; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg028636 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg028636
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
Description40S ribosomal protein S26
Genome locationscaffold7:11447654..11453245
RNA-Seq ExpressionSpg028636
SyntenySpg028636
Gene Ontology termsGO:0006412 - translation (biological process)
GO:0019430 - removal of superoxide radicals (biological process)
GO:0016021 - integral component of membrane (cellular component)
GO:0022627 - cytosolic small ribosomal subunit (cellular component)
GO:0003729 - mRNA binding (molecular function)
GO:0003735 - structural constituent of ribosome (molecular function)
GO:0004784 - superoxide dismutase activity (molecular function)
GO:0046872 - metal ion binding (molecular function)
InterPro domainsIPR000892 - Ribosomal protein S26e
IPR038551 - Ribosomal protein S26e superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
GAV62493.1 LOW QUALITY PROTEIN: Sod_Fe_N domain-containing protein/Ribosomal_S26e domain-containing protein/Sod_Fe_C domain-containing protein [Cephalotus follicularis]3.5e-6583.23Show/hide
Query:  IFTTFGWTRQMNCSRISA-GCVAPFTTNTFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQY
        I+    W   M C R+ A    A     TFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQY
Subjt:  IFTTFGWTRQMNCSRISA-GCVAPFTTNTFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQY

Query:  CVSCAIHSHVVRVRSRTDRRNRQPPQRFLRRRDDQPKPGQPGQAPRPVGAGNPAR
        CVSCAIHSHVVRVRSRTDRRNR+PPQRF+RRRDD PKPGQPGQAPRP GAGNP R
Subjt:  CVSCAIHSHVVRVRSRTDRRNRQPPQRFLRRRDDQPKPGQPGQAPRPVGAGNPAR

XP_004146441.1 40S ribosomal protein S26-1 [Cucumis sativus]4.6e-6597.66Show/hide
Query:  TFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRNRQPPQRF
        TFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRNRQPPQRF
Subjt:  TFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRNRQPPQRF

Query:  LRRRDDQPKPGQPGQAPRPVGAGNPARV
        +RRR+DQ KPGQPGQAPRPVGAGNPARV
Subjt:  LRRRDDQPKPGQPGQAPRPVGAGNPARV

XP_022941874.1 40S ribosomal protein S26-3-like [Cucurbita moschata]4.6e-6597.71Show/hide
Query:  TFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRNRQPPQRF
        TFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRNRQPPQRF
Subjt:  TFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRNRQPPQRF

Query:  LRRRDDQPK---PGQPGQAPRPVGAGNPARV
        LRRRDDQPK   PGQPGQAPRPVGAGNPARV
Subjt:  LRRRDDQPK---PGQPGQAPRPVGAGNPARV

XP_022943123.1 40S ribosomal protein S26-1-like [Cucurbita moschata]6.0e-6597.66Show/hide
Query:  TFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRNRQPPQRF
        TFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRNRQPPQRF
Subjt:  TFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRNRQPPQRF

Query:  LRRRDDQPKPGQPGQAPRPVGAGNPARV
        +RRRDDQPKPGQPGQAPRP GAG PARV
Subjt:  LRRRDDQPKPGQPGQAPRPVGAGNPARV

XP_023529394.1 40S ribosomal protein S26-1-like [Cucurbita pepo subsp. pepo]6.0e-6597.66Show/hide
Query:  TFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRNRQPPQRF
        TFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRNRQPPQRF
Subjt:  TFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRNRQPPQRF

Query:  LRRRDDQPKPGQPGQAPRPVGAGNPARV
        +RRRDDQPKPGQPGQAPRP GAG PARV
Subjt:  LRRRDDQPKPGQPGQAPRPVGAGNPARV

TrEMBL top hitse value%identityAlignment
A0A0A0KM45 40S ribosomal protein S262.2e-6597.66Show/hide
Query:  TFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRNRQPPQRF
        TFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRNRQPPQRF
Subjt:  TFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRNRQPPQRF

Query:  LRRRDDQPKPGQPGQAPRPVGAGNPARV
        +RRR+DQ KPGQPGQAPRPVGAGNPARV
Subjt:  LRRRDDQPKPGQPGQAPRPVGAGNPARV

A0A1Q3B3V8 Superoxide dismutase1.7e-6583.23Show/hide
Query:  IFTTFGWTRQMNCSRISA-GCVAPFTTNTFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQY
        I+    W   M C R+ A    A     TFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQY
Subjt:  IFTTFGWTRQMNCSRISA-GCVAPFTTNTFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQY

Query:  CVSCAIHSHVVRVRSRTDRRNRQPPQRFLRRRDDQPKPGQPGQAPRPVGAGNPAR
        CVSCAIHSHVVRVRSRTDRRNR+PPQRF+RRRDD PKPGQPGQAPRP GAGNP R
Subjt:  CVSCAIHSHVVRVRSRTDRRNRQPPQRFLRRRDDQPKPGQPGQAPRPVGAGNPAR

A0A1S3C5M1 40S ribosomal protein S262.2e-6597.66Show/hide
Query:  TFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRNRQPPQRF
        TFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRNRQPPQRF
Subjt:  TFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRNRQPPQRF

Query:  LRRRDDQPKPGQPGQAPRPVGAGNPARV
        +RRR+DQ KPGQPGQAPRPVGAGNPARV
Subjt:  LRRRDDQPKPGQPGQAPRPVGAGNPARV

A0A5A7VIJ0 40S ribosomal protein S262.2e-6597.66Show/hide
Query:  TFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRNRQPPQRF
        TFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRNRQPPQRF
Subjt:  TFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRNRQPPQRF

Query:  LRRRDDQPKPGQPGQAPRPVGAGNPARV
        +RRR+DQ KPGQPGQAPRPVGAGNPARV
Subjt:  LRRRDDQPKPGQPGQAPRPVGAGNPARV

A0A6J1FPQ0 40S ribosomal protein S262.2e-6597.71Show/hide
Query:  TFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRNRQPPQRF
        TFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRNRQPPQRF
Subjt:  TFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRNRQPPQRF

Query:  LRRRDDQPK---PGQPGQAPRPVGAGNPARV
        LRRRDDQPK   PGQPGQAPRPVGAGNPARV
Subjt:  LRRRDDQPK---PGQPGQAPRPVGAGNPARV

SwissProt top hitse value%identityAlignment
O45499 40S ribosomal protein S265.5e-3767.23Show/hide
Query:  TFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRNRQPPQRF
        TFKRRN GRNK  RGHV FIRC+NCG+CCPKDKAIK+F+VRNIVE AAVRD+ +A  Y QY LPKLY K+ YC++CAIHS VVR RSR  RR+R PP RF
Subjt:  TFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRNRQPPQRF

Query:  LRRRDDQPKPGQPGQAPRP
          +R    +PG PG  PRP
Subjt:  LRRRDDQPKPGQPGQAPRP

P49206 40S ribosomal protein S26-11.7e-5483.33Show/hide
Query:  TFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRNRQPPQRF
        TFKRRNGGRNKH RGHV  IRCSNCGKCCPKDKAIKRF+VRNIVEQAA+RDVQEA VY+ YTLPKLYAK QYCVSCAIHSHVVRVRSRT+RR R PP RF
Subjt:  TFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRNRQPPQRF

Query:  LRRRDDQPKPGQPGQAPRPVGAGNPA
         RR++D PKPGQPGQAPRP G G  A
Subjt:  LRRRDDQPKPGQPGQAPRPVGAGNPA

P49216 40S ribosomal protein S261.1e-4876.38Show/hide
Query:  TFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRNRQPPQRF
        TFKRRNGGRNKHGRGHVK+IRCSNC KCCPKDKAIKRF VRNIVEQAA+RDVQEACV+D Y LPKLYAK+ +CVSCAIH+H+VRVRSR +RR+R+PP+RF
Subjt:  TFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRNRQPPQRF

Query:  LRRRDDQPKPGQP-GQAPRPVGAGNPA
         RRR+D+P+  +P G AP P GA  PA
Subjt:  LRRRDDQPKPGQP-GQAPRPVGAGNPA

Q8LPJ7 40S ribosomal protein S26-21.7e-5483.33Show/hide
Query:  TFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRNRQPPQRF
        TFKRRNGGRNKH RGHV  IRCSNCGKCCPKDKAIKRF+VRNIVEQAA+RDVQEA VY+ YTLPKLYAK QYCVSCAIHSHVVRVRSRT+RR R PP RF
Subjt:  TFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRNRQPPQRF

Query:  LRRRDDQPKPGQPGQAPRPVGAGNPA
         RR++D PKPGQPGQAPRP G G  A
Subjt:  LRRRDDQPKPGQPGQAPRPVGAGNPA

Q9LYK9 40S ribosomal protein S26-35.0e-5484.13Show/hide
Query:  TFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRNRQPPQRF
        TFKRRNGGRNKH RGHVK IRCSNCGKCCPKDKAIKRF+VRNIVEQAA+RDVQEA VY+ YTLPKLYAK QYCVSCAIHSHVVRVRSRT+RR R PP RF
Subjt:  TFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRNRQPPQRF

Query:  LRRRDDQPKPGQPGQAPRPVGAGNPA
         RR++D PKP QPGQAPRP G G PA
Subjt:  LRRRDDQPKPGQPGQAPRPVGAGNPA

Arabidopsis top hitse value%identityAlignment
AT2G40510.1 Ribosomal protein S26e family protein1.2e-5583.33Show/hide
Query:  TFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRNRQPPQRF
        TFKRRNGGRNKH RGHV  IRCSNCGKCCPKDKAIKRF+VRNIVEQAA+RDVQEA VY+ YTLPKLYAK QYCVSCAIHSHVVRVRSRT+RR R PP RF
Subjt:  TFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRNRQPPQRF

Query:  LRRRDDQPKPGQPGQAPRPVGAGNPA
         RR++D PKPGQPGQAPRP G G  A
Subjt:  LRRRDDQPKPGQPGQAPRPVGAGNPA

AT2G40590.1 Ribosomal protein S26e family protein1.2e-5583.33Show/hide
Query:  TFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRNRQPPQRF
        TFKRRNGGRNKH RGHV  IRCSNCGKCCPKDKAIKRF+VRNIVEQAA+RDVQEA VY+ YTLPKLYAK QYCVSCAIHSHVVRVRSRT+RR R PP RF
Subjt:  TFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRNRQPPQRF

Query:  LRRRDDQPKPGQPGQAPRPVGAGNPA
         RR++D PKPGQPGQAPRP G G  A
Subjt:  LRRRDDQPKPGQPGQAPRPVGAGNPA

AT3G56340.1 Ribosomal protein S26e family protein3.5e-5584.13Show/hide
Query:  TFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRNRQPPQRF
        TFKRRNGGRNKH RGHVK IRCSNCGKCCPKDKAIKRF+VRNIVEQAA+RDVQEA VY+ YTLPKLYAK QYCVSCAIHSHVVRVRSRT+RR R PP RF
Subjt:  TFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRNRQPPQRF

Query:  LRRRDDQPKPGQPGQAPRPVGAGNPA
         RR++D PKP QPGQAPRP G G PA
Subjt:  LRRRDDQPKPGQPGQAPRPVGAGNPA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACAGGCGCACCTAGGTGTGCAAAGGCGTGCCCAGGCGAGCGCCCGATTGAAGGCACTCGCCTGGGCACTCTGTGCACTTCGTCCTTTATTCTTCTGATATTTACAAC
GTTTGGTTGGACAAGGCAAATGAATTGCTCAAGAATTAGTGCAGGCTGCGTTGCACCATTTACCACAAATACTTTCAAGCGCAGGAACGGCGGACGTAACAAGCATGGCC
GTGGACACGTTAAGTTCATCCGGTGCTCCAACTGCGGCAAGTGCTGCCCCAAGGACAAGGCTATTAAGAGGTTTCTTGTGAGGAATATTGTGGAGCAGGCTGCTGTTAGG
GATGTTCAAGAAGCCTGTGTCTATGACCAATATACCCTCCCTAAGCTCTATGCTAAGATGCAGTACTGTGTTTCCTGTGCTATTCACTCACATGTTGTGAGAGTTCGATC
TCGTACTGATAGAAGAAATAGGCAACCACCACAGCGCTTCCTCAGACGCAGGGATGATCAGCCGAAGCCTGGTCAGCCAGGTCAAGCACCTCGCCCTGTTGGAGCTGGAA
ATCCTGCTCGTGTATAA
mRNA sequenceShow/hide mRNA sequence
ATGACAGGCGCACCTAGGTGTGCAAAGGCGTGCCCAGGCGAGCGCCCGATTGAAGGCACTCGCCTGGGCACTCTGTGCACTTCGTCCTTTATTCTTCTGATATTTACAAC
GTTTGGTTGGACAAGGCAAATGAATTGCTCAAGAATTAGTGCAGGCTGCGTTGCACCATTTACCACAAATACTTTCAAGCGCAGGAACGGCGGACGTAACAAGCATGGCC
GTGGACACGTTAAGTTCATCCGGTGCTCCAACTGCGGCAAGTGCTGCCCCAAGGACAAGGCTATTAAGAGGTTTCTTGTGAGGAATATTGTGGAGCAGGCTGCTGTTAGG
GATGTTCAAGAAGCCTGTGTCTATGACCAATATACCCTCCCTAAGCTCTATGCTAAGATGCAGTACTGTGTTTCCTGTGCTATTCACTCACATGTTGTGAGAGTTCGATC
TCGTACTGATAGAAGAAATAGGCAACCACCACAGCGCTTCCTCAGACGCAGGGATGATCAGCCGAAGCCTGGTCAGCCAGGTCAAGCACCTCGCCCTGTTGGAGCTGGAA
ATCCTGCTCGTGTATAA
Protein sequenceShow/hide protein sequence
MTGAPRCAKACPGERPIEGTRLGTLCTSSFILLIFTTFGWTRQMNCSRISAGCVAPFTTNTFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVR
DVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRNRQPPQRFLRRRDDQPKPGQPGQAPRPVGAGNPARV