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Spg028518 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg028518
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionS-protein homolog
Genome locationscaffold7:12635922..12636338
RNA-Seq ExpressionSpg028518
SyntenySpg028518
Gene Ontology termsNA
InterPro domainsIPR010264 - Plant self-incompatibility S1


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8648167.1 hypothetical protein Csa_018435 [Cucumis sativus]1.5e-3655.28Show/hide
Query:  VSGPTRSLAKVPNYRVEIHNELQMYILDSHCFSKDDDLGLHIVFPDQQHDWSFRINYWGTTLFHCRLEWQRGFREFDAFYVNDDFVRQYCPNFVCVWLAR
        +S P   +     + VEIHN+L+M+ILDSHC+SKDDDLGLHI+FPD++ DWSF+ N+  TT FHCRLEW+ G+ EFD+F    DFV  YC N  C+W AR
Subjt:  VSGPTRSLAKVPNYRVEIHNELQMYILDSHCFSKDDDLGLHIVFPDQQHDWSFRINYWGTTLFHCRLEWQRGFREFDAFYVNDDFVRQYCPNFVCVWLAR

Query:  QDGVYMKNSTGQVVLQHRWKMLR
        QDGVY+ N+ G+ V  + W+M+R
Subjt:  QDGVYMKNSTGQVVLQHRWKMLR

KAE8648168.1 hypothetical protein Csa_018354 [Cucumis sativus]2.3e-3765.66Show/hide
Query:  LDSHCFSKDDDLGLHIVFPDQQHDWSFRINYWGTTLFHCRLEWQRGFREFDAFYVNDDFVRQYCPNFVCVWLARQDGVYMKNSTGQVVLQHRWKMLRLP
        +D HC+SKD+DLGL I+ PD++  W FR N+ GTTLFHCRLEW+RGFREFDAF+V++DFV Q+CPNF+CVW+A+QDG+YM N  GQ+V  H WK+LR+P
Subjt:  LDSHCFSKDDDLGLHIVFPDQQHDWSFRINYWGTTLFHCRLEWQRGFREFDAFYVNDDFVRQYCPNFVCVWLARQDGVYMKNSTGQVVLQHRWKMLRLP

KAG6600849.1 S-protein-like 74, partial [Cucurbita argyrosperma subsp. sororia]4.2e-4768.33Show/hide
Query:  RSLAKVPNYRVEIHNELQMYILDSHCFSKDDDLGLHIVFPDQQHDWSFRINYWGTTLFHCRLEWQRGFREFDAFYVNDDFVRQYCPNFVCVWLARQDGVY
        RSL  +P + VEI N L+MYILDSHCFSKDDDLGLHI+FPD Q  WSFR N+WG TLFHCRLEW+RGF+EFDAF+V++ F  +YC NF C+W+A+QDG+Y
Subjt:  RSLAKVPNYRVEIHNELQMYILDSHCFSKDDDLGLHIVFPDQQHDWSFRINYWGTTLFHCRLEWQRGFREFDAFYVNDDFVRQYCPNFVCVWLARQDGVY

Query:  MKNSTGQVVLQHRWKMLRLP
        M N  GQ V  HRWK+LRLP
Subjt:  MKNSTGQVVLQHRWKMLRLP

KAG7031483.1 S-protein-like 1, partial [Cucurbita argyrosperma subsp. argyrosperma]1.3e-4861.84Show/hide
Query:  MHQLLLLFLGLLL-VSGPT-------------RSLAKVPNYRVEIHNELQMYILDSHCFSKDDDLGLHIVFPDQQHDWSFRINYWGTTLFHCRLEWQRGF
        M +L+LL+LGLLL +S PT             RSL  +P + VEI N L+MYILDSHCFSKDDDLGLHI+FPD Q  WSFR N+WG TLFHCRLEW+RGF
Subjt:  MHQLLLLFLGLLL-VSGPT-------------RSLAKVPNYRVEIHNELQMYILDSHCFSKDDDLGLHIVFPDQQHDWSFRINYWGTTLFHCRLEWQRGF

Query:  REFDAFYVNDDFVRQYCPNFVCVWLARQDGVYMKNSTGQVVLQHRWKMLRLP
        +EFDAF+V++ F  +YC NF C+W+A+QDG+YM N  GQ V  HRWK+LRLP
Subjt:  REFDAFYVNDDFVRQYCPNFVCVWLARQDGVYMKNSTGQVVLQHRWKMLRLP

XP_023546939.1 S-protein homolog 74-like [Cucurbita pepo subsp. pepo]1.4e-4770Show/hide
Query:  RSLAKVPNYRVEIHNELQMYILDSHCFSKDDDLGLHIVFPDQQHDWSFRINYWGTTLFHCRLEWQRGFREFDAFYVNDDFVRQYCPNFVCVWLARQDGVY
        RSL  +P +RVEI N LQMYILDSHCFSKDDDLGLHI+FPD Q  WSFR N WG TLFHCRLEW+RGF+EFDAF+V++ F  +YC NF C+W+A+QDG+Y
Subjt:  RSLAKVPNYRVEIHNELQMYILDSHCFSKDDDLGLHIVFPDQQHDWSFRINYWGTTLFHCRLEWQRGFREFDAFYVNDDFVRQYCPNFVCVWLARQDGVY

Query:  MKNSTGQVVLQHRWKMLRLP
        M N  GQ V  HRWK+LRLP
Subjt:  MKNSTGQVVLQHRWKMLRLP

TrEMBL top hitse value%identityAlignment
A0A0A0KL79 S-protein homolog7.2e-3755.28Show/hide
Query:  VSGPTRSLAKVPNYRVEIHNELQMYILDSHCFSKDDDLGLHIVFPDQQHDWSFRINYWGTTLFHCRLEWQRGFREFDAFYVNDDFVRQYCPNFVCVWLAR
        +S P   +     + VEIHN+L+M+ILDSHC+SKDDDLGLHI+FPD++ DWSF+ N+  TT FHCRLEW+ G+ EFD+F    DFV  YC N  C+W AR
Subjt:  VSGPTRSLAKVPNYRVEIHNELQMYILDSHCFSKDDDLGLHIVFPDQQHDWSFRINYWGTTLFHCRLEWQRGFREFDAFYVNDDFVRQYCPNFVCVWLAR

Query:  QDGVYMKNSTGQVVLQHRWKMLR
        QDGVY+ N+ G+ V  + W+M+R
Subjt:  QDGVYMKNSTGQVVLQHRWKMLR

A0A0A0KSN2 S-protein homolog1.8e-3247.89Show/hide
Query:  LLLLFLGLLLV----------SGPTRSLAKVPNYRVEIHNELQMYILDSHCFSKDDDLGLHIVFPDQQHDWSFRINYWGTTLFHCRLEWQRGFREFDAFY
        +LL+FL L+++          +    S+ ++ +Y++EIHN+L+MY+LDSHCFSKD+DLGLHI+FP +  DWSF+ N + TT F C LEW+ G  EFD+F 
Subjt:  LLLLFLGLLLV----------SGPTRSLAKVPNYRVEIHNELQMYILDSHCFSKDDDLGLHIVFPDQQHDWSFRINYWGTTLFHCRLEWQRGFREFDAFY

Query:  VNDDFVRQYCPNFVCVWLARQDGVYMKNSTGQVVLQHRWKML
         N +F+  +C N  C W ARQDGVY+ N  G+ V Q  W ML
Subjt:  VNDDFVRQYCPNFVCVWLARQDGVYMKNSTGQVVLQHRWKML

A0A1S3BUQ9 S-protein homolog1.8e-3250.83Show/hide
Query:  PTRSLAKVPNYRVEIHNELQMYILDSHCFSKDDDLGLHIVFPDQQHDWSFRINYWGTTLFHCRLEWQRGFREFDAFYVNDDFVRQYCPNFVCVWLARQDG
        P   L     + + I+NELQMY+LDSHC+SKDDDLG  +++P+ +  WSFR N+ GTT FHC+LEW+ G+ EFDAF  +  F+  +C    C W ARQDG
Subjt:  PTRSLAKVPNYRVEIHNELQMYILDSHCFSKDDDLGLHIVFPDQQHDWSFRINYWGTTLFHCRLEWQRGFREFDAFYVNDDFVRQYCPNFVCVWLARQDG

Query:  VYMKNSTGQVVLQHRWKMLR
        VY+ N  GQVV    W+M+R
Subjt:  VYMKNSTGQVVLQHRWKMLR

A0A1S3BVC0 S-protein homolog2.2e-3056.31Show/hide
Query:  SLAKVPNYRVEIHNELQMYILDSHCFSKDDDLGLHIVFPDQQHDWSFRINYWGTTLFHCRLEWQRGFREFDAFYVNDDFVRQYCPNFVCVWLARQDGVYM
        S+ ++ +Y+V+IHN+L+MY+LDSHCFSKD+DLGLHI+FP +Q DWSF  N + TT F CRLEW+ G  EFD+F  + DF+  +C N  C W A+QDGVY+
Subjt:  SLAKVPNYRVEIHNELQMYILDSHCFSKDDDLGLHIVFPDQQHDWSFRINYWGTTLFHCRLEWQRGFREFDAFYVNDDFVRQYCPNFVCVWLARQDGVYM

Query:  KNS
         N+
Subjt:  KNS

A0A6J1F5H5 S-protein homolog1.7e-3360Show/hide
Query:  YRVEIHNELQMYILDSHCFSKDDDLGLHIVFPDQQHDWSFRINYWGTTLFHCRLEWQRGFREFDAFYVN-DDFVRQYCPNFVCVWLARQDGVYMKNSTGQ
        + VEIHN+L+M+ILD+HC SKDDDLGLHI+FPD++ DWSF  N+ GTT FHCRLEWQ G  EFDAF+ N D+ +  YC N  C+W ARQDGVY+ N    
Subjt:  YRVEIHNELQMYILDSHCFSKDDDLGLHIVFPDQQHDWSFRINYWGTTLFHCRLEWQRGFREFDAFYVN-DDFVRQYCPNFVCVWLARQDGVYMKNSTGQ

Query:  VVLQHRWKML
        +V    W ML
Subjt:  VVLQHRWKML

SwissProt top hitse value%identityAlignment
F2Q9V4 S-protein homolog 61.4e-0836.08Show/hide
Query:  KVPNYRVEIHNELQMYILDSHCFSKDDDLGLHIVFPDQQHDWSFRINYWGTTLFHCRLEWQRGFR-EFDAFYVNDDFVRQYCPNFVCVWLARQDGVY
        K P  RV I+N+   Y+L  HC S+DDD G HI+     + W F +N+  +TL+ C    ++  +  FD +    D  R  C N  C W A++DG+Y
Subjt:  KVPNYRVEIHNELQMYILDSHCFSKDDDLGLHIVFPDQQHDWSFRINYWGTTLFHCRLEWQRGFR-EFDAFYVNDDFVRQYCPNFVCVWLARQDGVY

O23020 S-protein homolog 56.1e-0937.66Show/hide
Query:  LDSHCFSKDDDLGLHIVFPDQQHDWSFRINYWGTTLFHCRLEWQRGFREFDAFYVNDDFVRQYCPNFVCVWLARQDG
        L  HC SK DDLG+H+V   Q++ + F+ N W +TLF C  +W   F+ FD +    D  +  C +  C W  + DG
Subjt:  LDSHCFSKDDDLGLHIVFPDQQHDWSFRINYWGTTLFHCRLEWQRGFREFDAFYVNDDFVRQYCPNFVCVWLARQDG

P0DN92 S-protein homolog 241.9e-1039.13Show/hide
Query:  RVEIHNELQMYILDSHCFSKDDDLGLHIVFPDQQHDWSFRINYWGTTLFHCRL-EWQRGFREFDAFYVNDDFVRQYCPNFVCVWLARQDGVY
        RV I N+   Y+L  HC S+DDDLG HI+   +   W F +N+  +TL+ C   + Q     F+ +  N DF R  C N  C W A +DG+Y
Subjt:  RVEIHNELQMYILDSHCFSKDDDLGLHIVFPDQQHDWSFRINYWGTTLFHCRL-EWQRGFREFDAFYVNDDFVRQYCPNFVCVWLARQDGVY

Q3E9W6 S-protein homolog 201.6e-0940.66Show/hide
Query:  VEIHNELQMYI-LDSHCFSKDDDLGLHIVFPDQQHDWSFR--INYWGTTLFHCRLEWQRGFREFDAFYVNDDFVRQYCPNFVCVWLARQDG
        V+I N++   + L  HC SKD DLG   + P QQH W FR  +++WG TLF C  EW+   + FD      D  R  C    CVW  R  G
Subjt:  VEIHNELQMYI-LDSHCFSKDDDLGLHIVFPDQQHDWSFR--INYWGTTLFHCRLEWQRGFREFDAFYVNDDFVRQYCPNFVCVWLARQDG

Q9FI84 S-protein homolog 272.1e-0935.58Show/hide
Query:  PNYRVEIHNELQMYILDSHCFSKDDDLGLHIVFPDQQHDWSFRINYWGTTLFHCRL-EWQRGFREFDAFYVNDDFVRQYCPNFVCVWLARQDGVYMKNST
        P  R+ + N    Y+L  HC SKDDDLG HI    + + W F +N+  +TL+ C   + Q     FD      DF R  C N  C W A++D +Y  ++ 
Subjt:  PNYRVEIHNELQMYILDSHCFSKDDDLGLHIVFPDQQHDWSFRINYWGTTLFHCRL-EWQRGFREFDAFYVNDDFVRQYCPNFVCVWLARQDGVYMKNST

Query:  GQVV
         Q V
Subjt:  GQVV

Arabidopsis top hitse value%identityAlignment
AT1G04645.1 Plant self-incompatibility protein S1 family4.3e-1037.66Show/hide
Query:  LDSHCFSKDDDLGLHIVFPDQQHDWSFRINYWGTTLFHCRLEWQRGFREFDAFYVNDDFVRQYCPNFVCVWLARQDG
        L  HC SK DDLG+H+V   Q++ + F+ N W +TLF C  +W   F+ FD +    D  +  C +  C W  + DG
Subjt:  LDSHCFSKDDDLGLHIVFPDQQHDWSFRINYWGTTLFHCRLEWQRGFREFDAFYVNDDFVRQYCPNFVCVWLARQDG

AT3G27331.1 Plant self-incompatibility protein S1 family5.6e-1035.24Show/hide
Query:  VEIHNELQ-MYILDSHCFSKDDDLGLHIVFPDQQHDWSFRINYWGTTLFHCRLEWQRGFREFDAFYVNDDFVRQYCPNFVCVWLARQDGVYMKNSTGQVV
        + I NEL+   +L   C+SKDD LG  I+   Q ++  F IN+W TT F C L     FR +  F     F        +  W AR++G+Y+K   G+ V
Subjt:  VEIHNELQ-MYILDSHCFSKDDDLGLHIVFPDQQHDWSFRINYWGTTLFHCRLEWQRGFREFDAFYVNDDFVRQYCPNFVCVWLARQDGVYMKNSTGQVV

Query:  LQHRW
        L   W
Subjt:  LQHRW

AT4G24975.1 Plant self-incompatibility protein S1 family1.1e-1040.66Show/hide
Query:  VEIHNELQMYI-LDSHCFSKDDDLGLHIVFPDQQHDWSFR--INYWGTTLFHCRLEWQRGFREFDAFYVNDDFVRQYCPNFVCVWLARQDG
        V+I N++   + L  HC SKD DLG   + P QQH W FR  +++WG TLF C  EW+   + FD      D  R  C    CVW  R  G
Subjt:  VEIHNELQMYI-LDSHCFSKDDDLGLHIVFPDQQHDWSFR--INYWGTTLFHCRLEWQRGFREFDAFYVNDDFVRQYCPNFVCVWLARQDG

AT5G04350.1 Plant self-incompatibility protein S1 family3.3e-1029.41Show/hide
Query:  MHQLLLLFLGLLLVSGPTRSLAKVPNYRVEIHNELQ-MYILDSHCFSKDDDLGLHIVFPDQQHDWSFRINYWGTTLFHCRLEWQRGFREFDAFYVNDDFV
        M+ L +  + + L  G + +  ++   +V + N+L+   +L  HC SKDDDLG HI+   Q ++++F  N W TT F C+++    F+    F   +   
Subjt:  MHQLLLLFLGLLLVSGPTRSLAKVPNYRVEIHNELQ-MYILDSHCFSKDDDLGLHIVFPDQQHDWSFRINYWGTTLFHCRLEWQRGFREFDAFYVNDDFV

Query:  RQYCPNFVCVWLARQDGVY
         +      C W+ R+DG+Y
Subjt:  RQYCPNFVCVWLARQDGVY

AT5G06020.1 Plant self-incompatibility protein S1 family1.5e-1035.58Show/hide
Query:  PNYRVEIHNELQMYILDSHCFSKDDDLGLHIVFPDQQHDWSFRINYWGTTLFHCRL-EWQRGFREFDAFYVNDDFVRQYCPNFVCVWLARQDGVYMKNST
        P  R+ + N    Y+L  HC SKDDDLG HI    + + W F +N+  +TL+ C   + Q     FD      DF R  C N  C W A++D +Y  ++ 
Subjt:  PNYRVEIHNELQMYILDSHCFSKDDDLGLHIVFPDQQHDWSFRINYWGTTLFHCRL-EWQRGFREFDAFYVNDDFVRQYCPNFVCVWLARQDGVYMKNST

Query:  GQVV
         Q V
Subjt:  GQVV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCATCAACTCCTATTATTATTTCTAGGGCTCTTGCTCGTCAGTGGACCAACCCGATCTCTCGCTAAGGTTCCTAATTATCGCGTAGAAATCCACAATGAATTGCAAAT
GTACATATTGGATAGCCATTGCTTCTCAAAGGACGACGATTTGGGATTGCACATAGTTTTTCCCGACCAGCAACACGATTGGTCTTTCCGAATCAATTATTGGGGAACGA
CCTTATTCCATTGCAGATTGGAATGGCAAAGAGGGTTCCGGGAGTTTGATGCATTTTATGTTAATGACGATTTTGTTCGTCAATATTGTCCCAACTTTGTGTGTGTTTGG
TTGGCCAGACAAGATGGGGTTTACATGAAGAATTCAACTGGTCAGGTTGTTCTTCAGCATCGTTGGAAAATGCTCCGATTGCCATAA
mRNA sequenceShow/hide mRNA sequence
ATGCATCAACTCCTATTATTATTTCTAGGGCTCTTGCTCGTCAGTGGACCAACCCGATCTCTCGCTAAGGTTCCTAATTATCGCGTAGAAATCCACAATGAATTGCAAAT
GTACATATTGGATAGCCATTGCTTCTCAAAGGACGACGATTTGGGATTGCACATAGTTTTTCCCGACCAGCAACACGATTGGTCTTTCCGAATCAATTATTGGGGAACGA
CCTTATTCCATTGCAGATTGGAATGGCAAAGAGGGTTCCGGGAGTTTGATGCATTTTATGTTAATGACGATTTTGTTCGTCAATATTGTCCCAACTTTGTGTGTGTTTGG
TTGGCCAGACAAGATGGGGTTTACATGAAGAATTCAACTGGTCAGGTTGTTCTTCAGCATCGTTGGAAAATGCTCCGATTGCCATAA
Protein sequenceShow/hide protein sequence
MHQLLLLFLGLLLVSGPTRSLAKVPNYRVEIHNELQMYILDSHCFSKDDDLGLHIVFPDQQHDWSFRINYWGTTLFHCRLEWQRGFREFDAFYVNDDFVRQYCPNFVCVW
LARQDGVYMKNSTGQVVLQHRWKMLRLP