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Spg028526 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg028526
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionTransposon TX1 uncharacterized 149 kDa protein
Genome locationscaffold7:12911842..12914864
RNA-Seq ExpressionSpg028526
SyntenySpg028526
Gene Ontology termsGO:0044237 - cellular metabolic process (biological process)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0044242.1 Transposon Tf2-9 polyprotein [Cucumis melo var. makuwa]2.6e-1934.69Show/hide
Query:  DEVMLEALIQSIALFEACSGLRLNWAKSSICGINIEEQEVLEVSSRLNCKMEQLPIMYLGLPLGGHPNFIFLATSLGQECIELEPMLMKFFWEGKEW---
        DE ML  L ++I LFE CSG ++NW KS++ G+N+ + E+L ++ +L CK+E+LP +YLGL LGG+P          ++ +  EPM+ +   +   W   
Subjt:  DEVMLEALIQSIALFEACSGLRLNWAKSSICGINIEEQEVLEVSSRLNCKMEQLPIMYLGLPLGGHPNFIFLATSLGQECIELEPMLMKFFWEGKEW---

Query:  ---------------------------------SALKH--RNL--ALIAKRGWRFMNEPNAVWTKVIISIHGSSPFEWHTAGKHVARLRSPWMNIS
                                         SALK   RN+   L+AK GWR+M E   +W +VI S +GS  F  HT  K    LRSPW + S
Subjt:  ---------------------------------SALKH--RNL--ALIAKRGWRFMNEPNAVWTKVIISIHGSSPFEWHTAGKHVARLRSPWMNIS

KAA0068192.1 mediator of RNA polymerase II transcription subunit 8 isoform X2 [Cucumis melo var. makuwa]3.3e-1937.66Show/hide
Query:  MLEALIQSIALFEACSGLRLNWAKSSICGINIEEQEVLEVSSRLNCKMEQLPIMYLGLPLGGHPNFIFLATSLGQECIELEPMLMKFFWEGKEWSALKHR
        ML  L ++I LFE CS  ++NW KS + G+N+ E  +L+ ++R+ CK E LPI+YLG  LG           LG                      +K  
Subjt:  MLEALIQSIALFEACSGLRLNWAKSSICGINIEEQEVLEVSSRLNCKMEQLPIMYLGLPLGGHPNFIFLATSLGQECIELEPMLMKFFWEGKEWSALKHR

Query:  NLALIAKRGWRFMNEPNAVWTKVIISIHGSSPFEWHTAGKHVARLRSPWMNISK
        N  L+AK GWR+  E +  W K+I  IHG   F+W T GK    LR PW+NIS+
Subjt:  NLALIAKRGWRFMNEPNAVWTKVIISIHGSSPFEWHTAGKHVARLRSPWMNISK

TYJ97221.1 putative LRR receptor-like serine/threonine-protein kinase [Cucumis melo var. makuwa]2.9e-2334.21Show/hide
Query:  MLEALIQSIALFEACSGLRLNWAKSSICGINIEEQEVLEVSSRLNCKMEQLPIMYLGLPLGGHPNF----------------------------------
        ML  L ++I LFE CS  ++NW KS++ G++I E  +L+ + R++CK E LPI+YL LPLGG+P                                    
Subjt:  MLEALIQSIALFEACSGLRLNWAKSSICGINIEEQEVLEVSSRLNCKMEQLPIMYLGLPLGGHPNF----------------------------------

Query:  -------IFLATSLGQECIELEPMLMKFFWEGK---------EWS--------------ALKHRNLALIAKRGWRFMNEPNAVWTKVIISIHGSSPFEWH
                +L+  + Q    LE +   FFWEG          +W+              ALK  N AL+AK GWRF  E  +   K+I SIHG  PF+W 
Subjt:  -------IFLATSLGQECIELEPMLMKFFWEGK---------EWS--------------ALKHRNLALIAKRGWRFMNEPNAVWTKVIISIHGSSPFEWH

Query:  TAGKHVARLRSPWMNISKRF-SLESSSL
        T  K    LRSPW +ISK + S+ES +L
Subjt:  TAGKHVARLRSPWMNISKRF-SLESSSL

TYK07807.1 putative ribonuclease H protein [Cucumis melo var. makuwa]5.3e-2538.89Show/hide
Query:  KYDEVMLEALIQSIALFEACSGLRLNWAKSSICGINIEEQEVLEVSSRLNCKMEQLPIMYLGLPLGGHPNFIFLATSL------------GQECIELEPM
        K+DEVMLE L +++ +FE CSG ++ W KSSICGIN+E+ ++L  ++ LNCK+E +P++YLGLPLGG+P        +            G     LE +
Subjt:  KYDEVMLEALIQSIALFEACSGLRLNWAKSSICGINIEEQEVLEVSSRLNCKMEQLPIMYLGLPLGGHPNFIFLATSL------------GQECIELEPM

Query:  LMKFFWEGK---------EW--------------SALKHRNLALIAKRGWRFMNEPNAVWTK
        + KFFW+G          +W                LKH+NLAL++K GWRF+ E N++  K
Subjt:  LMKFFWEGK---------EW--------------SALKHRNLALIAKRGWRFMNEPNAVWTK

XP_038880332.1 uncharacterized protein LOC120071973 [Benincasa hispida]2.7e-2933.91Show/hide
Query:  IDPTAIDTKYDEVMLEALIQSIALFEACSGLRLNWAKSSICGINIEEQEVLEVSSRLNCKMEQLPIMYLGLPLGGHPNFI--------------------
        +  T +  KY + M+E L ++I +FE CS  ++NW KS+ICGINIEE ++L V+++LNCK++ LP+MYLGLPLGG+P  +                    
Subjt:  IDPTAIDTKYDEVMLEALIQSIALFEACSGLRLNWAKSSICGINIEEQEVLEVSSRLNCKMEQLPIMYLGLPLGGHPNFI--------------------

Query:  ---------------------FLATSLGQECI--ELEPMLMKFFWEGKEWSALKH-----------------------RNLALIAKRGWRFMNEPNAVWT
                             +L+  L  E +   +E  +  FFWEG +   + H                       RNLA +AK GWR ++  N +W+
Subjt:  ---------------------FLATSLGQECI--ELEPMLMKFFWEGKEWSALKH-----------------------RNLALIAKRGWRFMNEPNAVWT

Query:  KVIISIHGSSPFEWHTAGKHVARLRSPWMNISK
        KV+ SIH    F+WHT+GK    LRS W++IS+
Subjt:  KVIISIHGSSPFEWHTAGKHVARLRSPWMNISK

TrEMBL top hitse value%identityAlignment
A0A5A7TLN3 Transposon Tf2-9 polyprotein1.2e-1934.69Show/hide
Query:  DEVMLEALIQSIALFEACSGLRLNWAKSSICGINIEEQEVLEVSSRLNCKMEQLPIMYLGLPLGGHPNFIFLATSLGQECIELEPMLMKFFWEGKEW---
        DE ML  L ++I LFE CSG ++NW KS++ G+N+ + E+L ++ +L CK+E+LP +YLGL LGG+P          ++ +  EPM+ +   +   W   
Subjt:  DEVMLEALIQSIALFEACSGLRLNWAKSSICGINIEEQEVLEVSSRLNCKMEQLPIMYLGLPLGGHPNFIFLATSLGQECIELEPMLMKFFWEGKEW---

Query:  ---------------------------------SALKH--RNL--ALIAKRGWRFMNEPNAVWTKVIISIHGSSPFEWHTAGKHVARLRSPWMNIS
                                         SALK   RN+   L+AK GWR+M E   +W +VI S +GS  F  HT  K    LRSPW + S
Subjt:  ---------------------------------SALKH--RNL--ALIAKRGWRFMNEPNAVWTKVIISIHGSSPFEWHTAGKHVARLRSPWMNIS

A0A5D3BF26 Putative LRR receptor-like serine/threonine-protein kinase1.4e-2334.21Show/hide
Query:  MLEALIQSIALFEACSGLRLNWAKSSICGINIEEQEVLEVSSRLNCKMEQLPIMYLGLPLGGHPNF----------------------------------
        ML  L ++I LFE CS  ++NW KS++ G++I E  +L+ + R++CK E LPI+YL LPLGG+P                                    
Subjt:  MLEALIQSIALFEACSGLRLNWAKSSICGINIEEQEVLEVSSRLNCKMEQLPIMYLGLPLGGHPNF----------------------------------

Query:  -------IFLATSLGQECIELEPMLMKFFWEGK---------EWS--------------ALKHRNLALIAKRGWRFMNEPNAVWTKVIISIHGSSPFEWH
                +L+  + Q    LE +   FFWEG          +W+              ALK  N AL+AK GWRF  E  +   K+I SIHG  PF+W 
Subjt:  -------IFLATSLGQECIELEPMLMKFFWEGK---------EWS--------------ALKHRNLALIAKRGWRFMNEPNAVWTKVIISIHGSSPFEWH

Query:  TAGKHVARLRSPWMNISKRF-SLESSSL
        T  K    LRSPW +ISK + S+ES +L
Subjt:  TAGKHVARLRSPWMNISKRF-SLESSSL

A0A5D3C786 Putative ribonuclease H protein2.6e-2538.89Show/hide
Query:  KYDEVMLEALIQSIALFEACSGLRLNWAKSSICGINIEEQEVLEVSSRLNCKMEQLPIMYLGLPLGGHPNFIFLATSL------------GQECIELEPM
        K+DEVMLE L +++ +FE CSG ++ W KSSICGIN+E+ ++L  ++ LNCK+E +P++YLGLPLGG+P        +            G     LE +
Subjt:  KYDEVMLEALIQSIALFEACSGLRLNWAKSSICGINIEEQEVLEVSSRLNCKMEQLPIMYLGLPLGGHPNFIFLATSL------------GQECIELEPM

Query:  LMKFFWEGK---------EW--------------SALKHRNLALIAKRGWRFMNEPNAVWTK
        + KFFW+G          +W                LKH+NLAL++K GWRF+ E N++  K
Subjt:  LMKFFWEGK---------EW--------------SALKHRNLALIAKRGWRFMNEPNAVWTK

A0A5D3DC06 Mediator of RNA polymerase II transcription subunit 8 isoform X21.6e-1937.66Show/hide
Query:  MLEALIQSIALFEACSGLRLNWAKSSICGINIEEQEVLEVSSRLNCKMEQLPIMYLGLPLGGHPNFIFLATSLGQECIELEPMLMKFFWEGKEWSALKHR
        ML  L ++I LFE CS  ++NW KS + G+N+ E  +L+ ++R+ CK E LPI+YLG  LG           LG                      +K  
Subjt:  MLEALIQSIALFEACSGLRLNWAKSSICGINIEEQEVLEVSSRLNCKMEQLPIMYLGLPLGGHPNFIFLATSLGQECIELEPMLMKFFWEGKEWSALKHR

Query:  NLALIAKRGWRFMNEPNAVWTKVIISIHGSSPFEWHTAGKHVARLRSPWMNISK
        N  L+AK GWR+  E +  W K+I  IHG   F+W T GK    LR PW+NIS+
Subjt:  NLALIAKRGWRFMNEPNAVWTKVIISIHGSSPFEWHTAGKHVARLRSPWMNISK

A0A6J1E196 uncharacterized protein LOC1110250196.4e-1632.2Show/hide
Query:  IALFEACSGLRLNWAKSSICGINIEEQEVLEVSSRLNCKMEQLPIMYLGLPLGGHPNFIFLATSLGQEC-----IELEPMLMKFFWEGK---------EW
        I+LF   SGLR+N AK+S+ GINI E E      ++ C++E++   YLGLPLGG+   I     L ++       E+  ++   FW G          +W
Subjt:  IALFEACSGLRLNWAKSSICGINIEEQEVLEVSSRLNCKMEQLPIMYLGLPLGGHPNFIFLATSLGQEC-----IELEPMLMKFFWEGK---------EW

Query:  --------------SALKHRNLALIAKRGWRFMNEPNAVWTKVIISIHGSSPFEWHTAGKHVARLRSPWMNISKRFS
                       A   +N AL+ K  W F  E NA+W +VI SI+G   + W T          PW +I+K  S
Subjt:  --------------SALKHRNLALIAKRGWRFMNEPNAVWTKVIISIHGSSPFEWHTAGKHVARLRSPWMNISKRFS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAACGCAATGGGGGATTGATCCAACCGCTATTGACACTAAATATGATGAAGTTATGCTCGAAGCTTTGATTCAATCAATTGCCCTTTTTGAAGCTTGTTCGGGTCT
TAGATTGAATTGGGCAAAATCCTCAATTTGTGGAATTAACATTGAAGAACAAGAGGTGCTGGAAGTTTCCTCTAGGCTTAACTGCAAGATGGAACAACTTCCAATTATGT
ATCTTGGGCTTCCTTTGGGAGGACATCCGAATTTTATCTTTTTGGCAACTAGTCTTGGACAAGAATGTATTGAGCTGGAGCCCATGTTGATGAAATTTTTCTGGGAAGGA
AAGGAATGGAGTGCTCTTAAGCATCGAAACCTTGCATTGATTGCTAAACGGGGATGGCGTTTTATGAATGAGCCAAATGCTGTTTGGACGAAGGTAATCATCAGTATTCA
TGGTAGTTCTCCATTTGAGTGGCATACAGCAGGTAAGCATGTTGCTAGACTTAGAAGCCCTTGGATGAATATTTCTAAGCGCTTTTCCCTTGAATCTTCTTCCTTGTGGC
ACAAGATTATTGTGAGTAAGTATGGTCCTTATCCTATGGAGTGGTTTTCGGGTGGGGCTAAAGGCACTTTAAAAACTCATGGAAAGACATTATCTTAG
mRNA sequenceShow/hide mRNA sequence
ATGGAAACGCAATGGGGGATTGATCCAACCGCTATTGACACTAAATATGATGAAGTTATGCTCGAAGCTTTGATTCAATCAATTGCCCTTTTTGAAGCTTGTTCGGGTCT
TAGATTGAATTGGGCAAAATCCTCAATTTGTGGAATTAACATTGAAGAACAAGAGGTGCTGGAAGTTTCCTCTAGGCTTAACTGCAAGATGGAACAACTTCCAATTATGT
ATCTTGGGCTTCCTTTGGGAGGACATCCGAATTTTATCTTTTTGGCAACTAGTCTTGGACAAGAATGTATTGAGCTGGAGCCCATGTTGATGAAATTTTTCTGGGAAGGA
AAGGAATGGAGTGCTCTTAAGCATCGAAACCTTGCATTGATTGCTAAACGGGGATGGCGTTTTATGAATGAGCCAAATGCTGTTTGGACGAAGGTAATCATCAGTATTCA
TGGTAGTTCTCCATTTGAGTGGCATACAGCAGGTAAGCATGTTGCTAGACTTAGAAGCCCTTGGATGAATATTTCTAAGCGCTTTTCCCTTGAATCTTCTTCCTTGTGGC
ACAAGATTATTGTGAGTAAGTATGGTCCTTATCCTATGGAGTGGTTTTCGGGTGGGGCTAAAGGCACTTTAAAAACTCATGGAAAGACATTATCTTAG
Protein sequenceShow/hide protein sequence
METQWGIDPTAIDTKYDEVMLEALIQSIALFEACSGLRLNWAKSSICGINIEEQEVLEVSSRLNCKMEQLPIMYLGLPLGGHPNFIFLATSLGQECIELEPMLMKFFWEG
KEWSALKHRNLALIAKRGWRFMNEPNAVWTKVIISIHGSSPFEWHTAGKHVARLRSPWMNISKRFSLESSSLWHKIIVSKYGPYPMEWFSGGAKGTLKTHGKTLS