; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg028572 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg028572
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionReverse transcriptase domain-containing protein
Genome locationscaffold7:12673510..12675822
RNA-Seq ExpressionSpg028572
SyntenySpg028572
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
MCH80834.1 hypothetical protein [Trifolium medium]1.6e-1532.69Show/hide
Query:  VAFSSACINNVYELRDVPDAEGNTLLNCLDDDFLNAVLLAVARPGAKWD--NHGAARTSKSQLLDFEATCWMHWVKNRIMPTTHDATLSLQRVVLVYCIM
        + +S+A INN Y L+   D E  TL++ + D+ L AV+  +  PG +W   N+      K   L  E   W   +K+ I+PTTH+ T++  R+VL++CIM
Subjt:  VAFSSACINNVYELRDVPDAEGNTLLNCLDDDFLNAVLLAVARPGAKWD--NHGAARTSKSQLLDFEATCWMHWVKNRIMPTTHDATLSLQRVVLVYCIM

Query:  KGIPLDLGKILVKTLRQTAAKPKGAMFCPGLVTRLCRASGLQPAADEEIRPMRKDF
        + IP+++G+I+ + +   + + +G ++ P L+T LC+A  ++  A +E  P  + F
Subjt:  KGIPLDLGKILVKTLRQTAAKPKGAMFCPGLVTRLCRASGLQPAADEEIRPMRKDF

PON35554.1 hypothetical protein PanWU01x14_335450, partial [Parasponia andersonii]1.1e-1331.75Show/hide
Query:  VAFSSACINNVYELRDVPDAEGNTLLNCLDDDFLNAVLLAVARPGAKWD-NHGAARTSKSQLLDFEATCWMHWVKNRIMPTTHDATLSLQRVVLVYCIMK
        V++S   IN V+ L D  D     + N  + D +  VL  VA  GA+W+ +   A T     L   A  W H++K+ ++PTTH  T+S  R++L++ ++ 
Subjt:  VAFSSACINNVYELRDVPDAEGNTLLNCLDDDFLNAVLLAVARPGAKWD-NHGAARTSKSQLLDFEATCWMHWVKNRIMPTTHDATLSLQRVVLVYCIMK

Query:  GIPLDLGKILVKTLRQTAAKPKGAMFCPGLVTRLCRASGLQPAADEEIRPMRKDFDDQWWTRVTRTRDMRLQGSTQQPAPASQPTAPAS
        G  +++G+++   +R  AA+  GA+F P L+TRLCR +      +EE      + D     R+T+        STQQP+ +   TA +S
Subjt:  GIPLDLGKILVKTLRQTAAKPKGAMFCPGLVTRLCRASGLQPAADEEIRPMRKDFDDQWWTRVTRTRDMRLQGSTQQPAPASQPTAPAS

PON46472.1 hypothetical protein PanWU01x14_251180, partial [Parasponia andersonii]1.5e-1331.75Show/hide
Query:  VAFSSACINNVYELRDVPDAEGNTLLNCLDDDFLNAVLLAVARPGAKWD-NHGAARTSKSQLLDFEATCWMHWVKNRIMPTTHDATLSLQRVVLVYCIMK
        V++S   IN V+ L D  D     + N    D +  VL  VA  GA+W+ +   A T     L   A  W H++K+R++PTTH  T+S  R++L++ ++ 
Subjt:  VAFSSACINNVYELRDVPDAEGNTLLNCLDDDFLNAVLLAVARPGAKWD-NHGAARTSKSQLLDFEATCWMHWVKNRIMPTTHDATLSLQRVVLVYCIMK

Query:  GIPLDLGKILVKTLRQTAAKPKGAMFCPGLVTRLCRASGLQPAADEEIRPMRKDFDDQWWTRVTRTRDMRLQGSTQQPAPASQPTAPAS
        G  +++G+++   +R  AA+  GA+F P L+TRLCR +      +EE      + D      V R        STQQP+ +   TA ++
Subjt:  GIPLDLGKILVKTLRQTAAKPKGAMFCPGLVTRLCRASGLQPAADEEIRPMRKDFDDQWWTRVTRTRDMRLQGSTQQPAPASQPTAPAS

PON62892.1 hypothetical protein PanWU01x14_135680 [Parasponia andersonii]1.9e-1335.56Show/hide
Query:  VAFSSACINNVYELRDVPDAEGNTLLNCLDDDFLNAVLLAVARPGAKWD-NHGAARTSKSQLLDFEATCWMHWVKNRIMPTTHDATLSLQRVVLVYCIMK
        V  S+  IN +Y L D P  E +  +  + +  L  VL  VA  GA+W+ +   A T     L+  A  W H++K+R++PTTH  T+S +RV+L+Y ++ 
Subjt:  VAFSSACINNVYELRDVPDAEGNTLLNCLDDDFLNAVLLAVARPGAKWD-NHGAARTSKSQLLDFEATCWMHWVKNRIMPTTHDATLSLQRVVLVYCIMK

Query:  GIPLDLGKILVKTLRQTAAKPKGAMFCPGLVTRLC
        G  +++G+I+ + +   AA+  GA+F P L+TR+C
Subjt:  GIPLDLGKILVKTLRQTAAKPKGAMFCPGLVTRLC

XP_024995361.1 formin-like protein 3 [Cynara cardunculus var. scolymus]1.9e-1329.17Show/hide
Query:  VAFSSACINNVYELRDVPDAEGNTLLNCLDDDFLNAVLLAVARPGAKWDNHGAARTSKSQLLDFEATCWMHWVKNRIMPTTHDATLSLQRVVLVYCIMKG
        V++S   IN++ EL     ++ + L     D+ L+ +L  VA  G  W   G AR  K+Q L  EA  W +++++ I P +HD  L L+RV+++YCI++ 
Subjt:  VAFSSACINNVYELRDVPDAEGNTLLNCLDDDFLNAVLLAVARPGAKWDNHGAARTSKSQLLDFEATCWMHWVKNRIMPTTHDATLSLQRVVLVYCIMKG

Query:  IPLDLGKILVKTLRQTAAKPKGAMFCPGLVTRLCRASGLQPAADEEIRPMRKDFDDQWWTRVTRTRDMRLQGSTQQPAPASQPTAPASEAPK
         P D+G+++   ++    +  G +  P L+ RL + + +  A  +++  M K   D    +    R MR+  + Q  AP S   A   E  K
Subjt:  IPLDLGKILVKTLRQTAAKPKGAMFCPGLVTRLCRASGLQPAADEEIRPMRKDFDDQWWTRVTRTRDMRLQGSTQQPAPASQPTAPASEAPK

TrEMBL top hitse value%identityAlignment
A0A2P5AGA5 Uncharacterized protein (Fragment)5.4e-1431.75Show/hide
Query:  VAFSSACINNVYELRDVPDAEGNTLLNCLDDDFLNAVLLAVARPGAKWD-NHGAARTSKSQLLDFEATCWMHWVKNRIMPTTHDATLSLQRVVLVYCIMK
        V++S   IN V+ L D  D     + N  + D +  VL  VA  GA+W+ +   A T     L   A  W H++K+ ++PTTH  T+S  R++L++ ++ 
Subjt:  VAFSSACINNVYELRDVPDAEGNTLLNCLDDDFLNAVLLAVARPGAKWD-NHGAARTSKSQLLDFEATCWMHWVKNRIMPTTHDATLSLQRVVLVYCIMK

Query:  GIPLDLGKILVKTLRQTAAKPKGAMFCPGLVTRLCRASGLQPAADEEIRPMRKDFDDQWWTRVTRTRDMRLQGSTQQPAPASQPTAPAS
        G  +++G+++   +R  AA+  GA+F P L+TRLCR +      +EE      + D     R+T+        STQQP+ +   TA +S
Subjt:  GIPLDLGKILVKTLRQTAAKPKGAMFCPGLVTRLCRASGLQPAADEEIRPMRKDFDDQWWTRVTRTRDMRLQGSTQQPAPASQPTAPAS

A0A2P5BCG4 Uncharacterized protein (Fragment)7.1e-1431.75Show/hide
Query:  VAFSSACINNVYELRDVPDAEGNTLLNCLDDDFLNAVLLAVARPGAKWD-NHGAARTSKSQLLDFEATCWMHWVKNRIMPTTHDATLSLQRVVLVYCIMK
        V++S   IN V+ L D  D     + N    D +  VL  VA  GA+W+ +   A T     L   A  W H++K+R++PTTH  T+S  R++L++ ++ 
Subjt:  VAFSSACINNVYELRDVPDAEGNTLLNCLDDDFLNAVLLAVARPGAKWD-NHGAARTSKSQLLDFEATCWMHWVKNRIMPTTHDATLSLQRVVLVYCIMK

Query:  GIPLDLGKILVKTLRQTAAKPKGAMFCPGLVTRLCRASGLQPAADEEIRPMRKDFDDQWWTRVTRTRDMRLQGSTQQPAPASQPTAPAS
        G  +++G+++   +R  AA+  GA+F P L+TRLCR +      +EE      + D      V R        STQQP+ +   TA ++
Subjt:  GIPLDLGKILVKTLRQTAAKPKGAMFCPGLVTRLCRASGLQPAADEEIRPMRKDFDDQWWTRVTRTRDMRLQGSTQQPAPASQPTAPAS

A0A2P5CPE8 Uncharacterized protein9.3e-1435.56Show/hide
Query:  VAFSSACINNVYELRDVPDAEGNTLLNCLDDDFLNAVLLAVARPGAKWD-NHGAARTSKSQLLDFEATCWMHWVKNRIMPTTHDATLSLQRVVLVYCIMK
        V  S+  IN +Y L D P  E +  +  + +  L  VL  VA  GA+W+ +   A T     L+  A  W H++K+R++PTTH  T+S +RV+L+Y ++ 
Subjt:  VAFSSACINNVYELRDVPDAEGNTLLNCLDDDFLNAVLLAVARPGAKWD-NHGAARTSKSQLLDFEATCWMHWVKNRIMPTTHDATLSLQRVVLVYCIMK

Query:  GIPLDLGKILVKTLRQTAAKPKGAMFCPGLVTRLC
        G  +++G+I+ + +   AA+  GA+F P L+TR+C
Subjt:  GIPLDLGKILVKTLRQTAAKPKGAMFCPGLVTRLC

A0A2P5DXM3 Uncharacterized protein6.0e-1331.75Show/hide
Query:  VAFSSACINNVYELRDVPDAEGNTLLNCLDDDFLNAVLLAVARPGAKWD-NHGAARTSKSQLLDFEATCWMHWVKNRIMPTTHDATLSLQRVVLVYCIMK
        V++S   IN V+ L D  D     + N  + + +  VL  VA  GA+W+ +   A T     L   A  W H++K+R++PTTH   +S  R++L++ ++ 
Subjt:  VAFSSACINNVYELRDVPDAEGNTLLNCLDDDFLNAVLLAVARPGAKWD-NHGAARTSKSQLLDFEATCWMHWVKNRIMPTTHDATLSLQRVVLVYCIMK

Query:  GIPLDLGKILVKTLRQTAAKPKGAMFCPGLVTRLCRASGLQPAADEEIRPMRKDFDDQWWTRVTRTRDMRLQGSTQQPAPASQPTAPAS
        G  +++G+++   +R  AA+  GA+F P L+TRLCR +      +EE      + D     R+T+        STQQP+ +S+P A +S
Subjt:  GIPLDLGKILVKTLRQTAAKPKGAMFCPGLVTRLCRASGLQPAADEEIRPMRKDFDDQWWTRVTRTRDMRLQGSTQQPAPASQPTAPAS

A0A392M2J7 Uncharacterized protein (Fragment)7.6e-1632.69Show/hide
Query:  VAFSSACINNVYELRDVPDAEGNTLLNCLDDDFLNAVLLAVARPGAKWD--NHGAARTSKSQLLDFEATCWMHWVKNRIMPTTHDATLSLQRVVLVYCIM
        + +S+A INN Y L+   D E  TL++ + D+ L AV+  +  PG +W   N+      K   L  E   W   +K+ I+PTTH+ T++  R+VL++CIM
Subjt:  VAFSSACINNVYELRDVPDAEGNTLLNCLDDDFLNAVLLAVARPGAKWD--NHGAARTSKSQLLDFEATCWMHWVKNRIMPTTHDATLSLQRVVLVYCIM

Query:  KGIPLDLGKILVKTLRQTAAKPKGAMFCPGLVTRLCRASGLQPAADEEIRPMRKDF
        + IP+++G+I+ + +   + + +G ++ P L+T LC+A  ++  A +E  P  + F
Subjt:  KGIPLDLGKILVKTLRQTAAKPKGAMFCPGLVTRLCRASGLQPAADEEIRPMRKDF

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCTGACTCTCAAAACCTGTCCATCACTGGTTACGCAGATGATGCGGTTTCCTCATCACCAGAGGTGGACGGCCCCCTCAATGACGTTGTTTCCTCCTCTGGCGAAGA
AAACGAGAACCCAAACCAAAGCAACCCCATGGAAACAGACGAAGCCGAAGTCATTGATGTTGAGCAAACCCCCACATCCACAGCCAACCCCACTGAGGAGCAAGAAAAGG
CCGCCGCAGAGGAAACTGCGCGCAAGGGCGCCGCAGATGAAGAAGCGGCCGGAGAAAGAGAAGGCGCCAGCAAGATGGCGCAAGACCCAATCGCCGCAGAAGTTGCCGCA
ACCAATCTAGCCATCATTGCGGCAGCATTAGACTCAGAGTCTACTGATTTTGAGGATGAGTTTCCCCTAACGCATCGCCGCAACATCCAGCCCACAGGGGTAGTCATCCA
AGAACAATCTGAGAAGTCTGCGTCAGGCCAAAGCCACCTAGTCGCATTCTCCTCTGCGTGCATCAACAACGTGTACGAGCTGCGAGATGTACCTGACGCAGAGGGAAATA
CGCTACTCAACTGCCTCGACGACGATTTCCTGAACGCAGTGCTACTTGCGGTGGCCAGACCTGGGGCCAAGTGGGACAACCATGGAGCTGCGAGGACCTCGAAATCGCAA
CTACTGGACTTTGAGGCCACTTGCTGGATGCACTGGGTGAAGAATCGCATCATGCCCACAACGCATGATGCCACATTAAGCCTTCAAAGGGTGGTCCTCGTATACTGCAT
CATGAAGGGGATACCACTAGACTTGGGGAAAATCCTTGTCAAAACATTGCGCCAGACTGCCGCAAAACCTAAGGGCGCAATGTTTTGCCCGGGCCTCGTCACAAGACTCT
GTCGCGCATCAGGTCTTCAGCCCGCAGCAGACGAAGAAATCCGACCTATGCGGAAGGATTTTGACGACCAATGGTGGACGCGCGTAACGCGCACCCGCGATATGCGTCTG
CAAGGAAGCACCCAGCAACCAGCACCCGCATCCCAACCAACAGCGCCTGCGTCTGAAGCACCAAAAAAGAAGAGGCACAAGAAAACTGCAGGTAGAAATCCTCCACCAAC
CGCAAGGACCTCGAAATCAACTACATCGGCGCAGGAAAGCACTGTCTGCGCCCAAACTCAAGGATCCTTGCCACCACCACCGCCACCACCACCACCACCACCACCTTCGC
CGCCGCATATCCAACAATCACCTCCTCCGCAACACAGCGAGACCTTGCGCCAAGAGGAGATTTTTGAAGACTCATTGCCTAGCCCCACTCGCAATGAAGAAGTTCCTACG
CCGAGCTCCACACCGCAAGCCACAGCTTCTGCGAGCACAAGCCATGCTGCGGCGGATCCACAACTTGATGTGGATACAACCCTTATATTTTCAGAGTTGCGACAGATGAT
TCAAGAAGTCGCAAAGCCCCTGTGTTTGCAGCAAGTGCGAATGTGCCAGCAACAAGAGTTGCTGTGCAAGCAACAAGAAGAACTATCACAGCGAATAAACGCCTTAGTCC
TCTTCTTGATGCGATGGACTGAATCCTTTGGCCGCCTACCAATCACGCCAAATCTGTTCGCACGGCCAACTGAGCAACAAAGATCCAATGGCGCAGGCCCATCACAAGTG
CGCGATTCCATGCCTCCGCCTACGCCGAGGGATCCAAGACCACCTCCACCACTGCCAACGCAGGAGTAG
mRNA sequenceShow/hide mRNA sequence
ATGTCTGACTCTCAAAACCTGTCCATCACTGGTTACGCAGATGATGCGGTTTCCTCATCACCAGAGGTGGACGGCCCCCTCAATGACGTTGTTTCCTCCTCTGGCGAAGA
AAACGAGAACCCAAACCAAAGCAACCCCATGGAAACAGACGAAGCCGAAGTCATTGATGTTGAGCAAACCCCCACATCCACAGCCAACCCCACTGAGGAGCAAGAAAAGG
CCGCCGCAGAGGAAACTGCGCGCAAGGGCGCCGCAGATGAAGAAGCGGCCGGAGAAAGAGAAGGCGCCAGCAAGATGGCGCAAGACCCAATCGCCGCAGAAGTTGCCGCA
ACCAATCTAGCCATCATTGCGGCAGCATTAGACTCAGAGTCTACTGATTTTGAGGATGAGTTTCCCCTAACGCATCGCCGCAACATCCAGCCCACAGGGGTAGTCATCCA
AGAACAATCTGAGAAGTCTGCGTCAGGCCAAAGCCACCTAGTCGCATTCTCCTCTGCGTGCATCAACAACGTGTACGAGCTGCGAGATGTACCTGACGCAGAGGGAAATA
CGCTACTCAACTGCCTCGACGACGATTTCCTGAACGCAGTGCTACTTGCGGTGGCCAGACCTGGGGCCAAGTGGGACAACCATGGAGCTGCGAGGACCTCGAAATCGCAA
CTACTGGACTTTGAGGCCACTTGCTGGATGCACTGGGTGAAGAATCGCATCATGCCCACAACGCATGATGCCACATTAAGCCTTCAAAGGGTGGTCCTCGTATACTGCAT
CATGAAGGGGATACCACTAGACTTGGGGAAAATCCTTGTCAAAACATTGCGCCAGACTGCCGCAAAACCTAAGGGCGCAATGTTTTGCCCGGGCCTCGTCACAAGACTCT
GTCGCGCATCAGGTCTTCAGCCCGCAGCAGACGAAGAAATCCGACCTATGCGGAAGGATTTTGACGACCAATGGTGGACGCGCGTAACGCGCACCCGCGATATGCGTCTG
CAAGGAAGCACCCAGCAACCAGCACCCGCATCCCAACCAACAGCGCCTGCGTCTGAAGCACCAAAAAAGAAGAGGCACAAGAAAACTGCAGGTAGAAATCCTCCACCAAC
CGCAAGGACCTCGAAATCAACTACATCGGCGCAGGAAAGCACTGTCTGCGCCCAAACTCAAGGATCCTTGCCACCACCACCGCCACCACCACCACCACCACCACCTTCGC
CGCCGCATATCCAACAATCACCTCCTCCGCAACACAGCGAGACCTTGCGCCAAGAGGAGATTTTTGAAGACTCATTGCCTAGCCCCACTCGCAATGAAGAAGTTCCTACG
CCGAGCTCCACACCGCAAGCCACAGCTTCTGCGAGCACAAGCCATGCTGCGGCGGATCCACAACTTGATGTGGATACAACCCTTATATTTTCAGAGTTGCGACAGATGAT
TCAAGAAGTCGCAAAGCCCCTGTGTTTGCAGCAAGTGCGAATGTGCCAGCAACAAGAGTTGCTGTGCAAGCAACAAGAAGAACTATCACAGCGAATAAACGCCTTAGTCC
TCTTCTTGATGCGATGGACTGAATCCTTTGGCCGCCTACCAATCACGCCAAATCTGTTCGCACGGCCAACTGAGCAACAAAGATCCAATGGCGCAGGCCCATCACAAGTG
CGCGATTCCATGCCTCCGCCTACGCCGAGGGATCCAAGACCACCTCCACCACTGCCAACGCAGGAGTAG
Protein sequenceShow/hide protein sequence
MSDSQNLSITGYADDAVSSSPEVDGPLNDVVSSSGEENENPNQSNPMETDEAEVIDVEQTPTSTANPTEEQEKAAAEETARKGAADEEAAGEREGASKMAQDPIAAEVAA
TNLAIIAAALDSESTDFEDEFPLTHRRNIQPTGVVIQEQSEKSASGQSHLVAFSSACINNVYELRDVPDAEGNTLLNCLDDDFLNAVLLAVARPGAKWDNHGAARTSKSQ
LLDFEATCWMHWVKNRIMPTTHDATLSLQRVVLVYCIMKGIPLDLGKILVKTLRQTAAKPKGAMFCPGLVTRLCRASGLQPAADEEIRPMRKDFDDQWWTRVTRTRDMRL
QGSTQQPAPASQPTAPASEAPKKKRHKKTAGRNPPPTARTSKSTTSAQESTVCAQTQGSLPPPPPPPPPPPPSPPHIQQSPPPQHSETLRQEEIFEDSLPSPTRNEEVPT
PSSTPQATASASTSHAAADPQLDVDTTLIFSELRQMIQEVAKPLCLQQVRMCQQQELLCKQQEELSQRINALVLFLMRWTESFGRLPITPNLFARPTEQQRSNGAGPSQV
RDSMPPPTPRDPRPPPPLPTQE