CuGenDBv2

Gene ID	Spg028546
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	ARM repeat superfamily protein
Genome location	scaffold7:11160532..11163692
RNA-Seq Expression	Spg028546
Synteny	Spg028546
Gene Ontology terms	GO:0016021 - integral component of membrane (cellular component)
InterPro domains	IPR011989 - Armadillo-like helical IPR016024 - Armadillo-type fold

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

XP_004146451.1 uncharacterized protein LOC101212969 isoform X1 [Cucumis sativus]

6.8e-91

90.45

Show/hide

Query:  MRIIASKLATFQHLCRREPARTLQFRPFSVYDERGLIEIELISEIEKEAERKVGWLLKLIFAGTATFLGYHIFPYMGDNLLQQSVALLQVKDPLFKRMGA
        MRIIASKL TFQHLCRREP RTLQFR FS YDER         EIEKEAERKVGWLLKLIFAGTATFLGY IFPYMGDNLLQQSV+LL+VKDPLFKRMGA
Subjt:  MRIIASKLATFQHLCRREPARTLQFRPFSVYDERGLIEIELISEIEKEAERKVGWLLKLIFAGTATFLGYHIFPYMGDNLLQQSVALLQVKDPLFKRMGA

Query:  SRLARFSIDDERRMKIVEIGGAQELLNMLGAAKDDRTRKEALKALHAISHSDEAVDALHKAGAILVIKSTPDSAEDMKVNEYKSNLMKRFRDLRYDVSS
        SRLARFSIDDE+RMKIVEIGGAQELLNMLGAAKDDRTRKEALKALHAISHSDEA  ALHKAGAILVIKSTPDSAEDMKVNEYKSNLMKRFRDLRYDVSS
Subjt:  SRLARFSIDDERRMKIVEIGGAQELLNMLGAAKDDRTRKEALKALHAISHSDEAVDALHKAGAILVIKSTPDSAEDMKVNEYKSNLMKRFRDLRYDVSS

XP_022941867.1 uncharacterized protein LOC111447100 isoform X1 [Cucurbita moschata]

3.0e-91

90.45

Show/hide

Query:  MRIIASKLATFQHLCRREPARTLQFRPFSVYDERGLIEIELISEIEKEAERKVGWLLKLIFAGTATFLGYHIFPYMGDNLLQQSVALLQVKDPLFKRMGA
        MRII SKL  FQHLCRREPARTLQFRPFS YDER         EIEKEAERKVGWLLKLIFAGTATFLGYHIFPYMGDNLLQQSV+LLQVKDPLFKRMGA
Subjt:  MRIIASKLATFQHLCRREPARTLQFRPFSVYDERGLIEIELISEIEKEAERKVGWLLKLIFAGTATFLGYHIFPYMGDNLLQQSVALLQVKDPLFKRMGA

Query:  SRLARFSIDDERRMKIVEIGGAQELLNMLGAAKDDRTRKEALKALHAISHSDEAVDALHKAGAILVIKSTPDSAEDMKVNEYKSNLMKRFRDLRYDVSS
        SRLARFSIDDE+RMKIVEIGGAQELLNMLGAAKDDRTRKEALKALHAISHSDEAV ALHKAGAILVIKSTPDSAED +VNEYKSNLMKRFRDL YDVSS
Subjt:  SRLARFSIDDERRMKIVEIGGAQELLNMLGAAKDDRTRKEALKALHAISHSDEAVDALHKAGAILVIKSTPDSAEDMKVNEYKSNLMKRFRDLRYDVSS

XP_022996596.1 uncharacterized protein LOC111491787 isoform X1 [Cucurbita maxima]

1.5e-90

89.95

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Query:  MRIIASKLATFQHLCRREPARTLQFRPFSVYDERGLIEIELISEIEKEAERKVGWLLKLIFAGTATFLGYHIFPYMGDNLLQQSVALLQVKDPLFKRMGA
        MRII SKL  FQHLCRREPARTLQFRPFS YDER         EIEKEAERKVGWLLKLIFAGTATFLGYHIFPYMGDNLLQQSV+LLQVKDPLFKRMGA
Subjt:  MRIIASKLATFQHLCRREPARTLQFRPFSVYDERGLIEIELISEIEKEAERKVGWLLKLIFAGTATFLGYHIFPYMGDNLLQQSVALLQVKDPLFKRMGA

Query:  SRLARFSIDDERRMKIVEIGGAQELLNMLGAAKDDRTRKEALKALHAISHSDEAVDALHKAGAILVIKSTPDSAEDMKVNEYKSNLMKRFRDLRYDVSS
        SRLARFSIDDE+RMKIVEIGGAQELLNMLGAAKDDRTRKEALKALHAIS+SDEAV ALHKAGAILVIKSTPDSAED +VNEYKSNLMKRFRDL YDVSS
Subjt:  SRLARFSIDDERRMKIVEIGGAQELLNMLGAAKDDRTRKEALKALHAISHSDEAVDALHKAGAILVIKSTPDSAEDMKVNEYKSNLMKRFRDLRYDVSS

XP_023526974.1 uncharacterized protein LOC111790336 isoform X1 [Cucurbita pepo subsp. pepo]

6.1e-92

90.95

Show/hide

Query:  MRIIASKLATFQHLCRREPARTLQFRPFSVYDERGLIEIELISEIEKEAERKVGWLLKLIFAGTATFLGYHIFPYMGDNLLQQSVALLQVKDPLFKRMGA
        MRII SKL  FQHLCRREPARTLQFRPFS YDER         EIEKEAERKVGWLLKLIFAGTATFLGYHIFPYMGDNLLQQSV+LLQVKDPLFKRMGA
Subjt:  MRIIASKLATFQHLCRREPARTLQFRPFSVYDERGLIEIELISEIEKEAERKVGWLLKLIFAGTATFLGYHIFPYMGDNLLQQSVALLQVKDPLFKRMGA

Query:  SRLARFSIDDERRMKIVEIGGAQELLNMLGAAKDDRTRKEALKALHAISHSDEAVDALHKAGAILVIKSTPDSAEDMKVNEYKSNLMKRFRDLRYDVSS
        SRLARFSIDDE+RMKIVEIGGAQELLNMLGAAKDDRTRKEALKALHAISHSDEAV ALHKAGAILVIKSTPDSAEDM+VNEYKSNLMKRFRDL YDVSS
Subjt:  SRLARFSIDDERRMKIVEIGGAQELLNMLGAAKDDRTRKEALKALHAISHSDEAVDALHKAGAILVIKSTPDSAEDMKVNEYKSNLMKRFRDLRYDVSS

XP_023526983.1 uncharacterized protein LOC111790336 isoform X2 [Cucurbita pepo subsp. pepo]

3.7e-89

89.95

Show/hide

Query:  MRIIASKLATFQHLCRREPARTLQFRPFSVYDERGLIEIELISEIEKEAERKVGWLLKLIFAGTATFLGYHIFPYMGDNLLQQSVALLQVKDPLFKRMGA
        MRII SKL    HLCRREPARTLQFRPFS YDER         EIEKEAERKVGWLLKLIFAGTATFLGYHIFPYMGDNLLQQSV+LLQVKDPLFKRMGA
Subjt:  MRIIASKLATFQHLCRREPARTLQFRPFSVYDERGLIEIELISEIEKEAERKVGWLLKLIFAGTATFLGYHIFPYMGDNLLQQSVALLQVKDPLFKRMGA

Query:  SRLARFSIDDERRMKIVEIGGAQELLNMLGAAKDDRTRKEALKALHAISHSDEAVDALHKAGAILVIKSTPDSAEDMKVNEYKSNLMKRFRDLRYDVSS
        SRLARFSIDDE+RMKIVEIGGAQELLNMLGAAKDDRTRKEALKALHAISHSDEAV ALHKAGAILVIKSTPDSAEDM+VNEYKSNLMKRFRDL YDVSS
Subjt:  SRLARFSIDDERRMKIVEIGGAQELLNMLGAAKDDRTRKEALKALHAISHSDEAVDALHKAGAILVIKSTPDSAEDMKVNEYKSNLMKRFRDLRYDVSS

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KM85 Uncharacterized protein

2.0e-88

89.45

Show/hide

Query:  MRIIASKLATFQHLCRREPARTLQFRPFSVYDERGLIEIELISEIEKEAERKVGWLLKLIFAGTATFLGYHIFPYMGDNLLQQSVALLQVKDPLFKRMGA
        MRIIASKL T  HLCRREP RTLQFR FS YDER         EIEKEAERKVGWLLKLIFAGTATFLGY IFPYMGDNLLQQSV+LL+VKDPLFKRMGA
Subjt:  MRIIASKLATFQHLCRREPARTLQFRPFSVYDERGLIEIELISEIEKEAERKVGWLLKLIFAGTATFLGYHIFPYMGDNLLQQSVALLQVKDPLFKRMGA

Query:  SRLARFSIDDERRMKIVEIGGAQELLNMLGAAKDDRTRKEALKALHAISHSDEAVDALHKAGAILVIKSTPDSAEDMKVNEYKSNLMKRFRDLRYDVSS
        SRLARFSIDDE+RMKIVEIGGAQELLNMLGAAKDDRTRKEALKALHAISHSDEA  ALHKAGAILVIKSTPDSAEDMKVNEYKSNLMKRFRDLRYDVSS
Subjt:  SRLARFSIDDERRMKIVEIGGAQELLNMLGAAKDDRTRKEALKALHAISHSDEAVDALHKAGAILVIKSTPDSAEDMKVNEYKSNLMKRFRDLRYDVSS

A0A6J1FNN3 uncharacterized protein LOC111447100 isoform X1

1.5e-91

90.45

Show/hide

Query:  MRIIASKLATFQHLCRREPARTLQFRPFSVYDERGLIEIELISEIEKEAERKVGWLLKLIFAGTATFLGYHIFPYMGDNLLQQSVALLQVKDPLFKRMGA
        MRII SKL  FQHLCRREPARTLQFRPFS YDER         EIEKEAERKVGWLLKLIFAGTATFLGYHIFPYMGDNLLQQSV+LLQVKDPLFKRMGA
Subjt:  MRIIASKLATFQHLCRREPARTLQFRPFSVYDERGLIEIELISEIEKEAERKVGWLLKLIFAGTATFLGYHIFPYMGDNLLQQSVALLQVKDPLFKRMGA

Query:  SRLARFSIDDERRMKIVEIGGAQELLNMLGAAKDDRTRKEALKALHAISHSDEAVDALHKAGAILVIKSTPDSAEDMKVNEYKSNLMKRFRDLRYDVSS
        SRLARFSIDDE+RMKIVEIGGAQELLNMLGAAKDDRTRKEALKALHAISHSDEAV ALHKAGAILVIKSTPDSAED +VNEYKSNLMKRFRDL YDVSS
Subjt:  SRLARFSIDDERRMKIVEIGGAQELLNMLGAAKDDRTRKEALKALHAISHSDEAVDALHKAGAILVIKSTPDSAEDMKVNEYKSNLMKRFRDLRYDVSS

A0A6J1FTA5 uncharacterized protein LOC111447100 isoform X2

8.9e-89

89.45

Show/hide

Query:  MRIIASKLATFQHLCRREPARTLQFRPFSVYDERGLIEIELISEIEKEAERKVGWLLKLIFAGTATFLGYHIFPYMGDNLLQQSVALLQVKDPLFKRMGA
        MRII SKL    HLCRREPARTLQFRPFS YDER         EIEKEAERKVGWLLKLIFAGTATFLGYHIFPYMGDNLLQQSV+LLQVKDPLFKRMGA
Subjt:  MRIIASKLATFQHLCRREPARTLQFRPFSVYDERGLIEIELISEIEKEAERKVGWLLKLIFAGTATFLGYHIFPYMGDNLLQQSVALLQVKDPLFKRMGA

Query:  SRLARFSIDDERRMKIVEIGGAQELLNMLGAAKDDRTRKEALKALHAISHSDEAVDALHKAGAILVIKSTPDSAEDMKVNEYKSNLMKRFRDLRYDVSS
        SRLARFSIDDE+RMKIVEIGGAQELLNMLGAAKDDRTRKEALKALHAISHSDEAV ALHKAGAILVIKSTPDSAED +VNEYKSNLMKRFRDL YDVSS
Subjt:  SRLARFSIDDERRMKIVEIGGAQELLNMLGAAKDDRTRKEALKALHAISHSDEAVDALHKAGAILVIKSTPDSAEDMKVNEYKSNLMKRFRDLRYDVSS

A0A6J1K583 uncharacterized protein LOC111491787 isoform X1

7.3e-91

89.95

Show/hide

Query:  MRIIASKLATFQHLCRREPARTLQFRPFSVYDERGLIEIELISEIEKEAERKVGWLLKLIFAGTATFLGYHIFPYMGDNLLQQSVALLQVKDPLFKRMGA
        MRII SKL  FQHLCRREPARTLQFRPFS YDER         EIEKEAERKVGWLLKLIFAGTATFLGYHIFPYMGDNLLQQSV+LLQVKDPLFKRMGA
Subjt:  MRIIASKLATFQHLCRREPARTLQFRPFSVYDERGLIEIELISEIEKEAERKVGWLLKLIFAGTATFLGYHIFPYMGDNLLQQSVALLQVKDPLFKRMGA

Query:  SRLARFSIDDERRMKIVEIGGAQELLNMLGAAKDDRTRKEALKALHAISHSDEAVDALHKAGAILVIKSTPDSAEDMKVNEYKSNLMKRFRDLRYDVSS
        SRLARFSIDDE+RMKIVEIGGAQELLNMLGAAKDDRTRKEALKALHAIS+SDEAV ALHKAGAILVIKSTPDSAED +VNEYKSNLMKRFRDL YDVSS
Subjt:  SRLARFSIDDERRMKIVEIGGAQELLNMLGAAKDDRTRKEALKALHAISHSDEAVDALHKAGAILVIKSTPDSAEDMKVNEYKSNLMKRFRDLRYDVSS

A0A6J1K968 uncharacterized protein LOC111491787 isoform X2

4.4e-88

88.94

Show/hide

Query:  MRIIASKLATFQHLCRREPARTLQFRPFSVYDERGLIEIELISEIEKEAERKVGWLLKLIFAGTATFLGYHIFPYMGDNLLQQSVALLQVKDPLFKRMGA
        MRII SKL    HLCRREPARTLQFRPFS YDER         EIEKEAERKVGWLLKLIFAGTATFLGYHIFPYMGDNLLQQSV+LLQVKDPLFKRMGA
Subjt:  MRIIASKLATFQHLCRREPARTLQFRPFSVYDERGLIEIELISEIEKEAERKVGWLLKLIFAGTATFLGYHIFPYMGDNLLQQSVALLQVKDPLFKRMGA

Query:  SRLARFSIDDERRMKIVEIGGAQELLNMLGAAKDDRTRKEALKALHAISHSDEAVDALHKAGAILVIKSTPDSAEDMKVNEYKSNLMKRFRDLRYDVSS
        SRLARFSIDDE+RMKIVEIGGAQELLNMLGAAKDDRTRKEALKALHAIS+SDEAV ALHKAGAILVIKSTPDSAED +VNEYKSNLMKRFRDL YDVSS
Subjt:  SRLARFSIDDERRMKIVEIGGAQELLNMLGAAKDDRTRKEALKALHAISHSDEAVDALHKAGAILVIKSTPDSAEDMKVNEYKSNLMKRFRDLRYDVSS

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT3G56210.1 ARM repeat superfamily protein

1.7e-55

55.78

Show/hide

Query:  MRIIASKLATFQHLCRREPARTLQFRPFSVYDERGLIEIELISEIEKEAERKVGWLLKLIFAGTATFLGYHIFPYMGDNLLQQSVALLQVKDPLFKRMGA
        MRI+ +++A   H CR   A   + R FS  +++  +       +E+EAERK+GW LK+ FAGTAT++GY  FPY+GDNL+ QS++LL VKDPLFKRMGA
Subjt:  MRIIASKLATFQHLCRREPARTLQFRPFSVYDERGLIEIELISEIEKEAERKVGWLLKLIFAGTATFLGYHIFPYMGDNLLQQSVALLQVKDPLFKRMGA

Query:  SRLARFSIDDERRMKIVEIGGAQELLNMLGAAKDDRTRKEALKALHAISHSDEAVDALHKAGAILVIKSTPDSAEDMKVNEYKSNLMKRFRDLRYDVSS
        SRL+RF+IDDERRMK+VE+GGAQELL+MLG+AKDD+TRKEALKAL A+S S EA   L   GA+ ++KSTP+S ED  ++ YKSN++++  +    VSS
Subjt:  SRLARFSIDDERRMKIVEIGGAQELLNMLGAAKDDRTRKEALKALHAISHSDEAVDALHKAGAILVIKSTPDSAEDMKVNEYKSNLMKRFRDLRYDVSS

AT3G56210.2 ARM repeat superfamily protein

1.7e-55

55.78

Show/hide

Query:  MRIIASKLATFQHLCRREPARTLQFRPFSVYDERGLIEIELISEIEKEAERKVGWLLKLIFAGTATFLGYHIFPYMGDNLLQQSVALLQVKDPLFKRMGA
        MRI+ +++A   H CR   A   + R FS  +++  +       +E+EAERK+GW LK+ FAGTAT++GY  FPY+GDNL+ QS++LL VKDPLFKRMGA
Subjt:  MRIIASKLATFQHLCRREPARTLQFRPFSVYDERGLIEIELISEIEKEAERKVGWLLKLIFAGTATFLGYHIFPYMGDNLLQQSVALLQVKDPLFKRMGA

Query:  SRLARFSIDDERRMKIVEIGGAQELLNMLGAAKDDRTRKEALKALHAISHSDEAVDALHKAGAILVIKSTPDSAEDMKVNEYKSNLMKRFRDLRYDVSS
        SRL+RF+IDDERRMK+VE+GGAQELL+MLG+AKDD+TRKEALKAL A+S S EA   L   GA+ ++KSTP+S ED  ++ YKSN++++  +    VSS
Subjt:  SRLARFSIDDERRMKIVEIGGAQELLNMLGAAKDDRTRKEALKALHAISHSDEAVDALHKAGAILVIKSTPDSAEDMKVNEYKSNLMKRFRDLRYDVSS

AT3G56210.4 ARM repeat superfamily protein

1.7e-55

55.78

Show/hide

Query:  MRIIASKLATFQHLCRREPARTLQFRPFSVYDERGLIEIELISEIEKEAERKVGWLLKLIFAGTATFLGYHIFPYMGDNLLQQSVALLQVKDPLFKRMGA
        MRI+ +++A   H CR   A   + R FS  +++  +       +E+EAERK+GW LK+ FAGTAT++GY  FPY+GDNL+ QS++LL VKDPLFKRMGA
Subjt:  MRIIASKLATFQHLCRREPARTLQFRPFSVYDERGLIEIELISEIEKEAERKVGWLLKLIFAGTATFLGYHIFPYMGDNLLQQSVALLQVKDPLFKRMGA

Query:  SRLARFSIDDERRMKIVEIGGAQELLNMLGAAKDDRTRKEALKALHAISHSDEAVDALHKAGAILVIKSTPDSAEDMKVNEYKSNLMKRFRDLRYDVSS
        SRL+RF+IDDERRMK+VE+GGAQELL+MLG+AKDD+TRKEALKAL A+S S EA   L   GA+ ++KSTP+S ED  ++ YKSN++++  +    VSS
Subjt:  SRLARFSIDDERRMKIVEIGGAQELLNMLGAAKDDRTRKEALKALHAISHSDEAVDALHKAGAILVIKSTPDSAEDMKVNEYKSNLMKRFRDLRYDVSS

AT3G56210.5 ARM repeat superfamily protein

5.4e-54

55.22

Show/hide

Query:  MRIIASKLATFQHLCRREPARTLQFRPFSVYDERGLIEIELISEIEKEAERKVGWLLKLIFAGTATFLGYHIFPYMGDNLLQQSVALLQVKDPLFKRMGA
        MRI+ +++A   H CR   A   + R FS  +++  +       +E+EAERK+GW LK+ FAGTAT++GY  FPY+GDNL+ QS++LL VKDPLFKRMGA
Subjt:  MRIIASKLATFQHLCRREPARTLQFRPFSVYDERGLIEIELISEIEKEAERKVGWLLKLIFAGTATFLGYHIFPYMGDNLLQQSVALLQVKDPLFKRMGA

Query:  SRLARFSIDDERRMKIVEIGGAQELLNMLGAAKDDRTRKEALKALHAISHS--DEAVDALHKAGAILVIKSTPDSAEDMKVNEYKSNLMKRFRDLRYDVS
        SRL+RF+IDDERRMK+VE+GGAQELL+MLG+AKDD+TRKEALKAL A+S S   EA   L   GA+ ++KSTP+S ED  ++ YKSN++++  +    VS
Subjt:  SRLARFSIDDERRMKIVEIGGAQELLNMLGAAKDDRTRKEALKALHAISHS--DEAVDALHKAGAILVIKSTPDSAEDMKVNEYKSNLMKRFRDLRYDVS

Query:  S
        S
Subjt:  S

Sequences

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CDS sequence

Show/hide CDS sequence

ATGCGCATAATTGCATCGAAGCTAGCCACTTTTCAGCATCTGTGCAGAAGGGAACCTGCGCGGACCCTGCAATTTCGCCCCTTTTCAGTTTACGATGAAAGAGGCCTGAT
TGAGATTGAGTTAATTTCAGAAATCGAGAAGGAGGCTGAAAGAAAAGTAGGATGGTTATTAAAACTAATCTTTGCTGGGACTGCGACATTTCTGGGTTACCATATTTTTC
CATACATGGGGGATAACTTGTTGCAGCAATCTGTGGCGCTCTTGCAAGTCAAGGATCCACTGTTTAAGAGGATGGGAGCATCTAGATTGGCTCGCTTTTCGATTGATGAT
GAAAGAAGGATGAAAATAGTGGAGATAGGTGGGGCTCAAGAGCTCTTAAACATGCTCGGGGCTGCCAAAGACGATCGTACACGTAAGGAAGCTTTGAAGGCTTTACACGC
CATCTCACATTCAGATGAAGCTGTTGATGCCTTGCATAAAGCAGGGGCAATCTTGGTTATTAAATCTACCCCGGATTCGGCTGAAGATATGAAAGTGAATGAGTACAAGT
CAAACCTAATGAAGAGATTTAGAGATCTGAGATATGATGTTTCATCTTGA

mRNA sequence

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Protein sequence

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MRIIASKLATFQHLCRREPARTLQFRPFSVYDERGLIEIELISEIEKEAERKVGWLLKLIFAGTATFLGYHIFPYMGDNLLQQSVALLQVKDPLFKRMGASRLARFSIDD
ERRMKIVEIGGAQELLNMLGAAKDDRTRKEALKALHAISHSDEAVDALHKAGAILVIKSTPDSAEDMKVNEYKSNLMKRFRDLRYDVSS

Spg028546 (gene) of Sponge gourd (cylindrica) v1 genome