; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg028512 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg028512
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
Descriptionbinding partner of ACD11 1-like
Genome locationscaffold7:12451754..12456869
RNA-Seq ExpressionSpg028512
SyntenySpg028512
Gene Ontology termsGO:0003723 - RNA binding (molecular function)
InterPro domainsIPR000504 - RNA recognition motif domain
IPR012677 - Nucleotide-binding alpha-beta plait domain superfamily
IPR035979 - RNA-binding domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6599926.1 Binding partner of ACD11 1, partial [Cucurbita argyrosperma subsp. sororia]1.8e-13796.4Show/hide
Query:  LMMRTVKVSNISKATSERDIKEFFSFSGEILYVEMQRETENTQVAYVTYKDSQGADTAILLTGAKIGDLSVTITLVENYHLPPEAMSSILDKRQTVSGIA
        + MRTVKVSNISKATSERDI+EFFSFSGEILYVEMQRETENTQVAYVTYKDSQGADTAILLTGAKIGDLSVTI LVENYHLPPEAMSSILDKRQTV+G A
Subjt:  LMMRTVKVSNISKATSERDIKEFFSFSGEILYVEMQRETENTQVAYVTYKDSQGADTAILLTGAKIGDLSVTITLVENYHLPPEAMSSILDKRQTVSGIA

Query:  PNQAEDVVSTMLAKGFILGKDALNKAKAFDERHQLTSNASATVASIDRKMGITEKITAGTAVVNEKVREMDEMFQVSEKTKSALAVAEQKASSAGTALMS
        PNQAEDVVSTMLAKGFILGKDA+NKAKAFDERHQLTSNASATV SIDRKMGITEKITAGTAVVNEKVREMDE FQVSEKTKSALAVAEQKASSAGTALMS
Subjt:  PNQAEDVVSTMLAKGFILGKDALNKAKAFDERHQLTSNASATVASIDRKMGITEKITAGTAVVNEKVREMDEMFQVSEKTKSALAVAEQKASSAGTALMS

Query:  NYYVLTGAAWFSNAVTAVTKAAEEVTQMTKAKVEKAEEEKKESIYRERTGIINNFAELHLDEPLPGEPAIVPVNSADR
        NYYV TGAAWFSNAVTAVTKAAEEVTQMTKAKVEKAEEEKKESIYRERTGIINNFAELHLDEPLPGEPAIVPVNSADR
Subjt:  NYYVLTGAAWFSNAVTAVTKAAEEVTQMTKAKVEKAEEEKKESIYRERTGIINNFAELHLDEPLPGEPAIVPVNSADR

XP_004142266.1 binding partner of ACD11 1 [Cucumis sativus]6.8e-13796.4Show/hide
Query:  LMMRTVKVSNISKATSERDIKEFFSFSGEILYVEMQRETENTQVAYVTYKDSQGADTAILLTGAKIGDLSVTITLVENYHLPPEAMSSILDKRQTVSGIA
        + MRTVKVSNISK TSERDIKEFFSFSGEILYVEMQRE+ENTQVAYVTYKDSQGADTAILLTGAKIGDLSVTITLVENYHLPPEAMSSILDKRQTV+GIA
Subjt:  LMMRTVKVSNISKATSERDIKEFFSFSGEILYVEMQRETENTQVAYVTYKDSQGADTAILLTGAKIGDLSVTITLVENYHLPPEAMSSILDKRQTVSGIA

Query:  PNQAEDVVSTMLAKGFILGKDALNKAKAFDERHQLTSNASATVASIDRKMGITEKITAGTAVVNEKVREMDEMFQVSEKTKSALAVAEQKASSAGTALMS
        PNQAEDVVSTMLAKGFILGKDALNKAKAFDER QLTSNASATVASIDRKMGITEKITAGTAVVNEKVREMDEMFQV EKTKSALAVAEQKA+SAGTALMS
Subjt:  PNQAEDVVSTMLAKGFILGKDALNKAKAFDERHQLTSNASATVASIDRKMGITEKITAGTAVVNEKVREMDEMFQVSEKTKSALAVAEQKASSAGTALMS

Query:  NYYVLTGAAWFSNAVTAVTKAAEEVTQMTKAKVEKAEEEKKESIYRERTGIINNFAELHLDEPLPGEPAIVPVNSADR
        NYYVLTGAAWFSNAVTAVTKAAEEVTQMTK KVEKAEEEKKESIYRERTGII+NFAELHLDEPLPGEPAIVPVNSADR
Subjt:  NYYVLTGAAWFSNAVTAVTKAAEEVTQMTKAKVEKAEEEKKESIYRERTGIINNFAELHLDEPLPGEPAIVPVNSADR

XP_022941586.1 binding partner of ACD11 1-like isoform X1 [Cucurbita moschata]4.0e-13793.13Show/hide
Query:  RSAAFAFGY-LFSLMMRTVKVSNISKATSERDIKEFFSFSGEILYVEMQRETENTQVAYVTYKDSQGADTAILLTGAKIGDLSVTITLVENYHLPPEAMS
        RS  F   + ++   MRTVKVSNISKATSERDI+EFFSFSGEILYVEMQRETENTQVAYVTYKDSQGADTAILLTGAKIGDLSVTI LVENYHLPPEAMS
Subjt:  RSAAFAFGY-LFSLMMRTVKVSNISKATSERDIKEFFSFSGEILYVEMQRETENTQVAYVTYKDSQGADTAILLTGAKIGDLSVTITLVENYHLPPEAMS

Query:  SILDKRQTVSGIAPNQAEDVVSTMLAKGFILGKDALNKAKAFDERHQLTSNASATVASIDRKMGITEKITAGTAVVNEKVREMDEMFQVSEKTKSALAVA
        SILDKRQTV+G APNQAEDVVSTMLAKGFILGKDA+NKAKAFDERHQLTSNASATV SIDRKMGITEKITAGTAVVNEKVREMDE FQVSEKTKSALAVA
Subjt:  SILDKRQTVSGIAPNQAEDVVSTMLAKGFILGKDALNKAKAFDERHQLTSNASATVASIDRKMGITEKITAGTAVVNEKVREMDEMFQVSEKTKSALAVA

Query:  EQKASSAGTALMSNYYVLTGAAWFSNAVTAVTKAAEEVTQMTKAKVEKAEEEKKESIYRERTGIINNFAELHLDEPLPGEPAIVPVNSADR
        EQKASSAGTALMSNYYV TGAAWFSNAVTAVTKAAEEVTQMTKAKVEKAEEEKKESIYRERTGIINNFAELHLDEPLPGEPAIVPVNSADR
Subjt:  EQKASSAGTALMSNYYVLTGAAWFSNAVTAVTKAAEEVTQMTKAKVEKAEEEKKESIYRERTGIINNFAELHLDEPLPGEPAIVPVNSADR

XP_022941588.1 binding partner of ACD11 1-like isoform X3 [Cucurbita moschata]2.3e-13796.4Show/hide
Query:  LMMRTVKVSNISKATSERDIKEFFSFSGEILYVEMQRETENTQVAYVTYKDSQGADTAILLTGAKIGDLSVTITLVENYHLPPEAMSSILDKRQTVSGIA
        + MRTVKVSNISKATSERDI+EFFSFSGEILYVEMQRETENTQVAYVTYKDSQGADTAILLTGAKIGDLSVTI LVENYHLPPEAMSSILDKRQTV+G A
Subjt:  LMMRTVKVSNISKATSERDIKEFFSFSGEILYVEMQRETENTQVAYVTYKDSQGADTAILLTGAKIGDLSVTITLVENYHLPPEAMSSILDKRQTVSGIA

Query:  PNQAEDVVSTMLAKGFILGKDALNKAKAFDERHQLTSNASATVASIDRKMGITEKITAGTAVVNEKVREMDEMFQVSEKTKSALAVAEQKASSAGTALMS
        PNQAEDVVSTMLAKGFILGKDA+NKAKAFDERHQLTSNASATV SIDRKMGITEKITAGTAVVNEKVREMDE FQVSEKTKSALAVAEQKASSAGTALMS
Subjt:  PNQAEDVVSTMLAKGFILGKDALNKAKAFDERHQLTSNASATVASIDRKMGITEKITAGTAVVNEKVREMDEMFQVSEKTKSALAVAEQKASSAGTALMS

Query:  NYYVLTGAAWFSNAVTAVTKAAEEVTQMTKAKVEKAEEEKKESIYRERTGIINNFAELHLDEPLPGEPAIVPVNSADR
        NYYV TGAAWFSNAVTAVTKAAEEVTQMTKAKVEKAEEEKKESIYRERTGIINNFAELHLDEPLPGEPAIVPVNSADR
Subjt:  NYYVLTGAAWFSNAVTAVTKAAEEVTQMTKAKVEKAEEEKKESIYRERTGIINNFAELHLDEPLPGEPAIVPVNSADR

XP_038891484.1 binding partner of ACD11 1 [Benincasa hispida]1.4e-13796.76Show/hide
Query:  LMMRTVKVSNISKATSERDIKEFFSFSGEILYVEMQRETENTQVAYVTYKDSQGADTAILLTGAKIGDLSVTITLVENYHLPPEAMSSILDKRQTVSGIA
        + MRTVKVSNISK TSERDIKEFFSFSGEILYVEMQRETENTQVAYVTYKDSQGADTAILLTGAKIGDLSVTITLVENYHLPPEAMSSILDK+QTV GIA
Subjt:  LMMRTVKVSNISKATSERDIKEFFSFSGEILYVEMQRETENTQVAYVTYKDSQGADTAILLTGAKIGDLSVTITLVENYHLPPEAMSSILDKRQTVSGIA

Query:  PNQAEDVVSTMLAKGFILGKDALNKAKAFDERHQLTSNASATVASIDRKMGITEKITAGTAVVNEKVREMDEMFQVSEKTKSALAVAEQKASSAGTALMS
        PNQAEDVVSTMLAKGFILGKDALNKAKAFDER QLTSNASATVASIDRKMGITEKITAGTAVVNEKVREMDEMFQV+EKTKSALAVAEQKA+SAGTALMS
Subjt:  PNQAEDVVSTMLAKGFILGKDALNKAKAFDERHQLTSNASATVASIDRKMGITEKITAGTAVVNEKVREMDEMFQVSEKTKSALAVAEQKASSAGTALMS

Query:  NYYVLTGAAWFSNAVTAVTKAAEEVTQMTKAKVEKAEEEKKESIYRERTGIINNFAELHLDEPLPGEPAIVPVNSADR
        NYYVLTGAAWFSNAVTAVTKAAEEVTQMTK KVEKAEEEKKESIYRERTGIINNFAELHLDEPLPGEPAIVPVNSADR
Subjt:  NYYVLTGAAWFSNAVTAVTKAAEEVTQMTKAKVEKAEEEKKESIYRERTGIINNFAELHLDEPLPGEPAIVPVNSADR

TrEMBL top hitse value%identityAlignment
A0A0A0KIR7 RRM domain-containing protein3.3e-13796.4Show/hide
Query:  LMMRTVKVSNISKATSERDIKEFFSFSGEILYVEMQRETENTQVAYVTYKDSQGADTAILLTGAKIGDLSVTITLVENYHLPPEAMSSILDKRQTVSGIA
        + MRTVKVSNISK TSERDIKEFFSFSGEILYVEMQRE+ENTQVAYVTYKDSQGADTAILLTGAKIGDLSVTITLVENYHLPPEAMSSILDKRQTV+GIA
Subjt:  LMMRTVKVSNISKATSERDIKEFFSFSGEILYVEMQRETENTQVAYVTYKDSQGADTAILLTGAKIGDLSVTITLVENYHLPPEAMSSILDKRQTVSGIA

Query:  PNQAEDVVSTMLAKGFILGKDALNKAKAFDERHQLTSNASATVASIDRKMGITEKITAGTAVVNEKVREMDEMFQVSEKTKSALAVAEQKASSAGTALMS
        PNQAEDVVSTMLAKGFILGKDALNKAKAFDER QLTSNASATVASIDRKMGITEKITAGTAVVNEKVREMDEMFQV EKTKSALAVAEQKA+SAGTALMS
Subjt:  PNQAEDVVSTMLAKGFILGKDALNKAKAFDERHQLTSNASATVASIDRKMGITEKITAGTAVVNEKVREMDEMFQVSEKTKSALAVAEQKASSAGTALMS

Query:  NYYVLTGAAWFSNAVTAVTKAAEEVTQMTKAKVEKAEEEKKESIYRERTGIINNFAELHLDEPLPGEPAIVPVNSADR
        NYYVLTGAAWFSNAVTAVTKAAEEVTQMTK KVEKAEEEKKESIYRERTGII+NFAELHLDEPLPGEPAIVPVNSADR
Subjt:  NYYVLTGAAWFSNAVTAVTKAAEEVTQMTKAKVEKAEEEKKESIYRERTGIINNFAELHLDEPLPGEPAIVPVNSADR

A0A5A7UTK1 Binding partner of ACD11 1-like isoform X15.6e-13796.74Show/hide
Query:  MRTVKVSNISKATSERDIKEFFSFSGEILYVEMQRETENTQVAYVTYKDSQGADTAILLTGAKIGDLSVTITLVENYHLPPEAMSSILDKRQTVSGIAPN
        MRTVKVSNISK TSERDIKEFFSFSGEILYVEMQRE+ENTQVAYVTYKDSQGADTAILLTGAKIGDLSVTITLVENYHLPPEAMSSILDKRQTV+GIAPN
Subjt:  MRTVKVSNISKATSERDIKEFFSFSGEILYVEMQRETENTQVAYVTYKDSQGADTAILLTGAKIGDLSVTITLVENYHLPPEAMSSILDKRQTVSGIAPN

Query:  QAEDVVSTMLAKGFILGKDALNKAKAFDERHQLTSNASATVASIDRKMGITEKITAGTAVVNEKVREMDEMFQVSEKTKSALAVAEQKASSAGTALMSNY
        QAEDVVSTMLAKGFILGKDALNKAKAFDER Q TSNASATVASIDRKMGITEKITAGTAVVNEKVREMDEMFQV+EKTKSALAVAEQKA+SAGTALMSNY
Subjt:  QAEDVVSTMLAKGFILGKDALNKAKAFDERHQLTSNASATVASIDRKMGITEKITAGTAVVNEKVREMDEMFQVSEKTKSALAVAEQKASSAGTALMSNY

Query:  YVLTGAAWFSNAVTAVTKAAEEVTQMTKAKVEKAEEEKKESIYRERTGIINNFAELHLDEPLPGEPAIVPVNSADR
        YVLTGAAWFSNAVTAVTKAAEEVTQMTK KVEKAEEEKKESIYRERTGII+NFAELHLDEPLPGEPAIVPVNSADR
Subjt:  YVLTGAAWFSNAVTAVTKAAEEVTQMTKAKVEKAEEEKKESIYRERTGIINNFAELHLDEPLPGEPAIVPVNSADR

A0A6J1FLI4 binding partner of ACD11 1-like isoform X11.9e-13793.13Show/hide
Query:  RSAAFAFGY-LFSLMMRTVKVSNISKATSERDIKEFFSFSGEILYVEMQRETENTQVAYVTYKDSQGADTAILLTGAKIGDLSVTITLVENYHLPPEAMS
        RS  F   + ++   MRTVKVSNISKATSERDI+EFFSFSGEILYVEMQRETENTQVAYVTYKDSQGADTAILLTGAKIGDLSVTI LVENYHLPPEAMS
Subjt:  RSAAFAFGY-LFSLMMRTVKVSNISKATSERDIKEFFSFSGEILYVEMQRETENTQVAYVTYKDSQGADTAILLTGAKIGDLSVTITLVENYHLPPEAMS

Query:  SILDKRQTVSGIAPNQAEDVVSTMLAKGFILGKDALNKAKAFDERHQLTSNASATVASIDRKMGITEKITAGTAVVNEKVREMDEMFQVSEKTKSALAVA
        SILDKRQTV+G APNQAEDVVSTMLAKGFILGKDA+NKAKAFDERHQLTSNASATV SIDRKMGITEKITAGTAVVNEKVREMDE FQVSEKTKSALAVA
Subjt:  SILDKRQTVSGIAPNQAEDVVSTMLAKGFILGKDALNKAKAFDERHQLTSNASATVASIDRKMGITEKITAGTAVVNEKVREMDEMFQVSEKTKSALAVA

Query:  EQKASSAGTALMSNYYVLTGAAWFSNAVTAVTKAAEEVTQMTKAKVEKAEEEKKESIYRERTGIINNFAELHLDEPLPGEPAIVPVNSADR
        EQKASSAGTALMSNYYV TGAAWFSNAVTAVTKAAEEVTQMTKAKVEKAEEEKKESIYRERTGIINNFAELHLDEPLPGEPAIVPVNSADR
Subjt:  EQKASSAGTALMSNYYVLTGAAWFSNAVTAVTKAAEEVTQMTKAKVEKAEEEKKESIYRERTGIINNFAELHLDEPLPGEPAIVPVNSADR

A0A6J1FSI4 binding partner of ACD11 1-like isoform X31.1e-13796.4Show/hide
Query:  LMMRTVKVSNISKATSERDIKEFFSFSGEILYVEMQRETENTQVAYVTYKDSQGADTAILLTGAKIGDLSVTITLVENYHLPPEAMSSILDKRQTVSGIA
        + MRTVKVSNISKATSERDI+EFFSFSGEILYVEMQRETENTQVAYVTYKDSQGADTAILLTGAKIGDLSVTI LVENYHLPPEAMSSILDKRQTV+G A
Subjt:  LMMRTVKVSNISKATSERDIKEFFSFSGEILYVEMQRETENTQVAYVTYKDSQGADTAILLTGAKIGDLSVTITLVENYHLPPEAMSSILDKRQTVSGIA

Query:  PNQAEDVVSTMLAKGFILGKDALNKAKAFDERHQLTSNASATVASIDRKMGITEKITAGTAVVNEKVREMDEMFQVSEKTKSALAVAEQKASSAGTALMS
        PNQAEDVVSTMLAKGFILGKDA+NKAKAFDERHQLTSNASATV SIDRKMGITEKITAGTAVVNEKVREMDE FQVSEKTKSALAVAEQKASSAGTALMS
Subjt:  PNQAEDVVSTMLAKGFILGKDALNKAKAFDERHQLTSNASATVASIDRKMGITEKITAGTAVVNEKVREMDEMFQVSEKTKSALAVAEQKASSAGTALMS

Query:  NYYVLTGAAWFSNAVTAVTKAAEEVTQMTKAKVEKAEEEKKESIYRERTGIINNFAELHLDEPLPGEPAIVPVNSADR
        NYYV TGAAWFSNAVTAVTKAAEEVTQMTKAKVEKAEEEKKESIYRERTGIINNFAELHLDEPLPGEPAIVPVNSADR
Subjt:  NYYVLTGAAWFSNAVTAVTKAAEEVTQMTKAKVEKAEEEKKESIYRERTGIINNFAELHLDEPLPGEPAIVPVNSADR

A0A6J1K671 binding partner of ACD11 1-like isoform X25.6e-13796.04Show/hide
Query:  LMMRTVKVSNISKATSERDIKEFFSFSGEILYVEMQRETENTQVAYVTYKDSQGADTAILLTGAKIGDLSVTITLVENYHLPPEAMSSILDKRQTVSGIA
        + MRTVKVSNISKATSERDI+EFFSFSGEILYVEMQRETENTQVAYVTYKDSQGADTAILLTGAKIGDLSVTI LVENYHLPPEAMSSILDKRQTV+G A
Subjt:  LMMRTVKVSNISKATSERDIKEFFSFSGEILYVEMQRETENTQVAYVTYKDSQGADTAILLTGAKIGDLSVTITLVENYHLPPEAMSSILDKRQTVSGIA

Query:  PNQAEDVVSTMLAKGFILGKDALNKAKAFDERHQLTSNASATVASIDRKMGITEKITAGTAVVNEKVREMDEMFQVSEKTKSALAVAEQKASSAGTALMS
        PNQAEDVVSTMLAKGFILGKDA+NKAKAFDERHQLTSNASATV SIDRKMGI EKITAGTAVVNEKVREMDE FQVSEKTKSALAVAEQKASSAGTALMS
Subjt:  PNQAEDVVSTMLAKGFILGKDALNKAKAFDERHQLTSNASATVASIDRKMGITEKITAGTAVVNEKVREMDEMFQVSEKTKSALAVAEQKASSAGTALMS

Query:  NYYVLTGAAWFSNAVTAVTKAAEEVTQMTKAKVEKAEEEKKESIYRERTGIINNFAELHLDEPLPGEPAIVPVNSADR
        NYYV TGAAWFSNAVTAVTKAAEEVTQMTKAKVEKAEEEKKESIYRERTGIINNFAELHLDEPLPGEPAIVPVNSADR
Subjt:  NYYVLTGAAWFSNAVTAVTKAAEEVTQMTKAKVEKAEEEKKESIYRERTGIINNFAELHLDEPLPGEPAIVPVNSADR

SwissProt top hitse value%identityAlignment
P87216 Protein vip13.1e-0727.01Show/hide
Query:  MMRTVKVSNISKATSERDIKEFFSFSGEILYVEMQRETENTQVAYVTYKDSQGADTAILLTGAKIGDLSVTITLVENYHLPPEAMSSILDKRQTVSGIAP
        M   V V+NIS   +E+ I +FFSF G++  +  ++  E TQ A + ++      TA+LL  A +G   + IT  +         +S  D+       A 
Subjt:  MMRTVKVSNISKATSERDIKEFFSFSGEILYVEMQRETENTQVAYVTYKDSQGADTAILLTGAKIGDLSVTITLVENYHLPPEAMSSILDKRQTVSGIAP

Query:  NQAED----VVSTMLAKGFILGKDALNKAKAFDERHQLTSNASATVASIDRKMGITEKITAGTAVVN------EKVREMDEMFQVSEK---TKSALAVAE
         Q +     ++S +L++G+ L    L K+   D+ + ++S          +  GI E   +G   VN      EK  E+D  F +S+K   T S ++   
Subjt:  NQAED----VVSTMLAKGFILGKDALNKAKAFDERHQLTSNASATVASIDRKMGITEKITAGTAVVN------EKVREMDEMFQVSEK---TKSALAVAE

Query:  QKA--SSAGTA
         KA  ++AGT+
Subjt:  QKA--SSAGTA

Q9LFD5 Binding partner of ACD11 11.1e-5750Show/hide
Query:  MRTVKVSNISKATSERDIKEFFSFSGEILYVEMQRETENTQVAYVTYKDSQGADTAILLTGAKIGDLSVTITLVENYHLPPEAMSSILDKRQTVSGIAPN
        +R+VKV N+S   +E DIKEFFSFSGE+  +++Q    N   AYVT+K++QGA+TA+LL+GA I D SV I L  NY  PP A  +  + + + +     
Subjt:  MRTVKVSNISKATSERDIKEFFSFSGEILYVEMQRETENTQVAYVTYKDSQGADTAILLTGAKIGDLSVTITLVENYHLPPEAMSSILDKRQTVSGIAPN

Query:  QAEDVVSTMLAKGFILGKDALNKAKAFDERHQLTSNASATVASIDRKMGITEKITAGTAVVNEKVREMDEMFQVSEKTKSALAVAEQKASSAGTALMSNY
        +AEDVVS+MLAKGFILGKDA+ KAKAFDE+H  TS A+A VAS+D+K+G+++K+TAGT++VNEK++ +D+ FQV+E+TKS  A AEQ  SSAG+A+M N 
Subjt:  QAEDVVSTMLAKGFILGKDALNKAKAFDERHQLTSNASATVASIDRKMGITEKITAGTAVVNEKVREMDEMFQVSEKTKSALAVAEQKASSAGTALMSNY

Query:  YVLTGAAWFSNAVTAVTKAAEEVTQMTKAKVEKAEEEKKESIYRERTGIINNFAELHLDE
        YVLTG +W + A   V +AA EV Q TK   EK E E+     + +  +   ++ +H  E
Subjt:  YVLTGAAWFSNAVTAVTKAAEEVTQMTKAKVEKAEEEKKESIYRERTGIINNFAELHLDE

Arabidopsis top hitse value%identityAlignment
AT1G67950.1 RNA-binding (RRM/RBD/RNP motifs) family protein2.4e-7156.09Show/hide
Query:  MRTVKVSNISKATSERDIKEFFSFSGEILYVEMQRETENTQVAYVTYKDSQGADTAILLTGAKIGDLSVTITLVENYHLPPEAMSSILDKRQTVSGIAPN
        ++TVK+SN+S   S++D+KEFFSFSG+I YVEM+ ET+ +QVAYVT+KDSQGA+TA+LLTGA I DL V+IT   NY LPPEA++  LD   + +G +  
Subjt:  MRTVKVSNISKATSERDIKEFFSFSGEILYVEMQRETENTQVAYVTYKDSQGADTAILLTGAKIGDLSVTITLVENYHLPPEAMSSILDKRQTVSGIAPN

Query:  QAEDVVSTMLAKGFILGKDALNKAKAFDERHQLTSNASATVASIDRKMGITEKITAGTAVVNEKVREMDEMFQVSEKTKSALAVAEQKASSAGTALMSNY
        +AEDVV+ M+ +G+ LGKDA+ KAKAFD+RH L SNASAT+AS+D KMG++EK++ GT VVNEK+R++DE +QV E TKSALA AE+ A SA TALM+N 
Subjt:  QAEDVVSTMLAKGFILGKDALNKAKAFDERHQLTSNASATVASIDRKMGITEKITAGTAVVNEKVREMDEMFQVSEKTKSALAVAEQKASSAGTALMSNY

Query:  YVLTGAAWFSNAVTAVTKAAEEVTQMTKAKVEKAEEEKKESIYRERTGIINNFAELHLDEPLPGEPAIVPV
        YV +GA+WFSNA  AVTKA +E       KVE   E +KE I               LD   P  PA+VPV
Subjt:  YVLTGAAWFSNAVTAVTKAAEEVTQMTKAKVEKAEEEKKESIYRERTGIINNFAELHLDEPLPGEPAIVPV

AT1G67950.2 RNA-binding (RRM/RBD/RNP motifs) family protein2.4e-7156.09Show/hide
Query:  MRTVKVSNISKATSERDIKEFFSFSGEILYVEMQRETENTQVAYVTYKDSQGADTAILLTGAKIGDLSVTITLVENYHLPPEAMSSILDKRQTVSGIAPN
        ++TVK+SN+S   S++D+KEFFSFSG+I YVEM+ ET+ +QVAYVT+KDSQGA+TA+LLTGA I DL V+IT   NY LPPEA++  LD   + +G +  
Subjt:  MRTVKVSNISKATSERDIKEFFSFSGEILYVEMQRETENTQVAYVTYKDSQGADTAILLTGAKIGDLSVTITLVENYHLPPEAMSSILDKRQTVSGIAPN

Query:  QAEDVVSTMLAKGFILGKDALNKAKAFDERHQLTSNASATVASIDRKMGITEKITAGTAVVNEKVREMDEMFQVSEKTKSALAVAEQKASSAGTALMSNY
        +AEDVV+ M+ +G+ LGKDA+ KAKAFD+RH L SNASAT+AS+D KMG++EK++ GT VVNEK+R++DE +QV E TKSALA AE+ A SA TALM+N 
Subjt:  QAEDVVSTMLAKGFILGKDALNKAKAFDERHQLTSNASATVASIDRKMGITEKITAGTAVVNEKVREMDEMFQVSEKTKSALAVAEQKASSAGTALMSNY

Query:  YVLTGAAWFSNAVTAVTKAAEEVTQMTKAKVEKAEEEKKESIYRERTGIINNFAELHLDEPLPGEPAIVPV
        YV +GA+WFSNA  AVTKA +E       KVE   E +KE I               LD   P  PA+VPV
Subjt:  YVLTGAAWFSNAVTAVTKAAEEVTQMTKAKVEKAEEEKKESIYRERTGIINNFAELHLDEPLPGEPAIVPV

AT1G67950.3 RNA-binding (RRM/RBD/RNP motifs) family protein2.6e-7055.88Show/hide
Query:  MRTVKVSNISKATSERDIKEFFSFSGEILYVEMQRETENTQVAYVTYKDSQGADTAILLTGAKIGDLSVTITLVENYHLPPEAMSSILDKRQ-TVSGIAP
        ++TVK+SN+S   S++D+KEFFSFSG+I YVEM+ ET+ +QVAYVT+KDSQGA+TA+LLTGA I DL V+IT   NY LPPEA++  LD ++ + +G + 
Subjt:  MRTVKVSNISKATSERDIKEFFSFSGEILYVEMQRETENTQVAYVTYKDSQGADTAILLTGAKIGDLSVTITLVENYHLPPEAMSSILDKRQ-TVSGIAP

Query:  NQAEDVVSTMLAKGFILGKDALNKAKAFDERHQLTSNASATVASIDRKMGITEKITAGTAVVNEKVREMDEMFQVSEKTKSALAVAEQKASSAGTALMSN
         +AEDVV+ M+ +G+ LGKDA+ KAKAFD+RH L SNASAT+AS+D KMG++EK++ GT VVNEK+R++DE +QV E TKSALA AE+ A SA TALM+N
Subjt:  NQAEDVVSTMLAKGFILGKDALNKAKAFDERHQLTSNASATVASIDRKMGITEKITAGTAVVNEKVREMDEMFQVSEKTKSALAVAEQKASSAGTALMSN

Query:  YYVLTGAAWFSNAVTAVTKAAEEVTQMTKAKVEKAEEEKKESIYRERTGIINNFAELHLDEPLPGEPAIVPV
         YV +GA+WFSNA  AVTKA +E       KVE   E +KE I               LD   P  PA+VPV
Subjt:  YYVLTGAAWFSNAVTAVTKAAEEVTQMTKAKVEKAEEEKKESIYRERTGIINNFAELHLDEPLPGEPAIVPV

AT4G17720.1 RNA-binding (RRM/RBD/RNP motifs) family protein5.7e-7357.52Show/hide
Query:  LMMRTVKVSNISKATSERDIKEFFSFSGEILYVEMQRETENTQVAYVTYKDSQGADTAILLTGAKIGDLSVTITLVENYHLPPEAMSSILDKRQTVSGIA
        + M TVKVSN+S   ++RD+KEFFSFSG+ILY+E Q ETE T++AYVT+KD QGA+TA+LL+GA I D SV +++  +Y L PEA++S+  K    S  A
Subjt:  LMMRTVKVSNISKATSERDIKEFFSFSGEILYVEMQRETENTQVAYVTYKDSQGADTAILLTGAKIGDLSVTITLVENYHLPPEAMSSILDKRQTVSGIA

Query:  PN----QAEDVVSTMLAKGFILGKDALNKAKAFDERHQLTSNASATVASIDRKMGITEKITAGTAVVNEKVREMDEMFQVSEKTKSALAVAEQKASSAGT
         +    +AEDVVS+MLAKGFILGKDA+ KAK+ DE+HQLTS ASA VAS D+K+G T+KI  GT VV EKVRE+D+ +QVSEKTKSA+A AEQ  S+AG+
Subjt:  PN----QAEDVVSTMLAKGFILGKDALNKAKAFDERHQLTSNASATVASIDRKMGITEKITAGTAVVNEKVREMDEMFQVSEKTKSALAVAEQKASSAGT

Query:  ALMSNYYVLTGAAWFSNAVTAVTKAAEEVTQMTKAKVEKAEEEKKESIYRERTGIINNFAELHLDE
        A+M N YVLTGA W + A   V KAAEEV Q  K KV  AEEE K         +++ FA +HL E
Subjt:  ALMSNYYVLTGAAWFSNAVTAVTKAAEEVTQMTKAKVEKAEEEKKESIYRERTGIINNFAELHLDE

AT5G46870.1 RNA-binding (RRM/RBD/RNP motifs) family protein2.0e-7053.7Show/hide
Query:  LMMRTVKVSNISKATSERDIKEFFSFSGEILYVEMQRETENTQVAYVTYKDSQGADTAILLTGAKIGDLSVTITLVENYHLPPEAMSSILDKRQTVSGIA
        + M TVKVSN+S   +ERD+KEFFSFSG+I Y+E Q E + +++AYVT+KD QGA+TA+LLTG+ I D SVT+T+  +Y LPP+A++SI   +++    +
Subjt:  LMMRTVKVSNISKATSERDIKEFFSFSGEILYVEMQRETENTQVAYVTYKDSQGADTAILLTGAKIGDLSVTITLVENYHLPPEAMSSILDKRQTVSGIA

Query:  P--------NQAEDVVSTMLAKGFILGKDALNKAKAFDERHQLTSNASATVASIDRKMGITEKITAGTAVVNEKVREMDEMFQVSEKTKSALAVAEQKAS
        P         +AEDVVS M++KGF+LGKDA+ KAK+ DE+HQLTS ASA V S D+++G TEKI  GT VV+EKV+E+D+ FQV+EKTKSA+A AEQ  S
Subjt:  P--------NQAEDVVSTMLAKGFILGKDALNKAKAFDERHQLTSNASATVASIDRKMGITEKITAGTAVVNEKVREMDEMFQVSEKTKSALAVAEQKAS

Query:  SAGTALMSNYYVLTGAAWFSNAVTAVTKAAEEVTQMTKAKVEKAEEEKKESIYRERTGIINNFAELHLDE
        +AG+A+M N YVLTGA W + A   V+KAAEEV Q  K KV  AEEE++     E+  +++  A +HL E
Subjt:  SAGTALMSNYYVLTGAAWFSNAVTAVTKAAEEVTQMTKAKVEKAEEEKKESIYRERTGIINNFAELHLDE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAATTCCAATCCTTCAATAATAATATCATAGCATTGTGGAGATGTGTGGATGGTTCTCTTGTCCATAACAAGTGGTATCAGAGTCATGCCCCTGACGTAGCCATGTC
GAACAACAGAAACAACAACACTTCCCCTTCCCTTCTCTCTTCTCTTCTCTTCCTCCATTGCCGCCGCTCGATCTCCTCATCTTCCGCCGTCGCCGATTGCCTCTCCAAGC
TTTCCTCTGCCTTTCAGAAATGTCGATCTGCCGCGTTTGCGTTCGGTTATTTGTTTTCTCTTATGATGAGAACTGTGAAGGTCAGCAACATCTCAAAGGCTACTTCTGAG
AGAGACATCAAAGAATTCTTTTCATTCTCTGGTGAAATCCTTTATGTTGAAATGCAAAGAGAAACTGAAAATACTCAGGTTGCTTATGTTACATATAAGGATTCTCAAGG
AGCAGATACTGCCATACTTTTGACAGGAGCAAAAATTGGTGATCTATCTGTAACAATTACTCTGGTTGAGAATTATCATCTTCCACCTGAAGCAATGTCATCAATCCTGG
ATAAGAGGCAAACTGTTTCCGGGATTGCTCCGAATCAGGCTGAAGATGTCGTAAGTACAATGCTTGCCAAGGGCTTCATCTTAGGGAAGGATGCCCTCAACAAGGCAAAA
GCATTCGACGAACGACACCAGTTGACGTCGAATGCTTCTGCGACCGTCGCTTCCATTGACCGCAAGATGGGCATAACCGAGAAAATAACTGCAGGCACAGCAGTAGTAAA
TGAAAAGGTCAGGGAGATGGATGAAATGTTCCAGGTTTCTGAGAAGACGAAATCCGCCCTCGCAGTTGCCGAGCAGAAGGCAAGCAGTGCTGGAACCGCGCTCATGAGTA
ACTATTATGTGTTAACTGGAGCAGCATGGTTTTCAAATGCTGTAACTGCAGTTACAAAAGCTGCTGAGGAAGTGACCCAGATGACCAAGGCAAAAGTCGAGAAAGCCGAG
GAGGAGAAAAAGGAGAGCATATACCGTGAAAGAACCGGGATCATCAATAATTTCGCCGAGCTCCATCTCGACGAGCCTTTACCGGGAGAGCCTGCTATCGTTCCAGTTAA
TTCAGCCGATAGATAA
mRNA sequenceShow/hide mRNA sequence
ATGGAATTCCAATCCTTCAATAATAATATCATAGCATTGTGGAGATGTGTGGATGGTTCTCTTGTCCATAACAAGTGGTATCAGAGTCATGCCCCTGACGTAGCCATGTC
GAACAACAGAAACAACAACACTTCCCCTTCCCTTCTCTCTTCTCTTCTCTTCCTCCATTGCCGCCGCTCGATCTCCTCATCTTCCGCCGTCGCCGATTGCCTCTCCAAGC
TTTCCTCTGCCTTTCAGAAATGTCGATCTGCCGCGTTTGCGTTCGGTTATTTGTTTTCTCTTATGATGAGAACTGTGAAGGTCAGCAACATCTCAAAGGCTACTTCTGAG
AGAGACATCAAAGAATTCTTTTCATTCTCTGGTGAAATCCTTTATGTTGAAATGCAAAGAGAAACTGAAAATACTCAGGTTGCTTATGTTACATATAAGGATTCTCAAGG
AGCAGATACTGCCATACTTTTGACAGGAGCAAAAATTGGTGATCTATCTGTAACAATTACTCTGGTTGAGAATTATCATCTTCCACCTGAAGCAATGTCATCAATCCTGG
ATAAGAGGCAAACTGTTTCCGGGATTGCTCCGAATCAGGCTGAAGATGTCGTAAGTACAATGCTTGCCAAGGGCTTCATCTTAGGGAAGGATGCCCTCAACAAGGCAAAA
GCATTCGACGAACGACACCAGTTGACGTCGAATGCTTCTGCGACCGTCGCTTCCATTGACCGCAAGATGGGCATAACCGAGAAAATAACTGCAGGCACAGCAGTAGTAAA
TGAAAAGGTCAGGGAGATGGATGAAATGTTCCAGGTTTCTGAGAAGACGAAATCCGCCCTCGCAGTTGCCGAGCAGAAGGCAAGCAGTGCTGGAACCGCGCTCATGAGTA
ACTATTATGTGTTAACTGGAGCAGCATGGTTTTCAAATGCTGTAACTGCAGTTACAAAAGCTGCTGAGGAAGTGACCCAGATGACCAAGGCAAAAGTCGAGAAAGCCGAG
GAGGAGAAAAAGGAGAGCATATACCGTGAAAGAACCGGGATCATCAATAATTTCGCCGAGCTCCATCTCGACGAGCCTTTACCGGGAGAGCCTGCTATCGTTCCAGTTAA
TTCAGCCGATAGATAA
Protein sequenceShow/hide protein sequence
MEFQSFNNNIIALWRCVDGSLVHNKWYQSHAPDVAMSNNRNNNTSPSLLSSLLFLHCRRSISSSSAVADCLSKLSSAFQKCRSAAFAFGYLFSLMMRTVKVSNISKATSE
RDIKEFFSFSGEILYVEMQRETENTQVAYVTYKDSQGADTAILLTGAKIGDLSVTITLVENYHLPPEAMSSILDKRQTVSGIAPNQAEDVVSTMLAKGFILGKDALNKAK
AFDERHQLTSNASATVASIDRKMGITEKITAGTAVVNEKVREMDEMFQVSEKTKSALAVAEQKASSAGTALMSNYYVLTGAAWFSNAVTAVTKAAEEVTQMTKAKVEKAE
EEKKESIYRERTGIINNFAELHLDEPLPGEPAIVPVNSADR