; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg028582 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg028582
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionNuclear cap-binding protein subunit 2
Genome locationscaffold7:10867488..10873477
RNA-Seq ExpressionSpg028582
SyntenySpg028582
Gene Ontology termsGO:0045292 - mRNA cis splicing, via spliceosome (biological process)
GO:0005634 - nucleus (cellular component)
GO:0005846 - nuclear cap binding complex (cellular component)
GO:0000339 - RNA cap binding (molecular function)
InterPro domainsIPR000504 - RNA recognition motif domain
IPR012677 - Nucleotide-binding alpha-beta plait domain superfamily
IPR027157 - Nuclear cap-binding protein subunit 2
IPR034148 - NCBP2, RNA recognition motif
IPR035979 - RNA-binding domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7026974.1 Nuclear cap-binding protein subunit 2 [Cucurbita argyrosperma subsp. argyrosperma]6.5e-12273.03Show/hide
Query:  YQDPSKLSVYRDRRFQGTQDEFEQALQTSTTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFILYYSREDTEDAVKFISGTILDDRP
        ++DPSKLSVYRDRRFQGTQDEFE AL +STTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCF+LYYSREDTEDAVKFISGTILDDRP
Subjt:  YQDPSKLSVYRDRRFQGTQDEFEQALQTSTTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFILYYSREDTEDAVKFISGTILDDRP

Query:  IRVDFDWGFQDGRQWGRGRSGGQVLFLTYVTFMTWSLPSLPVYILF---------------------------------------CVFL-----------
        IRVDFDWGFQDGRQWGRGRSGGQVLFLTYVTF T SLPSLPVY LF                                       C+FL           
Subjt:  IRVDFDWGFQDGRQWGRGRSGGQVLFLTYVTFMTWSLPSLPVYILF---------------------------------------CVFL-----------

Query:  -----------------YRGGYGKLVQKELEAQRQLVDYGTGSLGSMQPVMPQYGKHGGSHGHGHRHGRDYHHRKRYRDDDRHAHESSKRTSDYESRRNP
                           GGYGKLVQKELEAQRQLVDYGT SLGSM PVM Q+G HGGSHGHG+RHGRDYHHRKR+RDDDRHAHESSKRTSD+ESRRN 
Subjt:  -----------------YRGGYGKLVQKELEAQRQLVDYGTGSLGSMQPVMPQYGKHGGSHGHGHRHGRDYHHRKRYRDDDRHAHESSKRTSDYESRRNP

Query:  DHESRPEKNPRFRESGDSDEEDDDDRKQRH
        +HESRPEKNPRFRESGDSDEEDDDDRKQRH
Subjt:  DHESRPEKNPRFRESGDSDEEDDDDRKQRH

XP_004137136.1 nuclear cap-binding protein subunit 2 [Cucumis sativus]3.3e-11885.17Show/hide
Query:  YQDPSKLSVYRDRRFQGTQDEFEQALQTSTTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFILYYSREDTEDAVKFISGTILDDRP
        ++DP+KLS+YRDRRF G+QDEFE ALQTSTTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCF+LYYSREDTEDAVK+ISGTILDDRP
Subjt:  YQDPSKLSVYRDRRFQGTQDEFEQALQTSTTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFILYYSREDTEDAVKFISGTILDDRP

Query:  IRVDFDWGFQDGRQWGRGRSGGQVLFLTYVTFMTWSLPSLPVYILFCVFLYRGGYGKLVQKELEAQRQLVDYGTGSLGSMQPVMPQYGKHGGSHGHGHRH
        IRVDFDWGFQDGRQWGRGRSGGQV       + T   P             RGGYGKLVQKELEAQRQLVDYGTGSLGSM PVMPQYGKHGGSHGHG+RH
Subjt:  IRVDFDWGFQDGRQWGRGRSGGQVLFLTYVTFMTWSLPSLPVYILFCVFLYRGGYGKLVQKELEAQRQLVDYGTGSLGSMQPVMPQYGKHGGSHGHGHRH

Query:  GRDYHHRKRYRDDDRHAHESSKRTSDYESRRNPDHESRPEKNPRFRESGDSDEEDDDDRKQRH
        GRDYHHRKRYRDDDRHAHESSKRTSDYESRRN ++ESRPEKNPRFRESGDSDEEDDDDRKQRH
Subjt:  GRDYHHRKRYRDDDRHAHESSKRTSDYESRRNPDHESRPEKNPRFRESGDSDEEDDDDRKQRH

XP_008464581.1 PREDICTED: nuclear cap-binding protein subunit 2 [Cucumis melo]3.3e-11885.55Show/hide
Query:  YQDPSKLSVYRDRRFQGTQDEFEQALQTSTTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFILYYSREDTEDAVKFISGTILDDRP
        ++DP+KLSVYRDRRF G+QDEFE ALQTSTTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCF+LYYSREDTEDAVK+ISGTILDDRP
Subjt:  YQDPSKLSVYRDRRFQGTQDEFEQALQTSTTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFILYYSREDTEDAVKFISGTILDDRP

Query:  IRVDFDWGFQDGRQWGRGRSGGQVLFLTYVTFMTWSLPSLPVYILFCVFLYRGGYGKLVQKELEAQRQLVDYGTGSLGSMQPVMPQYGKHGGSHGHGHRH
        IRVDFDWGFQDGRQWGRGRSGGQV       + T   P             RGGYGKLVQKELEAQRQLVDYGTGSLGSM PVM QYGKHGGSHGHGHRH
Subjt:  IRVDFDWGFQDGRQWGRGRSGGQVLFLTYVTFMTWSLPSLPVYILFCVFLYRGGYGKLVQKELEAQRQLVDYGTGSLGSMQPVMPQYGKHGGSHGHGHRH

Query:  GRDYHHRKRYRDDDRHAHESSKRTSDYESRRNPDHESRPEKNPRFRESGDSDEEDDDDRKQRH
        GRDYHHRKRYRDDDRHAHESSKRTSDYESRRN ++ESRPEKNPRFRESGDSDEEDDDDRKQRH
Subjt:  GRDYHHRKRYRDDDRHAHESSKRTSDYESRRNPDHESRPEKNPRFRESGDSDEEDDDDRKQRH

XP_022986365.1 nuclear cap-binding protein subunit 2-like isoform X1 [Cucurbita maxima]4.4e-11885.55Show/hide
Query:  YQDPSKLSVYRDRRFQGTQDEFEQALQTSTTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFILYYSREDTEDAVKFISGTILDDRP
        ++DPSKLSVYRDRRFQGTQDEFE ALQTSTTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCF LYYSREDTEDAVK+ISGTILDDRP
Subjt:  YQDPSKLSVYRDRRFQGTQDEFEQALQTSTTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFILYYSREDTEDAVKFISGTILDDRP

Query:  IRVDFDWGFQDGRQWGRGRSGGQVLFLTYVTFMTWSLPSLPVYILFCVFLYRGGYGKLVQKELEAQRQLVDYGTGSLGSMQPVMPQYGKHGGSHGHGHRH
        IR DFDWGFQDGRQWGRGRSGGQV       + T   P             RGGYGKLVQKELEAQRQLVDYGTGSLGSM  V+PQYGKHGGSHG+GHRH
Subjt:  IRVDFDWGFQDGRQWGRGRSGGQVLFLTYVTFMTWSLPSLPVYILFCVFLYRGGYGKLVQKELEAQRQLVDYGTGSLGSMQPVMPQYGKHGGSHGHGHRH

Query:  GRDYHHRKRYRDDDRHAHESSKRTSDYESRRNPDHESRPEKNPRFRESGDSDEEDDDDRKQRH
        GRDYH+RKRYRDDDRHAHESSKRTSDY+SRRNPDHESRP+KNPRFRESGDSDEEDDDDRKQRH
Subjt:  GRDYHHRKRYRDDDRHAHESSKRTSDYESRRNPDHESRPEKNPRFRESGDSDEEDDDDRKQRH

XP_038900343.1 nuclear cap-binding protein subunit 2 [Benincasa hispida]5.7e-11886.26Show/hide
Query:  YQDPSKLSVYRDRRFQGTQDEFEQALQTSTTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFILYYSREDTEDAVKFISGTILDDRP
        ++DP+KLSVYRDRRF GTQDEFE ALQTSTTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCF+LYYSREDTEDAVK+ISGTILDDRP
Subjt:  YQDPSKLSVYRDRRFQGTQDEFEQALQTSTTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFILYYSREDTEDAVKFISGTILDDRP

Query:  IRVDFDWGFQDGRQWGRGRSGGQVLFLTYVTFMTWSLPSLPVYILFCVFLYRGGYGKLVQKELEAQRQLVDYGTGSLGSMQPVMPQYGKHGGSHGHGHRH
        IRVDFDWGFQDGRQWGRGRSGGQV       + T   P             RGGYGKLVQKELEAQRQLVDYGTGSLGSM PVM QYGKHGGSHGHGHRH
Subjt:  IRVDFDWGFQDGRQWGRGRSGGQVLFLTYVTFMTWSLPSLPVYILFCVFLYRGGYGKLVQKELEAQRQLVDYGTGSLGSMQPVMPQYGKHGGSHGHGHRH

Query:  GRDYHHRKRYRDDDRHAHESSKRTSDYESRRNPDHESRPEKNPRFRESGDSDEEDDDDRKQR
        GRDYHHRKRYRDDDRHAHESSKRTSDYESRRNPDH+SRPEKNPRFRESGDSDEEDDDD+KQR
Subjt:  GRDYHHRKRYRDDDRHAHESSKRTSDYESRRNPDHESRPEKNPRFRESGDSDEEDDDDRKQR

TrEMBL top hitse value%identityAlignment
A0A0A0KVX7 Nuclear cap-binding protein subunit 22.1e-11885.93Show/hide
Query:  YQDPSKLSVYRDRRFQGTQDEFEQALQTSTTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFILYYSREDTEDAVKFISGTILDDRP
        ++DP+KLS+YRDRRF G+QDEFE ALQTSTTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCF+LYYSREDTEDAVK+ISGTILDDRP
Subjt:  YQDPSKLSVYRDRRFQGTQDEFEQALQTSTTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFILYYSREDTEDAVKFISGTILDDRP

Query:  IRVDFDWGFQDGRQWGRGRSGGQVLFLTYVTFMTWSLPSLPVYILFCVFLYRGGYGKLVQKELEAQRQLVDYGTGSLGSMQPVMPQYGKHGGSHGHGHRH
        IRVDFDWGFQDGRQWGRGRSGGQV       + T   P     ILF      GGYGKLVQKELEAQRQLVDYGTGSLGSM PVMPQYGKHGGSHGHG+RH
Subjt:  IRVDFDWGFQDGRQWGRGRSGGQVLFLTYVTFMTWSLPSLPVYILFCVFLYRGGYGKLVQKELEAQRQLVDYGTGSLGSMQPVMPQYGKHGGSHGHGHRH

Query:  GRDYHHRKRYRDDDRHAHESSKRTSDYESRRNPDHESRPEKNPRFRESGDSDEEDDDDRKQRH
        GRDYHHRKRYRDDDRHAHESSKRTSDYESRRN ++ESRPEKNPRFRESGDSDEEDDDDRKQRH
Subjt:  GRDYHHRKRYRDDDRHAHESSKRTSDYESRRNPDHESRPEKNPRFRESGDSDEEDDDDRKQRH

A0A1S3CLT9 Nuclear cap-binding protein subunit 21.6e-11885.55Show/hide
Query:  YQDPSKLSVYRDRRFQGTQDEFEQALQTSTTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFILYYSREDTEDAVKFISGTILDDRP
        ++DP+KLSVYRDRRF G+QDEFE ALQTSTTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCF+LYYSREDTEDAVK+ISGTILDDRP
Subjt:  YQDPSKLSVYRDRRFQGTQDEFEQALQTSTTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFILYYSREDTEDAVKFISGTILDDRP

Query:  IRVDFDWGFQDGRQWGRGRSGGQVLFLTYVTFMTWSLPSLPVYILFCVFLYRGGYGKLVQKELEAQRQLVDYGTGSLGSMQPVMPQYGKHGGSHGHGHRH
        IRVDFDWGFQDGRQWGRGRSGGQV       + T   P             RGGYGKLVQKELEAQRQLVDYGTGSLGSM PVM QYGKHGGSHGHGHRH
Subjt:  IRVDFDWGFQDGRQWGRGRSGGQVLFLTYVTFMTWSLPSLPVYILFCVFLYRGGYGKLVQKELEAQRQLVDYGTGSLGSMQPVMPQYGKHGGSHGHGHRH

Query:  GRDYHHRKRYRDDDRHAHESSKRTSDYESRRNPDHESRPEKNPRFRESGDSDEEDDDDRKQRH
        GRDYHHRKRYRDDDRHAHESSKRTSDYESRRN ++ESRPEKNPRFRESGDSDEEDDDDRKQRH
Subjt:  GRDYHHRKRYRDDDRHAHESSKRTSDYESRRNPDHESRPEKNPRFRESGDSDEEDDDDRKQRH

A0A6J1FX36 Nuclear cap-binding protein subunit 23.1e-11784.79Show/hide
Query:  YQDPSKLSVYRDRRFQGTQDEFEQALQTSTTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFILYYSREDTEDAVKFISGTILDDRP
        ++DPSKLSVYRDRRFQGTQDEFE ALQTSTTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCF+LYYSREDTEDAVK+ISGTILDDRP
Subjt:  YQDPSKLSVYRDRRFQGTQDEFEQALQTSTTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFILYYSREDTEDAVKFISGTILDDRP

Query:  IRVDFDWGFQDGRQWGRGRSGGQVLFLTYVTFMTWSLPSLPVYILFCVFLYRGGYGKLVQKELEAQRQLVDYGTGSLGSMQPVMPQYGKHGGSHGHGHRH
        IR DFDWGFQDGRQWGRGRSGGQV       + T   P             RGGYGKLVQKELEAQRQLVDYGTGSLGS+  V+PQYGKHGGSHG+G RH
Subjt:  IRVDFDWGFQDGRQWGRGRSGGQVLFLTYVTFMTWSLPSLPVYILFCVFLYRGGYGKLVQKELEAQRQLVDYGTGSLGSMQPVMPQYGKHGGSHGHGHRH

Query:  GRDYHHRKRYRDDDRHAHESSKRTSDYESRRNPDHESRPEKNPRFRESGDSDEEDDDDRKQRH
        GRDYH+RKRYRDDDRHAHESSKRTSDY+SRRNPDHESRP+KNPRFRESGDSDEEDDDDRKQRH
Subjt:  GRDYHHRKRYRDDDRHAHESSKRTSDYESRRNPDHESRPEKNPRFRESGDSDEEDDDDRKQRH

A0A6J1J7C7 Nuclear cap-binding protein subunit 22.1e-11885.55Show/hide
Query:  YQDPSKLSVYRDRRFQGTQDEFEQALQTSTTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFILYYSREDTEDAVKFISGTILDDRP
        ++DPSKLSVYRDRRFQGTQDEFE ALQTSTTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCF LYYSREDTEDAVK+ISGTILDDRP
Subjt:  YQDPSKLSVYRDRRFQGTQDEFEQALQTSTTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFILYYSREDTEDAVKFISGTILDDRP

Query:  IRVDFDWGFQDGRQWGRGRSGGQVLFLTYVTFMTWSLPSLPVYILFCVFLYRGGYGKLVQKELEAQRQLVDYGTGSLGSMQPVMPQYGKHGGSHGHGHRH
        IR DFDWGFQDGRQWGRGRSGGQV       + T   P             RGGYGKLVQKELEAQRQLVDYGTGSLGSM  V+PQYGKHGGSHG+GHRH
Subjt:  IRVDFDWGFQDGRQWGRGRSGGQVLFLTYVTFMTWSLPSLPVYILFCVFLYRGGYGKLVQKELEAQRQLVDYGTGSLGSMQPVMPQYGKHGGSHGHGHRH

Query:  GRDYHHRKRYRDDDRHAHESSKRTSDYESRRNPDHESRPEKNPRFRESGDSDEEDDDDRKQRH
        GRDYH+RKRYRDDDRHAHESSKRTSDY+SRRNPDHESRP+KNPRFRESGDSDEEDDDDRKQRH
Subjt:  GRDYHHRKRYRDDDRHAHESSKRTSDYESRRNPDHESRPEKNPRFRESGDSDEEDDDDRKQRH

A0A6J1JFW0 Nuclear cap-binding protein subunit 25.2e-11785.55Show/hide
Query:  YQDPSKLSVYRDRRFQGTQDEFEQALQTSTTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFILYYSREDTEDAVKFISGTILDDRP
        ++DPSKLSVYRDRRFQGTQDEFE ALQTSTTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCF LYYSREDTEDAVK+ISGTILDDRP
Subjt:  YQDPSKLSVYRDRRFQGTQDEFEQALQTSTTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFILYYSREDTEDAVKFISGTILDDRP

Query:  IRVDFDWGFQDGRQWGRGRSGGQVLFLTYVTFMTWSLPSLPVYILFCVFLYRGGYGKLVQKELEAQRQLVDYGTGSLGSMQPVMPQYGKHGGSHGHGHRH
        IR DFDWGFQDGRQWGRGRSGGQV       + T   P             RGGYGKLVQKELEAQRQLVDYGTGSLGSM  V+PQYGKHGGSHG+GHRH
Subjt:  IRVDFDWGFQDGRQWGRGRSGGQVLFLTYVTFMTWSLPSLPVYILFCVFLYRGGYGKLVQKELEAQRQLVDYGTGSLGSMQPVMPQYGKHGGSHGHGHRH

Query:  GRDYHHRKRYRDDDRHAHESSKRTSDYESRRNPDHESRPEKNPRFRESGDSDEEDDDDRKQRH
        GRDYH+RKRYRDDDRHAHESSKRTSDY+SRRNPDHESRP KNPRFRESGDSDEEDDDDRKQRH
Subjt:  GRDYHHRKRYRDDDRHAHESSKRTSDYESRRNPDHESRPEKNPRFRESGDSDEEDDDDRKQRH

SwissProt top hitse value%identityAlignment
B1WC40 Nuclear cap-binding protein subunit 28.2e-4356.05Show/hide
Query:  KLSVYRDRRFQGTQDEFEQALQTSTTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFILYYSREDTEDAVKFISGTILDDRPIRVDF
        +LS YRD+ F+G  +E E+ L+ S T+YVGN+SFYTTEEQ+YELFS++G+IKKIIMGLDK  KT CGFCF+ YYSR D E+A+++I+GT LDDR IR D+
Subjt:  KLSVYRDRRFQGTQDEFEQALQTSTTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFILYYSREDTEDAVKFISGTILDDRPIRVDF

Query:  DWGFQDGRQWGRGRSGGQVLFLTYVTFMTWSLPSLPVYILFCVFLYRGGYGKLVQKE
        D GF++GRQ+GRGRSGGQV       +                   RGGYGKL QK+
Subjt:  DWGFQDGRQWGRGRSGGQVLFLTYVTFMTWSLPSLPVYILFCVFLYRGGYGKLVQKE

B7P877 Nuclear cap-binding protein subunit 21.1e-4265.25Show/hide
Query:  LSVYRDRRFQGTQDEFEQALQTSTTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFILYYSREDTEDAVKFISGTILDDRPIRVDFD
        LS YRD+ F+G++ E E+ L+ STT+YVGNMSFYTTEEQ+YELFS+ G++KK+IMGLD+  KTPCGFCF+ YY+RED E+A+++++GT LDDR IR D+D
Subjt:  LSVYRDRRFQGTQDEFEQALQTSTTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFILYYSREDTEDAVKFISGTILDDRPIRVDFD

Query:  WGFQDGRQWGRGRSGGQV
         GF +GRQ+GRG+SGGQV
Subjt:  WGFQDGRQWGRGRSGGQV

Q84L14 Nuclear cap-binding protein subunit 21.9e-7965.28Show/hide
Query:  YQDPSKLSVYRDRRFQGTQDEFEQALQTSTTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFILYYSREDTEDAVKFISGTILDDRP
        ++DP+KLS YRDRRF GTQ+E+E ALQ S TVYVGNMSFYTTEEQ YELFSRAGEI+KIIMGLDKNSKTPCGFCFILYYSRED EDAVK+ISGT+LDDRP
Subjt:  YQDPSKLSVYRDRRFQGTQDEFEQALQTSTTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFILYYSREDTEDAVKFISGTILDDRP

Query:  IRVDFDWGFQDGRQWGRGRSGGQVLFLTYVTFMTWSLPSLPVYILFCVFLYRGGYGKLVQKELEAQRQLVDYGTGSLGSMQP-VMPQYGKHGGSHGHG--
        IRVDFDWGF++GRQWGRGRSGGQV       + T   P             RGGYGK+VQKELEAQR+LVDYG    G+ QP   PQY +     G+G  
Subjt:  IRVDFDWGFQDGRQWGRGRSGGQVLFLTYVTFMTWSLPSLPVYILFCVFLYRGGYGKLVQKELEAQRQLVDYGTGSLGSMQP-VMPQYGKHGGSHGHG--

Query:  HRHGRDYHHRKRYRDDDRHAHESSKRTSDYESRRNPDHESRPEKNPRFRESGDSDEEDDDDRKQR
        +R+ RDY  RKRYR+D+R    SS+R  D E +R+       EKNPRFRE GDSDEEDDD  K+R
Subjt:  HRHGRDYHHRKRYRDDDRHAHESSKRTSDYESRRNPDHESRPEKNPRFRESGDSDEEDDDDRKQR

Q9CQ49 Nuclear cap-binding protein subunit 28.2e-4356.05Show/hide
Query:  KLSVYRDRRFQGTQDEFEQALQTSTTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFILYYSREDTEDAVKFISGTILDDRPIRVDF
        +LS YRD+ F+G  +E E+ L+ S T+YVGN+SFYTTEEQ+YELFS++G+IKKIIMGLDK  KT CGFCF+ YYSR D E+A+++I+GT LDDR IR D+
Subjt:  KLSVYRDRRFQGTQDEFEQALQTSTTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFILYYSREDTEDAVKFISGTILDDRPIRVDF

Query:  DWGFQDGRQWGRGRSGGQVLFLTYVTFMTWSLPSLPVYILFCVFLYRGGYGKLVQKE
        D GF++GRQ+GRGRSGGQV       +                   RGGYGKL QK+
Subjt:  DWGFQDGRQWGRGRSGGQVLFLTYVTFMTWSLPSLPVYILFCVFLYRGGYGKLVQKE

Q9XFD1 Nuclear cap-binding protein subunit 27.3e-9267.54Show/hide
Query:  YQDPSKLSVYRDRRFQGTQDEFEQALQTSTTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFILYYSREDTEDAVKFISGTILDDRP
        +++ +KLS YRDRRF GTQ+EF++AL+ STTVY+GN+SFYTTEEQ+YELFSRAGEIKKIIMGLDKN+KTPCGFCF+L+YSREDTEDAVK+ISGTILDDRP
Subjt:  YQDPSKLSVYRDRRFQGTQDEFEQALQTSTTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFILYYSREDTEDAVKFISGTILDDRP

Query:  IRVDFDWGFQDGRQWGRGRSGGQVLFLTYVTFMTWSLPSLPVYILFCVFLYRGGYGKLVQKELEAQRQLVDYGTGSLGSMQPVMP-QYG---KHGGSHGH
        IRVDFDWGFQ+GRQWGRGRSGGQV       + T   P+            RGGYGKLVQKELEAQRQLVDYGTGSLG+     P  YG   + GG++G 
Subjt:  IRVDFDWGFQDGRQWGRGRSGGQVLFLTYVTFMTWSLPSLPVYILFCVFLYRGGYGKLVQKELEAQRQLVDYGTGSLGSMQPVMP-QYG---KHGGSHGH

Query:  G--HRHGRDYHHRKRYRDDDRHAHESSKRTSDYESRRNPDHESRPEKNPRFRESGDSDEEDDDDRKQR
        G  +RHGR  +HRKR RDDDR+  ++S+R +D+ESRR+ D + RPEKNPRFRESGDSD++ +DDRK+R
Subjt:  G--HRHGRDYHHRKRYRDDDRHAHESSKRTSDYESRRNPDHESRPEKNPRFRESGDSDEEDDDDRKQR

Arabidopsis top hitse value%identityAlignment
AT1G66260.1 RNA-binding (RRM/RBD/RNP motifs) family protein2.3e-0829.41Show/hide
Query:  RDRRFQGTQDEFEQAL--------QTSTTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFILYYSREDTEDAVKFISGTILDDRPIR
        R   +Q   D +E+ L        +  TTVY+ N+    T E + EL++  GE+K+  +  DKN + P G   ++Y  R D   A++  +  +LD RP++
Subjt:  RDRRFQGTQDEFEQAL--------QTSTTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFILYYSREDTEDAVKFISGTILDDRPIR

Query:  VD
        ++
Subjt:  VD

AT1G66260.2 RNA-binding (RRM/RBD/RNP motifs) family protein2.3e-0829.41Show/hide
Query:  RDRRFQGTQDEFEQAL--------QTSTTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFILYYSREDTEDAVKFISGTILDDRPIR
        R   +Q   D +E+ L        +  TTVY+ N+    T E + EL++  GE+K+  +  DKN + P G   ++Y  R D   A++  +  +LD RP++
Subjt:  RDRRFQGTQDEFEQAL--------QTSTTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFILYYSREDTEDAVKFISGTILDDRPIR

Query:  VD
        ++
Subjt:  VD

AT3G46020.1 RNA-binding (RRM/RBD/RNP motifs) family protein1.4e-0836.25Show/hide
Query:  ALQTSTTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFILYYSREDTEDAVKFISGTILDDRPIRVD
        A + S  ++V  +S YTT++ + +LFS  G+IK+  +  D  ++ P GF FI + S +D   A+K + G I+D R I V+
Subjt:  ALQTSTTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFILYYSREDTEDAVKFISGTILDDRPIRVD

AT5G44200.1 CAP-binding protein 205.2e-9367.54Show/hide
Query:  YQDPSKLSVYRDRRFQGTQDEFEQALQTSTTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFILYYSREDTEDAVKFISGTILDDRP
        +++ +KLS YRDRRF GTQ+EF++AL+ STTVY+GN+SFYTTEEQ+YELFSRAGEIKKIIMGLDKN+KTPCGFCF+L+YSREDTEDAVK+ISGTILDDRP
Subjt:  YQDPSKLSVYRDRRFQGTQDEFEQALQTSTTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFILYYSREDTEDAVKFISGTILDDRP

Query:  IRVDFDWGFQDGRQWGRGRSGGQVLFLTYVTFMTWSLPSLPVYILFCVFLYRGGYGKLVQKELEAQRQLVDYGTGSLGSMQPVMP-QYG---KHGGSHGH
        IRVDFDWGFQ+GRQWGRGRSGGQV       + T   P+            RGGYGKLVQKELEAQRQLVDYGTGSLG+     P  YG   + GG++G 
Subjt:  IRVDFDWGFQDGRQWGRGRSGGQVLFLTYVTFMTWSLPSLPVYILFCVFLYRGGYGKLVQKELEAQRQLVDYGTGSLGSMQPVMP-QYG---KHGGSHGH

Query:  G--HRHGRDYHHRKRYRDDDRHAHESSKRTSDYESRRNPDHESRPEKNPRFRESGDSDEEDDDDRKQR
        G  +RHGR  +HRKR RDDDR+  ++S+R +D+ESRR+ D + RPEKNPRFRESGDSD++ +DDRK+R
Subjt:  G--HRHGRDYHHRKRYRDDDRHAHESSKRTSDYESRRNPDHESRPEKNPRFRESGDSDEEDDDDRKQR

AT5G44200.2 CAP-binding protein 205.2e-9367.54Show/hide
Query:  YQDPSKLSVYRDRRFQGTQDEFEQALQTSTTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFILYYSREDTEDAVKFISGTILDDRP
        +++ +KLS YRDRRF GTQ+EF++AL+ STTVY+GN+SFYTTEEQ+YELFSRAGEIKKIIMGLDKN+KTPCGFCF+L+YSREDTEDAVK+ISGTILDDRP
Subjt:  YQDPSKLSVYRDRRFQGTQDEFEQALQTSTTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFILYYSREDTEDAVKFISGTILDDRP

Query:  IRVDFDWGFQDGRQWGRGRSGGQVLFLTYVTFMTWSLPSLPVYILFCVFLYRGGYGKLVQKELEAQRQLVDYGTGSLGSMQPVMP-QYG---KHGGSHGH
        IRVDFDWGFQ+GRQWGRGRSGGQV       + T   P+            RGGYGKLVQKELEAQRQLVDYGTGSLG+     P  YG   + GG++G 
Subjt:  IRVDFDWGFQDGRQWGRGRSGGQVLFLTYVTFMTWSLPSLPVYILFCVFLYRGGYGKLVQKELEAQRQLVDYGTGSLGSMQPVMP-QYG---KHGGSHGH

Query:  G--HRHGRDYHHRKRYRDDDRHAHESSKRTSDYESRRNPDHESRPEKNPRFRESGDSDEEDDDDRKQR
        G  +RHGR  +HRKR RDDDR+  ++S+R +D+ESRR+ D + RPEKNPRFRESGDSD++ +DDRK+R
Subjt:  G--HRHGRDYHHRKRYRDDDRHAHESSKRTSDYESRRNPDHESRPEKNPRFRESGDSDEEDDDDRKQR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCAATCGGATCTCTCCTCCTCAAGCCCTAAAAGTATAGAGAATGAAGGATGCCAAGAACAGGGAGATGGCGTTGAAAACAAAACGTTGGTGGATTTCCTAGAAGGTTA
TCAAGACCCATCAAAACTATCTGTATATCGGGATAGAAGATTTCAGGGAACACAAGATGAATTTGAACAGGCACTACAGACTTCAACCACTGTTTATGTGGGAAATATGT
CCTTTTACACGACGGAAGAGCAAGTTTATGAGCTATTTTCTCGAGCTGGAGAAATTAAGAAGATAATCATGGGTTTGGATAAGAATTCAAAAACACCTTGTGGTTTTTGT
TTTATCCTATACTATTCTCGGGAGGATACTGAGGATGCTGTAAAATTTATAAGTGGAACGATTCTTGATGATCGTCCTATTCGTGTGGATTTTGATTGGGGATTTCAGGA
TGGTAGGCAATGGGGTCGTGGACGAAGTGGTGGACAGGTACTGTTTCTGACCTATGTTACATTCATGACTTGGAGTCTACCATCACTTCCTGTTTATATTTTATTTTGCG
TTTTTCTATACAGAGGTGGCTATGGAAAGTTAGTTCAGAAAGAGTTAGAAGCACAGAGGCAGCTTGTGGATTATGGTACTGGTTCACTAGGCTCTATGCAGCCAGTCATG
CCTCAGTATGGAAAACATGGTGGAAGCCACGGACATGGGCATCGTCATGGTAGAGATTACCACCACCGCAAGCGCTACCGAGATGATGATCGCCATGCCCATGAAAGCTC
TAAGAGAACTTCGGATTATGAGTCTAGAAGAAACCCTGATCACGAATCCAGACCGGAGAAGAATCCAAGGTTTCGGGAGAGTGGCGATTCTGATGAAGAGGATGATGATG
ACCGAAAGCAGCGACATTAA
mRNA sequenceShow/hide mRNA sequence
ATGCAATCGGATCTCTCCTCCTCAAGCCCTAAAAGTATAGAGAATGAAGGATGCCAAGAACAGGGAGATGGCGTTGAAAACAAAACGTTGGTGGATTTCCTAGAAGGTTA
TCAAGACCCATCAAAACTATCTGTATATCGGGATAGAAGATTTCAGGGAACACAAGATGAATTTGAACAGGCACTACAGACTTCAACCACTGTTTATGTGGGAAATATGT
CCTTTTACACGACGGAAGAGCAAGTTTATGAGCTATTTTCTCGAGCTGGAGAAATTAAGAAGATAATCATGGGTTTGGATAAGAATTCAAAAACACCTTGTGGTTTTTGT
TTTATCCTATACTATTCTCGGGAGGATACTGAGGATGCTGTAAAATTTATAAGTGGAACGATTCTTGATGATCGTCCTATTCGTGTGGATTTTGATTGGGGATTTCAGGA
TGGTAGGCAATGGGGTCGTGGACGAAGTGGTGGACAGGTACTGTTTCTGACCTATGTTACATTCATGACTTGGAGTCTACCATCACTTCCTGTTTATATTTTATTTTGCG
TTTTTCTATACAGAGGTGGCTATGGAAAGTTAGTTCAGAAAGAGTTAGAAGCACAGAGGCAGCTTGTGGATTATGGTACTGGTTCACTAGGCTCTATGCAGCCAGTCATG
CCTCAGTATGGAAAACATGGTGGAAGCCACGGACATGGGCATCGTCATGGTAGAGATTACCACCACCGCAAGCGCTACCGAGATGATGATCGCCATGCCCATGAAAGCTC
TAAGAGAACTTCGGATTATGAGTCTAGAAGAAACCCTGATCACGAATCCAGACCGGAGAAGAATCCAAGGTTTCGGGAGAGTGGCGATTCTGATGAAGAGGATGATGATG
ACCGAAAGCAGCGACATTAA
Protein sequenceShow/hide protein sequence
MQSDLSSSSPKSIENEGCQEQGDGVENKTLVDFLEGYQDPSKLSVYRDRRFQGTQDEFEQALQTSTTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFC
FILYYSREDTEDAVKFISGTILDDRPIRVDFDWGFQDGRQWGRGRSGGQVLFLTYVTFMTWSLPSLPVYILFCVFLYRGGYGKLVQKELEAQRQLVDYGTGSLGSMQPVM
PQYGKHGGSHGHGHRHGRDYHHRKRYRDDDRHAHESSKRTSDYESRRNPDHESRPEKNPRFRESGDSDEEDDDDRKQRH