATGAGGTGATGGTGCGTGACAACACTGTCACATTC
GCCCCCAACGTTATCAACGTTGCCTTCAAACTGTCTGACATCCCTAACGCAGAAGGTAACGCACTCCTATCCTCGCAGGATGAGGATTTTCTGGCCGCAGCCTTAGCTTC
GGTAGCTAGACGAGGCGCCCAATGGGACGGGCGTGGCGCTACGAGGACCCTCAAGGCTCAGCTGCTCGATTTCGAGCCCACTTTCTGGATGCATTGGACAAAGAATCGCA
TCATGCCTACAACGCATGATGCTACCCTTAGCATCCCGCTGGTGGTCCTCGTCTACTGTATCATCAAAGGGATCCCCATTGATCTGGGCCAGATATTATGCTCCCTGCGC
CAGACAGCCTACAAGCCGAAGGGCGCAATGTTCTGCCCCGGTCTCGTGACAAGACTCTGCCACATGGCCGGCCTGCTACTTACCGCATCTGAAGAAGTAAAGGCCATTCG
GCAGACATTTGATGACCAATGGCTGGGGTGCATCACTAGGGCGCACAACATGCGCCTTCAAGCAGCTGCAACCCCGCGCCAAGATCCTGTCCCCACGGCAGAAGAATTGC
CCGCTGCACCCGAAGTTCAAAAGAAAAAGCGGCGCAAGCAAACAGTTGGTCGCAATCTCCAAGTCGCAGCAAGGAATACGCGAGAAACCGCTCAGGCGCAGGAAACTCCT
GTCTGCCCCTCAACGAAGCAAGCATCCTTGCCGCCGCCATCCTCTCCTGTGCGCCAGCCCAACCCCAATGATGAGCGCGTGGAGACCATGCATCAGGTCGAAGTCCACGA
CAACACGACTTCCCTTTCAGATTTCCCGCGCCAAGACAACAATTCTCCTGCGCTGCCAAACCAGCAGCCGCAAGCTAATCCTGCCGCCGACAATGTCCGTGCCCTGCCAG
ATCCTATCCTTGACTTGGATTCAGTTCAAATTTTTGCATAA
mRNA sequenceShow/hide mRNA sequence
ATGTATTCTACTCTTGGGGAGGAGATCATTTCTCATTTCCATCATTGGGAGCCAAATAAAGGAGGAAGATCGGAGATTACAAGAAGACCATCAATTACGAAGTTGATCAA
GGGAATTAGTATTTTCTTGTATTATTTTGTAATTATGGATACACTTACTCAGATTGTAACCCAAGAAGAGGAGCCCGAGGTCGCCGATAGAGAGTGGCAGACCACGCAAA
ATCCAGTAGCCTTCCCTTCCACCTCCAAAGCCGAAGCAATGGAGGTACTCGACCTTGCACCGCTTGACACCTCATCCTTCCAACTTAATCCTGTCCAACTCGCCCCCGTC
GCCAACCTCCCCCCTCACCGTAACTTCATGCCTTTCTCCTCTCCATTTCCTTCGACCCTTCTTTTGCCCCCACCAGACTCTTCAACCCTTCCATCTTCTGACCCATCGTC
TTCCACTTCCTCTGGCCCCATTGTCGTCTTCGACCCTTTACCTCCTTCCACCACTGCCAACCCTCCCACTCTTCAGCTCTCTGAGAGAGAAGAGGCTACGTGGAACTCTC
TACTGGGAGAGATGGGTGCAGAAGGCGAAGCCTTGCGCCAAAGAGAATTGGAAGCTAAAGTCGCGGCGGACGAAGCAGCAAGAAAAGTTGCCACAGAAGAAGAGCAAGCG
ACAAGAGAAAGAGAGCGCGCTGAAAAGGAAGATCGAGCGGCTGGAGAGTTGGCCGCAGCAGGATTGCGCCGCAACATCCAATCCTTCGCGCTGACAATCCGAGAGCCGGT
GCAACAGAATGCAGCAGGCCCAAGCAACAAGAGGAAGAGGGCCCCTGCCCCATCAAAAGGGAAAGAAAAAGTGGGTGAAGACAAGGGGAACTTCACCGAAGAGCGTGGGT
TTAGCTGCAAGCTGCCGCAGACCATGACAAACCAAATTTCTCGCTGCAAGTGGGAGCTGTGGCGGGAAGAGATTGATGAGGTGATGGTGCGTGACAACACTGTCACATTC
GCCCCCAACGTTATCAACGTTGCCTTCAAACTGTCTGACATCCCTAACGCAGAAGGTAACGCACTCCTATCCTCGCAGGATGAGGATTTTCTGGCCGCAGCCTTAGCTTC
GGTAGCTAGACGAGGCGCCCAATGGGACGGGCGTGGCGCTACGAGGACCCTCAAGGCTCAGCTGCTCGATTTCGAGCCCACTTTCTGGATGCATTGGACAAAGAATCGCA
TCATGCCTACAACGCATGATGCTACCCTTAGCATCCCGCTGGTGGTCCTCGTCTACTGTATCATCAAAGGGATCCCCATTGATCTGGGCCAGATATTATGCTCCCTGCGC
CAGACAGCCTACAAGCCGAAGGGCGCAATGTTCTGCCCCGGTCTCGTGACAAGACTCTGCCACATGGCCGGCCTGCTACTTACCGCATCTGAAGAAGTAAAGGCCATTCG
GCAGACATTTGATGACCAATGGCTGGGGTGCATCACTAGGGCGCACAACATGCGCCTTCAAGCAGCTGCAACCCCGCGCCAAGATCCTGTCCCCACGGCAGAAGAATTGC
CCGCTGCACCCGAAGTTCAAAAGAAAAAGCGGCGCAAGCAAACAGTTGGTCGCAATCTCCAAGTCGCAGCAAGGAATACGCGAGAAACCGCTCAGGCGCAGGAAACTCCT
GTCTGCCCCTCAACGAAGCAAGCATCCTTGCCGCCGCCATCCTCTCCTGTGCGCCAGCCCAACCCCAATGATGAGCGCGTGGAGACCATGCATCAGGTCGAAGTCCACGA
CAACACGACTTCCCTTTCAGATTTCCCGCGCCAAGACAACAATTCTCCTGCGCTGCCAAACCAGCAGCCGCAAGCTAATCCTGCCGCCGACAATGTCCGTGCCCTGCCAG
ATCCTATCCTTGACTTGGATTCAGTTCAAATTTTTGCATAA
Protein sequenceShow/hide protein sequence
MYSTLGEEIISHFHHWEPNKGGRSEITRRPSITKLIKGISIFLYYFVIMDTLTQIVTQEEEPEVADREWQTTQNPVAFPSTSKAEAMEVLDLAPLDTSSFQLNPVQLAPV
ANLPPHRNFMPFSSPFPSTLLLPPPDSSTLPSSDPSSSTSSGPIVVFDPLPPSTTANPPTLQLSEREEATWNSLLGEMGAEGEALRQRELEAKVAADEAARKVATEEEQA
TRERERAEKEDRAAGELAAAGLRRNIQSFALTIREPVQQNAAGPSNKRKRAPAPSKGKEKVGEDKGNFTEERGFSCKLPQTMTNQISRCKWELWREEIDEVMVRDNTVTF
APNVINVAFKLSDIPNAEGNALLSSQDEDFLAAALASVARRGAQWDGRGATRTLKAQLLDFEPTFWMHWTKNRIMPTTHDATLSIPLVVLVYCIIKGIPIDLGQILCSLR
QTAYKPKGAMFCPGLVTRLCHMAGLLLTASEEVKAIRQTFDDQWLGCITRAHNMRLQAAATPRQDPVPTAEELPAAPEVQKKKRRKQTVGRNLQVAARNTRETAQAQETP
VCPSTKQASLPPPSSPVRQPNPNDERVETMHQVEVHDNTTSLSDFPRQDNNSPALPNQQPQANPAADNVRALPDPILDLDSVQIFA