; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg028629 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg028629
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionRetrotrans_gag domain-containing protein
Genome locationscaffold7:17636356..17644170
RNA-Seq ExpressionSpg028629
SyntenySpg028629
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_027065314.1 uncharacterized protein LOC113691389 [Coffea arabica]8.3e-1232.86Show/hide
Query:  IEMVESAVQDNLSAPEYPSPPCIINHEEGN----YVSLSEFIFLVPSFCGEPGTGAYFHISEFFLSCSKRKPPEVSEDQFKLRVFPYSLQGKARKWIFSL
        I M  + +   L+A +    P  I     N    +   S  I L+PSF G      Y H+ EF + C+  KP E++E+Q K+R FP+SL+  A+ W++ L
Subjt:  IEMVESAVQDNLSAPEYPSPPCIINHEEGN----YVSLSEFIFLVPSFCGEPGTGAYFHISEFFLSCSKRKPPEVSEDQFKLRVFPYSLQGKARKWIFSL

Query:  PP----------RMLDSANGGDVLATTPDKAWEIIAKLAE
        PP           ++D+A+GG ++  T   AWE+I  +AE
Subjt:  PP----------RMLDSANGGDVLATTPDKAWEIIAKLAE

XP_027077154.1 uncharacterized protein LOC113700925 [Coffea arabica]4.4e-1333.85Show/hide
Query:  MVESAVQDNLSAPEYPSPPCIIN----HEEGNYVSLSEFIFLVPSFCGEPGTGAYFHISEFFLSCSKRKPPEVSEDQFKLRVFPYSLQGKARKWIFSLPP
        M  +     L+AP +      I      EE  +      I L+PSF        Y H+ EF + C+  KPP ++E+Q K+R FP+SL+  A+ W + LPP
Subjt:  MVESAVQDNLSAPEYPSPPCIIN----HEEGNYVSLSEFIFLVPSFCGEPGTGAYFHISEFFLSCSKRKPPEVSEDQFKLRVFPYSLQGKARKWIFSLPP

Query:  --RMLDSANGGDVLATTPDKAWEIIAKLAE
           ++D+A+GG ++  TP  AW++I ++AE
Subjt:  --RMLDSANGGDVLATTPDKAWEIIAKLAE

XP_027083776.1 uncharacterized protein LOC113706086 [Coffea arabica]3.6e-1537.88Show/hide
Query:  IEMVESAVQDNLSAPEYPSPPCIINH----EEGNYVSLSEFIFLVPSFCGEPGTGAYFHISEFFLSCSKRKPPEVSEDQFKLRVFPYSLQGKARKWIFSL
        I M  +     L+APE    P  I      E   +   S  I L+PSF G  G   + H+ EF + CS  KPP V+E+Q +LR FP+SL+  A+ W++ L
Subjt:  IEMVESAVQDNLSAPEYPSPPCIINH----EEGNYVSLSEFIFLVPSFCGEPGTGAYFHISEFFLSCSKRKPPEVSEDQFKLRVFPYSLQGKARKWIFSL

Query:  PP--RMLDSANGGDVLATTPDKAWEIIAKLAE
        P    ++D+A+GG +   TP +AWE+I  +AE
Subjt:  PP--RMLDSANGGDVLATTPDKAWEIIAKLAE

XP_027166238.1 uncharacterized protein LOC113766225 [Coffea eugenioides]4.0e-1432.87Show/hide
Query:  DLLSAWIEMVESAVQDNLSAPEYPSPPCIIN----HEEGNYVSLSEFIFLVPSFCGEPGTGAYFHISEFFLSCSKRKPPEVSEDQFKLRVFPYSLQGKAR
        D +   + M  +     L+AP+    P  I      +  ++   S  I L+PSF G  G   Y H+ EF + C+  KPPE++E+Q K+R FP+SL+   +
Subjt:  DLLSAWIEMVESAVQDNLSAPEYPSPPCIIN----HEEGNYVSLSEFIFLVPSFCGEPGTGAYFHISEFFLSCSKRKPPEVSEDQFKLRVFPYSLQGKAR

Query:  KWIFSLPP-------RMLDSANGGDVLATTPDKAWEIIAKLAE
         W++ LPP        ++D+ANG  ++  TP  AWE+I  + E
Subjt:  KWIFSLPP-------RMLDSANGGDVLATTPDKAWEIIAKLAE

XP_027167366.1 uncharacterized protein LOC113767456 [Coffea eugenioides]6.3e-1232.86Show/hide
Query:  IEMVESAVQDNLSAPEYPSPPCIINHEEGN----YVSLSEFIFLVPSFCGEPGTGAYFHISEFFLSCSKRKPPEVSEDQFKLRVFPYSLQGKARKWIFSL
        I M  + +   L+A +    P  I     N    +   S  I L+PSF G      Y H+ EF + C+  KP E++E+Q K+R FP+SL+  A+ W++ L
Subjt:  IEMVESAVQDNLSAPEYPSPPCIINHEEGN----YVSLSEFIFLVPSFCGEPGTGAYFHISEFFLSCSKRKPPEVSEDQFKLRVFPYSLQGKARKWIFSL

Query:  PP----------RMLDSANGGDVLATTPDKAWEIIAKLAE
        PP           ++D+A+GG ++  T   AWE+I  +AE
Subjt:  PP----------RMLDSANGGDVLATTPDKAWEIIAKLAE

TrEMBL top hitse value%identityAlignment
A0A1U8KUA0 uncharacterized protein LOC1079193272.0e-1129.23Show/hide
Query:  NIRQALDLLSAWIEMVESAVQDNLSAPEYPSPPCIINHEEGNYVSL-SEFIFLVPSFCGEPGTGAYFHISEFFLSCSKRKPPEVSEDQFKLRVFPYSLQG
        N+ +  D+++  ++ + S    NL+A     PP I        + L S F+ L P F G PG   Y HI+EF ++CS  +P  + E+Q KLR FP+SLQG
Subjt:  NIRQALDLLSAWIEMVESAVQDNLSAPEYPSPPCIINHEEGNYVSL-SEFIFLVPSFCGEPGTGAYFHISEFFLSCSKRKPPEVSEDQFKLRVFPYSLQG

Query:  KARKWIFSLPP--------------------------------------------RMLDSANGGDVLATTPDKAWEIIAKLAEVT------RSDL
         A+ W++ +PP                                             M+D+A+GG ++  TP++A  +IA +A+ T      RSDL
Subjt:  KARKWIFSLPP--------------------------------------------RMLDSANGGDVLATTPDKAWEIIAKLAEVT------RSDL

A0A484MVP1 Uncharacterized protein5.2e-1239.22Show/hide
Query:  SEFIFLVPSFCGEPGTGAYFHISEFFLSCSKRKPPEVSEDQFKLRVFPYSLQGKARKWIFSLPPRML-------DSANGGDVLATTPDKAWEIIAKLAEV
        S FI L+P F G PG   + HISEF ++C    P  V++DQ +LR FP+SL  KA+ W++ +P  +L       D+A+GG ++  TP++A E+   +A+ 
Subjt:  SEFIFLVPSFCGEPGTGAYFHISEFFLSCSKRKPPEVSEDQFKLRVFPYSLQGKARKWIFSLPPRML-------DSANGGDVLATTPDKAWEIIAKLAEV

Query:  TR
        T+
Subjt:  TR

A0A6P6SHI9 uncharacterized protein LOC1136913894.0e-1232.86Show/hide
Query:  IEMVESAVQDNLSAPEYPSPPCIINHEEGN----YVSLSEFIFLVPSFCGEPGTGAYFHISEFFLSCSKRKPPEVSEDQFKLRVFPYSLQGKARKWIFSL
        I M  + +   L+A +    P  I     N    +   S  I L+PSF G      Y H+ EF + C+  KP E++E+Q K+R FP+SL+  A+ W++ L
Subjt:  IEMVESAVQDNLSAPEYPSPPCIINHEEGN----YVSLSEFIFLVPSFCGEPGTGAYFHISEFFLSCSKRKPPEVSEDQFKLRVFPYSLQGKARKWIFSL

Query:  PP----------RMLDSANGGDVLATTPDKAWEIIAKLAE
        PP           ++D+A+GG ++  T   AWE+I  +AE
Subjt:  PP----------RMLDSANGGDVLATTPDKAWEIIAKLAE

A0A6P6TF76 uncharacterized protein LOC1137009252.1e-1333.85Show/hide
Query:  MVESAVQDNLSAPEYPSPPCIIN----HEEGNYVSLSEFIFLVPSFCGEPGTGAYFHISEFFLSCSKRKPPEVSEDQFKLRVFPYSLQGKARKWIFSLPP
        M  +     L+AP +      I      EE  +      I L+PSF        Y H+ EF + C+  KPP ++E+Q K+R FP+SL+  A+ W + LPP
Subjt:  MVESAVQDNLSAPEYPSPPCIIN----HEEGNYVSLSEFIFLVPSFCGEPGTGAYFHISEFFLSCSKRKPPEVSEDQFKLRVFPYSLQGKARKWIFSLPP

Query:  --RMLDSANGGDVLATTPDKAWEIIAKLAE
           ++D+A+GG ++  TP  AW++I ++AE
Subjt:  --RMLDSANGGDVLATTPDKAWEIIAKLAE

A0A6P6U0V8 uncharacterized protein LOC1137060861.7e-1537.88Show/hide
Query:  IEMVESAVQDNLSAPEYPSPPCIINH----EEGNYVSLSEFIFLVPSFCGEPGTGAYFHISEFFLSCSKRKPPEVSEDQFKLRVFPYSLQGKARKWIFSL
        I M  +     L+APE    P  I      E   +   S  I L+PSF G  G   + H+ EF + CS  KPP V+E+Q +LR FP+SL+  A+ W++ L
Subjt:  IEMVESAVQDNLSAPEYPSPPCIINH----EEGNYVSLSEFIFLVPSFCGEPGTGAYFHISEFFLSCSKRKPPEVSEDQFKLRVFPYSLQGKARKWIFSL

Query:  PP--RMLDSANGGDVLATTPDKAWEIIAKLAE
        P    ++D+A+GG +   TP +AWE+I  +AE
Subjt:  PP--RMLDSANGGDVLATTPDKAWEIIAKLAE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATGCGACCTACTTTGCGAATAAGGCAAATGACGTGATCCTAGAGCGTTCATGTAAAGACATGCGAGTAGGGGCATCCTGTGTAAAAGATGTTTACACAAGATTGAA
CCGAGAAATAAGTCACTCTTACTTTATAACGCCGTTTACTGTTAAGACTGATTATTTCATGCGATTACTTAGATCCAGTGACAAATATTTACAAGAGCAAACACCTCCTT
GCCAAGGACAAAGAAAGGCACTGAGCTTCATGAATATCCGACAAGCTCTTGATCTTCTGTCCGCTTGGATAGAAATGGTTGAGAGTGCAGTGCAAGATAACCTTTCAGCT
CCTGAATATCCATCACCCCCTTGCATCATAAATCACGAAGAAGGTAATTATGTCTCCCTATCTGAATTTATTTTCTTAGTTCCTTCCTTTTGTGGTGAGCCAGGAACAGG
TGCTTACTTTCACATATCCGAGTTCTTCTTGAGCTGTTCCAAAAGGAAACCCCCAGAGGTATCTGAAGATCAATTCAAGTTGAGGGTGTTTCCGTACTCACTGCAAGGAA
AAGCTAGGAAGTGGATTTTCTCGTTGCCTCCAAGAATGCTCGACTCAGCTAATGGAGGTGATGTGCTTGCTACGACACCCGATAAGGCGTGGGAGATTATTGCAAAGCTG
GCAGAAGTCACTAGGTCTGATTTAATTAGCATTTCAAGTATGTTAGGAGAGTTAAAGCTTAGGAATGCTAAGCTAAACTCTGGTTATTATGCACCTAATTCCTTTACGCC
TGATGTCCCTGCTTCTTTAGAGCATGATTTAGGCCTAGATAATCAAGTGGCTAACCAAGTTAAGCCTATGGTGCTTAGAATTAGCTTTAATTGGGCGGATGAGGATATAC
TGCTTAAAATTACTTATGATGTGCATTGTGTGTGCAAGTTGAGTTTTCCTGTGCAGGAGCCGATAAAGAGAAAGAAGAGAGATCCTTTGCGGATCAAAGAGGGGCAAGAC
CGAATGGGGGCTGGGAACATAACAATACAAGATGGAATTCACTCCTTCCCCTATTGGGGACCCCTGGGGTGGGGTGAAAGACATCCCATTCATTCTCCTACTCTCAGAGA
ATTCCCCTCAAGGCTTCCTCTAGACTCCCACCAGTCTCCTGCCTCTAGAAGTCTCAGAGTCATACCGGTTCCATGGGATGCTGAGACGGTGAAAAGACCTAAGTGGAGTG
CTCGGAACTTGGAAACGACACCAAATGAATCAAGTTTTGAAGCAGCCAAACCAGGTGGACCCGAGAGGTTGCGTCTCGACGCCTCGGAAGCAGAGGGCCAGCATCACCGT
TGGCGTCTCGATGCCAGTTCGATTATCTAA
mRNA sequenceShow/hide mRNA sequence
ATGGATGCGACCTACTTTGCGAATAAGGCAAATGACGTGATCCTAGAGCGTTCATGTAAAGACATGCGAGTAGGGGCATCCTGTGTAAAAGATGTTTACACAAGATTGAA
CCGAGAAATAAGTCACTCTTACTTTATAACGCCGTTTACTGTTAAGACTGATTATTTCATGCGATTACTTAGATCCAGTGACAAATATTTACAAGAGCAAACACCTCCTT
GCCAAGGACAAAGAAAGGCACTGAGCTTCATGAATATCCGACAAGCTCTTGATCTTCTGTCCGCTTGGATAGAAATGGTTGAGAGTGCAGTGCAAGATAACCTTTCAGCT
CCTGAATATCCATCACCCCCTTGCATCATAAATCACGAAGAAGGTAATTATGTCTCCCTATCTGAATTTATTTTCTTAGTTCCTTCCTTTTGTGGTGAGCCAGGAACAGG
TGCTTACTTTCACATATCCGAGTTCTTCTTGAGCTGTTCCAAAAGGAAACCCCCAGAGGTATCTGAAGATCAATTCAAGTTGAGGGTGTTTCCGTACTCACTGCAAGGAA
AAGCTAGGAAGTGGATTTTCTCGTTGCCTCCAAGAATGCTCGACTCAGCTAATGGAGGTGATGTGCTTGCTACGACACCCGATAAGGCGTGGGAGATTATTGCAAAGCTG
GCAGAAGTCACTAGGTCTGATTTAATTAGCATTTCAAGTATGTTAGGAGAGTTAAAGCTTAGGAATGCTAAGCTAAACTCTGGTTATTATGCACCTAATTCCTTTACGCC
TGATGTCCCTGCTTCTTTAGAGCATGATTTAGGCCTAGATAATCAAGTGGCTAACCAAGTTAAGCCTATGGTGCTTAGAATTAGCTTTAATTGGGCGGATGAGGATATAC
TGCTTAAAATTACTTATGATGTGCATTGTGTGTGCAAGTTGAGTTTTCCTGTGCAGGAGCCGATAAAGAGAAAGAAGAGAGATCCTTTGCGGATCAAAGAGGGGCAAGAC
CGAATGGGGGCTGGGAACATAACAATACAAGATGGAATTCACTCCTTCCCCTATTGGGGACCCCTGGGGTGGGGTGAAAGACATCCCATTCATTCTCCTACTCTCAGAGA
ATTCCCCTCAAGGCTTCCTCTAGACTCCCACCAGTCTCCTGCCTCTAGAAGTCTCAGAGTCATACCGGTTCCATGGGATGCTGAGACGGTGAAAAGACCTAAGTGGAGTG
CTCGGAACTTGGAAACGACACCAAATGAATCAAGTTTTGAAGCAGCCAAACCAGGTGGACCCGAGAGGTTGCGTCTCGACGCCTCGGAAGCAGAGGGCCAGCATCACCGT
TGGCGTCTCGATGCCAGTTCGATTATCTAA
Protein sequenceShow/hide protein sequence
MDATYFANKANDVILERSCKDMRVGASCVKDVYTRLNREISHSYFITPFTVKTDYFMRLLRSSDKYLQEQTPPCQGQRKALSFMNIRQALDLLSAWIEMVESAVQDNLSA
PEYPSPPCIINHEEGNYVSLSEFIFLVPSFCGEPGTGAYFHISEFFLSCSKRKPPEVSEDQFKLRVFPYSLQGKARKWIFSLPPRMLDSANGGDVLATTPDKAWEIIAKL
AEVTRSDLISISSMLGELKLRNAKLNSGYYAPNSFTPDVPASLEHDLGLDNQVANQVKPMVLRISFNWADEDILLKITYDVHCVCKLSFPVQEPIKRKKRDPLRIKEGQD
RMGAGNITIQDGIHSFPYWGPLGWGERHPIHSPTLREFPSRLPLDSHQSPASRSLRVIPVPWDAETVKRPKWSARNLETTPNESSFEAAKPGGPERLRLDASEAEGQHHR
WRLDASSII