CuGenDBv2

Gene ID	Spg028477
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	Serine/threonine-protein kinase RIO1
Genome location	scaffold7:14097888..14099564
RNA-Seq Expression	Spg028477
Synteny	Spg028477
Gene Ontology terms	GO:0006468 - protein phosphorylation (biological process) GO:0042254 - ribosome biogenesis (biological process) GO:0005737 - cytoplasm (cellular component) GO:0004674 - protein serine/threonine kinase activity (molecular function) GO:0004712 - protein serine/threonine/tyrosine kinase activity (molecular function) GO:0005524 - ATP binding (molecular function) GO:0016787 - hydrolase activity (molecular function) GO:0046872 - metal ion binding (molecular function) GO:0106310 - protein serine kinase activity (molecular function)
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

XP_008437198.1 PREDICTED: serine/threonine-protein kinase RIO1-like [Cucumis melo]

8.1e-12

82.35

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Query:  MSALEEKLDEIEPSTRNNDELEEEDEVEEDISWSSDPEIGDALDWLDAKED
        M A+EEK+DEIEPST NNDE  EEDE EED+SWSSD EIGDALDWLDAKED
Subjt:  MSALEEKLDEIEPSTRNNDELEEEDEVEEDISWSSDPEIGDALDWLDAKED

XP_022994310.1 serine/threonine-protein kinase RIO1-like isoform X1 [Cucurbita maxima]

1.1e-11

80.39

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Query:  MSALEEKLDEIEPSTRNNDELEEEDEVEEDISWSSDPEIGDALDWLDAKED
        MSA+EEKL+EIEPSTRNN+E  EED+ EED+SWSSD EIG+ALDWLDAKED
Subjt:  MSALEEKLDEIEPSTRNNDELEEEDEVEEDISWSSDPEIGDALDWLDAKED

XP_022994311.1 serine/threonine-protein kinase RIO1-like isoform X2 [Cucurbita maxima]

1.1e-11

80.39

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Query:  MSALEEKLDEIEPSTRNNDELEEEDEVEEDISWSSDPEIGDALDWLDAKED
        MSA+EEKL+EIEPSTRNN+E  EED+ EED+SWSSD EIG+ALDWLDAKED
Subjt:  MSALEEKLDEIEPSTRNNDELEEEDEVEEDISWSSDPEIGDALDWLDAKED

XP_023542499.1 serine/threonine-protein kinase RIO1-like isoform X1 [Cucurbita pepo subsp. pepo]

1.1e-11

80.39

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Query:  MSALEEKLDEIEPSTRNNDELEEEDEVEEDISWSSDPEIGDALDWLDAKED
        MSA+EEKL+EIEPSTRNN+E  EED+ EED+SWSSD EIG+ALDWLDAKED
Subjt:  MSALEEKLDEIEPSTRNNDELEEEDEVEEDISWSSDPEIGDALDWLDAKED

XP_023542500.1 serine/threonine-protein kinase RIO1-like isoform X2 [Cucurbita pepo subsp. pepo]

1.1e-11

80.39

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Query:  MSALEEKLDEIEPSTRNNDELEEEDEVEEDISWSSDPEIGDALDWLDAKED
        MSA+EEKL+EIEPSTRNN+E  EED+ EED+SWSSD EIG+ALDWLDAKED
Subjt:  MSALEEKLDEIEPSTRNNDELEEEDEVEEDISWSSDPEIGDALDWLDAKED

TrEMBL top hits

e value

%identity

Alignment

A0A1S3ATK0 Serine/threonine-protein kinase RIO1

3.9e-12

82.35

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Query:  MSALEEKLDEIEPSTRNNDELEEEDEVEEDISWSSDPEIGDALDWLDAKED
        M A+EEK+DEIEPST NNDE  EEDE EED+SWSSD EIGDALDWLDAKED
Subjt:  MSALEEKLDEIEPSTRNNDELEEEDEVEEDISWSSDPEIGDALDWLDAKED

A0A5D3BH21 Serine/threonine-protein kinase RIO1

3.9e-12

82.35

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Query:  MSALEEKLDEIEPSTRNNDELEEEDEVEEDISWSSDPEIGDALDWLDAKED
        M A+EEK+DEIEPST NNDE  EEDE EED+SWSSD EIGDALDWLDAKED
Subjt:  MSALEEKLDEIEPSTRNNDELEEEDEVEEDISWSSDPEIGDALDWLDAKED

A0A6J1GSU7 Serine/threonine-protein kinase RIO1

1.1e-11

78.43

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Query:  MSALEEKLDEIEPSTRNNDELEEEDEVEEDISWSSDPEIGDALDWLDAKED
        MSA+EEKL+EIEPSTRNN+E  EED+ E+D+SWSSD EIG+ALDWLDAKED
Subjt:  MSALEEKLDEIEPSTRNNDELEEEDEVEEDISWSSDPEIGDALDWLDAKED

A0A6J1JYS0 Serine/threonine-protein kinase RIO1

5.1e-12

80.39

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Query:  MSALEEKLDEIEPSTRNNDELEEEDEVEEDISWSSDPEIGDALDWLDAKED
        MSA+EEKL+EIEPSTRNN+E  EED+ EED+SWSSD EIG+ALDWLDAKED
Subjt:  MSALEEKLDEIEPSTRNNDELEEEDEVEEDISWSSDPEIGDALDWLDAKED

A0A6J1K0V1 Serine/threonine-protein kinase RIO1

5.1e-12

80.39

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Query:  MSALEEKLDEIEPSTRNNDELEEEDEVEEDISWSSDPEIGDALDWLDAKED
        MSA+EEKL+EIEPSTRNN+E  EED+ EED+SWSSD EIG+ALDWLDAKED
Subjt:  MSALEEKLDEIEPSTRNNDELEEEDEVEEDISWSSDPEIGDALDWLDAKED

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits	e value	%identity	Alignment
No hits found

Sequences

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CDS sequence

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ATGTCTGCACTGGAAGAGAAGCTAGATGAAATCGAACCTTCAACAAGGAATAATGATGAGTTGGAGGAAGAAGATGAAGTAGAGGAGGACATTTCATGGTCATCAGACCC
AGAGATTGGAGATGCATTGGATTGGTTGGATGCAAAAGAAGATATCTGA

mRNA sequence

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ATGTCTGCACTGGAAGAGAAGCTAGATGAAATCGAACCTTCAACAAGGAATAATGATGAGTTGGAGGAAGAAGATGAAGTAGAGGAGGACATTTCATGGTCATCAGACCC
AGAGATTGGAGATGCATTGGATTGGTTGGATGCAAAAGAAGATATCTGA

Protein sequence

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MSALEEKLDEIEPSTRNNDELEEEDEVEEDISWSSDPEIGDALDWLDAKEDI

Spg028477 (gene) of Sponge gourd (cylindrica) v1 genome