; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg028422 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg028422
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionReverse transcriptase domain-containing protein
Genome locationscaffold7:15154370..15165265
RNA-Seq ExpressionSpg028422
SyntenySpg028422
Gene Ontology termsGO:0003824 - catalytic activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
BBN69274.1 TatD related DNase [Prunus dulcis]6.3e-1241.07Show/hide
Query:  KSEILGFNLDGNQMDWLKTTFGRRQGYWTTTYLGVSLGGHPKNVSFWQPKILKIQKKLHSWKYAFISKGGRHTLIQATLSKA---YPRLFHLTTRSTASV
        KS ILG N     ++ +  ++G   G W   YLG+ LGG+P+ ++FW P + K++K+L  WK A +SKGGR TLIQA LS     Y  LF +    TA V
Subjt:  KSEILGFNLDGNQMDWLKTTFGRRQGYWTTTYLGVSLGGHPKNVSFWQPKILKIQKKLHSWKYAFISKGGRHTLIQATLSKA---YPRLFHLTTRSTASV

Query:  HQVWNSSNVTWD
         Q+    N  W+
Subjt:  HQVWNSSNVTWD

KAA0044451.1 LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa]1.1e-1336Show/hide
Query:  KSEILGFNLDGNQMDWLKTTFGRRQGYWTTTYLGVSLGGHPKNVSFWQPKILKIQKKLHSWKYAFISKGGRHTLIQAT----------------------
        KS I   N+  +    +  ++G  +G+  T+YLG+ LGG P + +FW   + KIQKKL SWKY+ +SKGGR TLI +T                      
Subjt:  KSEILGFNLDGNQMDWLKTTFGRRQGYWTTTYLGVSLGGHPKNVSFWQPKILKIQKKLHSWKYAFISKGGRHTLIQAT----------------------

Query:  --------LSKAYPRLFHLTTRSTASVHQVWNSSNVTWDLGLRRNLNDLE
                LS   PRLF L+T    SV   WN S+  W L + R L D E
Subjt:  --------LSKAYPRLFHLTTRSTASVHQVWNSSNVTWDLGLRRNLNDLE

PRQ36601.1 putative RNA-directed DNA polymerase [Rosa chinensis]1.4e-1146.25Show/hide
Query:  KSEILGFNLDGNQMDWLKTTFGRRQGYWTTTYLGVSLGGHPKNVSFWQPKILKIQKKLHSWKYAFISKGGRHTLIQATLS
        K  ++G N +  +++ +    G   G W   YLG+ LGG+PK  SFW P + KI+K L  WK AF+S+GGR TLIQA LS
Subjt:  KSEILGFNLDGNQMDWLKTTFGRRQGYWTTTYLGVSLGGHPKNVSFWQPKILKIQKKLHSWKYAFISKGGRHTLIQATLS

TYK29578.1 LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa]1.1e-1336Show/hide
Query:  KSEILGFNLDGNQMDWLKTTFGRRQGYWTTTYLGVSLGGHPKNVSFWQPKILKIQKKLHSWKYAFISKGGRHTLIQAT----------------------
        KS I   N+  +    +  ++G  +G+  T+YLG+ LGG P + +FW   + KIQKKL SWKY+ +SKGGR TLI +T                      
Subjt:  KSEILGFNLDGNQMDWLKTTFGRRQGYWTTTYLGVSLGGHPKNVSFWQPKILKIQKKLHSWKYAFISKGGRHTLIQAT----------------------

Query:  --------LSKAYPRLFHLTTRSTASVHQVWNSSNVTWDLGLRRNLNDLE
                LS   PRLF L+T    SV   WN S+  W L + R L D E
Subjt:  --------LSKAYPRLFHLTTRSTASVHQVWNSSNVTWDLGLRRNLNDLE

VVA31869.1 Hypothetical predicted protein, partial [Prunus dulcis]6.3e-1241.07Show/hide
Query:  KSEILGFNLDGNQMDWLKTTFGRRQGYWTTTYLGVSLGGHPKNVSFWQPKILKIQKKLHSWKYAFISKGGRHTLIQATLSKA---YPRLFHLTTRSTASV
        KS ILG N     ++ +  ++G   G W   YLG+ LGG+P+ ++FW P + K++K+L  WK A +SKGGR TLIQA LS     Y  LF +    TA V
Subjt:  KSEILGFNLDGNQMDWLKTTFGRRQGYWTTTYLGVSLGGHPKNVSFWQPKILKIQKKLHSWKYAFISKGGRHTLIQATLSKA---YPRLFHLTTRSTASV

Query:  HQVWNSSNVTWD
         Q+    N  W+
Subjt:  HQVWNSSNVTWD

TrEMBL top hitse value%identityAlignment
A0A5A7TSA7 LINE-1 retrotransposable element ORF2 protein5.5e-1436Show/hide
Query:  KSEILGFNLDGNQMDWLKTTFGRRQGYWTTTYLGVSLGGHPKNVSFWQPKILKIQKKLHSWKYAFISKGGRHTLIQAT----------------------
        KS I   N+  +    +  ++G  +G+  T+YLG+ LGG P + +FW   + KIQKKL SWKY+ +SKGGR TLI +T                      
Subjt:  KSEILGFNLDGNQMDWLKTTFGRRQGYWTTTYLGVSLGGHPKNVSFWQPKILKIQKKLHSWKYAFISKGGRHTLIQAT----------------------

Query:  --------LSKAYPRLFHLTTRSTASVHQVWNSSNVTWDLGLRRNLNDLE
                LS   PRLF L+T    SV   WN S+  W L + R L D E
Subjt:  --------LSKAYPRLFHLTTRSTASVHQVWNSSNVTWDLGLRRNLNDLE

A0A5D3E1E3 LINE-1 retrotransposable element ORF2 protein5.5e-1436Show/hide
Query:  KSEILGFNLDGNQMDWLKTTFGRRQGYWTTTYLGVSLGGHPKNVSFWQPKILKIQKKLHSWKYAFISKGGRHTLIQAT----------------------
        KS I   N+  +    +  ++G  +G+  T+YLG+ LGG P + +FW   + KIQKKL SWKY+ +SKGGR TLI +T                      
Subjt:  KSEILGFNLDGNQMDWLKTTFGRRQGYWTTTYLGVSLGGHPKNVSFWQPKILKIQKKLHSWKYAFISKGGRHTLIQAT----------------------

Query:  --------LSKAYPRLFHLTTRSTASVHQVWNSSNVTWDLGLRRNLNDLE
                LS   PRLF L+T    SV   WN S+  W L + R L D E
Subjt:  --------LSKAYPRLFHLTTRSTASVHQVWNSSNVTWDLGLRRNLNDLE

A0A5E4FWN6 Reverse transcriptase domain-containing protein (Fragment)3.0e-1241.07Show/hide
Query:  KSEILGFNLDGNQMDWLKTTFGRRQGYWTTTYLGVSLGGHPKNVSFWQPKILKIQKKLHSWKYAFISKGGRHTLIQATLSKA---YPRLFHLTTRSTASV
        KS ILG N     ++ +  ++G   G W   YLG+ LGG+P+ ++FW P + K++K+L  WK A +SKGGR TLIQA LS     Y  LF +    TA V
Subjt:  KSEILGFNLDGNQMDWLKTTFGRRQGYWTTTYLGVSLGGHPKNVSFWQPKILKIQKKLHSWKYAFISKGGRHTLIQATLSKA---YPRLFHLTTRSTASV

Query:  HQVWNSSNVTWD
         Q+    N  W+
Subjt:  HQVWNSSNVTWD

A0A5H2XQW2 TatD related DNase3.0e-1241.07Show/hide
Query:  KSEILGFNLDGNQMDWLKTTFGRRQGYWTTTYLGVSLGGHPKNVSFWQPKILKIQKKLHSWKYAFISKGGRHTLIQATLSKA---YPRLFHLTTRSTASV
        KS ILG N     ++ +  ++G   G W   YLG+ LGG+P+ ++FW P + K++K+L  WK A +SKGGR TLIQA LS     Y  LF +    TA V
Subjt:  KSEILGFNLDGNQMDWLKTTFGRRQGYWTTTYLGVSLGGHPKNVSFWQPKILKIQKKLHSWKYAFISKGGRHTLIQATLSKA---YPRLFHLTTRSTASV

Query:  HQVWNSSNVTWD
         Q+    N  W+
Subjt:  HQVWNSSNVTWD

M5VS59 Reverse transcriptase domain-containing protein (Fragment)4.0e-1240Show/hide
Query:  KSEILGFNLDGNQMDWLKTTFGRRQGYWTTTYLGVSLGGHPKNVSFWQPKILKIQKKLHSWKYAFISKGGRHTLIQATLSKA---YPRLFHLTTRSTASV
        KS ILG N     ++ +  ++G   G W   YLG+ LGG+P+ ++FW P + K++K+L  WK A +SKGGR TLIQA LS     Y  LF +     A V
Subjt:  KSEILGFNLDGNQMDWLKTTFGRRQGYWTTTYLGVSLGGHPKNVSFWQPKILKIQKKLHSWKYAFISKGGRHTLIQATLSKA---YPRLFHLTTRSTASV

Query:  HQVWNSSNVTWDLGLRRNLN
         Q+    N  W+ GL    N
Subjt:  HQVWNSSNVTWDLGLRRNLN

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACGACCAAGAGAGTCTCGACCAACGTGGGAGGAGATTCATCTTCGGTTGGAAAAGAGGCGGAGTCAACCACCGTCCTCTCACCACGAGCAACAACCGTACGCTTGCT
GTCGATTGAACAAGATGTGAAAATCTTGAAGAATGATGTGGGTGAGATCAAGAAAACCTTGGAAATAATCTGCAAGAAGTTGGGAATTAAATCGGATCAACGATCAACAA
ACCCGATGATGCAAGAAAAGCTAGGAATGGAACAAGAATGGTCCAAGAAGCAGGAGACAACAAGACGGGACGGACTCCTCGAGAAACAAGGACCTTGGAAAGATGGGAAA
CAAAGGGGAACCAAGTTAATTCTTCAAGTGGAAGCCTTTAGAAACGCAAATGATTCTGGAAAAAATTGGCAACAAGACCGAGCAGGTGATTACAAATCCAGCAACGCAGA
CAAATTGGGGAAAAGATCAACAAAACCACCAAGGAGAATGCAACAAGACAAAATATCAGCAAGAAAACAAGGAGCCAATCATTGGGGAAAGCTTTCCTCTAAATCAATGC
TCTCAAGATCAAAAAAGGAACAGTTGGAGGATACGATGAAAGATTCAACTATTATCTCATGGAGTGCAATCAGGCAAAATTATGTCTCATCCGGTTGTAAAAGTGAGATT
TTGGGATTCAACCTTGATGGCAATCAAATGGATTGGCTGAAGACAACTTTCGGACGTAGACAGGGTTATTGGACTACAACATATCTTGGAGTTTCCTTAGGTGGTCATCC
AAAGAATGTGTCCTTTTGGCAACCAAAGATTTTAAAAATTCAGAAAAAGCTTCATAGTTGGAAGTATGCATTTATCTCGAAAGGTGGTAGACATACGCTTATTCAAGCTA
CTCTCTCAAAAGCTTATCCAAGACTATTTCACTTAACTACTAGATCTACTGCTTCGGTTCATCAAGTTTGGAATAGTTCTAATGTGACATGGGATTTGGGGCTCAGACGT
AATCTAAATGATTTGGAGTGTTCCTATGCCTTTGAATATTGGCTAACTATGAAGAATGCCTTTGATCCAACCGTCTCTCTACTTAATTGTGATATCATTGAAGAGGCTTG
CACAAATTTACTGGTCCATTCAATCAACTTAAAGCAAGATAATTTTCCAAAGGATTCATCACAAAACCTTACTGTGGAGCATTGTAATATCGGGTCCAAAGGTACACATT
TTGATAAGGTTTTATTGGCTTCTTCTAAAACAAACTCATCACATAACGACCACTCTTCTCCCTACATTGATGTTTCGGATTGTGAATCTGATGTTAGTGTAAGTAGTGTG
GAACTTGATTTTCAGCACCATAGCAACTTTTGTGAAGAAGATATAGCTGCGGATTTTGTTCTTGATGACTTAAAAGCTCTCTTTCTGACACCTATCAAATTGTGCTTAAA
GATGGAGGAAAGTCTAGACCATATCTTTATTCACTGTGATTTTGCTTGGAAGGCATGGAGTTTTATTGCCACGTTTTTGGGATTAGAGTTGGGTGCCGGCAATCTGCTAC
TAGCAACTCGACCAATGGCATGGGATGATTTCATGAATATCGAGGGTCAAGACCCACTGATCACCGAGCATATGGCAGTGGATAAGCAGGGGGCCGATAAAGATCAAGTA
AAGCCAGCGACGAAAGCCACCGATCATATGGTCAAGGAGGAACAACCCGCTGAACTACTGGCCACTACTGCTGACAATGGGGTCGTTAAAGATGGAGCGAAATCGACGAC
GGAGGCCATCAAAAATACACCAAGCAGTACTCCAGAAGTGTACAACATAGCCTTTGATATCCCAACTGATTTGTCTAATGGGTTTGGGAAATGGCTCAAGGCGACCGATA
AAGAAATTTGCCCAATGGAGTACACCATGAAGCTAAAATCCTTCATTCGAAAGTTCTTCAAACATGAATGGTTTTGGCCGATAATGGTGACTAATGATGGAGATGTTGAT
ACGCTAGCCACATGGTGGGCCAATGCCGATCAAACGTTTATTGATATCGTGCTAGGGCATCATAAGGTTTACGAAGTTTGGGTAGATGGTGTTGAATGTGACTCAATGCC
TCAGTACGTCGTTGATGTCAGGCTAGCTAAGCAACACTTCGACGAGCCTTCTCCCGACGACGCATTCACCGACGAGCTCTTCCACCGACTCCCAATTCTTCCATCGACCT
TTGCGATTTTTTGCAACAGGGGTTCGCGTCAGCTTATCCGCCACTTGTTCGCGTCCATTCGTCTATCATTGCCCATCTGA
mRNA sequenceShow/hide mRNA sequence
ATGACGACCAAGAGAGTCTCGACCAACGTGGGAGGAGATTCATCTTCGGTTGGAAAAGAGGCGGAGTCAACCACCGTCCTCTCACCACGAGCAACAACCGTACGCTTGCT
GTCGATTGAACAAGATGTGAAAATCTTGAAGAATGATGTGGGTGAGATCAAGAAAACCTTGGAAATAATCTGCAAGAAGTTGGGAATTAAATCGGATCAACGATCAACAA
ACCCGATGATGCAAGAAAAGCTAGGAATGGAACAAGAATGGTCCAAGAAGCAGGAGACAACAAGACGGGACGGACTCCTCGAGAAACAAGGACCTTGGAAAGATGGGAAA
CAAAGGGGAACCAAGTTAATTCTTCAAGTGGAAGCCTTTAGAAACGCAAATGATTCTGGAAAAAATTGGCAACAAGACCGAGCAGGTGATTACAAATCCAGCAACGCAGA
CAAATTGGGGAAAAGATCAACAAAACCACCAAGGAGAATGCAACAAGACAAAATATCAGCAAGAAAACAAGGAGCCAATCATTGGGGAAAGCTTTCCTCTAAATCAATGC
TCTCAAGATCAAAAAAGGAACAGTTGGAGGATACGATGAAAGATTCAACTATTATCTCATGGAGTGCAATCAGGCAAAATTATGTCTCATCCGGTTGTAAAAGTGAGATT
TTGGGATTCAACCTTGATGGCAATCAAATGGATTGGCTGAAGACAACTTTCGGACGTAGACAGGGTTATTGGACTACAACATATCTTGGAGTTTCCTTAGGTGGTCATCC
AAAGAATGTGTCCTTTTGGCAACCAAAGATTTTAAAAATTCAGAAAAAGCTTCATAGTTGGAAGTATGCATTTATCTCGAAAGGTGGTAGACATACGCTTATTCAAGCTA
CTCTCTCAAAAGCTTATCCAAGACTATTTCACTTAACTACTAGATCTACTGCTTCGGTTCATCAAGTTTGGAATAGTTCTAATGTGACATGGGATTTGGGGCTCAGACGT
AATCTAAATGATTTGGAGTGTTCCTATGCCTTTGAATATTGGCTAACTATGAAGAATGCCTTTGATCCAACCGTCTCTCTACTTAATTGTGATATCATTGAAGAGGCTTG
CACAAATTTACTGGTCCATTCAATCAACTTAAAGCAAGATAATTTTCCAAAGGATTCATCACAAAACCTTACTGTGGAGCATTGTAATATCGGGTCCAAAGGTACACATT
TTGATAAGGTTTTATTGGCTTCTTCTAAAACAAACTCATCACATAACGACCACTCTTCTCCCTACATTGATGTTTCGGATTGTGAATCTGATGTTAGTGTAAGTAGTGTG
GAACTTGATTTTCAGCACCATAGCAACTTTTGTGAAGAAGATATAGCTGCGGATTTTGTTCTTGATGACTTAAAAGCTCTCTTTCTGACACCTATCAAATTGTGCTTAAA
GATGGAGGAAAGTCTAGACCATATCTTTATTCACTGTGATTTTGCTTGGAAGGCATGGAGTTTTATTGCCACGTTTTTGGGATTAGAGTTGGGTGCCGGCAATCTGCTAC
TAGCAACTCGACCAATGGCATGGGATGATTTCATGAATATCGAGGGTCAAGACCCACTGATCACCGAGCATATGGCAGTGGATAAGCAGGGGGCCGATAAAGATCAAGTA
AAGCCAGCGACGAAAGCCACCGATCATATGGTCAAGGAGGAACAACCCGCTGAACTACTGGCCACTACTGCTGACAATGGGGTCGTTAAAGATGGAGCGAAATCGACGAC
GGAGGCCATCAAAAATACACCAAGCAGTACTCCAGAAGTGTACAACATAGCCTTTGATATCCCAACTGATTTGTCTAATGGGTTTGGGAAATGGCTCAAGGCGACCGATA
AAGAAATTTGCCCAATGGAGTACACCATGAAGCTAAAATCCTTCATTCGAAAGTTCTTCAAACATGAATGGTTTTGGCCGATAATGGTGACTAATGATGGAGATGTTGAT
ACGCTAGCCACATGGTGGGCCAATGCCGATCAAACGTTTATTGATATCGTGCTAGGGCATCATAAGGTTTACGAAGTTTGGGTAGATGGTGTTGAATGTGACTCAATGCC
TCAGTACGTCGTTGATGTCAGGCTAGCTAAGCAACACTTCGACGAGCCTTCTCCCGACGACGCATTCACCGACGAGCTCTTCCACCGACTCCCAATTCTTCCATCGACCT
TTGCGATTTTTTGCAACAGGGGTTCGCGTCAGCTTATCCGCCACTTGTTCGCGTCCATTCGTCTATCATTGCCCATCTGA
Protein sequenceShow/hide protein sequence
MTTKRVSTNVGGDSSSVGKEAESTTVLSPRATTVRLLSIEQDVKILKNDVGEIKKTLEIICKKLGIKSDQRSTNPMMQEKLGMEQEWSKKQETTRRDGLLEKQGPWKDGK
QRGTKLILQVEAFRNANDSGKNWQQDRAGDYKSSNADKLGKRSTKPPRRMQQDKISARKQGANHWGKLSSKSMLSRSKKEQLEDTMKDSTIISWSAIRQNYVSSGCKSEI
LGFNLDGNQMDWLKTTFGRRQGYWTTTYLGVSLGGHPKNVSFWQPKILKIQKKLHSWKYAFISKGGRHTLIQATLSKAYPRLFHLTTRSTASVHQVWNSSNVTWDLGLRR
NLNDLECSYAFEYWLTMKNAFDPTVSLLNCDIIEEACTNLLVHSINLKQDNFPKDSSQNLTVEHCNIGSKGTHFDKVLLASSKTNSSHNDHSSPYIDVSDCESDVSVSSV
ELDFQHHSNFCEEDIAADFVLDDLKALFLTPIKLCLKMEESLDHIFIHCDFAWKAWSFIATFLGLELGAGNLLLATRPMAWDDFMNIEGQDPLITEHMAVDKQGADKDQV
KPATKATDHMVKEEQPAELLATTADNGVVKDGAKSTTEAIKNTPSSTPEVYNIAFDIPTDLSNGFGKWLKATDKEICPMEYTMKLKSFIRKFFKHEWFWPIMVTNDGDVD
TLATWWANADQTFIDIVLGHHKVYEVWVDGVECDSMPQYVVDVRLAKQHFDEPSPDDAFTDELFHRLPILPSTFAIFCNRGSRQLIRHLFASIRLSLPI