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Spg028435 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg028435
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionReverse transcriptase domain-containing protein
Genome locationscaffold7:12937398..12939643
RNA-Seq ExpressionSpg028435
SyntenySpg028435
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAB2623078.1 ribonuclease H protein [Pyrus ussuriensis x Pyrus communis]7.0e-1050Show/hide
Query:  LKKLMRDFLWKSVEEGGASHFINQKVVSRLIDLGGLGLGNLILHSKTLLAKSLWCFLLEPNALWNRVIST
        L+KLM+ FLW+ VEEG  +H +  ++V +  + GGLG+GNL   ++ LLAK LW F  EPN+LW++VI T
Subjt:  LKKLMRDFLWKSVEEGGASHFINQKVVSRLIDLGGLGLGNLILHSKTLLAKSLWCFLLEPNALWNRVIST

RVW35353.1 Transposon TX1 uncharacterized 149 kDa protein [Vitis vinifera]1.6e-0936Show/hide
Query:  PTLERYGLLMGRWSTALERSGGRGADWNQPSEASPCTAAETSAFRGGAIVRDQALKKLMRDFLWKSVEEGGASHFINQKVVSRLIDLGGLGLGNLILHSK
        P +ER    +  W  A    GGR           PC     S F+  A V  + ++KL RDFLW  + EG   H +   VV +L ++GGLG GN+ L + 
Subjt:  PTLERYGLLMGRWSTALERSGGRGADWNQPSEASPCTAAETSAFRGGAIVRDQALKKLMRDFLWKSVEEGGASHFINQKVVSRLIDLGGLGLGNLILHSK

Query:  TLLAKSLWCFLLEPNALWNRVISTV
         LL K LW +  E +ALW++VI ++
Subjt:  TLLAKSLWCFLLEPNALWNRVISTV

XP_022151711.1 uncharacterized protein LOC111019624 [Momordica charantia]1.4e-1354.29Show/hide
Query:  QALKKLMRDFLWKSVEEGGASHFINQKVVSRLIDLGGLGLGNLILHSKTLLAKSLWCFLLEPNALWNRVI
        + L+K+MRDFLW+ VEEGG +H +N K VS+ ++ GGLG+GNL L ++  LAK LW F  EP+ALW ++I
Subjt:  QALKKLMRDFLWKSVEEGGASHFINQKVVSRLIDLGGLGLGNLILHSKTLLAKSLWCFLLEPNALWNRVI

XP_028093546.1 uncharacterized protein LOC114293627 [Camellia sinensis]2.0e-0947.14Show/hide
Query:  QALKKLMRDFLWKSVEEGGASHFINQKVVSRLIDLGGLGLGNLILHSKTLLAKSLWCFLLEPNALWNRVI
        ++L+KLMRDFLW+  +EG   H +N ++VS L + GGL +GN++  +  LL K LW FLLE +++W+ VI
Subjt:  QALKKLMRDFLWKSVEEGGASHFINQKVVSRLIDLGGLGLGNLILHSKTLLAKSLWCFLLEPNALWNRVI

XP_030497604.1 uncharacterized protein LOC115713262 [Cannabis sativa]2.4e-1052.86Show/hide
Query:  QALKKLMRDFLWKSVEEGGASHFINQKVVSRLIDLGGLGLGNLILHSKTLLAKSLWCFLLEPNALWNRVI
        +AL+KLMRDFLW+  E  G  H +    V R  + GGLG+GNL L +K LL K LW F LEPN+LW++V+
Subjt:  QALKKLMRDFLWKSVEEGGASHFINQKVVSRLIDLGGLGLGNLILHSKTLLAKSLWCFLLEPNALWNRVI

TrEMBL top hitse value%identityAlignment
A0A438DIR5 Transposon TX1 uncharacterized 149 kDa protein7.5e-1036Show/hide
Query:  PTLERYGLLMGRWSTALERSGGRGADWNQPSEASPCTAAETSAFRGGAIVRDQALKKLMRDFLWKSVEEGGASHFINQKVVSRLIDLGGLGLGNLILHSK
        P +ER    +  W  A    GGR           PC     S F+  A V  + ++KL RDFLW  + EG   H +   VV +L ++GGLG GN+ L + 
Subjt:  PTLERYGLLMGRWSTALERSGGRGADWNQPSEASPCTAAETSAFRGGAIVRDQALKKLMRDFLWKSVEEGGASHFINQKVVSRLIDLGGLGLGNLILHSK

Query:  TLLAKSLWCFLLEPNALWNRVISTV
         LL K LW +  E +ALW++VI ++
Subjt:  TLLAKSLWCFLLEPNALWNRVISTV

A0A438JCR4 Putative ribonuclease H protein1.7e-0934.07Show/hide
Query:  RDQGSMGCLCPTLERYGLLMGRWSTALERSGGRGADWNQPSEASPCTAAETSAFRGGAIVRDQALKKLMRDFLWKSVEEGGASHFINQKVVSRLIDLGGL
        R+  ++G   P +ER    +  W  A    GGR       S  S   +   S F+    +  + ++K+ RDFLW  VEEG   H I  +VVSR  ++GGL
Subjt:  RDQGSMGCLCPTLERYGLLMGRWSTALERSGGRGADWNQPSEASPCTAAETSAFRGGAIVRDQALKKLMRDFLWKSVEEGGASHFINQKVVSRLIDLGGL

Query:  GLGNLILHSKTLLAKSLWCFLLEPNALWNRVISTV
        G G   + +  LL K LW F  E + LW++VI+++
Subjt:  GLGNLILHSKTLLAKSLWCFLLEPNALWNRVISTV

A0A5N5H648 Ribonuclease H protein3.4e-1050Show/hide
Query:  LKKLMRDFLWKSVEEGGASHFINQKVVSRLIDLGGLGLGNLILHSKTLLAKSLWCFLLEPNALWNRVIST
        L+KLM+ FLW+ VEEG  +H +  ++V +  + GGLG+GNL   ++ LLAK LW F  EPN+LW++VI T
Subjt:  LKKLMRDFLWKSVEEGGASHFINQKVVSRLIDLGGLGLGNLILHSKTLLAKSLWCFLLEPNALWNRVIST

A0A6J1DFI2 uncharacterized protein LOC1110196246.6e-1454.29Show/hide
Query:  QALKKLMRDFLWKSVEEGGASHFINQKVVSRLIDLGGLGLGNLILHSKTLLAKSLWCFLLEPNALWNRVI
        + L+K+MRDFLW+ VEEGG +H +N K VS+ ++ GGLG+GNL L ++  LAK LW F  EP+ALW ++I
Subjt:  QALKKLMRDFLWKSVEEGGASHFINQKVVSRLIDLGGLGLGNLILHSKTLLAKSLWCFLLEPNALWNRVI

A0A803P465 Uncharacterized protein1.7e-0936.89Show/hide
Query:  PTLERYGLLMGRWSTALERSGGRGADWNQPSEASPCTAAETSAFRGGAIVRDQALKKLMRDFLWKSVEEGGASHFINQKVVSRLIDLGGLGLGNLILHSK
        P +++    +  W  A    GGR         + P      S F+    V  +AL+K+MRDFLW+  E  G  H +    V R    GGLG+G L L +K
Subjt:  PTLERYGLLMGRWSTALERSGGRGADWNQPSEASPCTAAETSAFRGGAIVRDQALKKLMRDFLWKSVEEGGASHFINQKVVSRLIDLGGLGLGNLILHSK

Query:  TLLAKSLWCFLLEPNALWNRVI
        +LL K LW F LE N+LW+RV+
Subjt:  TLLAKSLWCFLLEPNALWNRVI

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCAAAAGGGTTCTGTTAGGGACCAAGGTAGTATGGGATGCCTTTGTCCCACATTGGAAAGATATGGGCTTCTAATGGGCCGGTGGTCGACGGCTTTGGAGAGGAGTGG
CGGCAGAGGGGCTGACTGGAACCAGCCGAGTGAAGCGTCGCCGTGCACAGCCGCCGAGACGTCGGCTTTCCGGGGAGGGGCAATTGTTAGGGACCAAGCATTGAAGAAGC
TTATGAGAGATTTCTTATGGAAAAGTGTCGAGGAGGGTGGGGCCTCCCACTTTATCAATCAAAAGGTAGTTTCTAGGCTGATTGACCTTGGGGGTTTAGGTTTGGGAAAT
CTAATACTTCACAGCAAGACCTTGTTGGCCAAGTCTTTGTGGTGCTTCCTATTGGAGCCCAATGCCTTATGGAACAGGGTTATAAGTACAGTTTGTGAATCTCTATTTGA
GATGGTTCGAGCTCTTACTTTTGGGAGGACGGTTGGTTGGACAATACTCCTTTGTTCCTTTGGTCATACCATCACTCTTCCTTCAAAGGCGTTGCTTTACAATGGAGGAG
GTGCTTTCCACCCTCAATTTCATTACAGGGAGGTATTCCTTGGCATTATAGATGTTTTGCCACCTTATAAGGGTTTTAGCTCGAAAGAAATCAGAGAATTTTCAATGATG
TTGAGAGGTCTTGGAAAGAGGCTTGGTCCTTCTGCATTGGAGCCAACTAAATGA
mRNA sequenceShow/hide mRNA sequence
ATGCAAAAGGGTTCTGTTAGGGACCAAGGTAGTATGGGATGCCTTTGTCCCACATTGGAAAGATATGGGCTTCTAATGGGCCGGTGGTCGACGGCTTTGGAGAGGAGTGG
CGGCAGAGGGGCTGACTGGAACCAGCCGAGTGAAGCGTCGCCGTGCACAGCCGCCGAGACGTCGGCTTTCCGGGGAGGGGCAATTGTTAGGGACCAAGCATTGAAGAAGC
TTATGAGAGATTTCTTATGGAAAAGTGTCGAGGAGGGTGGGGCCTCCCACTTTATCAATCAAAAGGTAGTTTCTAGGCTGATTGACCTTGGGGGTTTAGGTTTGGGAAAT
CTAATACTTCACAGCAAGACCTTGTTGGCCAAGTCTTTGTGGTGCTTCCTATTGGAGCCCAATGCCTTATGGAACAGGGTTATAAGTACAGTTTGTGAATCTCTATTTGA
GATGGTTCGAGCTCTTACTTTTGGGAGGACGGTTGGTTGGACAATACTCCTTTGTTCCTTTGGTCATACCATCACTCTTCCTTCAAAGGCGTTGCTTTACAATGGAGGAG
GTGCTTTCCACCCTCAATTTCATTACAGGGAGGTATTCCTTGGCATTATAGATGTTTTGCCACCTTATAAGGGTTTTAGCTCGAAAGAAATCAGAGAATTTTCAATGATG
TTGAGAGGTCTTGGAAAGAGGCTTGGTCCTTCTGCATTGGAGCCAACTAAATGA
Protein sequenceShow/hide protein sequence
MQKGSVRDQGSMGCLCPTLERYGLLMGRWSTALERSGGRGADWNQPSEASPCTAAETSAFRGGAIVRDQALKKLMRDFLWKSVEEGGASHFINQKVVSRLIDLGGLGLGN
LILHSKTLLAKSLWCFLLEPNALWNRVISTVCESLFEMVRALTFGRTVGWTILLCSFGHTITLPSKALLYNGGGAFHPQFHYREVFLGIIDVLPPYKGFSSKEIREFSMM
LRGLGKRLGPSALEPTK