; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg028485 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg028485
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionReverse transcriptase domain-containing protein
Genome locationscaffold7:11249256..11253458
RNA-Seq ExpressionSpg028485
SyntenySpg028485
Gene Ontology termsNA
InterPro domainsIPR026960 - Reverse transcriptase zinc-binding domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF4367202.1 hypothetical protein F8388_006510 [Cannabis sativa]2.3e-2233.91Show/hide
Query:  VVVWSYKIKRGRYTVKSGYKLAMDNVHEP--SPSFDSLIANWWKALWNLNIPNKIKIFSWRVSLDILPSRMNLIKRHVHCDTIRPLCGKQNETTLHALWD
        +++W +  K G Y VKSGY++A +    P  S + D   A WWK  W+LN+P ++K+F W++  + LP++ NL+ R +  + I   CG+  ET  HALW+
Subjt:  VVVWSYKIKRGRYTVKSGYKLAMDNVHEP--SPSFDSLIANWWKALWNLNIPNKIKIFSWRVSLDILPSRMNLIKRHVHCDTIRPLCGKQNETTLHALWD

Query:  CKKVKKPWAHWSSVQPLVNGHFSTPIDLICKPQEILVFADMTIFVTSLWALWNNRNKV-----AVHGTQIQYWM
        C+KVKK W    S + + +   ++ +DL+ + +  L   +    V  LWA+W NRN+      ++HG ++  W+
Subjt:  CKKVKKPWAHWSSVQPLVNGHFSTPIDLICKPQEILVFADMTIFVTSLWALWNNRNKV-----AVHGTQIQYWM

KAF4384439.1 hypothetical protein G4B88_028513 [Cannabis sativa]3.0e-2233.91Show/hide
Query:  VVVWSYKIKRGRYTVKSGYKLAMDNVHEP--SPSFDSLIANWWKALWNLNIPNKIKIFSWRVSLDILPSRMNLIKRHVHCDTIRPLCGKQNETTLHALWD
        +++W +  K G Y VKSGY++A +    P  S + D   A WWK  W LN+P ++K+F W++  + LP++ NL+ R +  ++I   CG+ +ET  HALW+
Subjt:  VVVWSYKIKRGRYTVKSGYKLAMDNVHEP--SPSFDSLIANWWKALWNLNIPNKIKIFSWRVSLDILPSRMNLIKRHVHCDTIRPLCGKQNETTLHALWD

Query:  CKKVKKPWAHWSSVQPLVNGHFSTPIDLICKPQEILVFADMTIFVTSLWALWNNRNKV-----AVHGTQIQYWM
        C+KVKK W    S   + +   ++ +DL+ + +  LV  +    V  LWA+W NRN+       ++G ++  W+
Subjt:  CKKVKKPWAHWSSVQPLVNGHFSTPIDLICKPQEILVFADMTIFVTSLWALWNNRNKV-----AVHGTQIQYWM

XP_022150918.1 uncharacterized protein LOC111018954 [Momordica charantia]4.1e-2433.66Show/hide
Query:  SIIVANSSGKYVVVWSYKIKRGRYTVKSGYKLAMDN---VHEPSPSFDSLIANWWKALWNLNIPNKIKIFSWRVSLDILPSRMNLIKRHVHCDTIRPLCG
        SI +   + +  ++W+Y+ K G Y+V+SGYK+A+ N   V  PS S    +  WW   W ++IPNKIK+F WR+ LD LP+  NL KR V        CG
Subjt:  SIIVANSSGKYVVVWSYKIKRGRYTVKSGYKLAMDN---VHEPSPSFDSLIANWWKALWNLNIPNKIKIFSWRVSLDILPSRMNLIKRHVHCDTIRPLCG

Query:  KQNETTLHALWDCKKVKKPWAHWSSVQPLVNGHFS--TPIDLICKPQEILVFADMTIFVTSLWALWNNRNKVAVH-GTQIQYWMKGDPIDGASNYVMEYG
        +  E ++H  W CK  +  W         +N  F   +P  ++ +  E L  AD       +W LWN RN  A +  T+  + +  + ++ A+ Y ME+ 
Subjt:  KQNETTLHALWDCKKVKKPWAHWSSVQPLVNGHFS--TPIDLICKPQEILVFADMTIFVTSLWALWNNRNKVAVH-GTQIQYWMKGDPIDGASNYVMEYG

Query:  EA
        EA
Subjt:  EA

XP_023915006.1 uncharacterized protein LOC112026546 [Quercus suber]3.9e-2233.88Show/hide
Query:  KRGRYTVKSGYKLA---MDNVHEPSPSFDSLIANWWKALWNLNIPNKIKIFSWRVSLDILPSRMNLIKRHVHCDTIRPLCGKQNETTLHALWDCKKVKKP
        K+G +TVKS Y +A   +D+  +   S  + +   WK +W+  IP K+KIF+WR+ ++ LP+  NL  R VHC    PLC K  ETT HAL  C   K  
Subjt:  KRGRYTVKSGYKLA---MDNVHEPSPSFDSLIANWWKALWNLNIPNKIKIFSWRVSLDILPSRMNLIKRHVHCDTIRPLCGKQNETTLHALWDCKKVKKP

Query:  WAHWSSVQPLVNGHFSTPIDLICKPQEILVFADMTIFVTSLWALWNNRNKVAVHGT---QIQYWMKGDPIDGASNYVMEYGEA
        WAHW +   +++     P+D+     +    + + +F+   W++W NRN+    G+     Q W      D A   + EY EA
Subjt:  WAHWSSVQPLVNGHFSTPIDLICKPQEILVFADMTIFVTSLWALWNNRNKVAVHGT---QIQYWMKGDPIDGASNYVMEYGEA

XP_030924745.1 uncharacterized protein LOC115951731 [Quercus lobata]8.6e-2235.8Show/hide
Query:  VVWSYKIKRGRYTVKSGYKLAM--DNVHEPSPSFDSLIANWWKALWNLNIPNKIKIFSWRVSLDILPSRMNLIKRHVHCDTIRPLCGKQNETTLHALWDC
        ++WS     G +T KS YKL +  +  +    S       +W+ LW L +PNK+K F+WR   D LP+  NL++RH+  + I   C  Q E TLHALW C
Subjt:  VVWSYKIKRGRYTVKSGYKLAM--DNVHEPSPSFDSLIANWWKALWNLNIPNKIKIFSWRVSLDILPSRMNLIKRHVHCDTIRPLCGKQNETTLHALWDC

Query:  KKVKKPWAHWSSVQPLVNGHFSTPIDLICKPQEILVFADMTIFVTSLWALWNNRNKVAVHGT
          ++  W+  S  QP  N H S+   L+ K  ++       IF+T  W LWN RN + ++ T
Subjt:  KKVKKPWAHWSSVQPLVNGHFSTPIDLICKPQEILVFADMTIFVTSLWALWNNRNKVAVHGT

TrEMBL top hitse value%identityAlignment
A0A2N9GAE6 Uncharacterized protein2.6e-2432.75Show/hide
Query:  IIVANSSGKYVVVWSYKIKRGRYTVKSGYKLAMDNVHE--PSPSFDSLIANWWKALWNLNIPNKIKIFSWRVSLDILPSRMNLIKRHVHCDTIRPLCGKQ
        I ++N      ++W      G YTV+SGY+  +D   +  P  S  + + + W+++W+L IP K ++F+W+ S + LP+++NL KRH+   TI  +CG++
Subjt:  IIVANSSGKYVVVWSYKIKRGRYTVKSGYKLAMDNVHE--PSPSFDSLIANWWKALWNLNIPNKIKIFSWRVSLDILPSRMNLIKRHVHCDTIRPLCGKQ

Query:  NETTLHALWDCKKVKKPWAHWSSVQPLVNGHFSTPIDLICKPQEILVFADMTIFVTSLWALWNNRNKVAVH
        +E  +HALW CK+++  W++    Q L N       DL+ K  +    ++  +F+   WALW  RNK+ +H
Subjt:  NETTLHALWDCKKVKKPWAHWSSVQPLVNGHFSTPIDLICKPQEILVFADMTIFVTSLWALWNNRNKVAVH

A0A2N9GZG3 Sodium/hydrogen exchanger3.1e-2538.07Show/hide
Query:  KRGRYTVKSGYKL--AMDNVHEPSPSFDSLIANWWKALWNLNIPNKIKIFSWRVSLDILPSRMNLIKRHVHCDTIRPLCGKQNETTLHALWDCKKVKKPW
        K G+YTVKSGYK   A D   +PS S    +   WK +W+L +P KI++F WR   D LPS+ NL K+HV  D +  LCG   E  LHALW C   +  W
Subjt:  KRGRYTVKSGYKL--AMDNVHEPSPSFDSLIANWWKALWNLNIPNKIKIFSWRVSLDILPSRMNLIKRHVHCDTIRPLCGKQNETTLHALWDCKKVKKPW

Query:  AHWSSVQPLVNGHFSTPIDLICKPQEILVFADMTIFVTSLWALWNNRNKVAVHGTQIQYWMKGDPIDGASNYVMEY
           + ++ +   +F    DL C+  +     DM +F T+ WA+WN RNKV ++          D +D    +V EY
Subjt:  AHWSSVQPLVNGHFSTPIDLICKPQEILVFADMTIFVTSLWALWNNRNKVAVHGTQIQYWMKGDPIDGASNYVMEY

A0A2N9HK89 Uncharacterized protein3.1e-2538.07Show/hide
Query:  KRGRYTVKSGYKL--AMDNVHEPSPSFDSLIANWWKALWNLNIPNKIKIFSWRVSLDILPSRMNLIKRHVHCDTIRPLCGKQNETTLHALWDCKKVKKPW
        K G+YTVKSGYK   A D   +PS S    +   WK +W+L +P KI++F WR   D LPS+ NL K+HV  D +  LCG   E  LHALW C   +  W
Subjt:  KRGRYTVKSGYKL--AMDNVHEPSPSFDSLIANWWKALWNLNIPNKIKIFSWRVSLDILPSRMNLIKRHVHCDTIRPLCGKQNETTLHALWDCKKVKKPW

Query:  AHWSSVQPLVNGHFSTPIDLICKPQEILVFADMTIFVTSLWALWNNRNKVAVHGTQIQYWMKGDPIDGASNYVMEY
           + ++ +   +F    DL C+  +     DM +F T+ WA+WN RNKV ++          D +D    +V EY
Subjt:  AHWSSVQPLVNGHFSTPIDLICKPQEILVFADMTIFVTSLWALWNNRNKVAVHGTQIQYWMKGDPIDGASNYVMEY

A0A2N9ITS3 Reverse transcriptase domain-containing protein2.0e-2440.14Show/hide
Query:  GRYTVKSGYK-LAMDNVH-EPSPSFDSLIANWWKALWNLNIPNKIKIFSWRVSLDILPSRMNLIKRHVHCDTIRPLCGKQNETTLHALWDCKKVKKPWAH
        G+YTV+SGYK L  +N+  +PS S    +   WK +W+L +P KI++F WR   D LPS++NL K+HV  D    +C    E  LHALW+C + K  W  
Subjt:  GRYTVKSGYK-LAMDNVH-EPSPSFDSLIANWWKALWNLNIPNKIKIFSWRVSLDILPSRMNLIKRHVHCDTIRPLCGKQNETTLHALWDCKKVKKPWAH

Query:  WSSVQPLVNGHFSTPIDLICKPQEILVFADMTIFVTSLWALWNNRNK
         S ++ +    F T  DL C+  ++ +  DM +F T  WA+W  RNK
Subjt:  WSSVQPLVNGHFSTPIDLICKPQEILVFADMTIFVTSLWALWNNRNK

A0A6J1DAR4 uncharacterized protein LOC1110189542.0e-2433.66Show/hide
Query:  SIIVANSSGKYVVVWSYKIKRGRYTVKSGYKLAMDN---VHEPSPSFDSLIANWWKALWNLNIPNKIKIFSWRVSLDILPSRMNLIKRHVHCDTIRPLCG
        SI +   + +  ++W+Y+ K G Y+V+SGYK+A+ N   V  PS S    +  WW   W ++IPNKIK+F WR+ LD LP+  NL KR V        CG
Subjt:  SIIVANSSGKYVVVWSYKIKRGRYTVKSGYKLAMDN---VHEPSPSFDSLIANWWKALWNLNIPNKIKIFSWRVSLDILPSRMNLIKRHVHCDTIRPLCG

Query:  KQNETTLHALWDCKKVKKPWAHWSSVQPLVNGHFS--TPIDLICKPQEILVFADMTIFVTSLWALWNNRNKVAVH-GTQIQYWMKGDPIDGASNYVMEYG
        +  E ++H  W CK  +  W         +N  F   +P  ++ +  E L  AD       +W LWN RN  A +  T+  + +  + ++ A+ Y ME+ 
Subjt:  KQNETTLHALWDCKKVKKPWAHWSSVQPLVNGHFS--TPIDLICKPQEILVFADMTIFVTSLWALWNNRNKVAVH-GTQIQYWMKGDPIDGASNYVMEYG

Query:  EA
        EA
Subjt:  EA

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G09510.1 Ribonuclease H-like superfamily protein6.6e-1228.09Show/hide
Query:  YSIIVANSSGKYVVVWSYKIKRGRYTVKSGYKLAMDNVHEPSPSFDSL-----IANWWKALWNLNIPNKIKIFSWRVSLDILPSRMNLIKRHVHCDTIRP
        + I +A S     ++W+Y    G YTV+SGY L     H+PS +  ++       +    +WNL I  K+K F WR     L +   L  R +  D   P
Subjt:  YSIIVANSSGKYVVVWSYKIKRGRYTVKSGYKLAMDNVHEPSPSFDSL-----IANWWKALWNLNIPNKIKIFSWRVSLDILPSRMNLIKRHVHCDTIRP

Query:  LCGKQNETTLHALWDCKKVKKPWAHWSSV---QPLVNGHFSTPIDLICKPQEILVFADM--TIFVTSLWALWNNRNKV
         C ++NE+  HAL+ C      W    S      L++  F   I  I    +    +D    + V  +W +W  RN V
Subjt:  LCGKQNETTLHALWDCKKVKKPWAHWSSV---QPLVNGHFSTPIDLICKPQEILVFADM--TIFVTSLWALWNNRNKV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
GGTCTTCAGTCTTCAAGAAGTTTTGGGGTCTTGAAGTCTTGGAGAGTCTTTGGTCTTCAAGGATTGTTGAAGTCTTCTAGTCTTGGAGGGTCTTTAATCTTCAAGAAGTC
TTGGGGTCTTGAGAGTTCTCGCTGGATGGGCCCTGGTGACTTTTGGGCCGAACAACTTGGGCTTGGACTTTATTGGTCTTGGGCTCAACTATTTAGTCTTGAGTCTGGTT
CATATTTGACCCAAGACCAACGCCACCATGCATTGCCTCAACCCCCGTCGGTCCATCTTCGTCTCCCTCCCCTCGAAAACCTTGAAAGACTTAATCCTCCATTTCCCACC
ATTTTCCACCCCCAACACAGAGTGTATACTAATCCCTACCTCTCGCATCGCGCCGACTACCCACATCCGCTGTGCCAACGGCCTTCTTCCGCCGCTTCGTCAAGACTCTT
GCTCGCCCCACATCCTCCATCGATTCTCCTTCTGCTCGAGGACTGTACAATTTCTCAGAAACTCAAACTAAGACAGGAAGAAGTTGACGCAAGTGCTGATACAGGGGAAG
ACCATTCTATTGAAGACGATTACTCCTCAAGCGATAGAGGAGACGAAGGAGATAGCAAGAAAAAGAAAACGGTAGACAAAAAGGATGAGAAGAGACCCAAAGGGAAGGAC
AGACGGACAAAAAGGGATGAAAGTGAGGAGGTCGAACCCACCAGAGCGGTTTGTATTGATAAATACTATTCCATCATTGTTGCAAACTCCTCTGGAAAGTATGTTGTGGT
GTGGTCATATAAAATCAAACGAGGAAGATACACGGTCAAGAGTGGCTACAAGCTTGCAATGGATAATGTCCATGAGCCGTCACCATCCTTTGACTCGTTAATAGCCAACT
GGTGGAAGGCCTTATGGAATCTCAACATTCCAAACAAAATAAAGATCTTTAGTTGGAGAGTCAGCCTCGACATTTTACCCTCCAGAATGAACCTCATCAAACGGCATGTT
CATTGTGATACAATCCGCCCTTTATGTGGGAAACAGAATGAAACAACGCTCCATGCGTTATGGGATTGTAAAAAGGTAAAGAAGCCCTGGGCTCATTGGAGCTCAGTGCA
ACCTCTTGTCAATGGTCATTTCTCTACTCCTATTGACCTTATTTGCAAGCCACAGGAGATTTTGGTTTTTGCAGATATGACAATCTTTGTGACAAGTTTGTGGGCTCTGT
GGAACAATCGCAACAAAGTAGCTGTTCACGGGACGCAAATTCAGTATTGGATGAAAGGAGATCCAATTGACGGGGCTTCAAATTACGTTATGGAGTATGGCGAGGCCTAA
mRNA sequenceShow/hide mRNA sequence
GGTCTTCAGTCTTCAAGAAGTTTTGGGGTCTTGAAGTCTTGGAGAGTCTTTGGTCTTCAAGGATTGTTGAAGTCTTCTAGTCTTGGAGGGTCTTTAATCTTCAAGAAGTC
TTGGGGTCTTGAGAGTTCTCGCTGGATGGGCCCTGGTGACTTTTGGGCCGAACAACTTGGGCTTGGACTTTATTGGTCTTGGGCTCAACTATTTAGTCTTGAGTCTGGTT
CATATTTGACCCAAGACCAACGCCACCATGCATTGCCTCAACCCCCGTCGGTCCATCTTCGTCTCCCTCCCCTCGAAAACCTTGAAAGACTTAATCCTCCATTTCCCACC
ATTTTCCACCCCCAACACAGAGTGTATACTAATCCCTACCTCTCGCATCGCGCCGACTACCCACATCCGCTGTGCCAACGGCCTTCTTCCGCCGCTTCGTCAAGACTCTT
GCTCGCCCCACATCCTCCATCGATTCTCCTTCTGCTCGAGGACTGTACAATTTCTCAGAAACTCAAACTAAGACAGGAAGAAGTTGACGCAAGTGCTGATACAGGGGAAG
ACCATTCTATTGAAGACGATTACTCCTCAAGCGATAGAGGAGACGAAGGAGATAGCAAGAAAAAGAAAACGGTAGACAAAAAGGATGAGAAGAGACCCAAAGGGAAGGAC
AGACGGACAAAAAGGGATGAAAGTGAGGAGGTCGAACCCACCAGAGCGGTTTGTATTGATAAATACTATTCCATCATTGTTGCAAACTCCTCTGGAAAGTATGTTGTGGT
GTGGTCATATAAAATCAAACGAGGAAGATACACGGTCAAGAGTGGCTACAAGCTTGCAATGGATAATGTCCATGAGCCGTCACCATCCTTTGACTCGTTAATAGCCAACT
GGTGGAAGGCCTTATGGAATCTCAACATTCCAAACAAAATAAAGATCTTTAGTTGGAGAGTCAGCCTCGACATTTTACCCTCCAGAATGAACCTCATCAAACGGCATGTT
CATTGTGATACAATCCGCCCTTTATGTGGGAAACAGAATGAAACAACGCTCCATGCGTTATGGGATTGTAAAAAGGTAAAGAAGCCCTGGGCTCATTGGAGCTCAGTGCA
ACCTCTTGTCAATGGTCATTTCTCTACTCCTATTGACCTTATTTGCAAGCCACAGGAGATTTTGGTTTTTGCAGATATGACAATCTTTGTGACAAGTTTGTGGGCTCTGT
GGAACAATCGCAACAAAGTAGCTGTTCACGGGACGCAAATTCAGTATTGGATGAAAGGAGATCCAATTGACGGGGCTTCAAATTACGTTATGGAGTATGGCGAGGCCTAA
Protein sequenceShow/hide protein sequence
GLQSSRSFGVLKSWRVFGLQGLLKSSSLGGSLIFKKSWGLESSRWMGPGDFWAEQLGLGLYWSWAQLFSLESGSYLTQDQRHHALPQPPSVHLRLPPLENLERLNPPFPT
IFHPQHRVYTNPYLSHRADYPHPLCQRPSSAASSRLLLAPHPPSILLLLEDCTISQKLKLRQEEVDASADTGEDHSIEDDYSSSDRGDEGDSKKKKTVDKKDEKRPKGKD
RRTKRDESEEVEPTRAVCIDKYYSIIVANSSGKYVVVWSYKIKRGRYTVKSGYKLAMDNVHEPSPSFDSLIANWWKALWNLNIPNKIKIFSWRVSLDILPSRMNLIKRHV
HCDTIRPLCGKQNETTLHALWDCKKVKKPWAHWSSVQPLVNGHFSTPIDLICKPQEILVFADMTIFVTSLWALWNNRNKVAVHGTQIQYWMKGDPIDGASNYVMEYGEA