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Spg028593 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg028593
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionSWIM-type domain-containing protein
Genome locationscaffold7:14757713..14760302
RNA-Seq ExpressionSpg028593
SyntenySpg028593
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_038875109.1 uncharacterized protein LOC120067641 [Benincasa hispida]9.6e-1742.07Show/hide
Query:  LELELQEVVVRESCNLVIVSDRRVSIANAIEVVLLTTFHAFYMWHLEKNLQTKFKDKVVVDLFKHATRAFHLFEFHTYLEQLQGIRGGSVTR--------
        L+ + +  ++ E  NLV VS R VSI N I     TTFH    WHLE+NL T FKD  VV +F++A RAF + EF T L++L   R G VT+        
Subjt:  LELELQEVVVRESCNLVIVSDRRVSIANAIEVVLLTTFHAFYMWHLEKNLQTKFKDKVVVDLFKHATRAFHLFEFHTYLEQLQGIRGGSVTR--------

Query:  -----------------MTTFSNYYENRLASECDKGRRYRVESSD
                          T  S+Y E RLASE DKGR YRVE  D
Subjt:  -----------------MTTFSNYYENRLASECDKGRRYRVESSD

XP_038888768.1 uncharacterized protein LOC120078560 [Benincasa hispida]3.3e-1743.07Show/hide
Query:  VRESCNLVIVSDRRVSIANAIEVVLLTTFHAFYMWHLEKNLQTKFKDKVVVDLFKHATRAFHLFEFHTYLEQLQGIRGGSVT------------------
        + E  NLV VSDR VSI NAI     TTFH    WH+E+NL T FKD  VV +F+ A R FH+ EF    ++L+  R G VT                  
Subjt:  VRESCNLVIVSDRRVSIANAIEVVLLTTFHAFYMWHLEKNLQTKFKDKVVVDLFKHATRAFHLFEFHTYLEQLQGIRGGSVT------------------

Query:  --------RMTTFSNYYENRLASECDKGRRYRVESSD
                RMT  S+Y + RL SE +KGRRYRVE  D
Subjt:  --------RMTTFSNYYENRLASECDKGRRYRVESSD

XP_038891731.1 uncharacterized protein LOC120081127 [Benincasa hispida]2.6e-1441.27Show/hide
Query:  VSIANAIEVVLLTTFHAFYMWHLEKNLQTKFKDKVVVDLFKHATRAFHLFEFHTYLEQLQGIRGGSV-----------------------------TRMT
        VSI+NAI     T FH  + WH+E+NL T FKD  VV +F+ A RAF + EF T  ++L+    G+V                             +R T
Subjt:  VSIANAIEVVLLTTFHAFYMWHLEKNLQTKFKDKVVVDLFKHATRAFHLFEFHTYLEQLQGIRGGSV-----------------------------TRMT

Query:  TFSNYYENRLASECDKGRRYRVESSD
          SNY E RLASE DKGRRYRVE  D
Subjt:  TFSNYYENRLASECDKGRRYRVESSD

XP_038896508.1 uncharacterized protein LOC120084759 [Benincasa hispida]1.4e-1540.88Show/hide
Query:  VRESCNLVIVSDRRVSIANAIEVVLLTTFHAFYMWHLEKNLQTKFKDKVVVDLFKHATRAFHLFEFHTYLEQLQGIRGGSVTR-----------------
        + ES NLV VSDR VSI N I     T F+  Y WH+++NL T FKD +VV +F+   RAF + EF T  ++L   R G+VT+                 
Subjt:  VRESCNLVIVSDRRVSIANAIEVVLLTTFHAFYMWHLEKNLQTKFKDKVVVDLFKHATRAFHLFEFHTYLEQLQGIRGGSVTR-----------------

Query:  ---------MTTFSNYYENRLASECDKGRRYRVESSD
                  T  S+Y E RL SE DKGRRY+VE  D
Subjt:  ---------MTTFSNYYENRLASECDKGRRYRVESSD

XP_038902409.1 uncharacterized protein LOC120089049 [Benincasa hispida]1.5e-1433.52Show/hide
Query:  VRESCNLVIVSDRRVSIANAIEVVLLTTFHAFYMWHLEKNLQTKFKDKVVVDLFKHATRAFHLFEFHTYLEQLQGIRGGSV-------------------
        + E  NLV VSDR VSI NAI VV  TTFH    +HL+ N+ + FK+  +V +FK A RAF + EF  + +QL+ +R G+V                   
Subjt:  VRESCNLVIVSDRRVSIANAIEVVLLTTFHAFYMWHLEKNLQTKFKDKVVVDLFKHATRAFHLFEFHTYLEQLQGIRGGSV-------------------

Query:  -------------------------------------------------TRMTTFSNYYENRLASECDKGRRYRVESSD
                                                         +R T+ S+Y ENRLA+ECDKGRRYRVE  D
Subjt:  -------------------------------------------------TRMTTFSNYYENRLASECDKGRRYRVESSD

TrEMBL top hitse value%identityAlignment
A0A5C7I4U3 Protein FAR1-RELATED SEQUENCE2.0e-0437.14Show/hide
Query:  NLVIVSDRRVSIANAIEVVLLTTFHAFYMWHLEKNLQTKFKDKVVVDLFKHATRAFHLFEFHTYLEQLQG
        +LV +SDR +SIA A   V   + H   M+HL++N++ KFK   V D+F   ++A+ + EF+  + Q++G
Subjt:  NLVIVSDRRVSIANAIEVVLLTTFHAFYMWHLEKNLQTKFKDKVVVDLFKHATRAFHLFEFHTYLEQLQG

A0A5C7IW42 SWIM-type domain-containing protein9.1e-0536.84Show/hide
Query:  VVRESCNLVIVSDRRVSIANAIEVVLLTTFHAFYMWHLEKNLQTKFKDKVVVDLFKHATRAFHLFEFHTYLEQLQG
        ++ E  +LV +SDR  SIA A   V   + H  YM+HL +N++ KFK   V D+F   ++A+ + EF+  + Q++G
Subjt:  VVRESCNLVIVSDRRVSIANAIEVVLLTTFHAFYMWHLEKNLQTKFKDKVVVDLFKHATRAFHLFEFHTYLEQLQG

A0A6D2KMT2 SWIM-type domain-containing protein3.1e-0533.05Show/hide
Query:  LELQEVVVRESCNLVIVSDRRVSIANAIEVVLLTTFHAFYMWHLEKNLQTKFKDKVVVDLFKHATRAFHLFEFHTYLEQLQGIRGGSVTRMTTFSNYYEN
        LE  +  V +S +LV VSDR  SI N +E V     HA  + HL +N+++++K + V +L   A RAF + EF+  + ++Q I  G    +      +  
Subjt:  LELQEVVVRESCNLVIVSDRRVSIANAIEVVLLTTFHAFYMWHLEKNLQTKFKDKVVVDLFKHATRAFHLFEFHTYLEQLQGIRGGSVTRMTTFSNYYEN

Query:  RLASECDKGRRYRVESSD
        R+     KGRRY +  S+
Subjt:  RLASECDKGRRYRVESSD

A0A6J1DMA3 uncharacterized protein LOC1110225143.1e-0531.67Show/hide
Query:  LVIVSDRRVSIANAIEVVLLTTFHAFYMWHLEKNLQTKFKDKVVVDLFKHATRAFHLFEFHTYLEQLQGIRGGSV------------TRMTTFSNYYENR
        LV +SDR VSI NA   +    FHA   +HL  N++++FK+     L++ A  A+   +F  Y  Q+  IR GS+             R       YEN 
Subjt:  LVIVSDRRVSIANAIEVVLLTTFHAFYMWHLEKNLQTKFKDKVVVDLFKHATRAFHLFEFHTYLEQLQGIRGGSV------------TRMTTFSNYYENR

Query:  LASEC---DKGRRYRVESSD
          +     +K RRY V+  D
Subjt:  LASEC---DKGRRYRVESSD

A0A6J1DYC4 uncharacterized protein LOC1110256781.2e-0432.39Show/hide
Query:  NLVIVSDRRVSIANAIEVVLLTTFHAFYMWHLEKNLQTKFKD--KVVVDLFKHATRAFHLFEFHTYLEQLQG-----------------------IRGG-
        NLV VSDR  +I  AI+ V    FH F   H++ NL  KFKD  K V +LF  A +A+    F++   QL+                        IRG  
Subjt:  NLVIVSDRRVSIANAIEVVLLTTFHAFYMWHLEKNLQTKFKD--KVVVDLFKHATRAFHLFEFHTYLEQLQG-----------------------IRGG-

Query:  ----------SVTRMTTFSNYYENRLASECDKGRRYRVESSD
                  + +R TT S+Y EN  A   D  RR+ V++ D
Subjt:  ----------SVTRMTTFSNYYENRLASECDKGRRYRVESSD

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTGCTGGGTGACCTGAGGGAGCAAAATCTGTGCTGCAGCAAAGCTGGGAGCAAAACTGCCACGTCACAGCTCCCTGTTCTATGGCCTGAGAATAGCGGGGAAGACAC
TAGCGGTGGTCCACGACTCGATCGTGCTGAGAAACATCCCACGGAATGCTTGGAATTGGAGCTACAAGAGGTTGTGGTCAGAGAGTCCTGTAATTTGGTGATTGTTTCCG
ACCGAAGGGTATCCATAGCCAACGCCATCGAAGTTGTTCTCCTGACAACATTTCATGCATTCTACATGTGGCATCTGGAAAAGAACCTCCAAACGAAATTCAAGGATAAG
GTCGTAGTTGACCTATTTAAGCATGCAACTAGGGCATTTCATTTGTTCGAGTTCCATACATATTTGGAACAACTCCAGGGCATTCGAGGTGGTTCGGTCACCAGAATGAC
AACTTTCTCGAACTACTATGAGAATCGACTGGCCAGTGAATGCGACAAAGGAAGACGATATCGAGTCGAGTCGAGCGATTGA
mRNA sequenceShow/hide mRNA sequence
ATGTTGCTGGGTGACCTGAGGGAGCAAAATCTGTGCTGCAGCAAAGCTGGGAGCAAAACTGCCACGTCACAGCTCCCTGTTCTATGGCCTGAGAATAGCGGGGAAGACAC
TAGCGGTGGTCCACGACTCGATCGTGCTGAGAAACATCCCACGGAATGCTTGGAATTGGAGCTACAAGAGGTTGTGGTCAGAGAGTCCTGTAATTTGGTGATTGTTTCCG
ACCGAAGGGTATCCATAGCCAACGCCATCGAAGTTGTTCTCCTGACAACATTTCATGCATTCTACATGTGGCATCTGGAAAAGAACCTCCAAACGAAATTCAAGGATAAG
GTCGTAGTTGACCTATTTAAGCATGCAACTAGGGCATTTCATTTGTTCGAGTTCCATACATATTTGGAACAACTCCAGGGCATTCGAGGTGGTTCGGTCACCAGAATGAC
AACTTTCTCGAACTACTATGAGAATCGACTGGCCAGTGAATGCGACAAAGGAAGACGATATCGAGTCGAGTCGAGCGATTGA
Protein sequenceShow/hide protein sequence
MLLGDLREQNLCCSKAGSKTATSQLPVLWPENSGEDTSGGPRLDRAEKHPTECLELELQEVVVRESCNLVIVSDRRVSIANAIEVVLLTTFHAFYMWHLEKNLQTKFKDK
VVVDLFKHATRAFHLFEFHTYLEQLQGIRGGSVTRMTTFSNYYENRLASECDKGRRYRVESSD