CuGenDBv2

Gene ID	Spg028521
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	Gag protease polyprotein
Genome location	scaffold7:11947226..11949632
RNA-Seq Expression	Spg028521
Synteny	Spg028521
Gene Ontology terms	GO:0006259 - DNA metabolic process (biological process) GO:0003676 - nucleic acid binding (molecular function) GO:0016787 - hydrolase activity (molecular function) GO:0140640 - catalytic activity, acting on a nucleic acid (molecular function)
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

KAA0031753.1 gag protease polyprotein [Cucumis melo var. makuwa]

1.6e-38

54.6

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Query:  KGKAKVADTLDITVEEIDDSEQAKENIDHRTSAFDRIGPSVTRSSVFQRLSTAAIEDESQHPTYGSTRPSAFQRLSMASEEKENVHSTPTTRLSAFQRLS
        KGKAKVA+T  ITVEE  DSE+ K++   R+S FDRI  S  R SVFQR+ST+  +D +Q  T  STR SAFQRL+ ++++  ++  TPTTR SAF+RLS
Subjt:  KGKAKVADTLDITVEEIDDSEQAKENIDHRTSAFDRIGPSVTRSSVFQRLSTAAIEDESQHPTYGSTRPSAFQRLSMASEEKENVHSTPTTRLSAFQRLS

Query:  VATKRSKERSPISVSNITETPIKTKGDEKIRSVVPSRMKRKLLVSVNTEGSLKIKRHDIIITRPKEKSPDDEKD
        V+  R ++++ +SVSN +       GDE+IRS  PSRMKRK+ VSVNTEGSLK+KRHD++ TRP++  P+DE D
Subjt:  VATKRSKERSPISVSNITETPIKTKGDEKIRSVVPSRMKRKLLVSVNTEGSLKIKRHDIIITRPKEKSPDDEKD

KAA0047477.1 uncharacterized protein E6C27_scaffold498G00940 [Cucumis melo var. makuwa]

1.6e-38

48.78

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Query:  KGKAKVADTLDITVEEIDDSEQAKENIDHRTSAFDRIGPSVTRSSVFQRLSTAAIEDESQHPTYGSTRPSAFQRLSMASEEKENVHSTPTTRLSAFQRLS
        KGKAKVA+T  ITVEE  DSE+ K+    R+S FDRI  S  R SVFQR+ST+  +D +Q  T  STR SAFQRL+ ++++  ++  TPTTR SAF+RLS
Subjt:  KGKAKVADTLDITVEEIDDSEQAKENIDHRTSAFDRIGPSVTRSSVFQRLSTAAIEDESQHPTYGSTRPSAFQRLSMASEEKENVHSTPTTRLSAFQRLS

Query:  VATKRSKERSPISVSNITETPIKTKGDEKIRSVVPSRMKRKLLVSVNTEGSLKIKRHDIIITRPKEKSPDDEKDTVSYRRQVLRGTLNIGDLFTDFGNLE
        V+  R ++++ +SVSN +       GDE+IRS  PSRMKRK+ VSVNTEGSLK+KRHD++ TRP++  P+DE D        +  T +  D+F +     
Subjt:  VATKRSKERSPISVSNITETPIKTKGDEKIRSVVPSRMKRKLLVSVNTEGSLKIKRHDIIITRPKEKSPDDEKDTVSYRRQVLRGTLNIGDLFTDFGNLE

Query:  SLLLQ
         L L+
Subjt:  SLLLQ

TYJ98225.1 uncharacterized protein E5676_scaffold180G001270 [Cucumis melo var. makuwa]

1.6e-38

48.78

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Query:  KGKAKVADTLDITVEEIDDSEQAKENIDHRTSAFDRIGPSVTRSSVFQRLSTAAIEDESQHPTYGSTRPSAFQRLSMASEEKENVHSTPTTRLSAFQRLS
        KGKAKVA+T  ITVEE  DSE+ K+    R+S FDRI  S  R SVFQR+ST+  +D +Q  T  STR SAFQRL+ ++++  ++  TPTTR SAF+RLS
Subjt:  KGKAKVADTLDITVEEIDDSEQAKENIDHRTSAFDRIGPSVTRSSVFQRLSTAAIEDESQHPTYGSTRPSAFQRLSMASEEKENVHSTPTTRLSAFQRLS

Query:  VATKRSKERSPISVSNITETPIKTKGDEKIRSVVPSRMKRKLLVSVNTEGSLKIKRHDIIITRPKEKSPDDEKDTVSYRRQVLRGTLNIGDLFTDFGNLE
        V+  R ++++ +SVSN +       GDE+IRS  PSRMKRK+ VSVNTEGSLK+KRHD++ TRP++  P+DE D        +  T +  D+F +     
Subjt:  VATKRSKERSPISVSNITETPIKTKGDEKIRSVVPSRMKRKLLVSVNTEGSLKIKRHDIIITRPKEKSPDDEKDTVSYRRQVLRGTLNIGDLFTDFGNLE

Query:  SLLLQ
         L L+
Subjt:  SLLLQ

TYK06199.1 uncharacterized protein E5676_scaffold287G00570 [Cucumis melo var. makuwa]

1.6e-38

48.29

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Query:  KGKAKVADTLDITVEEIDDSEQAKENIDHRTSAFDRIGPSVTRSSVFQRLSTAAIEDESQHPTYGSTRPSAFQRLSMASEEKENVHSTPTTRLSAFQRLS
        KGK KVA+T  ITVEE  DSE+ K++   R+S FDRI  S  R SVFQR+ST+  +D +Q  T  STR SAFQRL+ ++++  ++  TPTTR SAF+RLS
Subjt:  KGKAKVADTLDITVEEIDDSEQAKENIDHRTSAFDRIGPSVTRSSVFQRLSTAAIEDESQHPTYGSTRPSAFQRLSMASEEKENVHSTPTTRLSAFQRLS

Query:  VATKRSKERSPISVSNITETPIKTKGDEKIRSVVPSRMKRKLLVSVNTEGSLKIKRHDIIITRPKEKSPDDEKDTVSYRRQVLRGTLNIGDLFTDFGNLE
        V+  R ++++ +SVSN +       GDE+IRS  PSRMKRK+ VSVNTEGSLK+KRHD++ TRP++  P+DE D        +  T +  D+F +     
Subjt:  VATKRSKERSPISVSNITETPIKTKGDEKIRSVVPSRMKRKLLVSVNTEGSLKIKRHDIIITRPKEKSPDDEKDTVSYRRQVLRGTLNIGDLFTDFGNLE

Query:  SLLLQ
         L L+
Subjt:  SLLLQ

TYK18071.1 uncharacterized protein E5676_scaffold306G004020 [Cucumis melo var. makuwa]

1.6e-38

48.78

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Query:  KGKAKVADTLDITVEEIDDSEQAKENIDHRTSAFDRIGPSVTRSSVFQRLSTAAIEDESQHPTYGSTRPSAFQRLSMASEEKENVHSTPTTRLSAFQRLS
        KGKAKVA+T  ITVEE  DSE+ K+    R+S FDRI  S  R SVFQR+ST+  +D +Q  T  STR SAFQRL+ ++++  ++  TPTTR SAF+RLS
Subjt:  KGKAKVADTLDITVEEIDDSEQAKENIDHRTSAFDRIGPSVTRSSVFQRLSTAAIEDESQHPTYGSTRPSAFQRLSMASEEKENVHSTPTTRLSAFQRLS

Query:  VATKRSKERSPISVSNITETPIKTKGDEKIRSVVPSRMKRKLLVSVNTEGSLKIKRHDIIITRPKEKSPDDEKDTVSYRRQVLRGTLNIGDLFTDFGNLE
        V+  R ++++ +SVSN +       GDE+IRS  PSRMKRK+ VSVNTEGSLK+KRHD++ TRP++  P+DE D        +  T +  D+F +     
Subjt:  VATKRSKERSPISVSNITETPIKTKGDEKIRSVVPSRMKRKLLVSVNTEGSLKIKRHDIIITRPKEKSPDDEKDTVSYRRQVLRGTLNIGDLFTDFGNLE

Query:  SLLLQ
         L L+
Subjt:  SLLLQ

TrEMBL top hits

e value

%identity

Alignment

A0A5A7SND9 Gag protease polyprotein

7.7e-39

54.6

Show/hide

Query:  KGKAKVADTLDITVEEIDDSEQAKENIDHRTSAFDRIGPSVTRSSVFQRLSTAAIEDESQHPTYGSTRPSAFQRLSMASEEKENVHSTPTTRLSAFQRLS
        KGKAKVA+T  ITVEE  DSE+ K++   R+S FDRI  S  R SVFQR+ST+  +D +Q  T  STR SAFQRL+ ++++  ++  TPTTR SAF+RLS
Subjt:  KGKAKVADTLDITVEEIDDSEQAKENIDHRTSAFDRIGPSVTRSSVFQRLSTAAIEDESQHPTYGSTRPSAFQRLSMASEEKENVHSTPTTRLSAFQRLS

Query:  VATKRSKERSPISVSNITETPIKTKGDEKIRSVVPSRMKRKLLVSVNTEGSLKIKRHDIIITRPKEKSPDDEKD
        V+  R ++++ +SVSN +       GDE+IRS  PSRMKRK+ VSVNTEGSLK+KRHD++ TRP++  P+DE D
Subjt:  VATKRSKERSPISVSNITETPIKTKGDEKIRSVVPSRMKRKLLVSVNTEGSLKIKRHDIIITRPKEKSPDDEKD

A0A5A7TZU9 Ribonuclease H

7.7e-39

48.78

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Query:  KGKAKVADTLDITVEEIDDSEQAKENIDHRTSAFDRIGPSVTRSSVFQRLSTAAIEDESQHPTYGSTRPSAFQRLSMASEEKENVHSTPTTRLSAFQRLS
        KGKAKVA+T  ITVEE  DSE+ K+    R+S FDRI  S  R SVFQR+ST+  +D +Q  T  STR SAFQRL+ ++++  ++  TPTTR SAF+RLS
Subjt:  KGKAKVADTLDITVEEIDDSEQAKENIDHRTSAFDRIGPSVTRSSVFQRLSTAAIEDESQHPTYGSTRPSAFQRLSMASEEKENVHSTPTTRLSAFQRLS

Query:  VATKRSKERSPISVSNITETPIKTKGDEKIRSVVPSRMKRKLLVSVNTEGSLKIKRHDIIITRPKEKSPDDEKDTVSYRRQVLRGTLNIGDLFTDFGNLE
        V+  R ++++ +SVSN +       GDE+IRS  PSRMKRK+ VSVNTEGSLK+KRHD++ TRP++  P+DE D        +  T +  D+F +     
Subjt:  VATKRSKERSPISVSNITETPIKTKGDEKIRSVVPSRMKRKLLVSVNTEGSLKIKRHDIIITRPKEKSPDDEKDTVSYRRQVLRGTLNIGDLFTDFGNLE

Query:  SLLLQ
         L L+
Subjt:  SLLLQ

A0A5D3BIH8 Uncharacterized protein

7.7e-39

48.78

Show/hide

Query:  KGKAKVADTLDITVEEIDDSEQAKENIDHRTSAFDRIGPSVTRSSVFQRLSTAAIEDESQHPTYGSTRPSAFQRLSMASEEKENVHSTPTTRLSAFQRLS
        KGKAKVA+T  ITVEE  DSE+ K+    R+S FDRI  S  R SVFQR+ST+  +D +Q  T  STR SAFQRL+ ++++  ++  TPTTR SAF+RLS
Subjt:  KGKAKVADTLDITVEEIDDSEQAKENIDHRTSAFDRIGPSVTRSSVFQRLSTAAIEDESQHPTYGSTRPSAFQRLSMASEEKENVHSTPTTRLSAFQRLS

Query:  VATKRSKERSPISVSNITETPIKTKGDEKIRSVVPSRMKRKLLVSVNTEGSLKIKRHDIIITRPKEKSPDDEKDTVSYRRQVLRGTLNIGDLFTDFGNLE
        V+  R ++++ +SVSN +       GDE+IRS  PSRMKRK+ VSVNTEGSLK+KRHD++ TRP++  P+DE D        +  T +  D+F +     
Subjt:  VATKRSKERSPISVSNITETPIKTKGDEKIRSVVPSRMKRKLLVSVNTEGSLKIKRHDIIITRPKEKSPDDEKDTVSYRRQVLRGTLNIGDLFTDFGNLE

Query:  SLLLQ
         L L+
Subjt:  SLLLQ

A0A5D3C783 Ribonuclease H

7.7e-39

48.29

Show/hide

Query:  KGKAKVADTLDITVEEIDDSEQAKENIDHRTSAFDRIGPSVTRSSVFQRLSTAAIEDESQHPTYGSTRPSAFQRLSMASEEKENVHSTPTTRLSAFQRLS
        KGK KVA+T  ITVEE  DSE+ K++   R+S FDRI  S  R SVFQR+ST+  +D +Q  T  STR SAFQRL+ ++++  ++  TPTTR SAF+RLS
Subjt:  KGKAKVADTLDITVEEIDDSEQAKENIDHRTSAFDRIGPSVTRSSVFQRLSTAAIEDESQHPTYGSTRPSAFQRLSMASEEKENVHSTPTTRLSAFQRLS

Query:  VATKRSKERSPISVSNITETPIKTKGDEKIRSVVPSRMKRKLLVSVNTEGSLKIKRHDIIITRPKEKSPDDEKDTVSYRRQVLRGTLNIGDLFTDFGNLE
        V+  R ++++ +SVSN +       GDE+IRS  PSRMKRK+ VSVNTEGSLK+KRHD++ TRP++  P+DE D        +  T +  D+F +     
Subjt:  VATKRSKERSPISVSNITETPIKTKGDEKIRSVVPSRMKRKLLVSVNTEGSLKIKRHDIIITRPKEKSPDDEKDTVSYRRQVLRGTLNIGDLFTDFGNLE

Query:  SLLLQ
         L L+
Subjt:  SLLLQ

A0A5D3D1E5 Ribonuclease H

7.7e-39

48.78

Show/hide

Query:  KGKAKVADTLDITVEEIDDSEQAKENIDHRTSAFDRIGPSVTRSSVFQRLSTAAIEDESQHPTYGSTRPSAFQRLSMASEEKENVHSTPTTRLSAFQRLS
        KGKAKVA+T  ITVEE  DSE+ K+    R+S FDRI  S  R SVFQR+ST+  +D +Q  T  STR SAFQRL+ ++++  ++  TPTTR SAF+RLS
Subjt:  KGKAKVADTLDITVEEIDDSEQAKENIDHRTSAFDRIGPSVTRSSVFQRLSTAAIEDESQHPTYGSTRPSAFQRLSMASEEKENVHSTPTTRLSAFQRLS

Query:  VATKRSKERSPISVSNITETPIKTKGDEKIRSVVPSRMKRKLLVSVNTEGSLKIKRHDIIITRPKEKSPDDEKDTVSYRRQVLRGTLNIGDLFTDFGNLE
        V+  R ++++ +SVSN +       GDE+IRS  PSRMKRK+ VSVNTEGSLK+KRHD++ TRP++  P+DE D        +  T +  D+F +     
Subjt:  VATKRSKERSPISVSNITETPIKTKGDEKIRSVVPSRMKRKLLVSVNTEGSLKIKRHDIIITRPKEKSPDDEKDTVSYRRQVLRGTLNIGDLFTDFGNLE

Query:  SLLLQ
         L L+
Subjt:  SLLLQ

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits	e value	%identity	Alignment
No hits found

Sequences

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CDS sequence

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ATGAGAAGAAAAGGGAAAGCGAAAGTTGCAGATACGCTTGACATTACAGTGGAAGAAATCGATGATTCCGAACAGGCTAAAGAAAACATAGATCATAGGACTTCTGCATT
TGATCGCATTGGACCGTCGGTTACACGATCCTCGGTTTTTCAAAGACTGAGTACAGCTGCAATAGAAGATGAAAGTCAACATCCAACTTATGGCTCCACACGACCTTCAG
CTTTCCAAAGATTAAGTATGGCTTCTGAAGAAAAAGAAAATGTGCATTCAACTCCTACCACACGGCTATCAGCTTTCCAAAGGTTGAGTGTAGCCACAAAAAGAAGTAAA
GAACGGTCCCCTATATCAGTTTCTAACATAACAGAAACTCCAATCAAGACAAAGGGTGATGAGAAAATTCGTAGCGTTGTCCCCTCACGAATGAAGAGAAAATTGCTTGT
TTCTGTAAATACAGAGGGTTCGTTAAAAATAAAGCGACATGATATTATTATCACAAGACCGAAAGAGAAAAGCCCTGATGATGAAAAAGACACAGTCTCTTACAGGAGAC
AAGTCTTAAGAGGCACACTCAATATTGGGGATCTCTTCACGGACTTTGGTAACCTCGAGTCTCTATTGCTTCAAAGTCTTCTCCTCCATCACAAATCAAATTGGAAAGCC
TCTCATGCTCGACTAACGTTGTCTCAAGTTTGGCCTCTAATTCCTTTATCTCCAAGGATGATCGTGCAAGCTGTTGTTCGAGGTTTCGCTCGTTTCAAGTTCAAGTTTGA
GCTTTTCTCATTTCAAGTACTTCAAGTTCAAGCTTTCATCGCTTCAAGTACTCTAAGTTCAAGTTCGAGCATTCCTCACTGCAAGTACTTCAAGTTCCAGTTAAATCTTC
GCTCATTTCAAGTTCAAGTTCGAGCTTTCCTCACTTCAAGTACTCTAAGTTCAAGTTCGGGGGCTTCGCTTGTTTCAACTTCAAGTTCGGGCTTTCCTCACTTCAAGTAC
TCTAAGTTCAAGTTCAGGGGCTTCGCTCGTTTCAAGTTCAAGTTCGAGCTTTCCTCACTTCAAGTACTTCAAGTTCAAGCTTTCATCGCTTCAAGTGCTTTAAGTTCAAG
TTCAGGGCTTCGCTTGTTTCGAGTTCAAGTTCGAGCTTTCCCCACTGCAAGTACTCCAAGTTCTAGTTCAATCTTTGCTCATTTCAAGTTCAAGTTCAAGCTTTCATAA

mRNA sequence

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Protein sequence

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MRRKGKAKVADTLDITVEEIDDSEQAKENIDHRTSAFDRIGPSVTRSSVFQRLSTAAIEDESQHPTYGSTRPSAFQRLSMASEEKENVHSTPTTRLSAFQRLSVATKRSK
ERSPISVSNITETPIKTKGDEKIRSVVPSRMKRKLLVSVNTEGSLKIKRHDIIITRPKEKSPDDEKDTVSYRRQVLRGTLNIGDLFTDFGNLESLLLQSLLLHHKSNWKA
SHARLTLSQVWPLIPLSPRMIVQAVVRGFARFKFKFELFSFQVLQVQAFIASSTLSSSSSIPHCKYFKFQLNLRSFQVQVRAFLTSSTLSSSSGASLVSTSSSGFPHFKY
SKFKFRGFARFKFKFELSSLQVLQVQAFIASSALSSSSGLRLFRVQVRAFPTASTPSSSSIFAHFKFKFKLS

Spg028521 (gene) of Sponge gourd (cylindrica) v1 genome