; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg028538 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg028538
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionPolynucleotidyl transferase, ribonuclease H-like superfamily protein
Genome locationscaffold7:18320873..18322707
RNA-Seq ExpressionSpg028538
SyntenySpg028538
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
GO:0004523 - RNA-DNA hybrid ribonuclease activity (molecular function)
InterPro domainsIPR002156 - Ribonuclease H domain
IPR012337 - Ribonuclease H-like superfamily
IPR036397 - Ribonuclease H superfamily
IPR044730 - Ribonuclease H-like domain, plant type


Homology Show/hide homology
GenBank top hitse value%identityAlignment
AAM01179.2 Putative retroelement [Oryza sativa Japonica Group]8.4e-4531.46Show/hide
Query:  ESLLATVLRGRYYKDKDFLKAPLENNPSLTWRSIVWGRELFSRGYRWKVGNGNHIRIRDDPWLKRKGNRSPIPPEGQLQRERVCNLIKEDGKWNERLVKE
        +SL A +L+  YY +   +      N S  WR+I +G EL  +G  W++GNG  +R+  DPW+ R  +R PI  +   +   V +LI + G W+   + +
Subjt:  ESLLATVLRGRYYKDKDFLKAPLENNPSLTWRSIVWGRELFSRGYRWKVGNGNHIRIRDDPWLKRKGNRSPIPPEGQLQRERVCNLIKEDGKWNERLVKE

Query:  LFSPEDAEEILNIPLGSRKAKDEIIWAEHPKGVFSVKSACQLATSIEEANHASSSDNASSKAFWKKFWKLNLIPRAKLSARRKLIPTS-YGNG----IMA
         F P DAE ILNI L SR   D I W     G FSV+SA  LA ++   +  SSS    +   W   WK N        A +KL P S   NG    I+ 
Subjt:  LFSPEDAEEILNIPLGSRKAKDEIIWAEHPKGVFSVKSACQLATSIEEANHASSSDNASSKAFWKKFWKLNLIPRAKLSARRKLIPTS-YGNG----IMA

Query:  RLEEG---DLNKAAVIVWNIWNYRNKILSSENTAGQKQIHRFIGSSIDDLSKVRN------------ANLEDKRLKSL-RSQE----SWSPPPIPSLKLN
         LE+    D     +++W IW+ RN+I+  +   G     RFI S +  L++++              ++  K+L S+ RS+E     W  P   S+KLN
Subjt:  RLEEG---DLNKAAVIVWNIWNYRNKILSSENTAGQKQIHRFIGSSIDDLSKVRN------------ANLEDKRLKSL-RSQE----SWSPPPIPSLKLN

Query:  VDASWSSAKGAGGVGWIVRDSSGSLVAAGSKKITDKWPIIALEALAIKEGLSMYLKNEACKSIPLIVESDSLTLIKAIQGEETDLSEARNIVEEIEDLAR
        VD S+  + G GG+G ++R+ +G ++ A    +      +  E LA ++GL++ L+      +P+++E+D L +I   +      SE   ++ EI+ L  
Subjt:  VDASWSSAKGAGGVGWIVRDSSGSLVAAGSKKITDKWPIIALEALAIKEGLSMYLKNEACKSIPLIVESDSLTLIKAIQGEETDLSEARNIVEEIEDLAR

Query:  EAAKISFNWSPRSCNRASLALANDAR
            ISF+   RS N  S  LAN  R
Subjt:  EAAKISFNWSPRSCNRASLALANDAR

ABB46931.2 retrotransposon protein, putative, unclassified [Oryza sativa Japonica Group]8.4e-4531.46Show/hide
Query:  ESLLATVLRGRYYKDKDFLKAPLENNPSLTWRSIVWGRELFSRGYRWKVGNGNHIRIRDDPWLKRKGNRSPIPPEGQLQRERVCNLIKEDGKWNERLVKE
        +SL A +L+  YY +   +      N S  WR+I +G EL  +G  W++GNG  +R+  DPW+ R  +R PI  +   +   V +LI + G W+   + +
Subjt:  ESLLATVLRGRYYKDKDFLKAPLENNPSLTWRSIVWGRELFSRGYRWKVGNGNHIRIRDDPWLKRKGNRSPIPPEGQLQRERVCNLIKEDGKWNERLVKE

Query:  LFSPEDAEEILNIPLGSRKAKDEIIWAEHPKGVFSVKSACQLATSIEEANHASSSDNASSKAFWKKFWKLNLIPRAKLSARRKLIPTS-YGNG----IMA
         F P DAE ILNI L SR   D I W     G FSV+SA  LA ++   +  SSS    +   W   WK N        A +KL P S   NG    I+ 
Subjt:  LFSPEDAEEILNIPLGSRKAKDEIIWAEHPKGVFSVKSACQLATSIEEANHASSSDNASSKAFWKKFWKLNLIPRAKLSARRKLIPTS-YGNG----IMA

Query:  RLEEG---DLNKAAVIVWNIWNYRNKILSSENTAGQKQIHRFIGSSIDDLSKVRN------------ANLEDKRLKSL-RSQE----SWSPPPIPSLKLN
         LE+    D     +++W IW+ RN+I+  +   G     RFI S +  L++++              ++  K+L S+ RS+E     W  P   S+KLN
Subjt:  RLEEG---DLNKAAVIVWNIWNYRNKILSSENTAGQKQIHRFIGSSIDDLSKVRN------------ANLEDKRLKSL-RSQE----SWSPPPIPSLKLN

Query:  VDASWSSAKGAGGVGWIVRDSSGSLVAAGSKKITDKWPIIALEALAIKEGLSMYLKNEACKSIPLIVESDSLTLIKAIQGEETDLSEARNIVEEIEDLAR
        VD S+  + G GG+G ++R+ +G ++ A    +      +  E LA ++GL++ L+      +P+++E+D L +I   +      SE   ++ EI+ L  
Subjt:  VDASWSSAKGAGGVGWIVRDSSGSLVAAGSKKITDKWPIIALEALAIKEGLSMYLKNEACKSIPLIVESDSLTLIKAIQGEETDLSEARNIVEEIEDLAR

Query:  EAAKISFNWSPRSCNRASLALANDAR
            ISF+   RS N  S  LAN  R
Subjt:  EAAKISFNWSPRSCNRASLALANDAR

EEC68887.1 hypothetical protein OsI_37529 [Oryza sativa Indica Group]2.3e-4230.79Show/hide
Query:  ESLLATVLRGRYYKDKDFLKAPLENNPSLTWRSIVWGRELFSRGYRWKVGNGNHIRIRDDPWLKRKGNRSPIPPEGQLQRERVCNLIKEDGKWNERLVKE
        +SL A VL+ +Y+     +     +N S  WRSI +G +L  +G  W+VGNGN IRI  D WL R  +R PI  +   + + V +LI EDG W+   + +
Subjt:  ESLLATVLRGRYYKDKDFLKAPLENNPSLTWRSIVWGRELFSRGYRWKVGNGNHIRIRDDPWLKRKGNRSPIPPEGQLQRERVCNLIKEDGKWNERLVKE

Query:  LFSPEDAEEILNIPLGSRKAKDEIIWAEHPKGVFSVKSACQLATSIEEANHASSSDNASSKAFWKKFWKLNLIPRAKLSARRKLIPTSYGNGIMARLEEG
         F   DAE ILNI + SR  +D I W     G+FSV+SA +LA  +     +SSS   +    W+  WK  +  + K+ A R        +  +A +   
Subjt:  LFSPEDAEEILNIPLGSRKAKDEIIWAEHPKGVFSVKSACQLATSIEEANHASSSDNASSKAFWKKFWKLNLIPRAKLSARRKLIPTSYGNGIMARLEEG

Query:  DLNKAAVIVWNIWNYRNKILSSENTAGQKQIHRFIGSSIDDLSKVRNANLED----------------KRLKSLRS-QESWSPPPIPSLKLNVDASWSSA
              + +W  W  RN+++  ++    +   RFI S +D L ++R A   D                 + + L + Q  W  P    +KLNVD S+ ++
Subjt:  DLNKAAVIVWNIWNYRNKILSSENTAGQKQIHRFIGSSIDDLSKVRNANLED----------------KRLKSLRS-QESWSPPPIPSLKLNVDASWSSA

Query:  KGAGGVGWIVRDSSGSLVAAGSKKITDKWPIIALEALAIKEGLSMYLKNEACKSIPLIVESDSLTLIKAIQGEETDLSEARNIVEEIEDLAREAAKISFN
         G GG+G I+R+S+G ++    K +      +  E  A  EGL + +       +P+ VE+D  ++++ +QG   D S   NI+ E   L      IS  
Subjt:  KGAGGVGWIVRDSSGSLVAAGSKKITDKWPIIALEALAIKEGLSMYLKNEACKSIPLIVESDSLTLIKAIQGEETDLSEARNIVEEIEDLAREAAKISFN

Query:  WSPRSCNRASLALANDARS
           RS N  S  LAN AR+
Subjt:  WSPRSCNRASLALANDARS

XP_006491472.1 uncharacterized protein LOC102626455 [Citrus sinensis]2.1e-4328.66Show/hide
Query:  SLLATVLRGRYYKDKDFLKAPLENNPSLTWRSIVWGRELFSRGYRWKVGNGNHIRIRDDPWLKRKGNRSPIPPEGQLQRERVCNLIKEDGKWNERLVKEL
        SL+A V++ RYYK+  F  A + +NPS  WRSI+WG ++  +G RW++G+G  + +  D W+ R     PI P+       V +LI  + KW    +++ 
Subjt:  SLLATVLRGRYYKDKDFLKAPLENNPSLTWRSIVWGRELFSRGYRWKVGNGNHIRIRDDPWLKRKGNRSPIPPEGQLQRERVCNLIKEDGKWNERLVKEL

Query:  FSPEDAEEILNIPLGSRKAKDEIIWAEHPKGVFSVKSACQLATSIEEANHASSSDNASSKAFWKKFWKLNLIPRAKL---SARRKLIPTSYG--------
        F  ED E IL I L S K +DE++W    KG +SVKS  QLA +    N   SS+  SS   WK  W L+L  + K+    A + ++PT+          
Subjt:  FSPEDAEEILNIPLGSRKAKDEIIWAEHPKGVFSVKSACQLATSIEEANHASSSDNASSKAFWKKFWKLNLIPRAKL---SARRKLIPTSYG--------

Query:  -------------------------------------------------NGIMARLEEGDLNKAAVIVWNIWNYRNKILSSENTAGQKQIHRFIGSSIDD
                                                           + +R    +     V  W IW+ RNK +      G+K   RF+ +  D 
Subjt:  -------------------------------------------------NGIMARLEEGDLNKAAVIVWNIWNYRNKILSSENTAGQKQIHRFIGSSIDD

Query:  LSKV-----RNANLEDKRLKSLRSQESWSPPPIPSLKLNVDASWSSAKGAGGVGWIVRDSSGSLVAAGSKKITDKWPIIALEALAIKEGLSMYLKNEACK
        + K      +  N+   + + +  Q+ W PP    LKLNVDA+ S+     G+G IVRD+ G ++A G K+   +  +   EA AI  GL +        
Subjt:  LSKV-----RNANLEDKRLKSLRSQESWSPPPIPSLKLNVDASWSSAKGAGGVGWIVRDSSGSLVAAGSKKITDKWPIIALEALAIKEGLSMYLKNEACK

Query:  SIPLIVESDSLTLIKAIQGEETDLSEARNIVEEIEDLAREAAKISFNWSPRSCNRASLALANDA
        S  LIVESD   +++ +   +   +E   I+ ++   ++E  ++ F++ PR+CN  + ALA  A
Subjt:  SIPLIVESDSLTLIKAIQGEETDLSEARNIVEEIEDLAREAAKISFNWSPRSCNRASLALANDA

XP_024037590.1 uncharacterized protein LOC112097210 [Citrus clementina]4.2e-4429.17Show/hide
Query:  SLLATVLRGRYYKDKDFLKAPLENNPSLTWRSIVWGRELFSRGYRWKVGNGNHIRIRDDPWLKRKGNRSPIPPEGQLQRERVCNLIKEDGKWNERLVKEL
        SL+A VL+ RY+K   F+ A L + PS  WRSIVWGR++  +G RW++GNG ++ +  + W+ R     PI          V  LI E  +W E L+ + 
Subjt:  SLLATVLRGRYYKDKDFLKAPLENNPSLTWRSIVWGRELFSRGYRWKVGNGNHIRIRDDPWLKRKGNRSPIPPEGQLQRERVCNLIKEDGKWNERLVKEL

Query:  FSPEDAEEILNIPLGSRKAKDEIIWAEHPKGVFSVKSACQLATSIEEANHASSSDNASSKAFWKKFWKLNLIPRAKL---SARRKLIPTSYGNGIMARLE
        F PEDAE I+ IPL  R  +D++IW    KG +SVKS  Q+A  I+     S S++   +  W+  WKL +  + K+    A   L+PT+        L+
Subjt:  FSPEDAEEILNIPLGSRKAKDEIIWAEHPKGVFSVKSACQLATSIEEANHASSSDNASSKAFWKKFWKLNLIPRAKL---SARRKLIPTSYGNGIMARLE

Query:  EG-----------------DLNKA----------------------------------------AVIVWNIWNYRNKILSSENTAGQKQIHRFIGSSIDD
        E                  + N+A                                        A ++W IW  RNK L         ++     + ++ 
Subjt:  EG-----------------DLNKA----------------------------------------AVIVWNIWNYRNKILSSENTAGQKQIHRFIGSSIDD

Query:  LSKVRNANLEDKRLKSLRSQESWSPPPIPSLKLNVDASWSSAKGAGGVGWIVRDSSGSLVAAGSKKITDKWPIIALEALAIKEGLSMYLKNEACKSIPLI
          K+R   +  K   +   Q+ WSPPP    K+NVDA+        G+G +VRDS G+  AA  K +     +   EA A++ GL +  K         I
Subjt:  LSKVRNANLEDKRLKSLRSQESWSPPPIPSLKLNVDASWSSAKGAGGVGWIVRDSSGSLVAAGSKKITDKWPIIALEALAIKEGLSMYLKNEACKSIPLI

Query:  VESDSLTLIKAIQGEETDLSEARNIVEEIEDLAREAAKISFNWSPRSCNRASLALA
         ESDSL +I  I  + + L+E   ++ +I++  +         SPR CN A+ +LA
Subjt:  VESDSLTLIKAIQGEETDLSEARNIVEEIEDLAREAAKISFNWSPRSCNRASLALA

TrEMBL top hitse value%identityAlignment
A0A803P9P5 Uncharacterized protein8.5e-4329.49Show/hide
Query:  SLLATVLRGRYYKDKDFLKAPLENNPSLTWRSIVWGRELFSRGYRWKVGNGNHIRIRDDPWLKRKGNRSPIPPEGQLQRERVCNLIKEDGKWNERLVKEL
        SLL  +L+ RY+K   FL+A + + PSLTWRSI+WG+EL ++G RWKVGNGN I    DPWL    +  P+  +      +V  LI    +WN  L+++ 
Subjt:  SLLATVLRGRYYKDKDFLKAPLENNPSLTWRSIVWGRELFSRGYRWKVGNGNHIRIRDDPWLKRKGNRSPIPPEGQLQRERVCNLIKEDGKWNERLVKEL

Query:  FSPEDAEEILNIPLGSRKAKDEIIWAEHPKGVFSVKSACQLATSIEEANHASSSDNASSKAFWKKFWKLNLIPRAKL---SARRKLIP------------
        F   D  +I +IPL      D++IW     G++SVKS   LAT +EE   A+SS+N  S  +WKKFW L L  + K+    A    +P            
Subjt:  FSPEDAEEILNIPLGSRKAKDEIIWAEHPKGVFSVKSACQLATSIEEANHASSSDNASSKAFWKKFWKLNLIPRAKL---SARRKLIP------------

Query:  --------------------------------------TSYGNGIMARLE-------EGDLNKAAVIVWNIWNYRNKILSSENTAGQKQIHRFIGSSIDD
                                               ++   +M  L+          + + A I+W+IWN RNK      T   +    F    I++
Subjt:  --------------------------------------TSYGNGIMARLE-------EGDLNKAAVIVWNIWNYRNKILSSENTAGQKQIHRFIGSSIDD

Query:  LSKVR-NANLEDKRL-KSLRSQES---WSPPPIPSLKLNVDASWSSAKGAGGVGWIVRDSSGSLVAAGSKKITDKWPIIALEALAIKEGLSMYLKNEACK
            R N +  D     + RSQ+    W  PP   LKLN DA+ ++ +   G G I+R+ +G ++AA +      +    +EALA+   L  +LK+    
Subjt:  LSKVR-NANLEDKRL-KSLRSQES---WSPPPIPSLKLNVDASWSSAKGAGGVGWIVRDSSGSLVAAGSKKITDKWPIIALEALAIKEGLSMYLKNEACK

Query:  SIPL-IVESDSLTLIKAIQGEETDLSEARNIVEEIEDLAREAAKISFNWSPRSCNRASLALANDARSI
         +P+  +E+DSL ++K +Q  +  +S+   ++  I  L     +   + + RS N A+  LA  A S+
Subjt:  SIPL-IVESDSLTLIKAIQGEETDLSEARNIVEEIEDLAREAAKISFNWSPRSCNRASLALANDARSI

A0A803QEG9 Uncharacterized protein6.5e-4328.27Show/hide
Query:  SLLATVLRGRYYKDKDFLKAPLENNPSLTWRSIVWGRELFSRGYRWKVGNGNHIRIRDDPWLKRKGNRSPI----PPEGQLQRERVCNLIKEDGKWNERL
        SLL+T+L+ +Y+    FL+A + ++PSLTW+ I WGREL + G RWK+G G  +R   DPWL    +  PI    PP G      V NLI ++ +WN  L
Subjt:  SLLATVLRGRYYKDKDFLKAPLENNPSLTWRSIVWGRELFSRGYRWKVGNGNHIRIRDDPWLKRKGNRSPI----PPEGQLQRERVCNLIKEDGKWNERL

Query:  VKELFSPEDAEEILNIPLGSRKAKDEIIWAEHPKGVFSVKSACQLATSIEEANHASSSDNASSKAFWKKFWKLNLIPRAKLSA---------------RR
        +++ F P D E+IL +PL     +D++IW  H  G F+V+SA  LATS+E  N   SS + S+  +WK FW L +  + K+ A               RR
Subjt:  VKELFSPEDAEEILNIPLGSRKAKDEIIWAEHPKGVFSVKSACQLATSIEEANHASSSDNASSKAFWKKFWKLNLIPRAKLSA---------------RR

Query:  KLIPTS--------------------YGNGI------------MARLEEGD--------LNKAAV-----IVWNIWNYRNKILSSENTAGQKQIHRFIGS
        K+I  S                    Y   +               ++ GD         NKA +     I+W IW  RNK++  +N      +  F   
Subjt:  KLIPTS--------------------YGNGI------------MARLEEGD--------LNKAAV-----IVWNIWNYRNKILSSENTAGQKQIHRFIGS

Query:  SIDDLSKVRN-----------------ANLEDKRLKSLRSQESWSPPPIPSLKLNVDASWSSAKGAGGVGWIVRDSSGSLVAAGSKKITDKWPIIALEAL
         + +    ++                 +    K   +  +  SW PP     KLN DA+  ++    GVG ++RD+SGS+  A +  I   +    +EA 
Subjt:  SIDDLSKVRN-----------------ANLEDKRLKSLRSQESWSPPPIPSLKLNVDASWSSAKGAGGVGWIVRDSSGSLVAAGSKKITDKWPIIALEAL

Query:  AIKEGLSMYLKNEACKSIPLI-VESDSLTLIKAIQGEETDLSEARNIVEEIEDLAREAAKISFNWSPRSCNRASLALANDA
        A+   L+  L+ +    +P+  +E+D+L ++ A++      SE  +++ ++  L      +S +   R+ N A+  LA  A
Subjt:  AIKEGLSMYLKNEACKSIPLI-VESDSLTLIKAIQGEETDLSEARNIVEEIEDLAREAAKISFNWSPRSCNRASLALANDA

A0A803QQL5 Uncharacterized protein2.6e-4428.45Show/hide
Query:  ESLLATVLRGRYYKDKDFLKAPLENNPSLTWRSIVWGRELFSRGYRWKVGNGNHIRIRDDPWLKRKGNRSPIPPEGQLQRERVCNLIKEDGKWNERLVKE
        +SLL  +L+ RY+    FL APL ++PS TW+ I WGREL  +G RWK+G+G  I    DPW+  + +  PI   G      V N I E+ +WN  L+++
Subjt:  ESLLATVLRGRYYKDKDFLKAPLENNPSLTWRSIVWGRELFSRGYRWKVGNGNHIRIRDDPWLKRKGNRSPIPPEGQLQRERVCNLIKEDGKWNERLVKE

Query:  LFSPEDAEEILNIPLGSRKAKDEIIWAEHPKGVFSVKSACQLATSIEEANHASSSDNASSKAFWKKFWKLNLIPRAKLSA---------------RRKLI
         FS  D + IL IPL    + D +IW  H  G ++V +   LA +I++ +H S+S NASS  +W  FW + L P+ K+ A               +RK+I
Subjt:  LFSPEDAEEILNIPLGSRKAKDEIIWAEHPKGVFSVKSACQLATSIEEANHASSSDNASSKAFWKKFWKLNLIPRAKLSA---------------RRKLI

Query:  P-----------TSYGNGIM---------------------ARLEEGD-------------LNKAAVIVWNIWNYRNKILSSENTAGQKQIHRFIGSSID
                     S G+ +                      + + +GD             + +    +W IW  RN+++ ++     +    F  + ++
Subjt:  P-----------TSYGNGIM---------------------ARLEEGD-------------LNKAAVIVWNIWNYRNKILSSENTAGQKQIHRFIGSSID

Query:  DLSKVR------------NANLEDKRLKSLR--SQESWSPPPIPSLKLNVDASWSSAKGAGGVGWIVRDSSGSLVAAGSKKITDKWPIIALEALAIKEGL
        +    +            N  L+ + L ++R  +   W PPP  + KLNVDA+  +++   GVG ++R SSGS+VAA SK++   +    +EALA+   L
Subjt:  DLSKVR------------NANLEDKRLKSLR--SQESWSPPPIPSLKLNVDASWSSAKGAGGVGWIVRDSSGSLVAAGSKKITDKWPIIALEALAIKEGL

Query:  SMYLKNEACKSIPLI-VESDSLTLIKAIQGEETDLSEARNIVEEIEDLAREAAKISFNWSPRSCNRASLALANDARSI
        +  L+ +    +PL  VE+D+L +  A+Q      S   +I+ +I  L      ++ +   R+ N+A+  LA  A  +
Subjt:  SMYLKNEACKSIPLI-VESDSLTLIKAIQGEETDLSEARNIVEEIEDLAREAAKISFNWSPRSCNRASLALANDARSI

Q33AJ4 Retrotransposon protein, putative, unclassified4.1e-4531.46Show/hide
Query:  ESLLATVLRGRYYKDKDFLKAPLENNPSLTWRSIVWGRELFSRGYRWKVGNGNHIRIRDDPWLKRKGNRSPIPPEGQLQRERVCNLIKEDGKWNERLVKE
        +SL A +L+  YY +   +      N S  WR+I +G EL  +G  W++GNG  +R+  DPW+ R  +R PI  +   +   V +LI + G W+   + +
Subjt:  ESLLATVLRGRYYKDKDFLKAPLENNPSLTWRSIVWGRELFSRGYRWKVGNGNHIRIRDDPWLKRKGNRSPIPPEGQLQRERVCNLIKEDGKWNERLVKE

Query:  LFSPEDAEEILNIPLGSRKAKDEIIWAEHPKGVFSVKSACQLATSIEEANHASSSDNASSKAFWKKFWKLNLIPRAKLSARRKLIPTS-YGNG----IMA
         F P DAE ILNI L SR   D I W     G FSV+SA  LA ++   +  SSS    +   W   WK N        A +KL P S   NG    I+ 
Subjt:  LFSPEDAEEILNIPLGSRKAKDEIIWAEHPKGVFSVKSACQLATSIEEANHASSSDNASSKAFWKKFWKLNLIPRAKLSARRKLIPTS-YGNG----IMA

Query:  RLEEG---DLNKAAVIVWNIWNYRNKILSSENTAGQKQIHRFIGSSIDDLSKVRN------------ANLEDKRLKSL-RSQE----SWSPPPIPSLKLN
         LE+    D     +++W IW+ RN+I+  +   G     RFI S +  L++++              ++  K+L S+ RS+E     W  P   S+KLN
Subjt:  RLEEG---DLNKAAVIVWNIWNYRNKILSSENTAGQKQIHRFIGSSIDDLSKVRN------------ANLEDKRLKSL-RSQE----SWSPPPIPSLKLN

Query:  VDASWSSAKGAGGVGWIVRDSSGSLVAAGSKKITDKWPIIALEALAIKEGLSMYLKNEACKSIPLIVESDSLTLIKAIQGEETDLSEARNIVEEIEDLAR
        VD S+  + G GG+G ++R+ +G ++ A    +      +  E LA ++GL++ L+      +P+++E+D L +I   +      SE   ++ EI+ L  
Subjt:  VDASWSSAKGAGGVGWIVRDSSGSLVAAGSKKITDKWPIIALEALAIKEGLSMYLKNEACKSIPLIVESDSLTLIKAIQGEETDLSEARNIVEEIEDLAR

Query:  EAAKISFNWSPRSCNRASLALANDAR
            ISF+   RS N  S  LAN  R
Subjt:  EAAKISFNWSPRSCNRASLALANDAR

Q8S5K1 Putative retroelement4.1e-4531.46Show/hide
Query:  ESLLATVLRGRYYKDKDFLKAPLENNPSLTWRSIVWGRELFSRGYRWKVGNGNHIRIRDDPWLKRKGNRSPIPPEGQLQRERVCNLIKEDGKWNERLVKE
        +SL A +L+  YY +   +      N S  WR+I +G EL  +G  W++GNG  +R+  DPW+ R  +R PI  +   +   V +LI + G W+   + +
Subjt:  ESLLATVLRGRYYKDKDFLKAPLENNPSLTWRSIVWGRELFSRGYRWKVGNGNHIRIRDDPWLKRKGNRSPIPPEGQLQRERVCNLIKEDGKWNERLVKE

Query:  LFSPEDAEEILNIPLGSRKAKDEIIWAEHPKGVFSVKSACQLATSIEEANHASSSDNASSKAFWKKFWKLNLIPRAKLSARRKLIPTS-YGNG----IMA
         F P DAE ILNI L SR   D I W     G FSV+SA  LA ++   +  SSS    +   W   WK N        A +KL P S   NG    I+ 
Subjt:  LFSPEDAEEILNIPLGSRKAKDEIIWAEHPKGVFSVKSACQLATSIEEANHASSSDNASSKAFWKKFWKLNLIPRAKLSARRKLIPTS-YGNG----IMA

Query:  RLEEG---DLNKAAVIVWNIWNYRNKILSSENTAGQKQIHRFIGSSIDDLSKVRN------------ANLEDKRLKSL-RSQE----SWSPPPIPSLKLN
         LE+    D     +++W IW+ RN+I+  +   G     RFI S +  L++++              ++  K+L S+ RS+E     W  P   S+KLN
Subjt:  RLEEG---DLNKAAVIVWNIWNYRNKILSSENTAGQKQIHRFIGSSIDDLSKVRN------------ANLEDKRLKSL-RSQE----SWSPPPIPSLKLN

Query:  VDASWSSAKGAGGVGWIVRDSSGSLVAAGSKKITDKWPIIALEALAIKEGLSMYLKNEACKSIPLIVESDSLTLIKAIQGEETDLSEARNIVEEIEDLAR
        VD S+  + G GG+G ++R+ +G ++ A    +      +  E LA ++GL++ L+      +P+++E+D L +I   +      SE   ++ EI+ L  
Subjt:  VDASWSSAKGAGGVGWIVRDSSGSLVAAGSKKITDKWPIIALEALAIKEGLSMYLKNEACKSIPLIVESDSLTLIKAIQGEETDLSEARNIVEEIEDLAR

Query:  EAAKISFNWSPRSCNRASLALANDAR
            ISF+   RS N  S  LAN  R
Subjt:  EAAKISFNWSPRSCNRASLALANDAR

SwissProt top hitse value%identityAlignment
P93295 Uncharacterized mitochondrial protein AtMg003102.9e-0836.99Show/hide
Query:  SLLATVLRGRYYKDKDFLKAPLENNPSLTWRSIVWGRELFSRGYRWKVGNGNHIRIRDDPWLKRKGNRSPIPP
        +LL+ +LR RY+     ++  +   PS  WRSI+ GREL SRG    +G+G H ++  D W+    + +P+PP
Subjt:  SLLATVLRGRYYKDKDFLKAPLENNPSLTWRSIVWGRELFSRGYRWKVGNGNHIRIRDDPWLKRKGNRSPIPP

Arabidopsis top hitse value%identityAlignment
AT2G34320.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein6.7e-0820.92Show/hide
Query:  IVWNIWNYRNKILSSENTAGQKQIHRFIGSSIDDLSKVRNANLEDKRLKSLRS-QESWSPPPIPSLKLNVDASWSSAKGAGGVGWIVRDSSGSLVAAGSK
        ++W +W  RN+++         ++ R      ++ S  R    +    +  R+    W  PP   +K N DA+W       G+GWI+R+ SG ++  G++
Subjt:  IVWNIWNYRNKILSSENTAGQKQIHRFIGSSIDDLSKVRNANLEDKRLKSLRS-QESWSPPPIPSLKLNVDASWSSAKGAGGVGWIVRDSSGSLVAAGSK

Query:  KITDKWPIIALEALAIKEGLSMYLKNEACKSIPLIVESDSLTLIKAIQGEETDLSEARNIVEEIEDLAREAAKISFNWSPRSCNRASLALANDARS
         +     ++  E  A++  +   L         +I ESD+  L+  +  ++      +  +E+I+ L     ++ F ++PR  N+ +  +A ++ S
Subjt:  KITDKWPIIALEALAIKEGLSMYLKNEACKSIPLIVESDSLTLIKAIQGEETDLSEARNIVEEIEDLAREAAKISFNWSPRSCNRASLALANDARS

AT3G09510.1 Ribonuclease H-like superfamily protein3.8e-1126.59Show/hide
Query:  LRGRYYKDKDFLKAPLENNPSLTWRSIVWGRELFSRGYRWKVGNGNHIRIRDDPWLKRKGNRSPIPPEGQLQRERVCNLIKEDGK---WNERLVKELFSP
        ++ RY+KD   L A +    S  W S++ G  L  +G R  +G+G +IRI  D  +     R P+  E   +   + NL +  G    W++  + +    
Subjt:  LRGRYYKDKDFLKAPLENNPSLTWRSIVWGRELFSRGYRWKVGNGNHIRIRDDPWLKRKGNRSPIPPEGQLQRERVCNLIKEDGK---WNERLVKELFSP

Query:  EDAEEILNIPLGSRKAKDEIIWAEHPKGVFSVKSACQLATSIEEANHASSSDNASSKAFWKKFWKLNLIPRAK
         D   I  I L   K  D+IIW  +  G ++V+S   L T     N  + +    S     + W L ++P+ K
Subjt:  EDAEEILNIPLGSRKAKDEIIWAEHPKGVFSVKSACQLATSIEEANHASSSDNASSKAFWKKFWKLNLIPRAK

AT4G29090.1 Ribonuclease H-like superfamily protein2.5e-1531.02Show/hide
Query:  ESLLATVLRGRYYKDKDFLKAPLENNPSLTWRSIVWGRELFSRGYRWKVGNGNHIRIRDDPWLKRKG-----NRSPIPPEGQLQRE---RVCNLIKEDGK
        ESL+A V + RY+   D L APL + PS  W+SI   +E+  +G R  VGNG  I I    WL  K          +PP+         +V +LI E G+
Subjt:  ESLLATVLRGRYYKDKDFLKAPLENNPSLTWRSIVWGRELFSRGYRWKVGNGNHIRIRDDPWLKRKG-----NRSPIPPEGQLQRE---RVCNLIKEDGK

Query:  -WNERLVKELFSPEDAEEILNIPLGSRKAKDEIIWAEHPKGVFSVKSACQLATSIEEANHASSSDNASSKA---FWKKFWKLNLIPR
         W + +++ LF   + + I  +  G R+  D   W     G ++VKS   + T I   N  SS    S  +    ++K WK    P+
Subjt:  -WNERLVKELFSPEDAEEILNIPLGSRKAKDEIIWAEHPKGVFSVKSACQLATSIEEANHASSSDNASSKA---FWKKFWKLNLIPR

AT5G65005.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein3.4e-0421.54Show/hide
Query:  IVWNIWNYRNK-ILSSENTAGQKQIHRFIGSSIDDL-SKVRNANLEDKRLKSLRSQESWSPPPIPSLKLNVDASWSSAKGAGGVGWIVRDSSGSLVAAGS
        ++W IW   N  + +   T  Q  +   +  + + L + + N      R         WSPP    LK N DAS        G+GWI+R+S G+++  G 
Subjt:  IVWNIWNYRNK-ILSSENTAGQKQIHRFIGSSIDDL-SKVRNANLEDKRLKSLRSQESWSPPPIPSLKLNVDASWSSAKGAGGVGWIVRDSSGSLVAAGS

Query:  KKITDKWPIIALEALAIKEGLSMYLKNEACKSIPLIVESDSLTLIKAIQGEETDLSEARNIVEEIEDLAREAAKISFNWSPRSCNRASLALANDA
         K   +      E   +   +     +       +I E D+ T+ + I  + ++    ++ ++ I+        I F++  R  N  +  LA  A
Subjt:  KKITDKWPIIALEALAIKEGLSMYLKNEACKSIPLIVESDSLTLIKAIQGEETDLSEARNIVEEIEDLAREAAKISFNWSPRSCNRASLALANDA

ATMG00310.1 RNA-directed DNA polymerase (reverse transcriptase)-related family protein2.1e-0936.99Show/hide
Query:  SLLATVLRGRYYKDKDFLKAPLENNPSLTWRSIVWGRELFSRGYRWKVGNGNHIRIRDDPWLKRKGNRSPIPP
        +LL+ +LR RY+     ++  +   PS  WRSI+ GREL SRG    +G+G H ++  D W+    + +P+PP
Subjt:  SLLATVLRGRYYKDKDFLKAPLENNPSLTWRSIVWGRELFSRGYRWKVGNGNHIRIRDDPWLKRKGNRSPIPP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACCATTCATTTATTTCCAAGAAGAGAGATTAGGGCTTTAAGAAAAGCAAAAGGAAGTGAAGAAAGCCTATTAGCCACAGTTCTAAGGGGCAGATACTACAAGGATAA
AGATTTTCTCAAAGCCCCCTTAGAAAATAACCCGTCCCTGACATGGCGTAGCATTGTGTGGGGTCGAGAGCTTTTCTCCAGAGGATACAGGTGGAAGGTTGGCAATGGAA
ATCATATAAGAATTAGGGATGACCCGTGGCTGAAAAGAAAAGGAAACAGGTCCCCTATCCCCCCTGAGGGGCAGCTGCAAAGGGAGAGAGTCTGCAATCTGATAAAAGAG
GATGGCAAATGGAACGAAAGGCTTGTCAAGGAGTTGTTCTCGCCGGAGGATGCAGAGGAAATTCTTAATATTCCTCTAGGTAGCAGAAAGGCCAAGGATGAAATTATTTG
GGCTGAGCATCCGAAGGGGGTTTTTTCAGTAAAATCAGCTTGTCAGCTAGCTACTAGCATAGAGGAGGCCAATCACGCAAGCAGCTCAGACAATGCATCTTCTAAAGCCT
TTTGGAAAAAATTTTGGAAGCTGAATTTAATTCCTAGAGCAAAATTGAGTGCAAGGAGGAAACTAATTCCCACGTCCTATGGGAATGGGATAATGGCAAGATTGGAGGAA
GGTGATCTCAATAAAGCCGCAGTGATTGTGTGGAACATTTGGAATTACAGAAACAAGATTTTATCTTCGGAGAACACAGCAGGTCAGAAGCAGATTCACAGATTCATTGG
ATCCAGCATAGATGATCTTTCAAAGGTTAGAAATGCTAACCTGGAAGATAAAAGGCTGAAGAGTCTGAGGAGTCAAGAATCATGGTCTCCTCCTCCCATCCCGTCCCTCA
AATTGAATGTCGATGCGTCTTGGAGCAGCGCTAAAGGTGCGGGTGGTGTTGGCTGGATTGTTCGTGACTCCTCGGGGTCTTTGGTTGCTGCAGGAAGCAAAAAGATCACG
GATAAGTGGCCAATAATAGCTCTCGAAGCTTTGGCTATTAAGGAAGGTTTATCTATGTACCTGAAGAACGAGGCATGCAAATCTATCCCCTTGATTGTTGAGTCGGATTC
GCTGACTCTTATCAAAGCAATCCAGGGGGAAGAAACCGATCTCTCGGAGGCAAGAAACATCGTGGAAGAAATCGAGGATCTGGCGAGAGAGGCGGCGAAAATTTCTTTCA
ATTGGAGTCCGAGGAGTTGCAATCGGGCATCGCTTGCTTTAGCCAATGATGCTAGATCAATCAGATCGTTACTCTCTCCTTCGGGAGATTTTTCTGTTGTTAATCCTGGT
TTTGTGTATCTGTTGAACTTCTCTTCCCAGTTGGAGGAAGATTATTTTTTTGGCAAATCGTGTTTGCCGAGTTGGTTGTCCTCGATTTTAGACGAGGATAAAAGATGTAT
TGTTGGGAGGAGGACTTTCCGTTGGCGCCGTCCGGAGAGGGAGGAGAAGATCGATGTCGCTGCAGTCCGTGCACTGTCGCGTGAGGTGTTGCCGTGA
mRNA sequenceShow/hide mRNA sequence
ATGACCATTCATTTATTTCCAAGAAGAGAGATTAGGGCTTTAAGAAAAGCAAAAGGAAGTGAAGAAAGCCTATTAGCCACAGTTCTAAGGGGCAGATACTACAAGGATAA
AGATTTTCTCAAAGCCCCCTTAGAAAATAACCCGTCCCTGACATGGCGTAGCATTGTGTGGGGTCGAGAGCTTTTCTCCAGAGGATACAGGTGGAAGGTTGGCAATGGAA
ATCATATAAGAATTAGGGATGACCCGTGGCTGAAAAGAAAAGGAAACAGGTCCCCTATCCCCCCTGAGGGGCAGCTGCAAAGGGAGAGAGTCTGCAATCTGATAAAAGAG
GATGGCAAATGGAACGAAAGGCTTGTCAAGGAGTTGTTCTCGCCGGAGGATGCAGAGGAAATTCTTAATATTCCTCTAGGTAGCAGAAAGGCCAAGGATGAAATTATTTG
GGCTGAGCATCCGAAGGGGGTTTTTTCAGTAAAATCAGCTTGTCAGCTAGCTACTAGCATAGAGGAGGCCAATCACGCAAGCAGCTCAGACAATGCATCTTCTAAAGCCT
TTTGGAAAAAATTTTGGAAGCTGAATTTAATTCCTAGAGCAAAATTGAGTGCAAGGAGGAAACTAATTCCCACGTCCTATGGGAATGGGATAATGGCAAGATTGGAGGAA
GGTGATCTCAATAAAGCCGCAGTGATTGTGTGGAACATTTGGAATTACAGAAACAAGATTTTATCTTCGGAGAACACAGCAGGTCAGAAGCAGATTCACAGATTCATTGG
ATCCAGCATAGATGATCTTTCAAAGGTTAGAAATGCTAACCTGGAAGATAAAAGGCTGAAGAGTCTGAGGAGTCAAGAATCATGGTCTCCTCCTCCCATCCCGTCCCTCA
AATTGAATGTCGATGCGTCTTGGAGCAGCGCTAAAGGTGCGGGTGGTGTTGGCTGGATTGTTCGTGACTCCTCGGGGTCTTTGGTTGCTGCAGGAAGCAAAAAGATCACG
GATAAGTGGCCAATAATAGCTCTCGAAGCTTTGGCTATTAAGGAAGGTTTATCTATGTACCTGAAGAACGAGGCATGCAAATCTATCCCCTTGATTGTTGAGTCGGATTC
GCTGACTCTTATCAAAGCAATCCAGGGGGAAGAAACCGATCTCTCGGAGGCAAGAAACATCGTGGAAGAAATCGAGGATCTGGCGAGAGAGGCGGCGAAAATTTCTTTCA
ATTGGAGTCCGAGGAGTTGCAATCGGGCATCGCTTGCTTTAGCCAATGATGCTAGATCAATCAGATCGTTACTCTCTCCTTCGGGAGATTTTTCTGTTGTTAATCCTGGT
TTTGTGTATCTGTTGAACTTCTCTTCCCAGTTGGAGGAAGATTATTTTTTTGGCAAATCGTGTTTGCCGAGTTGGTTGTCCTCGATTTTAGACGAGGATAAAAGATGTAT
TGTTGGGAGGAGGACTTTCCGTTGGCGCCGTCCGGAGAGGGAGGAGAAGATCGATGTCGCTGCAGTCCGTGCACTGTCGCGTGAGGTGTTGCCGTGA
Protein sequenceShow/hide protein sequence
MTIHLFPRREIRALRKAKGSEESLLATVLRGRYYKDKDFLKAPLENNPSLTWRSIVWGRELFSRGYRWKVGNGNHIRIRDDPWLKRKGNRSPIPPEGQLQRERVCNLIKE
DGKWNERLVKELFSPEDAEEILNIPLGSRKAKDEIIWAEHPKGVFSVKSACQLATSIEEANHASSSDNASSKAFWKKFWKLNLIPRAKLSARRKLIPTSYGNGIMARLEE
GDLNKAAVIVWNIWNYRNKILSSENTAGQKQIHRFIGSSIDDLSKVRNANLEDKRLKSLRSQESWSPPPIPSLKLNVDASWSSAKGAGGVGWIVRDSSGSLVAAGSKKIT
DKWPIIALEALAIKEGLSMYLKNEACKSIPLIVESDSLTLIKAIQGEETDLSEARNIVEEIEDLAREAAKISFNWSPRSCNRASLALANDARSIRSLLSPSGDFSVVNPG
FVYLLNFSSQLEEDYFFGKSCLPSWLSSILDEDKRCIVGRRTFRWRRPEREEKIDVAAVRALSREVLP