CuGenDBv2

Gene ID	Spg028444
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	Chlorophyll a-b binding protein, chloroplastic
Genome location	scaffold7:18083029..18083550
RNA-Seq Expression	Spg028444
Synteny	Spg028444
Gene Ontology terms	GO:0009416 - response to light stimulus (biological process) GO:0009768 - photosynthesis, light harvesting in photosystem I (biological process) GO:0018298 - protein-chromophore linkage (biological process) GO:0009522 - photosystem I (cellular component) GO:0009523 - photosystem II (cellular component) GO:0009535 - chloroplast thylakoid membrane (cellular component) GO:0016168 - chlorophyll binding (molecular function) GO:0046872 - metal ion binding (molecular function)
InterPro domains	IPR001344 - Chlorophyll A-B binding protein, plant and chromista IPR022796 - Chlorophyll A-B binding protein IPR023329 - Chlorophyll a/b binding domain superfamily

Homology

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GenBank top hits

e value

%identity

Alignment

KAG6570576.1 hypothetical protein SDJN03_29491, partial [Cucurbita argyrosperma subsp. sororia]

4.1e-76

88.75

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Query:  MAASSMALPSPSLAGQAVKLSPAASDLLGDGRVTMRKTVGKPKLVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGNYGWDTVGLSADPKTFAKNRELE
        MAASSMAL SPSLAGQAVKLSP+ASD+LG+ RVTMRKT G+PK VSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPG+YGWDT GLSADP+TFAKNRELE
Subjt:  MAASSMALPSPSLAGQAVKLSPAASDLLGDGRVTMRKTVGKPKLVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGNYGWDTVGLSADPKTFAKNRELE

Query:  VIHSRWAMLGALGCVFLELLSRNDVKFGEAVWFKVGSQIFSEGGLDYLGNPSLVHAPDLV
        VIHSRWAMLGALGCVF ELLSRN VKFGEAVWFK GSQIFSEGGLDYLGNPSLVHA  ++
Subjt:  VIHSRWAMLGALGCVFLELLSRNDVKFGEAVWFKVGSQIFSEGGLDYLGNPSLVHAPDLV

XP_004145734.1 chlorophyll a-b binding protein of LHCII type 1-like [Cucumis sativus]

4.8e-77

89.38

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Query:  MAASSMALPSPSLAGQAVKLSPAASDLLGDGRVTMRKTVGKPKLVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGNYGWDTVGLSADPKTFAKNRELE
        MAASSMAL SPS AGQAVKLSP ASDLLG+GR+TMRKT GKPK VSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPG+YGWDT GLSADP+TFAKNRELE
Subjt:  MAASSMALPSPSLAGQAVKLSPAASDLLGDGRVTMRKTVGKPKLVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGNYGWDTVGLSADPKTFAKNRELE

Query:  VIHSRWAMLGALGCVFLELLSRNDVKFGEAVWFKVGSQIFSEGGLDYLGNPSLVHAPDLV
        VIHSRWAMLGALGCVF ELLSRN VKFGEAVWFK GSQIFSEGGLDYLGNPSLVHA  ++
Subjt:  VIHSRWAMLGALGCVFLELLSRNDVKFGEAVWFKVGSQIFSEGGLDYLGNPSLVHAPDLV

XP_008456347.1 PREDICTED: chlorophyll a-b binding protein of LHCII type 1 [Cucumis melo]

1.7e-77

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Query:  MAASSMALPSPSLAGQAVKLSPAASDLLGDGRVTMRKTVGKPKLVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGNYGWDTVGLSADPKTFAKNRELE
        MAASSMAL SPSLAGQAVKLSP ASDLLG+GR+TMRKT GKPK VSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPG+YGWDT GLSADP+TFAKNRELE
Subjt:  MAASSMALPSPSLAGQAVKLSPAASDLLGDGRVTMRKTVGKPKLVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGNYGWDTVGLSADPKTFAKNRELE

Query:  VIHSRWAMLGALGCVFLELLSRNDVKFGEAVWFKVGSQIFSEGGLDYLGNPSLVHAPDLV
        VIHSRWAMLGALGCVF ELLSRN VKFGEAVWFK GSQIFSEGGLDYLGNPSLVHA  ++
Subjt:  VIHSRWAMLGALGCVFLELLSRNDVKFGEAVWFKVGSQIFSEGGLDYLGNPSLVHAPDLV

XP_022944462.1 chlorophyll a-b binding protein of LHCII type 1-like [Cucurbita moschata]

4.1e-76

88.75

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Query:  MAASSMALPSPSLAGQAVKLSPAASDLLGDGRVTMRKTVGKPKLVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGNYGWDTVGLSADPKTFAKNRELE
        MAASSMAL SPSLAGQAVKLSP+ASD+LG+ RVTMRKT G+PK VSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPG+YGWDT GLSADP+TFAKNRELE
Subjt:  MAASSMALPSPSLAGQAVKLSPAASDLLGDGRVTMRKTVGKPKLVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGNYGWDTVGLSADPKTFAKNRELE

Query:  VIHSRWAMLGALGCVFLELLSRNDVKFGEAVWFKVGSQIFSEGGLDYLGNPSLVHAPDLV
        VIHSRWAMLGALGCVF ELLSRN VKFGEAVWFK GSQIFSEGGLDYLGNPSLVHA  ++
Subjt:  VIHSRWAMLGALGCVFLELLSRNDVKFGEAVWFKVGSQIFSEGGLDYLGNPSLVHAPDLV

XP_038901990.1 chlorophyll a-b binding protein of LHCII type 1 [Benincasa hispida]

7.4e-78

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Query:  MAASSMALPSPSLAGQAVKLSPAASDLLGDGRVTMRKTVGKPKLVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGNYGWDTVGLSADPKTFAKNRELE
        MAASSMAL SPSLAGQAVKLSP ASDLLGDGR+TMRKT GKPK +SSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPG+YGWDT GLSADP+TFAKNRELE
Subjt:  MAASSMALPSPSLAGQAVKLSPAASDLLGDGRVTMRKTVGKPKLVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGNYGWDTVGLSADPKTFAKNRELE

Query:  VIHSRWAMLGALGCVFLELLSRNDVKFGEAVWFKVGSQIFSEGGLDYLGNPSLVHAPDLV
        VIHSRWAMLGALGCVF ELLSRN VKFGEAVWFK GSQIFSEGGLDYLGNPSLVHA  ++
Subjt:  VIHSRWAMLGALGCVFLELLSRNDVKFGEAVWFKVGSQIFSEGGLDYLGNPSLVHAPDLV

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KGD7 Chlorophyll a-b binding protein, chloroplastic

2.3e-77

89.38

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Query:  MAASSMALPSPSLAGQAVKLSPAASDLLGDGRVTMRKTVGKPKLVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGNYGWDTVGLSADPKTFAKNRELE
        MAASSMAL SPS AGQAVKLSP ASDLLG+GR+TMRKT GKPK VSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPG+YGWDT GLSADP+TFAKNRELE
Subjt:  MAASSMALPSPSLAGQAVKLSPAASDLLGDGRVTMRKTVGKPKLVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGNYGWDTVGLSADPKTFAKNRELE

Query:  VIHSRWAMLGALGCVFLELLSRNDVKFGEAVWFKVGSQIFSEGGLDYLGNPSLVHAPDLV
        VIHSRWAMLGALGCVF ELLSRN VKFGEAVWFK GSQIFSEGGLDYLGNPSLVHA  ++
Subjt:  VIHSRWAMLGALGCVFLELLSRNDVKFGEAVWFKVGSQIFSEGGLDYLGNPSLVHAPDLV

A0A1S3C301 Chlorophyll a-b binding protein, chloroplastic

8.0e-78

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Query:  MAASSMALPSPSLAGQAVKLSPAASDLLGDGRVTMRKTVGKPKLVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGNYGWDTVGLSADPKTFAKNRELE
        MAASSMAL SPSLAGQAVKLSP ASDLLG+GR+TMRKT GKPK VSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPG+YGWDT GLSADP+TFAKNRELE
Subjt:  MAASSMALPSPSLAGQAVKLSPAASDLLGDGRVTMRKTVGKPKLVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGNYGWDTVGLSADPKTFAKNRELE

Query:  VIHSRWAMLGALGCVFLELLSRNDVKFGEAVWFKVGSQIFSEGGLDYLGNPSLVHAPDLV
        VIHSRWAMLGALGCVF ELLSRN VKFGEAVWFK GSQIFSEGGLDYLGNPSLVHA  ++
Subjt:  VIHSRWAMLGALGCVFLELLSRNDVKFGEAVWFKVGSQIFSEGGLDYLGNPSLVHAPDLV

A0A5D3DVR3 Chlorophyll a-b binding protein, chloroplastic

8.0e-78

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Query:  MAASSMALPSPSLAGQAVKLSPAASDLLGDGRVTMRKTVGKPKLVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGNYGWDTVGLSADPKTFAKNRELE
        MAASSMAL SPSLAGQAVKLSP ASDLLG+GR+TMRKT GKPK VSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPG+YGWDT GLSADP+TFAKNRELE
Subjt:  MAASSMALPSPSLAGQAVKLSPAASDLLGDGRVTMRKTVGKPKLVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGNYGWDTVGLSADPKTFAKNRELE

Query:  VIHSRWAMLGALGCVFLELLSRNDVKFGEAVWFKVGSQIFSEGGLDYLGNPSLVHAPDLV
        VIHSRWAMLGALGCVF ELLSRN VKFGEAVWFK GSQIFSEGGLDYLGNPSLVHA  ++
Subjt:  VIHSRWAMLGALGCVFLELLSRNDVKFGEAVWFKVGSQIFSEGGLDYLGNPSLVHAPDLV

A0A6J1FVQ6 Chlorophyll a-b binding protein, chloroplastic

2.0e-76

88.75

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Query:  MAASSMALPSPSLAGQAVKLSPAASDLLGDGRVTMRKTVGKPKLVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGNYGWDTVGLSADPKTFAKNRELE
        MAASSMAL SPSLAGQAVKLSP+ASD+LG+ RVTMRKT G+PK VSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPG+YGWDT GLSADP+TFAKNRELE
Subjt:  MAASSMALPSPSLAGQAVKLSPAASDLLGDGRVTMRKTVGKPKLVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGNYGWDTVGLSADPKTFAKNRELE

Query:  VIHSRWAMLGALGCVFLELLSRNDVKFGEAVWFKVGSQIFSEGGLDYLGNPSLVHAPDLV
        VIHSRWAMLGALGCVF ELLSRN VKFGEAVWFK GSQIFSEGGLDYLGNPSLVHA  ++
Subjt:  VIHSRWAMLGALGCVFLELLSRNDVKFGEAVWFKVGSQIFSEGGLDYLGNPSLVHAPDLV

A0A6J1J6F4 Chlorophyll a-b binding protein, chloroplastic

7.5e-76

88.12

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Query:  MAASSMALPSPSLAGQAVKLSPAASDLLGDGRVTMRKTVGKPKLVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGNYGWDTVGLSADPKTFAKNRELE
        MAASSMAL SPSLAGQAVKLSP+AS++LG+ RVTMRKT G+PK VSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPG+YGWDT GLSADP+TFAKNRELE
Subjt:  MAASSMALPSPSLAGQAVKLSPAASDLLGDGRVTMRKTVGKPKLVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGNYGWDTVGLSADPKTFAKNRELE

Query:  VIHSRWAMLGALGCVFLELLSRNDVKFGEAVWFKVGSQIFSEGGLDYLGNPSLVHAPDLV
        VIHSRWAMLGALGCVF ELLSRN VKFGEAVWFK GSQIFSEGGLDYLGNPSLVHA  ++
Subjt:  VIHSRWAMLGALGCVFLELLSRNDVKFGEAVWFKVGSQIFSEGGLDYLGNPSLVHAPDLV

SwissProt top hits

e value

%identity

Alignment

P04778 Chlorophyll a-b binding protein 1, chloroplastic

9.8e-73

83.12

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Query:  MAASSMALPSPSLAGQAVKLSPAASDLLGDGRVTMRKTVGKPKLVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGNYGWDTVGLSADPKTFAKNRELE
        MAAS+MAL SP+ AG+AVKLSPAAS++LG GRVTMRKTV KPK   SGSPWYG DRVKYLGPFSGE PSYLTGEFPG+YGWDT GLSADP+TFA+NRELE
Subjt:  MAASSMALPSPSLAGQAVKLSPAASDLLGDGRVTMRKTVGKPKLVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGNYGWDTVGLSADPKTFAKNRELE

Query:  VIHSRWAMLGALGCVFLELLSRNDVKFGEAVWFKVGSQIFSEGGLDYLGNPSLVHAPDLV
        VIHSRWAMLGALGCVF ELL+RN VKFGEAVWFK GSQIFS+GGLDYLGNPSLVHA  ++
Subjt:  VIHSRWAMLGALGCVFLELLSRNDVKFGEAVWFKVGSQIFSEGGLDYLGNPSLVHAPDLV

P12333 Chlorophyll a-b binding protein, chloroplastic

4.7e-75

82.5

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Query:  MAASSMALPSPSLAGQAVKLSPAASDLLGDGRVTMRKTVGKPKLVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGNYGWDTVGLSADPKTFAKNRELE
        MA+S+MAL SPSLAG+AVKL P AS+++G+GR+TMRKT GKPK V S SPWYGPDRVKYLGPFSGE PSYLTGEFPG+YGWDT GLSADP+TFAKNRELE
Subjt:  MAASSMALPSPSLAGQAVKLSPAASDLLGDGRVTMRKTVGKPKLVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGNYGWDTVGLSADPKTFAKNRELE

Query:  VIHSRWAMLGALGCVFLELLSRNDVKFGEAVWFKVGSQIFSEGGLDYLGNPSLVHAPDLV
        VIH RWAMLGALGCVF ELL+RN VKFGEAVWFK GSQIFSEGGLDYLGNPSLVHA  ++
Subjt:  VIHSRWAMLGALGCVFLELLSRNDVKFGEAVWFKVGSQIFSEGGLDYLGNPSLVHAPDLV

P27491 Chlorophyll a-b binding protein 7, chloroplastic

2.8e-72

81.25

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Query:  MAASSMALPSPSLAGQAVKLSPAASDLLGDGRVTMRKTVGKPKLVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGNYGWDTVGLSADPKTFAKNRELE
        M AS+MAL SPS AG AVKLSP++S++ G+G+  MRKTV K K VSSGSPWYGPDRVKYLGPFSGE PSYLTGEFPG+YGWDT GLSADP+TFAKNRELE
Subjt:  MAASSMALPSPSLAGQAVKLSPAASDLLGDGRVTMRKTVGKPKLVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGNYGWDTVGLSADPKTFAKNRELE

Query:  VIHSRWAMLGALGCVFLELLSRNDVKFGEAVWFKVGSQIFSEGGLDYLGNPSLVHAPDLV
        VIH RWAMLGALGCVF ELL+RN VKFGEAVWFK GSQIFSEGGLDYLGNPSLVHA  ++
Subjt:  VIHSRWAMLGALGCVFLELLSRNDVKFGEAVWFKVGSQIFSEGGLDYLGNPSLVHAPDLV

P27495 Chlorophyll a-b binding protein 40, chloroplastic

5.2e-74

82.5

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Query:  MAASSMALPSPSLAGQAVKLSPAASDLLGDGRVTMRKTVGKPKLVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGNYGWDTVGLSADPKTFAKNRELE
        MAAS+MAL SPS AG+AVKLSP++S++ G+G+VTMRKT  K K VSSGSPWYGPDRVKYLGPFSGE PSYLTGEFPG+YGWDT GLSADP+TFAKNRELE
Subjt:  MAASSMALPSPSLAGQAVKLSPAASDLLGDGRVTMRKTVGKPKLVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGNYGWDTVGLSADPKTFAKNRELE

Query:  VIHSRWAMLGALGCVFLELLSRNDVKFGEAVWFKVGSQIFSEGGLDYLGNPSLVHAPDLV
        VIH RWAMLGALGCVF ELL+RN VKFGEAVWFK GSQIFSEGGLDYLGNPSLVHA  ++
Subjt:  VIHSRWAMLGALGCVFLELLSRNDVKFGEAVWFKVGSQIFSEGGLDYLGNPSLVHAPDLV

P27496 Chlorophyll a-b binding protein 50, chloroplastic

2.2e-72

81.25

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Query:  MAASSMALPSPSLAGQAVKLSPAASDLLGDGRVTMRKTVGKPKLVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGNYGWDTVGLSADPKTFAKNRELE
        MAA++MAL S S AG+AVKLSP++S++ G+G+VTMRKTV K K +SSGSPWYGPDRVKYLGPFSGE PSYLTGEFPG+YGWDT GLSADP+TFAKNRELE
Subjt:  MAASSMALPSPSLAGQAVKLSPAASDLLGDGRVTMRKTVGKPKLVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGNYGWDTVGLSADPKTFAKNRELE

Query:  VIHSRWAMLGALGCVFLELLSRNDVKFGEAVWFKVGSQIFSEGGLDYLGNPSLVHAPDLV
        VIH RWAMLGALGCVF ELL+RN VKFGEAVWFK GSQIFSEGGLDYLGNPSLVHA  ++
Subjt:  VIHSRWAMLGALGCVFLELLSRNDVKFGEAVWFKVGSQIFSEGGLDYLGNPSLVHAPDLV

Arabidopsis top hits

e value

%identity

Alignment

AT1G29910.1 chlorophyll A/B binding protein 3

2.6e-73

82.5

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Query:  MAASSMALPSPSLAGQAVKLSPAASDLLGDGRVTMRKTVGKPKLVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGNYGWDTVGLSADPKTFAKNRELE
        MAAS+MAL SP+ AG+AV LSPAAS++LG GRVTMRKTV KPK   SGSPWYG DRVKYLGPFSGE PSYLTGEFPG+YGWDT GLSADP+TFA+NRELE
Subjt:  MAASSMALPSPSLAGQAVKLSPAASDLLGDGRVTMRKTVGKPKLVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGNYGWDTVGLSADPKTFAKNRELE

Query:  VIHSRWAMLGALGCVFLELLSRNDVKFGEAVWFKVGSQIFSEGGLDYLGNPSLVHAPDLV
        VIHSRWAMLGALGCVF ELL+RN VKFGEAVWFK GSQIFS+GGLDYLGNPSLVHA  ++
Subjt:  VIHSRWAMLGALGCVFLELLSRNDVKFGEAVWFKVGSQIFSEGGLDYLGNPSLVHAPDLV

AT1G29920.1 chlorophyll A/B-binding protein 2

2.6e-73

82.5

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Query:  MAASSMALPSPSLAGQAVKLSPAASDLLGDGRVTMRKTVGKPKLVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGNYGWDTVGLSADPKTFAKNRELE
        MAAS+MAL SP+ AG+AV LSPAAS++LG GRVTMRKTV KPK   SGSPWYG DRVKYLGPFSGE PSYLTGEFPG+YGWDT GLSADP+TFA+NRELE
Subjt:  MAASSMALPSPSLAGQAVKLSPAASDLLGDGRVTMRKTVGKPKLVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGNYGWDTVGLSADPKTFAKNRELE

Query:  VIHSRWAMLGALGCVFLELLSRNDVKFGEAVWFKVGSQIFSEGGLDYLGNPSLVHAPDLV
        VIHSRWAMLGALGCVF ELL+RN VKFGEAVWFK GSQIFS+GGLDYLGNPSLVHA  ++
Subjt:  VIHSRWAMLGALGCVFLELLSRNDVKFGEAVWFKVGSQIFSEGGLDYLGNPSLVHAPDLV

AT1G29930.1 chlorophyll A/B binding protein 1

7.0e-74

83.12

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Query:  MAASSMALPSPSLAGQAVKLSPAASDLLGDGRVTMRKTVGKPKLVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGNYGWDTVGLSADPKTFAKNRELE
        MAAS+MAL SP+ AG+AVKLSPAAS++LG GRVTMRKTV KPK   SGSPWYG DRVKYLGPFSGE PSYLTGEFPG+YGWDT GLSADP+TFA+NRELE
Subjt:  MAASSMALPSPSLAGQAVKLSPAASDLLGDGRVTMRKTVGKPKLVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGNYGWDTVGLSADPKTFAKNRELE

Query:  VIHSRWAMLGALGCVFLELLSRNDVKFGEAVWFKVGSQIFSEGGLDYLGNPSLVHAPDLV
        VIHSRWAMLGALGCVF ELL+RN VKFGEAVWFK GSQIFS+GGLDYLGNPSLVHA  ++
Subjt:  VIHSRWAMLGALGCVFLELLSRNDVKFGEAVWFKVGSQIFSEGGLDYLGNPSLVHAPDLV

AT2G34420.1 photosystem II light harvesting complex gene B1B2

1.7e-72

82.5

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Query:  MAASSMALPSPSLAGQAVKLSPAASDLLGDGRVTMRKTVGKPKLVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGNYGWDTVGLSADPKTFAKNRELE
        MA+S+MAL SP+ AG+AVK  PAASD+LG GRVTMRKTV KPK   SGSPWYG DRVKYLGPFSGEPPSYLTGEFPG+YGWDT GLSADP+TFA+NRELE
Subjt:  MAASSMALPSPSLAGQAVKLSPAASDLLGDGRVTMRKTVGKPKLVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGNYGWDTVGLSADPKTFAKNRELE

Query:  VIHSRWAMLGALGCVFLELLSRNDVKFGEAVWFKVGSQIFSEGGLDYLGNPSLVHAPDLV
        VIHSRWAMLGALGCVF ELL+RN VKFGEAVWFK GSQIFS+GGLDYLGNPSLVHA  ++
Subjt:  VIHSRWAMLGALGCVFLELLSRNDVKFGEAVWFKVGSQIFSEGGLDYLGNPSLVHAPDLV

AT2G34430.1 light-harvesting chlorophyll-protein complex II subunit B1

5.5e-71

80.62

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Query:  MAASSMALPSPSLAGQAVKLSPAASDLLGDGRVTMRKTVGKPKLVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGNYGWDTVGLSADPKTFAKNRELE
        MAAS+MAL SP+L G+AVKLSPAAS++ G GR+TMRK   KP    SGSPWYG DRVKYLGPFSGEPPSYLTGEFPG+YGWDT GLSADP+TFA+NRELE
Subjt:  MAASSMALPSPSLAGQAVKLSPAASDLLGDGRVTMRKTVGKPKLVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGNYGWDTVGLSADPKTFAKNRELE

Query:  VIHSRWAMLGALGCVFLELLSRNDVKFGEAVWFKVGSQIFSEGGLDYLGNPSLVHAPDLV
        VIHSRWAMLGALGCVF ELL+RN VKFGEAVWFK GSQIFS+GGLDYLGNPSLVHA  ++
Subjt:  VIHSRWAMLGALGCVFLELLSRNDVKFGEAVWFKVGSQIFSEGGLDYLGNPSLVHAPDLV

Sequences

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CDS sequence

Show/hide CDS sequence

ATGGCAGCTTCATCGATGGCTCTGCCTTCCCCATCTCTGGCTGGCCAAGCCGTGAAACTGTCCCCTGCCGCCTCTGACCTCCTCGGCGACGGTCGTGTCACCATGAGGAA
AACCGTCGGCAAGCCCAAGCTCGTCTCCTCCGGAAGCCCATGGTACGGCCCAGATCGCGTCAAGTACTTGGGCCCATTCTCCGGCGAGCCCCCGTCCTATCTGACCGGCG
AGTTCCCCGGCAACTACGGCTGGGACACCGTCGGCCTCTCTGCCGACCCCAAGACCTTCGCCAAGAACCGCGAGCTCGAAGTAATCCACTCGAGATGGGCCATGCTCGGG
GCTCTCGGCTGCGTGTTCCTCGAGCTCCTCTCTCGCAACGACGTCAAATTTGGCGAGGCCGTGTGGTTCAAAGTCGGCTCGCAGATCTTCAGCGAAGGTGGGCTAGACTA
TTTGGGCAACCCGAGCCTAGTCCATGCTCCAGACCTCGTCGAAACGGGGAGGAGGGTTTCCTCCTCCCCATTCCAGCATTAA

mRNA sequence

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Protein sequence

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MAASSMALPSPSLAGQAVKLSPAASDLLGDGRVTMRKTVGKPKLVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGNYGWDTVGLSADPKTFAKNRELEVIHSRWAMLG
ALGCVFLELLSRNDVKFGEAVWFKVGSQIFSEGGLDYLGNPSLVHAPDLVETGRRVSSSPFQH

Spg028444 (gene) of Sponge gourd (cylindrica) v1 genome