; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg028497 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg028497
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionU-box domain-containing protein 62-like
Genome locationscaffold7:11557481..11561968
RNA-Seq ExpressionSpg028497
SyntenySpg028497
Gene Ontology termsGO:0016567 - protein ubiquitination (biological process)
GO:0004842 - ubiquitin-protein transferase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022146864.1 U-box domain-containing protein 62 isoform X1 [Momordica charantia]2.9e-7094.48Show/hide
Query:  KSCYTCSQSVSEDSIAQNLSLQAAVEAFRREEELLFYRSPKRRRERFEQDKGGYGDSTLMDTPRGRGVQFPFAVTDRVIIKGNKRTPQRFVGREAVVTTQ
        KSCY+CSQSVSEDSIAQNLSLQAAV+AFRREEE+LFYRSPKRRRERFEQDKGGYGD TLMDTPRGRGVQFPF VTDRVIIKGNKRTPQRFVGREAVVTTQ
Subjt:  KSCYTCSQSVSEDSIAQNLSLQAAVEAFRREEELLFYRSPKRRRERFEQDKGGYGDSTLMDTPRGRGVQFPFAVTDRVIIKGNKRTPQRFVGREAVVTTQ

Query:  CLNGWYVVKTLDNAESVKLQYRSLAKVPNDAASKTITRKIAPHWL
        CLNGWYVVKTLDNAESVKLQYRSLAKVPNDAASK I RKIAP+WL
Subjt:  CLNGWYVVKTLDNAESVKLQYRSLAKVPNDAASKTITRKIAPHWL

XP_022146865.1 U-box domain-containing protein 62 isoform X2 [Momordica charantia]2.9e-7094.48Show/hide
Query:  KSCYTCSQSVSEDSIAQNLSLQAAVEAFRREEELLFYRSPKRRRERFEQDKGGYGDSTLMDTPRGRGVQFPFAVTDRVIIKGNKRTPQRFVGREAVVTTQ
        KSCY+CSQSVSEDSIAQNLSLQAAV+AFRREEE+LFYRSPKRRRERFEQDKGGYGD TLMDTPRGRGVQFPF VTDRVIIKGNKRTPQRFVGREAVVTTQ
Subjt:  KSCYTCSQSVSEDSIAQNLSLQAAVEAFRREEELLFYRSPKRRRERFEQDKGGYGDSTLMDTPRGRGVQFPFAVTDRVIIKGNKRTPQRFVGREAVVTTQ

Query:  CLNGWYVVKTLDNAESVKLQYRSLAKVPNDAASKTITRKIAPHWL
        CLNGWYVVKTLDNAESVKLQYRSLAKVPNDAASK I RKIAP+WL
Subjt:  CLNGWYVVKTLDNAESVKLQYRSLAKVPNDAASKTITRKIAPHWL

XP_022942528.1 U-box domain-containing protein 62 isoform X1 [Cucurbita moschata]1.2e-7195.17Show/hide
Query:  KSCYTCSQSVSEDSIAQNLSLQAAVEAFRREEELLFYRSPKRRRERFEQDKGGYGDSTLMDTPRGRGVQFPFAVTDRVIIKGNKRTPQRFVGREAVVTTQ
        KSCY+CSQSVSEDSIAQNLSLQAAV+AFRREEELLFYRSPKRRRERFEQDKGGYGDSTLMDTPRGRGVQFPFAVTDRVIIKGNKRTPQRFVGREAVVT Q
Subjt:  KSCYTCSQSVSEDSIAQNLSLQAAVEAFRREEELLFYRSPKRRRERFEQDKGGYGDSTLMDTPRGRGVQFPFAVTDRVIIKGNKRTPQRFVGREAVVTTQ

Query:  CLNGWYVVKTLDNAESVKLQYRSLAKVPNDAASKTITRKIAPHWL
        CLNGWYVVKTLDNAESVKLQYRSLA+VPNDAASKTIT+K+AP+WL
Subjt:  CLNGWYVVKTLDNAESVKLQYRSLAKVPNDAASKTITRKIAPHWL

XP_022984283.1 U-box domain-containing protein 62-like [Cucurbita maxima]4.5e-7194.48Show/hide
Query:  KSCYTCSQSVSEDSIAQNLSLQAAVEAFRREEELLFYRSPKRRRERFEQDKGGYGDSTLMDTPRGRGVQFPFAVTDRVIIKGNKRTPQRFVGREAVVTTQ
        KSCY+CSQSVSEDSIAQNLSLQAAV+AF REEELLFYRSPKRRRERFEQDKGGYGDSTLMDTPRGRGVQFPFAVTDRVIIKGNKRTPQRFVGREAVVT Q
Subjt:  KSCYTCSQSVSEDSIAQNLSLQAAVEAFRREEELLFYRSPKRRRERFEQDKGGYGDSTLMDTPRGRGVQFPFAVTDRVIIKGNKRTPQRFVGREAVVTTQ

Query:  CLNGWYVVKTLDNAESVKLQYRSLAKVPNDAASKTITRKIAPHWL
        CLNGWYVVKTLDNAESVKLQYRSLA+VPNDAASKTIT+K+AP+WL
Subjt:  CLNGWYVVKTLDNAESVKLQYRSLAKVPNDAASKTITRKIAPHWL

XP_023541871.1 U-box domain-containing protein 62 [Cucurbita pepo subsp. pepo]1.2e-7195.17Show/hide
Query:  KSCYTCSQSVSEDSIAQNLSLQAAVEAFRREEELLFYRSPKRRRERFEQDKGGYGDSTLMDTPRGRGVQFPFAVTDRVIIKGNKRTPQRFVGREAVVTTQ
        KSCY+CSQSVSEDSIAQNLSLQAAV+AFRREEELLFYRSPKRRRERFEQDKGGYGDSTLMDTPRGRGVQFPFAVTDRVIIKGNKRTPQRFVGREAVVT Q
Subjt:  KSCYTCSQSVSEDSIAQNLSLQAAVEAFRREEELLFYRSPKRRRERFEQDKGGYGDSTLMDTPRGRGVQFPFAVTDRVIIKGNKRTPQRFVGREAVVTTQ

Query:  CLNGWYVVKTLDNAESVKLQYRSLAKVPNDAASKTITRKIAPHWL
        CLNGWYVVKTLDNAESVKLQYRSLA+VPNDAASKTIT+K+AP+WL
Subjt:  CLNGWYVVKTLDNAESVKLQYRSLAKVPNDAASKTITRKIAPHWL

TrEMBL top hitse value%identityAlignment
A0A5D3BAD9 U-box domain-containing protein 62-like isoform X17.7e-6993.1Show/hide
Query:  KSCYTCSQSVSEDSIAQNLSLQAAVEAFRREEELLFYRSPKRRRERFEQDKGGYGDSTLMDTPRGRGVQFPFAVTDRVIIKGNKRTPQRFVGREAVVTTQ
        KSCY+CSQSVSEDSIAQNLSLQAAV AFRREEELLFY SPKRRRERFEQDKGGYGD TLM T RGRGVQFPFAVTDRVIIKGNKRTPQRFVGREAVVTTQ
Subjt:  KSCYTCSQSVSEDSIAQNLSLQAAVEAFRREEELLFYRSPKRRRERFEQDKGGYGDSTLMDTPRGRGVQFPFAVTDRVIIKGNKRTPQRFVGREAVVTTQ

Query:  CLNGWYVVKTLDNAESVKLQYRSLAKVPNDAASKTITRKIAPHWL
        CLNGWYVVKTLDNAESVKLQYRSLAKVPNDA SKTITRK+ P+WL
Subjt:  CLNGWYVVKTLDNAESVKLQYRSLAKVPNDAASKTITRKIAPHWL

A0A6J1CYI7 U-box domain-containing protein 62 isoform X21.4e-7094.48Show/hide
Query:  KSCYTCSQSVSEDSIAQNLSLQAAVEAFRREEELLFYRSPKRRRERFEQDKGGYGDSTLMDTPRGRGVQFPFAVTDRVIIKGNKRTPQRFVGREAVVTTQ
        KSCY+CSQSVSEDSIAQNLSLQAAV+AFRREEE+LFYRSPKRRRERFEQDKGGYGD TLMDTPRGRGVQFPF VTDRVIIKGNKRTPQRFVGREAVVTTQ
Subjt:  KSCYTCSQSVSEDSIAQNLSLQAAVEAFRREEELLFYRSPKRRRERFEQDKGGYGDSTLMDTPRGRGVQFPFAVTDRVIIKGNKRTPQRFVGREAVVTTQ

Query:  CLNGWYVVKTLDNAESVKLQYRSLAKVPNDAASKTITRKIAPHWL
        CLNGWYVVKTLDNAESVKLQYRSLAKVPNDAASK I RKIAP+WL
Subjt:  CLNGWYVVKTLDNAESVKLQYRSLAKVPNDAASKTITRKIAPHWL

A0A6J1CZA9 U-box domain-containing protein 62 isoform X11.4e-7094.48Show/hide
Query:  KSCYTCSQSVSEDSIAQNLSLQAAVEAFRREEELLFYRSPKRRRERFEQDKGGYGDSTLMDTPRGRGVQFPFAVTDRVIIKGNKRTPQRFVGREAVVTTQ
        KSCY+CSQSVSEDSIAQNLSLQAAV+AFRREEE+LFYRSPKRRRERFEQDKGGYGD TLMDTPRGRGVQFPF VTDRVIIKGNKRTPQRFVGREAVVTTQ
Subjt:  KSCYTCSQSVSEDSIAQNLSLQAAVEAFRREEELLFYRSPKRRRERFEQDKGGYGDSTLMDTPRGRGVQFPFAVTDRVIIKGNKRTPQRFVGREAVVTTQ

Query:  CLNGWYVVKTLDNAESVKLQYRSLAKVPNDAASKTITRKIAPHWL
        CLNGWYVVKTLDNAESVKLQYRSLAKVPNDAASK I RKIAP+WL
Subjt:  CLNGWYVVKTLDNAESVKLQYRSLAKVPNDAASKTITRKIAPHWL

A0A6J1FV24 U-box domain-containing protein 62 isoform X15.7e-7295.17Show/hide
Query:  KSCYTCSQSVSEDSIAQNLSLQAAVEAFRREEELLFYRSPKRRRERFEQDKGGYGDSTLMDTPRGRGVQFPFAVTDRVIIKGNKRTPQRFVGREAVVTTQ
        KSCY+CSQSVSEDSIAQNLSLQAAV+AFRREEELLFYRSPKRRRERFEQDKGGYGDSTLMDTPRGRGVQFPFAVTDRVIIKGNKRTPQRFVGREAVVT Q
Subjt:  KSCYTCSQSVSEDSIAQNLSLQAAVEAFRREEELLFYRSPKRRRERFEQDKGGYGDSTLMDTPRGRGVQFPFAVTDRVIIKGNKRTPQRFVGREAVVTTQ

Query:  CLNGWYVVKTLDNAESVKLQYRSLAKVPNDAASKTITRKIAPHWL
        CLNGWYVVKTLDNAESVKLQYRSLA+VPNDAASKTIT+K+AP+WL
Subjt:  CLNGWYVVKTLDNAESVKLQYRSLAKVPNDAASKTITRKIAPHWL

A0A6J1JA32 U-box domain-containing protein 62-like2.2e-7194.48Show/hide
Query:  KSCYTCSQSVSEDSIAQNLSLQAAVEAFRREEELLFYRSPKRRRERFEQDKGGYGDSTLMDTPRGRGVQFPFAVTDRVIIKGNKRTPQRFVGREAVVTTQ
        KSCY+CSQSVSEDSIAQNLSLQAAV+AF REEELLFYRSPKRRRERFEQDKGGYGDSTLMDTPRGRGVQFPFAVTDRVIIKGNKRTPQRFVGREAVVT Q
Subjt:  KSCYTCSQSVSEDSIAQNLSLQAAVEAFRREEELLFYRSPKRRRERFEQDKGGYGDSTLMDTPRGRGVQFPFAVTDRVIIKGNKRTPQRFVGREAVVTTQ

Query:  CLNGWYVVKTLDNAESVKLQYRSLAKVPNDAASKTITRKIAPHWL
        CLNGWYVVKTLDNAESVKLQYRSLA+VPNDAASKTIT+K+AP+WL
Subjt:  CLNGWYVVKTLDNAESVKLQYRSLAKVPNDAASKTITRKIAPHWL

SwissProt top hitse value%identityAlignment
Q58FY4 U-box domain-containing protein 632.4e-3550.67Show/hide
Query:  MSSQKSCYTCSQSVSEDSIAQNLSLQAAVEAFRREEELLFYRSPKRRRERFEQDKGGYGDSTLMDTPR-GRGVQFPFAVTDRVIIKGNKRTPQRFVGREA
        +   K+C+TCSQ   E S   NLSL+  V AFR+EE+     + KRR+ER +Q K  +    + +TP+  RG+QFPF++ D +II+GNKRTP RFVGR A
Subjt:  MSSQKSCYTCSQSVSEDSIAQNLSLQAAVEAFRREEELLFYRSPKRRRERFEQDKGGYGDSTLMDTPR-GRGVQFPFAVTDRVIIKGNKRTPQRFVGREA

Query:  VVTTQCLNGWYVVKTLDNAESVKLQYRSLAKVPNDAASKTITRKIAPHWL
        V+ TQCLNGWYVVKT+DN+ES+KLQ+ SLAK+ +++++K    ++ P WL
Subjt:  VVTTQCLNGWYVVKTLDNAESVKLQYRSLAKVPNDAASKTITRKIAPHWL

Q6DBN5 U-box domain-containing protein 621.4e-4361.07Show/hide
Query:  MSSQKSCYTCSQSVSEDSIAQNLSLQAAVEAFRREEELLFYRSPKRRRERFEQDKGGYGDSTLMDTPRGRGVQFPFAVTDRVIIKGNKRTPQRFVGREAV
        +   K+C TCSQ VSEDSI  NL+L+ AV+AF REE        KR+RE F+Q++  +G +      R +   FPFAV DRVIIKGNKRTP RFVGREAV
Subjt:  MSSQKSCYTCSQSVSEDSIAQNLSLQAAVEAFRREEELLFYRSPKRRRERFEQDKGGYGDSTLMDTPRGRGVQFPFAVTDRVIIKGNKRTPQRFVGREAV

Query:  VTTQCLNGWYVVKTLDNAESVKLQYRSLAKVPNDAASKTITRKIAPHWL
        VTTQCLNGWYVVKTLDNAESVKLQYRSLAK P D ++K    K+  +WL
Subjt:  VTTQCLNGWYVVKTLDNAESVKLQYRSLAKVPNDAASKTITRKIAPHWL

Arabidopsis top hitse value%identityAlignment
AT2G40640.1 RING/U-box superfamily protein1.7e-3650.67Show/hide
Query:  MSSQKSCYTCSQSVSEDSIAQNLSLQAAVEAFRREEELLFYRSPKRRRERFEQDKGGYGDSTLMDTPR-GRGVQFPFAVTDRVIIKGNKRTPQRFVGREA
        +   K+C+TCSQ   E S   NLSL+  V AFR+EE+     + KRR+ER +Q K  +    + +TP+  RG+QFPF++ D +II+GNKRTP RFVGR A
Subjt:  MSSQKSCYTCSQSVSEDSIAQNLSLQAAVEAFRREEELLFYRSPKRRRERFEQDKGGYGDSTLMDTPR-GRGVQFPFAVTDRVIIKGNKRTPQRFVGREA

Query:  VVTTQCLNGWYVVKTLDNAESVKLQYRSLAKVPNDAASKTITRKIAPHWL
        V+ TQCLNGWYVVKT+DN+ES+KLQ+ SLAK+ +++++K    ++ P WL
Subjt:  VVTTQCLNGWYVVKTLDNAESVKLQYRSLAKVPNDAASKTITRKIAPHWL

AT2G40640.2 RING/U-box superfamily protein2.8e-2350.91Show/hide
Query:  MSSQKSCYTCSQSVSEDSIAQNLSLQAAVEAFRREEELLFYRSPKRRRERFEQDKGGYGDSTLMDTPR-GRGVQFPFAVTDRVIIKGNKRTPQRFVGREA
        +   K+C+TCSQ   E S   NLSL+  V AFR+EE+     + KRR+ER +Q K  +    + +TP+  RG+QFPF++ D +II+GNKRTP RFVGR A
Subjt:  MSSQKSCYTCSQSVSEDSIAQNLSLQAAVEAFRREEELLFYRSPKRRRERFEQDKGGYGDSTLMDTPR-GRGVQFPFAVTDRVIIKGNKRTPQRFVGREA

Query:  VVTTQCLNGW
        V+ TQCLNGW
Subjt:  VVTTQCLNGW

AT3G19895.1 RING/U-box superfamily protein2.0e-2442.75Show/hide
Query:  CYTCSQSVSEDSIAQNLSLQAAVEAFRREEE-LLFYRSPKRRRERFEQDKGGY--GDSTLMDTPRGRGVQFPFAVTDRVIIKGNKRTPQRFVGREAVVTT
        C  C+  +   S+  N +L+AA  A +++++  LF+ +  RRR +   D+     GD    D    R V +PFAV ++V+IKGN+RTP++FVG+EA+VT+
Subjt:  CYTCSQSVSEDSIAQNLSLQAAVEAFRREEE-LLFYRSPKRRRERFEQDKGGY--GDSTLMDTPRGRGVQFPFAVTDRVIIKGNKRTPQRFVGREAVVTT

Query:  QCLNGWYVVKTLDNAESVKLQYRSLAKVPND
        QCLNGWY++K +++ ++V+LQYRSL K+ ND
Subjt:  QCLNGWYVVKTLDNAESVKLQYRSLAKVPND

AT5G05230.1 RING/U-box superfamily protein1.0e-4461.07Show/hide
Query:  MSSQKSCYTCSQSVSEDSIAQNLSLQAAVEAFRREEELLFYRSPKRRRERFEQDKGGYGDSTLMDTPRGRGVQFPFAVTDRVIIKGNKRTPQRFVGREAV
        +   K+C TCSQ VSEDSI  NL+L+ AV+AF REE        KR+RE F+Q++  +G +      R +   FPFAV DRVIIKGNKRTP RFVGREAV
Subjt:  MSSQKSCYTCSQSVSEDSIAQNLSLQAAVEAFRREEELLFYRSPKRRRERFEQDKGGYGDSTLMDTPRGRGVQFPFAVTDRVIIKGNKRTPQRFVGREAV

Query:  VTTQCLNGWYVVKTLDNAESVKLQYRSLAKVPNDAASKTITRKIAPHWL
        VTTQCLNGWYVVKTLDNAESVKLQYRSLAK P D ++K    K+  +WL
Subjt:  VTTQCLNGWYVVKTLDNAESVKLQYRSLAKVPNDAASKTITRKIAPHWL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCTTCCCAGAAATCTTGTTACACGTGTTCTCAGTCAGTTTCTGAAGACTCAATTGCTCAAAATTTATCTCTTCAAGCTGCAGTCGAAGCTTTCCGTCGGGAAGAAGA
ATTGTTATTTTACCGCTCACCAAAGAGGAGAAGGGAGAGGTTTGAGCAGGACAAGGGTGGTTATGGTGATTCAACTCTCATGGATACTCCAAGGGGTCGAGGTGTTCAGT
TTCCTTTTGCAGTGACAGATCGGGTAATTATCAAGGGGAACAAGAGGACACCACAGCGGTTTGTGGGACGTGAGGCTGTTGTTACAACACAGTGCTTGAATGGATGGTAT
GTGGTGAAAACACTAGACAATGCAGAGAGTGTAAAGTTGCAATACCGCTCGCTTGCGAAGGTTCCGAATGATGCAGCATCAAAAACGATAACAAGGAAGATCGCACCGCA
TTGGCTTTAG
mRNA sequenceShow/hide mRNA sequence
ATGTCTTCCCAGAAATCTTGTTACACGTGTTCTCAGTCAGTTTCTGAAGACTCAATTGCTCAAAATTTATCTCTTCAAGCTGCAGTCGAAGCTTTCCGTCGGGAAGAAGA
ATTGTTATTTTACCGCTCACCAAAGAGGAGAAGGGAGAGGTTTGAGCAGGACAAGGGTGGTTATGGTGATTCAACTCTCATGGATACTCCAAGGGGTCGAGGTGTTCAGT
TTCCTTTTGCAGTGACAGATCGGGTAATTATCAAGGGGAACAAGAGGACACCACAGCGGTTTGTGGGACGTGAGGCTGTTGTTACAACACAGTGCTTGAATGGATGGTAT
GTGGTGAAAACACTAGACAATGCAGAGAGTGTAAAGTTGCAATACCGCTCGCTTGCGAAGGTTCCGAATGATGCAGCATCAAAAACGATAACAAGGAAGATCGCACCGCA
TTGGCTTTAG
Protein sequenceShow/hide protein sequence
MSSQKSCYTCSQSVSEDSIAQNLSLQAAVEAFRREEELLFYRSPKRRRERFEQDKGGYGDSTLMDTPRGRGVQFPFAVTDRVIIKGNKRTPQRFVGREAVVTTQCLNGWY
VVKTLDNAESVKLQYRSLAKVPNDAASKTITRKIAPHWL