; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg028424 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg028424
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
Descriptionzf-RVT domain-containing protein
Genome locationscaffold7:12371729..12380927
RNA-Seq ExpressionSpg028424
SyntenySpg028424
Gene Ontology termsGO:0005488 - binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8772590.1 hypothetical protein D1007_55406 [Hordeum vulgare]4.1e-1241.41Show/hide
Query:  AKESDATAVRGILDCYERVSGQTVNFDKSIISFSPSTDVRVKAQVGQILQWNEGLIRQHFSPQEVSLILSIPVRAGAEDKIVWHYEKSGLFSVKSGYRL
        A E +AT ++ IL  YE VSGQ +N +KS + FS +T   VKA       W++ L+   FS  E  LIL++P+R G  D I WH++  G+ SV++ Y+L
Subjt:  AKESDATAVRGILDCYERVSGQTVNFDKSIISFSPSTDVRVKAQVGQILQWNEGLIRQHFSPQEVSLILSIPVRAGAEDKIVWHYEKSGLFSVKSGYRL

PWA65252.1 hypothetical protein CTI12_AA315900 [Artemisia annua]6.1e-0835Show/hide
Query:  KSLWAKESDATAVRGILDCYERVSGQTVNFDKSIIS-----------------FSPSTDVRVKAQVGQILQWNEGLIRQHFSPQEVSLILSIPV-RAGAE
        K + AK S+   +  ++D Y + SGQ++NF KS                    FSP T V      G    W+   +     P+EVSLI  IP+ ++GA 
Subjt:  KSLWAKESDATAVRGILDCYERVSGQTVNFDKSIIS-----------------FSPSTDVRVKAQVGQILQWNEGLIRQHFSPQEVSLILSIPV-RAGAE

Query:  DKIVWHYEKSGLFSVKSGYR
        DK+VWHY+  G ++VKSGY+
Subjt:  DKIVWHYEKSGLFSVKSGYR

XP_010496008.1 PREDICTED: uncharacterized protein LOC104773141 [Camelina sativa]1.1e-0935.85Show/hide
Query:  ILDCYERVSGQTVNFDKSIISFSPSTDVRVKAQVGQIL---------------QWNEGLIRQHFSPQEVSLILSIPV-RAGAEDKIVWHYEKSGLFSVKS
        I+  Y R SGQ VN DKS I F       V++Q+  ++                W+   + + F P+++SLI S+PV +    D+++WH+ KSG +SVKS
Subjt:  ILDCYERVSGQTVNFDKSIISFSPSTDVRVKAQVGQIL---------------QWNEGLIRQHFSPQEVSLILSIPV-RAGAEDKIVWHYEKSGLFSVKS

Query:  GYRLGQ
        GYRL +
Subjt:  GYRLGQ

XP_015899247.1 uncharacterized protein LOC107432585 [Ziziphus jujuba]2.7e-1132.93Show/hide
Query:  DSHYVRIKFKQRTILNKKFFIGLLKSSSLEGSSFFKKFWGLEVLKSQK-----FWGLEVLKSLWAKESDATAVRGILDCYERVSGQTVNFDKSIISFSPS
        DS +V +  +  T ++    I  L SS L  S   K   G+ +  S       F+  + +    A + D   +  IL  YER  GQ VN  K+++SFSP+
Subjt:  DSHYVRIKFKQRTILNKKFFIGLLKSSSLEGSSFFKKFWGLEVLKSQK-----FWGLEVLKSLWAKESDATAVRGILDCYERVSGQTVNFDKSIISFSPS

Query:  TDVRVKAQVGQI--LQWNEGLIRQHFSPQEVSLILSIPV-RAGAEDKIVWHYEKSGLFSVKSGY
        T + ++ Q G      WN  L+R  F   EVS I +IP+   G  D+  W Y  +G+++VKSGY
Subjt:  TDVRVKAQVGQI--LQWNEGLIRQHFSPQEVSLILSIPV-RAGAEDKIVWHYEKSGLFSVKSGY

XP_024037590.1 uncharacterized protein LOC112097210 [Citrus clementina]8.0e-0842.47Show/hide
Query:  KSIISFSPSTDVRVKAQVGQILQWNEGLIRQHFSPQEVSLILSIPV-RAGAEDKIVWHYEKSGLFSVKSGYRL
        K I + S  TD  V   + +  QW E LI QHF P++   I+ IP+ +   ED+++WHY+K G +SVKSGY++
Subjt:  KSIISFSPSTDVRVKAQVGQILQWNEGLIRQHFSPQEVSLILSIPV-RAGAEDKIVWHYEKSGLFSVKSGYRL

TrEMBL top hitse value%identityAlignment
A0A1R3JM85 Reverse transcriptase3.3e-0731.09Show/hide
Query:  AKESDATAVRGILDCYERVSGQTVNFDKSIISFSPSTDVR----VKAQVG-------------QILQWNEGLIRQHFSPQEVSLILSIPVRAGAE---DK
        A E +  A+  +L  ++  +GQ +NF K  + FS +T +     +K ++G             + + W E ++R  F+  EV  I  IP+  G+E   D+
Subjt:  AKESDATAVRGILDCYERVSGQTVNFDKSIISFSPSTDVR----VKAQVG-------------QILQWNEGLIRQHFSPQEVSLILSIPVRAGAE---DK

Query:  IVWHYEKSGLFSVKSGYRL
        I WH+ + G +SVKSGY+L
Subjt:  IVWHYEKSGLFSVKSGYRL

A0A2K2CJK6 zf-RVT domain-containing protein1.5e-0759.18Show/hide
Query:  WNEGLIRQHFSPQEVSLILSIPVRAGAEDKIVWHYEKSGLFSVKSGYRL
        WN+ LI QHF   +V LILSIP+RA +ED I WH++  GLFSVKS Y++
Subjt:  WNEGLIRQHFSPQEVSLILSIPVRAGAEDKIVWHYEKSGLFSVKSGYRL

A0A2U1MVH6 zf-RVT domain-containing protein3.0e-0835Show/hide
Query:  KSLWAKESDATAVRGILDCYERVSGQTVNFDKSIIS-----------------FSPSTDVRVKAQVGQILQWNEGLIRQHFSPQEVSLILSIPV-RAGAE
        K + AK S+   +  ++D Y + SGQ++NF KS                    FSP T V      G    W+   +     P+EVSLI  IP+ ++GA 
Subjt:  KSLWAKESDATAVRGILDCYERVSGQTVNFDKSIIS-----------------FSPSTDVRVKAQVGQILQWNEGLIRQHFSPQEVSLILSIPV-RAGAE

Query:  DKIVWHYEKSGLFSVKSGYR
        DK+VWHY+  G ++VKSGY+
Subjt:  DKIVWHYEKSGLFSVKSGYR

A0A6P4BJG5 uncharacterized protein LOC1074325851.3e-1132.93Show/hide
Query:  DSHYVRIKFKQRTILNKKFFIGLLKSSSLEGSSFFKKFWGLEVLKSQK-----FWGLEVLKSLWAKESDATAVRGILDCYERVSGQTVNFDKSIISFSPS
        DS +V +  +  T ++    I  L SS L  S   K   G+ +  S       F+  + +    A + D   +  IL  YER  GQ VN  K+++SFSP+
Subjt:  DSHYVRIKFKQRTILNKKFFIGLLKSSSLEGSSFFKKFWGLEVLKSQK-----FWGLEVLKSLWAKESDATAVRGILDCYERVSGQTVNFDKSIISFSPS

Query:  TDVRVKAQVGQI--LQWNEGLIRQHFSPQEVSLILSIPV-RAGAEDKIVWHYEKSGLFSVKSGY
        T + ++ Q G      WN  L+R  F   EVS I +IP+   G  D+  W Y  +G+++VKSGY
Subjt:  TDVRVKAQVGQI--LQWNEGLIRQHFSPQEVSLILSIPV-RAGAEDKIVWHYEKSGLFSVKSGY

A0A803QPV3 Uncharacterized protein3.3e-0736.04Show/hide
Query:  LEVLKSLWAKESDATAVRGILDCYERVSGQTVNFDKSIISFSPSTDVRVKAQVGQILQWNEGLIRQHFSPQEVSLILSIPVR-AGAEDKIVWHYEKSGLF
        L++ K+    E    A++  LD Y R SGQ +N DKS++SFSP+T   V+  +  IL     L+++ FS  +V  IL IP+  +   D  +W+   SG +
Subjt:  LEVLKSLWAKESDATAVRGILDCYERVSGQTVNFDKSIISFSPSTDVRVKAQVGQILQWNEGLIRQHFSPQEVSLILSIPVR-AGAEDKIVWHYEKSGLF

Query:  SVKSGYRLGQS
        +V+SGY    S
Subjt:  SVKSGYRLGQS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTGTTCAAGTGCCGACAGCGAGACCCACGCTCGAAGGCCAGCCGTTGTTTCTTCTCCTTCGTTCTGGGCAAGCTCGAAATTTTCTCTCCCTCTCGTTTTCTTCATCC
ACGCGCAGTAGGTGTAGGTGGCCGTAGCAGCAACTCTCGTGAAGGCCTCTTGCAAGAGCGCGACTCTGGTGGATTTCCAGCGTGGGTCGCACGAGCCATCACGGCATCTT
GGGTTGAATTAGGTGTTCGGTGGATACCCATAGCTCGAAAGGTCTCAACTCAAGTTACCTATAGCCTAAGGAATTCGAACTCTGCTGGACGCTTTTTAGCAAAGACCCAA
ATTTCCTTTGGGAAGTTAAGGCGTTTGATCCAACGCGAACTGTTTCGTATACTTCCAAGCAAGGATCAAGTTCGTGTTGACAAAGCTAGGAGGAAATTAGTCTTGCTCCA
AGTCGTCGAGCTAGCCTTCAAGCTTGCATTGAGTTTGTTTGTTAAGGAGTGTTTAGAGCTTCCGGGACCTGAACATGAAAGAAAGGCTAGTTGGGTGAATGTTAGTGCAC
CTCGGGTACAAATGGTCGAGGGGTGGCATATCACCAGTGGTTTAAGAGGAGCATCGAGGCCTTGGGTACAAATGATCAGGGATCGGTGTGATGAGTCTAAAAAGCATCGG
TGCACCTTGGGTACAAATGGCCAAGGGGCGATGCACAGTTCGAGGCCTTGGATACAAATGGTCAAGGGTCGAACGTCGAGCTCCGTAGAGAGCATTGTGGCCCTGGGTAC
AAATGGTCGGGGGACAGTGCGACTTGAAGGATCAGTCTTGGAGAGCCATATGAGGGCTAAATATGAGCGGGCTGCTTACCAGTACCTTAGTATAGTAGTTGATAATGCGA
GACCTGATTGGCTGTTGGTGCGCGATTTGAGAATCTTTTTCTTCAATCGCCTTCATCAAGGTGTTGATGTGCTCCTGCATCTCAGCCATTCTTTCTTCCGTAGTTCTTGT
CTCAGTCATCATGACAGTCACTACGTCAGAATCAAGTTCAAACAAAGGACTATACTTAACAAGAAATTTTTCATTGGATTGTTGAAGTCTTCTAGTCTTGAAGGGTCTTC
ATTCTTCAAGAAGTTTTGGGGTCTTGAAGTCTTGAAGAGCCAGAAGTTTTGGGGTCTTGAAGTCTTGAAGAGCCTTTGGGCTAAGGAGAGTGATGCCACAGCAGTTCGGG
GCATTCTGGACTGCTATGAAAGGGTGTCGGGTCAGACAGTGAATTTCGATAAGTCTATTATCTCTTTCAGTCCGAGTACAGATGTGAGGGTTAAGGCTCAGGTAGGGCAG
ATTCTGCAGTGGAACGAAGGGCTCATCCGACAGCATTTTAGCCCTCAGGAGGTCAGTCTAATTTTGTCAATTCCTGTGCGGGCTGGGGCGGAGGATAAGATTGTTTGGCA
TTATGAGAAGTCGGGCCTGTTTTCGGTGAAAAGCGGATATCGGTTGGGGCAATCAGCTTAG
mRNA sequenceShow/hide mRNA sequence
ATGTTGTTCAAGTGCCGACAGCGAGACCCACGCTCGAAGGCCAGCCGTTGTTTCTTCTCCTTCGTTCTGGGCAAGCTCGAAATTTTCTCTCCCTCTCGTTTTCTTCATCC
ACGCGCAGTAGGTGTAGGTGGCCGTAGCAGCAACTCTCGTGAAGGCCTCTTGCAAGAGCGCGACTCTGGTGGATTTCCAGCGTGGGTCGCACGAGCCATCACGGCATCTT
GGGTTGAATTAGGTGTTCGGTGGATACCCATAGCTCGAAAGGTCTCAACTCAAGTTACCTATAGCCTAAGGAATTCGAACTCTGCTGGACGCTTTTTAGCAAAGACCCAA
ATTTCCTTTGGGAAGTTAAGGCGTTTGATCCAACGCGAACTGTTTCGTATACTTCCAAGCAAGGATCAAGTTCGTGTTGACAAAGCTAGGAGGAAATTAGTCTTGCTCCA
AGTCGTCGAGCTAGCCTTCAAGCTTGCATTGAGTTTGTTTGTTAAGGAGTGTTTAGAGCTTCCGGGACCTGAACATGAAAGAAAGGCTAGTTGGGTGAATGTTAGTGCAC
CTCGGGTACAAATGGTCGAGGGGTGGCATATCACCAGTGGTTTAAGAGGAGCATCGAGGCCTTGGGTACAAATGATCAGGGATCGGTGTGATGAGTCTAAAAAGCATCGG
TGCACCTTGGGTACAAATGGCCAAGGGGCGATGCACAGTTCGAGGCCTTGGATACAAATGGTCAAGGGTCGAACGTCGAGCTCCGTAGAGAGCATTGTGGCCCTGGGTAC
AAATGGTCGGGGGACAGTGCGACTTGAAGGATCAGTCTTGGAGAGCCATATGAGGGCTAAATATGAGCGGGCTGCTTACCAGTACCTTAGTATAGTAGTTGATAATGCGA
GACCTGATTGGCTGTTGGTGCGCGATTTGAGAATCTTTTTCTTCAATCGCCTTCATCAAGGTGTTGATGTGCTCCTGCATCTCAGCCATTCTTTCTTCCGTAGTTCTTGT
CTCAGTCATCATGACAGTCACTACGTCAGAATCAAGTTCAAACAAAGGACTATACTTAACAAGAAATTTTTCATTGGATTGTTGAAGTCTTCTAGTCTTGAAGGGTCTTC
ATTCTTCAAGAAGTTTTGGGGTCTTGAAGTCTTGAAGAGCCAGAAGTTTTGGGGTCTTGAAGTCTTGAAGAGCCTTTGGGCTAAGGAGAGTGATGCCACAGCAGTTCGGG
GCATTCTGGACTGCTATGAAAGGGTGTCGGGTCAGACAGTGAATTTCGATAAGTCTATTATCTCTTTCAGTCCGAGTACAGATGTGAGGGTTAAGGCTCAGGTAGGGCAG
ATTCTGCAGTGGAACGAAGGGCTCATCCGACAGCATTTTAGCCCTCAGGAGGTCAGTCTAATTTTGTCAATTCCTGTGCGGGCTGGGGCGGAGGATAAGATTGTTTGGCA
TTATGAGAAGTCGGGCCTGTTTTCGGTGAAAAGCGGATATCGGTTGGGGCAATCAGCTTAG
Protein sequenceShow/hide protein sequence
MLFKCRQRDPRSKASRCFFSFVLGKLEIFSPSRFLHPRAVGVGGRSSNSREGLLQERDSGGFPAWVARAITASWVELGVRWIPIARKVSTQVTYSLRNSNSAGRFLAKTQ
ISFGKLRRLIQRELFRILPSKDQVRVDKARRKLVLLQVVELAFKLALSLFVKECLELPGPEHERKASWVNVSAPRVQMVEGWHITSGLRGASRPWVQMIRDRCDESKKHR
CTLGTNGQGAMHSSRPWIQMVKGRTSSSVESIVALGTNGRGTVRLEGSVLESHMRAKYERAAYQYLSIVVDNARPDWLLVRDLRIFFFNRLHQGVDVLLHLSHSFFRSSC
LSHHDSHYVRIKFKQRTILNKKFFIGLLKSSSLEGSSFFKKFWGLEVLKSQKFWGLEVLKSLWAKESDATAVRGILDCYERVSGQTVNFDKSIISFSPSTDVRVKAQVGQ
ILQWNEGLIRQHFSPQEVSLILSIPVRAGAEDKIVWHYEKSGLFSVKSGYRLGQSA