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Spg028552 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg028552
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
Description60S ribosomal protein L11
Genome locationscaffold7:15052314..15060517
RNA-Seq ExpressionSpg028552
SyntenySpg028552
Gene Ontology termsGO:0006412 - translation (biological process)
GO:0022625 - cytosolic large ribosomal subunit (cellular component)
GO:0003723 - RNA binding (molecular function)
GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domainsIPR002132 - Ribosomal protein L5


Homology Show/hide homology
GenBank top hitse value%identityAlignment
GEV60664.1 60S ribosomal protein L11 [Tanacetum cinerariifolium]2.0e-0766.04Show/hide
Query:  EKAMQLLESGLKVTEYELLRRNFSDTGCFDFA---EEDIGIDIFYGVGVGNMD
        +KAMQLLESGLK+ EYELLRRNFSDTGCFDF    + D+GI      GV  MD
Subjt:  EKAMQLLESGLKVTEYELLRRNFSDTGCFDFA---EEDIGIDIFYGVGVGNMD

KAG5243721.1 60S ribosomal protein [Salix suchowensis]6.8e-0848.1Show/hide
Query:  EKAMQLLESGLKVTEYELLRRNFSDTGCFDFAEE---DIGIDIFYGVGVGNMDGALRICPEEFYPYLRQSLVGIKTFCR
        +KAMQLLESGLKV EYELLRRNFSDTGCF F  +   D+GI      G+  MD         FY ++R+ ++ +   C+
Subjt:  EKAMQLLESGLKVTEYELLRRNFSDTGCFDFAEE---DIGIDIFYGVGVGNMDGALRICPEEFYPYLRQSLVGIKTFCR

VDC60185.1 unnamed protein product [Brassica rapa]1.8e-0857.58Show/hide
Query:  EKAMQLLESGLKVTEYELLRRNFSDTGCFDFAEEDIGIDIFYGVGVGNMDGALRICPEEFYPYLRQ
        +KAMQLLESGLKV EYELLRRNFSDTGCF F  + I  D F G G+   D +  I   +FY  L +
Subjt:  EKAMQLLESGLKVTEYELLRRNFSDTGCFDFAEEDIGIDIFYGVGVGNMDGALRICPEEFYPYLRQ

VDC90723.1 unnamed protein product [Brassica rapa]2.6e-0759.09Show/hide
Query:  EKAMQLLESGLKVTEYELLRRNFSDTGCFDFAEEDIGIDIFYGVGVGNMDGALRICPEEFYPYLRQ
        +KAMQLLESGLKV EYELLRRNFSDTGCF F  E I  D F G   G  D +  I   +FY  L +
Subjt:  EKAMQLLESGLKVTEYELLRRNFSDTGCFDFAEEDIGIDIFYGVGVGNMDGALRICPEEFYPYLRQ

XP_021306147.1 60S ribosomal protein L11 [Sorghum bicolor]4.4e-0749.37Show/hide
Query:  EKAMQLLESGLKVTEYELLRRNFSDTGCFDFAEE---DIGIDIFYGVGVGNMDGALRICPEEFYPYLRQSLVGIKTFCR
        EKAMQLLESGLKV EYELLRRNFS+TGCF F  +   D+GI      G+  MD         FY  L ++   +   CR
Subjt:  EKAMQLLESGLKVTEYELLRRNFSDTGCFDFAEE---DIGIDIFYGVGVGNMDGALRICPEEFYPYLRQSLVGIKTFCR

TrEMBL top hitse value%identityAlignment
A0A194YJK4 Uncharacterized protein2.1e-0749.37Show/hide
Query:  EKAMQLLESGLKVTEYELLRRNFSDTGCFDFAEE---DIGIDIFYGVGVGNMDGALRICPEEFYPYLRQSLVGIKTFCR
        EKAMQLLESGLKV EYELLRRNFS+TGCF F  +   D+GI      G+  MD         FY  L ++   +   CR
Subjt:  EKAMQLLESGLKVTEYELLRRNFSDTGCFDFAEE---DIGIDIFYGVGVGNMDGALRICPEEFYPYLRQSLVGIKTFCR

A0A1U7YW84 60S ribosomal protein L11-1-like2.1e-0764.15Show/hide
Query:  EKAMQLLESGLKVTEYELLRRNFSDTGCFDFAEE---DIGIDIFYGVGVGNMD
        EKA QLLESGLKV EYELLRRNFSDTGCF F+ +   D+GI+    +G+  MD
Subjt:  EKAMQLLESGLKVTEYELLRRNFSDTGCFDFAEE---DIGIDIFYGVGVGNMD

A0A3P5YBW7 Uncharacterized protein8.7e-0957.58Show/hide
Query:  EKAMQLLESGLKVTEYELLRRNFSDTGCFDFAEEDIGIDIFYGVGVGNMDGALRICPEEFYPYLRQ
        +KAMQLLESGLKV EYELLRRNFSDTGCF F  + I  D F G G+   D +  I   +FY  L +
Subjt:  EKAMQLLESGLKVTEYELLRRNFSDTGCFDFAEEDIGIDIFYGVGVGNMDGALRICPEEFYPYLRQ

A0A3P6ASP0 Uncharacterized protein1.3e-0759.09Show/hide
Query:  EKAMQLLESGLKVTEYELLRRNFSDTGCFDFAEEDIGIDIFYGVGVGNMDGALRICPEEFYPYLRQ
        +KAMQLLESGLKV EYELLRRNFSDTGCF F  E I  D F G   G  D +  I   +FY  L +
Subjt:  EKAMQLLESGLKVTEYELLRRNFSDTGCFDFAEEDIGIDIFYGVGVGNMDGALRICPEEFYPYLRQ

M4DM59 Uncharacterized protein8.7e-0957.58Show/hide
Query:  EKAMQLLESGLKVTEYELLRRNFSDTGCFDFAEEDIGIDIFYGVGVGNMDGALRICPEEFYPYLRQ
        +KAMQLLESGLKV EYELLRRNFSDTGCF F  + I  D F G G+   D +  I   +FY  L +
Subjt:  EKAMQLLESGLKVTEYELLRRNFSDTGCFDFAEEDIGIDIFYGVGVGNMDGALRICPEEFYPYLRQ

SwissProt top hitse value%identityAlignment
A2YDY2 60S ribosomal protein L112.2e-0964.15Show/hide
Query:  EKAMQLLESGLKVTEYELLRRNFSDTGCFDFAEE---DIGIDIFYGVGVGNMD
        EKAMQLLESGLKV EYELLRRNFS+TGCF F  +   D+GI      G+  MD
Subjt:  EKAMQLLESGLKVTEYELLRRNFSDTGCFDFAEE---DIGIDIFYGVGVGNMD

P42794 60S ribosomal protein L11-27.6e-1066.04Show/hide
Query:  EKAMQLLESGLKVTEYELLRRNFSDTGCFDFAEE---DIGIDIFYGVGVGNMD
        EKAMQLLESGLKV EYELLRRNFSDTGCF F  +   D+GI      G+  MD
Subjt:  EKAMQLLESGLKVTEYELLRRNFSDTGCFDFAEE---DIGIDIFYGVGVGNMD

P42795 60S ribosomal protein L11-17.6e-1066.04Show/hide
Query:  EKAMQLLESGLKVTEYELLRRNFSDTGCFDFAEE---DIGIDIFYGVGVGNMD
        EKAMQLLESGLKV EYELLRRNFSDTGCF F  +   D+GI      G+  MD
Subjt:  EKAMQLLESGLKVTEYELLRRNFSDTGCFDFAEE---DIGIDIFYGVGVGNMD

P46287 60S ribosomal protein L111.7e-0964.15Show/hide
Query:  EKAMQLLESGLKVTEYELLRRNFSDTGCFDFAEE---DIGIDIFYGVGVGNMD
        +KAMQLLESGLKV EYELLRRNFSDTGCF F  +   D+GI      G+  MD
Subjt:  EKAMQLLESGLKVTEYELLRRNFSDTGCFDFAEE---DIGIDIFYGVGVGNMD

Q0DK10 60S ribosomal protein L112.2e-0964.15Show/hide
Query:  EKAMQLLESGLKVTEYELLRRNFSDTGCFDFAEE---DIGIDIFYGVGVGNMD
        EKAMQLLESGLKV EYELLRRNFS+TGCF F  +   D+GI      G+  MD
Subjt:  EKAMQLLESGLKVTEYELLRRNFSDTGCFDFAEE---DIGIDIFYGVGVGNMD

Arabidopsis top hitse value%identityAlignment
AT2G42740.1 ribosomal protein large subunit 16A5.4e-1166.04Show/hide
Query:  EKAMQLLESGLKVTEYELLRRNFSDTGCFDFAEE---DIGIDIFYGVGVGNMD
        EKAMQLLESGLKV EYELLRRNFSDTGCF F  +   D+GI      G+  MD
Subjt:  EKAMQLLESGLKVTEYELLRRNFSDTGCFDFAEE---DIGIDIFYGVGVGNMD

AT3G58700.1 Ribosomal L5P family protein5.4e-1166.04Show/hide
Query:  EKAMQLLESGLKVTEYELLRRNFSDTGCFDFAEE---DIGIDIFYGVGVGNMD
        EKAMQLLESGLKV EYELLRRNFSDTGCF F  +   D+GI      G+  MD
Subjt:  EKAMQLLESGLKVTEYELLRRNFSDTGCFDFAEE---DIGIDIFYGVGVGNMD

AT4G18730.1 ribosomal protein L16B5.4e-1166.04Show/hide
Query:  EKAMQLLESGLKVTEYELLRRNFSDTGCFDFAEE---DIGIDIFYGVGVGNMD
        EKAMQLLESGLKV EYELLRRNFSDTGCF F  +   D+GI      G+  MD
Subjt:  EKAMQLLESGLKVTEYELLRRNFSDTGCFDFAEE---DIGIDIFYGVGVGNMD

AT5G45775.1 Ribosomal L5P family protein5.4e-1166.04Show/hide
Query:  EKAMQLLESGLKVTEYELLRRNFSDTGCFDFAEE---DIGIDIFYGVGVGNMD
        EKAMQLLESGLKV EYELLRRNFSDTGCF F  +   D+GI      G+  MD
Subjt:  EKAMQLLESGLKVTEYELLRRNFSDTGCFDFAEE---DIGIDIFYGVGVGNMD

AT5G45775.2 Ribosomal L5P family protein5.4e-1166.04Show/hide
Query:  EKAMQLLESGLKVTEYELLRRNFSDTGCFDFAEE---DIGIDIFYGVGVGNMD
        EKAMQLLESGLKV EYELLRRNFSDTGCF F  +   D+GI      G+  MD
Subjt:  EKAMQLLESGLKVTEYELLRRNFSDTGCFDFAEE---DIGIDIFYGVGVGNMD


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
CCATTAGGTCCCACTGGACTCTTGGGTGGGGTGAAAGACATCCCATTCATTCTCCTACTCTTAGAGAATTCCCATGAAGGCTCCGACCAGTCTCCTGCCTCTAGAAGTCT
CAGAGTCATACCGGTGGTTAATGGTTGCATGCGTAATAATCTATGTCGGAGTCGAGTCACAGAAATTTGCATAACGTTCACGTCTTCGGCCACTACTGAAGATCCACCTC
CGACGCTTTCTTCTCGCGATTTCCGACCTGCACGGGTCCTCGACGTTGGCGACACAGAAGCTGCTCATGAGGGGCGGTTTCAGGTGGGTTTTTCCGGTGTTTCGCGTGCA
ATAGGTTGTTCTTTCCTCTCGATATTTCGTGCTTTCTCGTTCTCCATCTCTCACTCTCTTTTTTCCAGCAAGATTCAGCCTTGCAAAGACTGTTTTTCGTGGGTTCCAAC
TGCTGTGTTGTTTAGGCGCGCGGACAACATTGTTTTCAGGTCGTTTGTGGCGTTTTTCCGACGATTTCAAGCGTGGGTCCCCTTTACTTTTGGAGGTTTAATTGTCGTTT
TGGAGCGGAATTGGGAGCTTGGACAGCAAGCGTTGTTTTTGTTTTTGCACTATAGTGATTGTGAGGCTAAGCATAGTAATATCCCTCGATTACGTTCTGCTCGAGAGCCA
CATAGACGATGCCCAACACCTCCGAACCGCCTGCACAAAAGAAGAAGATTCATCACCAGTACACCTCACCAACGACAGCAACAGGACATCCAGTTTGAACGACTTCTCGC
CTCCTTAGTCACAACCAAACCATCCTCCTCCTCACTCACAACAGGGACGATGCCCAACAACACCTCCGAACCTTCTGTGACCGACTGCACCAACCCCGTCGAAGAACCCA
CAACCTCGCTATCAGAGCACTCCAATGGAGCCTTTGAGGTCTTATCATCGTTTGCCTTTGTCACCTTATCACCTCTCCCATCGCCTCACTTGCGAATGCACAGGATTCTT
AATTGGGATTCAACGATTTTTGAAGCAGATTGTGAGAAGGCGATGCAACTTTTGGAAAGTGGGTTGAAGGTTACGGAGTATGAGTTGCTTCGCAGGAACTTCAGTGACAC
CGGATGCTTTGACTTTGCTGAAGAAGATATAGGGATTGATATTTTCTATGGAGTTGGGGTTGGGAACATGGATGGAGCTCTCAGGATCTGTCCTGAAGAGTTTTATCCCT
ATCTGCGACAATCTCTTGTGGGGATAAAAACTTTCTGTAGGATTGGGGATAAGGAGCCAGGGTAG
mRNA sequenceShow/hide mRNA sequence
CCATTAGGTCCCACTGGACTCTTGGGTGGGGTGAAAGACATCCCATTCATTCTCCTACTCTTAGAGAATTCCCATGAAGGCTCCGACCAGTCTCCTGCCTCTAGAAGTCT
CAGAGTCATACCGGTGGTTAATGGTTGCATGCGTAATAATCTATGTCGGAGTCGAGTCACAGAAATTTGCATAACGTTCACGTCTTCGGCCACTACTGAAGATCCACCTC
CGACGCTTTCTTCTCGCGATTTCCGACCTGCACGGGTCCTCGACGTTGGCGACACAGAAGCTGCTCATGAGGGGCGGTTTCAGGTGGGTTTTTCCGGTGTTTCGCGTGCA
ATAGGTTGTTCTTTCCTCTCGATATTTCGTGCTTTCTCGTTCTCCATCTCTCACTCTCTTTTTTCCAGCAAGATTCAGCCTTGCAAAGACTGTTTTTCGTGGGTTCCAAC
TGCTGTGTTGTTTAGGCGCGCGGACAACATTGTTTTCAGGTCGTTTGTGGCGTTTTTCCGACGATTTCAAGCGTGGGTCCCCTTTACTTTTGGAGGTTTAATTGTCGTTT
TGGAGCGGAATTGGGAGCTTGGACAGCAAGCGTTGTTTTTGTTTTTGCACTATAGTGATTGTGAGGCTAAGCATAGTAATATCCCTCGATTACGTTCTGCTCGAGAGCCA
CATAGACGATGCCCAACACCTCCGAACCGCCTGCACAAAAGAAGAAGATTCATCACCAGTACACCTCACCAACGACAGCAACAGGACATCCAGTTTGAACGACTTCTCGC
CTCCTTAGTCACAACCAAACCATCCTCCTCCTCACTCACAACAGGGACGATGCCCAACAACACCTCCGAACCTTCTGTGACCGACTGCACCAACCCCGTCGAAGAACCCA
CAACCTCGCTATCAGAGCACTCCAATGGAGCCTTTGAGGTCTTATCATCGTTTGCCTTTGTCACCTTATCACCTCTCCCATCGCCTCACTTGCGAATGCACAGGATTCTT
AATTGGGATTCAACGATTTTTGAAGCAGATTGTGAGAAGGCGATGCAACTTTTGGAAAGTGGGTTGAAGGTTACGGAGTATGAGTTGCTTCGCAGGAACTTCAGTGACAC
CGGATGCTTTGACTTTGCTGAAGAAGATATAGGGATTGATATTTTCTATGGAGTTGGGGTTGGGAACATGGATGGAGCTCTCAGGATCTGTCCTGAAGAGTTTTATCCCT
ATCTGCGACAATCTCTTGTGGGGATAAAAACTTTCTGTAGGATTGGGGATAAGGAGCCAGGGTAG
Protein sequenceShow/hide protein sequence
PLGPTGLLGGVKDIPFILLLLENSHEGSDQSPASRSLRVIPVVNGCMRNNLCRSRVTEICITFTSSATTEDPPPTLSSRDFRPARVLDVGDTEAAHEGRFQVGFSGVSRA
IGCSFLSIFRAFSFSISHSLFSSKIQPCKDCFSWVPTAVLFRRADNIVFRSFVAFFRRFQAWVPFTFGGLIVVLERNWELGQQALFLFLHYSDCEAKHSNIPRLRSAREP
HRRCPTPPNRLHKRRRFITSTPHQRQQQDIQFERLLASLVTTKPSSSSLTTGTMPNNTSEPSVTDCTNPVEEPTTSLSEHSNGAFEVLSSFAFVTLSPLPSPHLRMHRIL
NWDSTIFEADCEKAMQLLESGLKVTEYELLRRNFSDTGCFDFAEEDIGIDIFYGVGVGNMDGALRICPEEFYPYLRQSLVGIKTFCRIGDKEPG