; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg028661 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg028661
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionSWIM-type domain-containing protein
Genome locationscaffold7:12983242..12992160
RNA-Seq ExpressionSpg028661
SyntenySpg028661
Gene Ontology termsNA
InterPro domainsIPR004332 - Transposase, MuDR, plant


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF3957745.1 hypothetical protein CMV_017272 [Castanea mollissima]3.5e-2847.41Show/hide
Query:  DDESDIDSSELNSLSNSSNSEVGNKPKYPVFKEVMGDGMPRFELGMLFNSLNEFKNVVPDYAVKGGWQVRFVKKDKLRVRAKCADGCKWVAYVSKIQGEM
        D++   +S EL S+ +  ++     P YPVF          F  GMLF SL +FKNVV DYAV GGW +RF K DK+RVRA C DGCKW+AYV+K++ +M
Subjt:  DDESDIDSSELNSLSNSSNSEVGNKPKYPVFKEVMGDGMPRFELGMLFNSLNEFKNVVPDYAVKGGWQVRFVKKDKLRVRAKCADGCKWVAYVSKIQGEM

Query:  TYQLKTLIDKHSCSRSFKNPCLTSKWLSKPITNDV
        T+Q++T   +H+C+R+FKN   TSKWL K + +++
Subjt:  TYQLKTLIDKHSCSRSFKNPCLTSKWLSKPITNDV

XP_022153708.1 uncharacterized protein LOC111021158 [Momordica charantia]2.1e-4969.18Show/hide
Query:  IDDISSIRMWDDESDIDSSELNSLSNSSNSEVGNKPKYPVFKEVMGDGMPRFELGMLFNSLNEFKNVVPDYAVKGGWQVRFVKKDKLRVRAKCADGCKWV
        IDD  ++   D  SDIDSSEL SL +SS+SEV  + KYPV++E  GD  P FELGM FNSL EFKNVV DYAVKGGWQ+RFVK DK RVRAKC DGCKW+
Subjt:  IDDISSIRMWDDESDIDSSELNSLSNSSNSEVGNKPKYPVFKEVMGDGMPRFELGMLFNSLNEFKNVVPDYAVKGGWQVRFVKKDKLRVRAKCADGCKWV

Query:  AYVSKIQGEMTYQLKTLIDKHSCSRSFKNPCLTSKWLSKPITNDVK
        AYV+K+QGEMTYQLKT + +HSCSRSF NP LTS+WL + I NDVK
Subjt:  AYVSKIQGEMTYQLKTLIDKHSCSRSFKNPCLTSKWLSKPITNDVK

XP_023873370.1 uncharacterized protein LOC111985960 [Quercus suber]4.5e-2340.41Show/hide
Query:  IDDISSIRMWDDESDIDSSELNSLSNSSNSEVGNKPKYPVFKEVMGDGMPRFELGMLFNSLNEFKNVVPDYAVKGGWQVRFVKKDKLRVRAKCADGCKWV
        +D+ SS     D+S  D   +  + NS       + KYP+F+ V      RFE  MLF S  +FK+ + DY + GGW ++FVK D +RVRA+C  GCK+V
Subjt:  IDDISSIRMWDDESDIDSSELNSLSNSSNSEVGNKPKYPVFKEVMGDGMPRFELGMLFNSLNEFKNVVPDYAVKGGWQVRFVKKDKLRVRAKCADGCKWV

Query:  AYVSKIQGEMTYQLKTLIDKHSCSRSFKNPCLTSKWLSKPITNDVK
        AY++K+  E +++LKTL  +H+CSRS+KNP  T+ ++ K +   V+
Subjt:  AYVSKIQGEMTYQLKTLIDKHSCSRSFKNPCLTSKWLSKPITNDVK

XP_023896782.1 uncharacterized protein LOC112008678 [Quercus suber]3.3e-2645.16Show/hide
Query:  SDIDSSELNSLSNSSNS----------------------EVGNKPKYPVFKEVMGDGMPRFELGMLFNSLNEFKNVVPDYAVKGGWQVRFVKKDKLRVRA
        SD  S EL SL+ SS+S                       V N+ K+PVFK+V      RFE  MLF S  +FK+ + +YAV GGW V+FVK DKLRVRA
Subjt:  SDIDSSELNSLSNSSNS----------------------EVGNKPKYPVFKEVMGDGMPRFELGMLFNSLNEFKNVVPDYAVKGGWQVRFVKKDKLRVRA

Query:  KCADGCKWVAYVSKIQGEMTYQLKTLIDKHSCSRSFKNPCLTSKWLSKPITNDVK
        KC   CK+ AY++K+  EM+YQLKTL  +H+C+RS+KNP  T+K+L++ +   V+
Subjt:  KCADGCKWVAYVSKIQGEMTYQLKTLIDKHSCSRSFKNPCLTSKWLSKPITNDVK

XP_023914573.1 uncharacterized protein LOC112026126 [Quercus suber]6.9e-2443.71Show/hide
Query:  SDIDSSELNSLSNSSNS---------------EVGN---KPKYPVFKEVMGDGMPRFELGMLFNSLNEFKNVVPDYAVKGGWQVRFVKKDKLRVRAKCAD
        SD +S EL SL  SS+S               EV N   K KYP+F+ V      RFE  MLF S  +FK+ + DYAV GGW ++FVK D +RVRA+C  
Subjt:  SDIDSSELNSLSNSSNS---------------EVGN---KPKYPVFKEVMGDGMPRFELGMLFNSLNEFKNVVPDYAVKGGWQVRFVKKDKLRVRAKCAD

Query:  GCKWVAYVSKIQGEMTYQLKTLIDKHSCSRSFKNPCLTSKWLSKPITNDVK
        GC +VAY++K+  E +++LKTL  +H+CSRS+KNP  T+ ++ K +   V+
Subjt:  GCKWVAYVSKIQGEMTYQLKTLIDKHSCSRSFKNPCLTSKWLSKPITNDVK

TrEMBL top hitse value%identityAlignment
A0A2N9EMB4 SWIM-type domain-containing protein2.2e-2851.88Show/hide
Query:  SDIDSSELN-SLSNSSNSEVGNKPKYPVFKEVMGDGMPRFELGMLFNSLNEFKNVVPDYAVKGGWQVRFVKKDKLRVRAKCADGCKWVAYVSKIQGEMTY
        SD D + L+  L +  + +V  +P+YPV+K        +FE+GM FNSL EFKN V DYAV GG  +RF K DK+RVRA C  GCKWVAY  K+ GEMT 
Subjt:  SDIDSSELN-SLSNSSNSEVGNKPKYPVFKEVMGDGMPRFELGMLFNSLNEFKNVVPDYAVKGGWQVRFVKKDKLRVRAKCADGCKWVAYVSKIQGEMTY

Query:  QLKTLIDKHSCSRSFKNPCLTSKWLSKPITNDV
        QL+T +++H+CSRS+ N   TSKWL K +TN +
Subjt:  QLKTLIDKHSCSRSFKNPCLTSKWLSKPITNDV

A0A2N9EQ17 CCHC-type domain-containing protein5.9e-2951.85Show/hide
Query:  DDESDIDSSELNSLSNSSNSEVGNKPKYPVFKEVMGDGMPRFELGMLFNSLNEFKNVVPDYAVKGGWQVRFVKKDKLRVRAKCADGCKWVAYVSKIQGEM
        D+E    S EL S+ +        +P+YPV+K        +FE+GM FNSL EFKN V DYAV GG  +RF K DK+RVRA C  GCKWVAY  K+ GEM
Subjt:  DDESDIDSSELNSLSNSSNSEVGNKPKYPVFKEVMGDGMPRFELGMLFNSLNEFKNVVPDYAVKGGWQVRFVKKDKLRVRAKCADGCKWVAYVSKIQGEM

Query:  TYQLKTLIDKHSCSRSFKNPCLTSKWLSKPITNDV
        T QL+TL+++H+CSRS+ N   TSKWL K +TN +
Subjt:  TYQLKTLIDKHSCSRSFKNPCLTSKWLSKPITNDV

A0A2N9ES33 Uncharacterized protein2.2e-2843.45Show/hide
Query:  EVHHSGYFIDDISSIRMWDDESDIDSSELNSLSNS----SNSEV----------GNKPKYPVFKEVMGDGMPRFELGMLFNSLNEFKNVVPDYAVKGGWQ
        EV  +G    D  S  ++ D   +  SE  S  N+    +N++V            +P +P+F+ V      RFELGMLF S  +FK  + +YAV+GGW 
Subjt:  EVHHSGYFIDDISSIRMWDDESDIDSSELNSLSNS----SNSEV----------GNKPKYPVFKEVMGDGMPRFELGMLFNSLNEFKNVVPDYAVKGGWQ

Query:  VRFVKKDKLRVRAKCADGCKWVAYVSKIQGEMTYQLKTLIDKHSCSRSFKNPCLTSKWLSKPITNDVK
        +RFVK DK+RVRA C +GCK+VAY++K+  E+T+QLKTL  +HSCSR FKNP +T+K+L+K +   VK
Subjt:  VRFVKKDKLRVRAKCADGCKWVAYVSKIQGEMTYQLKTLIDKHSCSRSFKNPCLTSKWLSKPITNDVK

A0A2N9HUS0 Uncharacterized protein2.2e-2851.88Show/hide
Query:  SDIDSSELN-SLSNSSNSEVGNKPKYPVFKEVMGDGMPRFELGMLFNSLNEFKNVVPDYAVKGGWQVRFVKKDKLRVRAKCADGCKWVAYVSKIQGEMTY
        SD D + L+  L +  + +V  +P+YPV+K        +FE+GM FNSL EFKN V DYAV GG  +RF K DK+RVRA C  GCKWVAY  K+ GEMT 
Subjt:  SDIDSSELN-SLSNSSNSEVGNKPKYPVFKEVMGDGMPRFELGMLFNSLNEFKNVVPDYAVKGGWQVRFVKKDKLRVRAKCADGCKWVAYVSKIQGEMTY

Query:  QLKTLIDKHSCSRSFKNPCLTSKWLSKPITNDV
        QL+T +++H+CSRS+ N   TSKWL K +TN +
Subjt:  QLKTLIDKHSCSRSFKNPCLTSKWLSKPITNDV

A0A6J1DI69 uncharacterized protein LOC1110211581.0e-4969.18Show/hide
Query:  IDDISSIRMWDDESDIDSSELNSLSNSSNSEVGNKPKYPVFKEVMGDGMPRFELGMLFNSLNEFKNVVPDYAVKGGWQVRFVKKDKLRVRAKCADGCKWV
        IDD  ++   D  SDIDSSEL SL +SS+SEV  + KYPV++E  GD  P FELGM FNSL EFKNVV DYAVKGGWQ+RFVK DK RVRAKC DGCKW+
Subjt:  IDDISSIRMWDDESDIDSSELNSLSNSSNSEVGNKPKYPVFKEVMGDGMPRFELGMLFNSLNEFKNVVPDYAVKGGWQVRFVKKDKLRVRAKCADGCKWV

Query:  AYVSKIQGEMTYQLKTLIDKHSCSRSFKNPCLTSKWLSKPITNDVK
        AYV+K+QGEMTYQLKT + +HSCSRSF NP LTS+WL + I NDVK
Subjt:  AYVSKIQGEMTYQLKTLIDKHSCSRSFKNPCLTSKWLSKPITNDVK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCAACCTCTTATGTACCATACCATTTTTTGACCTTGAACGGGGGTCCTCCTTATGATGCTACGTACAACTGTCTAAAGTGCAAGGGTAAACTCAAACTCAAACAGGA
TAGGATTGTGCGTGCTAGACCCTTTTGGTGTCGTATTTTGGCCAAGTGGCAAAAAGAGACGCTTTTTGCTATTGAGAAAGCGAACAGTCAGCACAAAGGGATGGCCACAT
TTGTGGTAGAGGTGCATCATAGTGGTTACTTCATAGATGACATATCTTCAATACGTATGTGGGATGATGAAAGTGACATCGACTCCAGCGAGCTAAACTCATTGAGCAAT
TCATCCAATTCTGAAGTTGGCAATAAACCAAAATATCCTGTTTTTAAAGAAGTAATGGGTGATGGGATGCCACGCTTTGAATTAGGAATGTTATTTAACTCTTTAAATGA
GTTCAAGAATGTTGTGCCAGATTACGCTGTTAAAGGGGGATGGCAAGTACGATTTGTAAAAAAGGATAAGTTGAGAGTTCGAGCCAAATGTGCAGATGGTTGTAAATGGG
TGGCTTATGTTTCTAAGATTCAAGGAGAGATGACTTATCAATTGAAGACTTTAATTGACAAACACTCCTGTAGTAGATCCTTCAAGAATCCATGTCTAACTTCTAAGTGG
CTTAGCAAGCCAATAACAAATGATGTAAAGGGAGCAACCAAATATGAGATCGAGTGCCATCTAGGACAAGATACAACGTACTTATATTTCACAGATTAG
mRNA sequenceShow/hide mRNA sequence
ATGCCAACCTCTTATGTACCATACCATTTTTTGACCTTGAACGGGGGTCCTCCTTATGATGCTACGTACAACTGTCTAAAGTGCAAGGGTAAACTCAAACTCAAACAGGA
TAGGATTGTGCGTGCTAGACCCTTTTGGTGTCGTATTTTGGCCAAGTGGCAAAAAGAGACGCTTTTTGCTATTGAGAAAGCGAACAGTCAGCACAAAGGGATGGCCACAT
TTGTGGTAGAGGTGCATCATAGTGGTTACTTCATAGATGACATATCTTCAATACGTATGTGGGATGATGAAAGTGACATCGACTCCAGCGAGCTAAACTCATTGAGCAAT
TCATCCAATTCTGAAGTTGGCAATAAACCAAAATATCCTGTTTTTAAAGAAGTAATGGGTGATGGGATGCCACGCTTTGAATTAGGAATGTTATTTAACTCTTTAAATGA
GTTCAAGAATGTTGTGCCAGATTACGCTGTTAAAGGGGGATGGCAAGTACGATTTGTAAAAAAGGATAAGTTGAGAGTTCGAGCCAAATGTGCAGATGGTTGTAAATGGG
TGGCTTATGTTTCTAAGATTCAAGGAGAGATGACTTATCAATTGAAGACTTTAATTGACAAACACTCCTGTAGTAGATCCTTCAAGAATCCATGTCTAACTTCTAAGTGG
CTTAGCAAGCCAATAACAAATGATGTAAAGGGAGCAACCAAATATGAGATCGAGTGCCATCTAGGACAAGATACAACGTACTTATATTTCACAGATTAG
Protein sequenceShow/hide protein sequence
MPTSYVPYHFLTLNGGPPYDATYNCLKCKGKLKLKQDRIVRARPFWCRILAKWQKETLFAIEKANSQHKGMATFVVEVHHSGYFIDDISSIRMWDDESDIDSSELNSLSN
SSNSEVGNKPKYPVFKEVMGDGMPRFELGMLFNSLNEFKNVVPDYAVKGGWQVRFVKKDKLRVRAKCADGCKWVAYVSKIQGEMTYQLKTLIDKHSCSRSFKNPCLTSKW
LSKPITNDVKGATKYEIECHLGQDTTYLYFTD