; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg028708 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg028708
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionRibonuclease H
Genome locationscaffold7:12544206..12548487
RNA-Seq ExpressionSpg028708
SyntenySpg028708
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022155873.1 uncharacterized protein LOC111022886 [Momordica charantia]4.0e-0952.46Show/hide
Query:  LKKFERKLKSNPDNRDKSQYCLFHRDHGHSTRNCIQLKDEIEALIRNGYLKEFTTKAEADQ
        L K+  ++K+ P  R K QY LFHRDHGH+T++C  LK+E+E LIR+GYLKE+    +A Q
Subjt:  LKKFERKLKSNPDNRDKSQYCLFHRDHGHSTRNCIQLKDEIEALIRNGYLKEFTTKAEADQ

XP_023896290.1 uncharacterized protein LOC112008184 [Quercus suber]1.4e-0941.38Show/hide
Query:  QKYMSAEELLKSKKLERKHKRPSSSDRDSRK-DKKQRTDEGGRGRSDYSRGRPDQGDYLKKFERKLKSNPDNRDKSQYCLFHRDHGHSTRNCIQLKDEIE
        QKYM+AE+ L + + E + +     DR  +K D+  R +  G  R D    R  Q ++  K+ R L S+P  RD+S+YC FH+DHGH T +C  LK++IE
Subjt:  QKYMSAEELLKSKKLERKHKRPSSSDRDSRK-DKKQRTDEGGRGRSDYSRGRPDQGDYLKKFERKLKSNPDNRDKSQYCLFHRDHGHSTRNCIQLKDEIE

Query:  ALIRNGYLKEFTTKAE
         LIR G L++F  K E
Subjt:  ALIRNGYLKEFTTKAE

XP_030931060.1 uncharacterized protein LOC115956938 [Quercus lobata]1.1e-0939.83Show/hide
Query:  QKYMSAEELLKS-KKLERKHKRPSSSD--RDSRKDKKQRTDEGGRGRSDYSRGRPDQGDYLKKFERKLKSNPDNRDKSQYCLFHRDHGHSTRNCIQLKDE
        QKYM+AE+ L + K  ER   +    D  R  ++D+ +R +  G  R D    R  + ++  K+ + L S+P+ RDK++YC FHRDHGH+T +C  LK++
Subjt:  QKYMSAEELLKS-KKLERKHKRPSSSD--RDSRKDKKQRTDEGGRGRSDYSRGRPDQGDYLKKFERKLKSNPDNRDKSQYCLFHRDHGHSTRNCIQLKDE

Query:  IEALIRNGYLKEFTTKAE
        IE LIR G L+++  K E
Subjt:  IEALIRNGYLKEFTTKAE

XP_030936672.1 uncharacterized protein LOC115961916 [Quercus lobata]4.0e-0940.68Show/hide
Query:  QKYMSAEELLKS-KKLERKHKRPSSSD--RDSRKDKKQRTDEGGRGRSDYSRGRPDQGDYLKKFERKLKSNPDNRDKSQYCLFHRDHGHSTRNCIQLKDE
        QKYM+AE+ L + K  ER   +    D  R  ++D+ +R +  G  R D     P Q ++  K+ R L  +P+ RDK++YC FHRDHGH+T++C  LK++
Subjt:  QKYMSAEELLKS-KKLERKHKRPSSSD--RDSRKDKKQRTDEGGRGRSDYSRGRPDQGDYLKKFERKLKSNPDNRDKSQYCLFHRDHGHSTRNCIQLKDE

Query:  IEALIRNGYLKEFTTKAE
        IE LIR G L+++  K E
Subjt:  IEALIRNGYLKEFTTKAE

XP_030963635.1 uncharacterized protein LOC115984764 [Quercus lobata]1.1e-0940.34Show/hide
Query:  QKYMSAEELLKSKKLERKHKRPSSSDRDSRKDKKQRTD----EGGRGRSDYSRGRPDQGDYLKKFERKLKSNPDNRDKSQYCLFHRDHGHSTRNCIQLKD
        QKYM+AE+ L + K   K    ++++ D R  K++R+D    +G R + D S   P   ++  K+ R L S+P+ RDK++YC FH+DHGH+T +C  LK+
Subjt:  QKYMSAEELLKSKKLERKHKRPSSSDRDSRKDKKQRTD----EGGRGRSDYSRGRPDQGDYLKKFERKLKSNPDNRDKSQYCLFHRDHGHSTRNCIQLKD

Query:  EIEALIRNGYLKEFTTKAE
        +IE LIR G L+++  K E
Subjt:  EIEALIRNGYLKEFTTKAE

TrEMBL top hitse value%identityAlignment
A0A2N9ENC6 Ribonuclease H3.3e-0938.35Show/hide
Query:  QKYMSAEELLKSKK--LERKHKRPSSSDRDSRKDKKQRTDEGGRGRSDYSRGRPDQGDYLKKFERKLKSNPDNRDKSQYCLFHRDHGHSTRNCIQLKDEI
        QK+++AE+  +++   L RK K P     DS ++K  R D       ++    PD      K+  KL+S+P  R K  YC FHRDHGH+T +C  LK +I
Subjt:  QKYMSAEELLKSKK--LERKHKRPSSSDRDSRKDKKQRTDEGGRGRSDYSRGRPDQGDYLKKFERKLKSNPDNRDKSQYCLFHRDHGHSTRNCIQLKDEI

Query:  EALIRNGYLKEFTTKAEADQRW-PRPNRDDPGR
        EALIR G L +F  + + + R  PRP R D  +
Subjt:  EALIRNGYLKEFTTKAEADQRW-PRPNRDDPGR

A0A2N9EYJ1 Ribonuclease H1.5e-0939.1Show/hide
Query:  QKYMSAEELLKSKK--LERKHKRPSSSDRDSRKDKKQRTDEGGRGRSDYSRGRPDQGDYLKKFERKLKSNPDNRDKSQYCLFHRDHGHSTRNCIQLKDEI
        QK+++AE+  +++   L RK K P     DS ++K  R D     R  +    PD      K+  KL+S+P  R K  YC FHRDHGH+T +C  LK +I
Subjt:  QKYMSAEELLKSKK--LERKHKRPSSSDRDSRKDKKQRTDEGGRGRSDYSRGRPDQGDYLKKFERKLKSNPDNRDKSQYCLFHRDHGHSTRNCIQLKDEI

Query:  EALIRNGYLKEFTTKAEADQRW-PRPNRDDPGR
        EALIR G L +F  + + + R  PRP R D  +
Subjt:  EALIRNGYLKEFTTKAEADQRW-PRPNRDDPGR

A0A2N9FQ85 Ribonuclease H4.3e-0938.35Show/hide
Query:  QKYMSAEELLKSKK--LERKHKRPSSSDRDSRKDKKQRTDEGGRGRSDYSRGRPDQGDYLKKFERKLKSNPDNRDKSQYCLFHRDHGHSTRNCIQLKDEI
        QK+++AE+  +++   L RK K P     DS ++K  R D       ++    PD      K+  KL+S+P  R K  YC FHRDHGH+T +C  LK +I
Subjt:  QKYMSAEELLKSKK--LERKHKRPSSSDRDSRKDKKQRTDEGGRGRSDYSRGRPDQGDYLKKFERKLKSNPDNRDKSQYCLFHRDHGHSTRNCIQLKDEI

Query:  EALIRNGYLKEFTTKAEADQRW-PRPNRDDPGR
        EALIR G L +F  + + + R  PRP R D  +
Subjt:  EALIRNGYLKEFTTKAEADQRW-PRPNRDDPGR

A0A2N9II83 Ribonuclease H7.3e-0936.96Show/hide
Query:  QKYMSAEELLKSKK--LERKHKRPSSSDRDSRKDKKQRTDEGGRGRSDYSRGRPDQGDYLK-----KFERKLKSNPDNRDKSQYCLFHRDHGHSTRNCIQ
        QK+++AE+  +++   L RK K P     DS ++K          R DY + R ++   ++     K+  KL+S+P  R K  YC FHRDHGH+T +C  
Subjt:  QKYMSAEELLKSKK--LERKHKRPSSSDRDSRKDKKQRTDEGGRGRSDYSRGRPDQGDYLK-----KFERKLKSNPDNRDKSQYCLFHRDHGHSTRNCIQ

Query:  LKDEIEALIRNGYLKEFTTKAEADQRW-PRPNRDDPGR
        LK +IEALIR G L +F  + + + R  PRP R D  +
Subjt:  LKDEIEALIRNGYLKEFTTKAEADQRW-PRPNRDDPGR

A0A2N9J8F1 Ribonuclease H8.7e-1040.6Show/hide
Query:  QKYMSAEELL--KSKKLERKHKRPSSSDRDSRKDKKQRTDEGGRGRSDYSRGRPDQGDYLKKFERKLKSNPDNRDKSQYCLFHRDHGHSTRNCIQLKDEI
        QK+++AE+    + K L RK K P     DS ++K  R D     R + S   PD      K+  KL+S+P  R K  YC FHRDHGH+T +C  LK +I
Subjt:  QKYMSAEELL--KSKKLERKHKRPSSSDRDSRKDKKQRTDEGGRGRSDYSRGRPDQGDYLKKFERKLKSNPDNRDKSQYCLFHRDHGHSTRNCIQLKDEI

Query:  EALIRNGYLKEFTTKAEADQRW-PRPNRDDPGR
        EALIR G L +F  + + + R  PRP R D  +
Subjt:  EALIRNGYLKEFTTKAEADQRW-PRPNRDDPGR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTGTACAAGGAGCTGACGAGGACAACCGGGCGGGGAGAGGACCAGGAGACGACCCAGAGGAAGACCGGACCAACGGGCCGGGCCAACGTGGCCCGATCCGTACGGTC
AGCCTCGGCCTTGGGCCGAGGCCGACCACTCGGCCCGCTCGCGTGGGCCGAGTTCGTTTGCCTCCGCTCGGTCCCTCCTGCTTCTGGTCGCCCCGGTTTCGCCTGGTTTG
TCCCGAAACGCCTCCGAATTCCTAAAAACCCTAAGAGCATGAACAGATATTTATATCCCTCTTCGCCACTGAAGAAGGGGACCCGAACTCTCGACTCTCTCCTCTTACTC
TCTTGCTATCCTCTTCCGTTTTCTGACTTAAGCATCGGAGGCGGTGTGGCTAGCACCACACCAGTGTGCAGTTGGCGGCGTCTGTGGGGAAGAAAGCTTGCCAAATCTGC
ATATCGGTCCCTCATGAGTAAGGGGATGGAGAAGAGAAATCTAGACATAAACACAGAGAATTCGGATGGTGACCGCCACCAGCGGAGGTCACGGGAAGAAGGCCGAGATC
GACCTCGGACCGAATCTTCTCGTCCTCGGTCTCCACTGCCCTCATCCCGAGAGAAGCAAGCTGATCTAAAATTTGCTGCTCTCGAAAACAAAGTAAGTGTGATGGATCAT
AATTTGTCCAGGATACTTCGTATCTTGGATAAACCTGGTCCTAGCACTAAAACCCCTGATGAGAGGCTGGTTAGGGATCCGAGGAAGGGGAAGGAGCCCATGGAGCACAC
TGCAGAATCGGAGACGAGATCGAAGGGAAAGAAGACTAGCAACATGACCAGCAAGATCAGGGGGCTCAAGCCTACTAATCGTACAATCTTGTGGAGCCCAGAGTCAAGCA
CACTTAAGGGACGAGACAACACAGTTTCTACCCCAAGCTATGGTCATACTAAGACCGACCTGAGGACTCTGATCGAGGAGAAGCGCAGAAGTGCCAAAATTGCCGAGTCC
GAGGCCAGAGCTGCCGAAGCTGAAGCCAGGACTGCCGAGGCCAAGAAAGACAATCCCCCTTGGAAGACCGAGCTTCTAAACACACTAAAGGAGCTTGAGAATCCACAGGG
ATACCTGCAGAAGTTAAAGGACTCAGGAGCACAAGACTTGGAAGAATTGATCGACCAAAAATACATGAGTGCAGAGGAGTTGCTCAAATCAAAGAAGTTAGAACGTAAAC
ACAAGAGGCCTTCTTCGTCTGACCGCGACAGTAGGAAGGACAAAAAGCAGCGGACCGACGAGGGAGGCCGAGGCCGATCAGACTATAGCCGAGGCCGACCAGACCAAGGA
GACTACTTGAAGAAGTTTGAAAGGAAGCTGAAGTCCAATCCTGACAACAGAGACAAGAGCCAGTATTGTCTCTTCCATCGAGATCATGGACATTCAACCAGGAACTGCAT
TCAGCTAAAGGACGAGATTGAAGCGCTGATTCGAAACGGATACCTGAAGGAGTTCACCACTAAGGCCGAGGCAGACCAGAGGTGGCCGAGGCCGAATAGAGACGACCCAG
GCCGACCAGAGACGACCCAGGCAAACACAAGGGCTTCCATGCTTAGAGCCCACGCTAATGCACACGAGCCTGGACTACCAAGTCTACCTCACCTCAGAGCCCAAACACTT
CATGTAAGTCAAGCTCACCTGGCAGAGGCCGAAACCGAGCACCTCTTGCCAAAGCCGAGCACCTCTTGCCGAGGCCGAGCACAAACTTTAAAGGATCGTGAGATCTTCCA
TTTTTCCTACATTTTACTTGTGGATAAGCCCTGGATCCGGAATGATGCACTCCGAATGACCAAGTACGGGGGAGATAGCTGTGCTCGGCCTCTTCCCGAGGCCGACCAGC
ACCACTTTTGTAATCCCTCACCTCTTTCATCTCCATTTCACCTAACCCCTATTCAGGGAGTAATTTTGGACCACCATGGTGTACAAGGAGCTGACGAGGACAACCGGGTG
GGGAGAGGACCAGGAGACGACCCAGAGGAAGACTGGACCAACGGGCCGGGCCAACGTGGCCCGTCCCGTACGGTAGGCCCGCTCGCCCAGGCCGAGTTCGTTTTCCTCCG
CTCGGTCCCTCCTGCTTCTGGCCGCCCCGGTTCCGCCTGGTTTGTCCCGAAACGCCTCCGAATTCCTAAAAACCCTGAGAGCATGAGCAAGTATTTATACCCCTCTTCGT
CACTGAAGAAGGGGACCCGAACTCTCGACTCTCTCCTTTTACTCTCTTGCTATCCTCTTCCGTTTTCTGACTTAAGCATCGGAGGCGGTGTGGCTAGCACCACACCGGTG
TGCAGGTTTACTCTTTTGCAGGCCACGTCTTCCCCCGCTCTCAAACAAATTCACTGTCGATTATCACGTGGAGCGAAG
mRNA sequenceShow/hide mRNA sequence
ATGGTGTACAAGGAGCTGACGAGGACAACCGGGCGGGGAGAGGACCAGGAGACGACCCAGAGGAAGACCGGACCAACGGGCCGGGCCAACGTGGCCCGATCCGTACGGTC
AGCCTCGGCCTTGGGCCGAGGCCGACCACTCGGCCCGCTCGCGTGGGCCGAGTTCGTTTGCCTCCGCTCGGTCCCTCCTGCTTCTGGTCGCCCCGGTTTCGCCTGGTTTG
TCCCGAAACGCCTCCGAATTCCTAAAAACCCTAAGAGCATGAACAGATATTTATATCCCTCTTCGCCACTGAAGAAGGGGACCCGAACTCTCGACTCTCTCCTCTTACTC
TCTTGCTATCCTCTTCCGTTTTCTGACTTAAGCATCGGAGGCGGTGTGGCTAGCACCACACCAGTGTGCAGTTGGCGGCGTCTGTGGGGAAGAAAGCTTGCCAAATCTGC
ATATCGGTCCCTCATGAGTAAGGGGATGGAGAAGAGAAATCTAGACATAAACACAGAGAATTCGGATGGTGACCGCCACCAGCGGAGGTCACGGGAAGAAGGCCGAGATC
GACCTCGGACCGAATCTTCTCGTCCTCGGTCTCCACTGCCCTCATCCCGAGAGAAGCAAGCTGATCTAAAATTTGCTGCTCTCGAAAACAAAGTAAGTGTGATGGATCAT
AATTTGTCCAGGATACTTCGTATCTTGGATAAACCTGGTCCTAGCACTAAAACCCCTGATGAGAGGCTGGTTAGGGATCCGAGGAAGGGGAAGGAGCCCATGGAGCACAC
TGCAGAATCGGAGACGAGATCGAAGGGAAAGAAGACTAGCAACATGACCAGCAAGATCAGGGGGCTCAAGCCTACTAATCGTACAATCTTGTGGAGCCCAGAGTCAAGCA
CACTTAAGGGACGAGACAACACAGTTTCTACCCCAAGCTATGGTCATACTAAGACCGACCTGAGGACTCTGATCGAGGAGAAGCGCAGAAGTGCCAAAATTGCCGAGTCC
GAGGCCAGAGCTGCCGAAGCTGAAGCCAGGACTGCCGAGGCCAAGAAAGACAATCCCCCTTGGAAGACCGAGCTTCTAAACACACTAAAGGAGCTTGAGAATCCACAGGG
ATACCTGCAGAAGTTAAAGGACTCAGGAGCACAAGACTTGGAAGAATTGATCGACCAAAAATACATGAGTGCAGAGGAGTTGCTCAAATCAAAGAAGTTAGAACGTAAAC
ACAAGAGGCCTTCTTCGTCTGACCGCGACAGTAGGAAGGACAAAAAGCAGCGGACCGACGAGGGAGGCCGAGGCCGATCAGACTATAGCCGAGGCCGACCAGACCAAGGA
GACTACTTGAAGAAGTTTGAAAGGAAGCTGAAGTCCAATCCTGACAACAGAGACAAGAGCCAGTATTGTCTCTTCCATCGAGATCATGGACATTCAACCAGGAACTGCAT
TCAGCTAAAGGACGAGATTGAAGCGCTGATTCGAAACGGATACCTGAAGGAGTTCACCACTAAGGCCGAGGCAGACCAGAGGTGGCCGAGGCCGAATAGAGACGACCCAG
GCCGACCAGAGACGACCCAGGCAAACACAAGGGCTTCCATGCTTAGAGCCCACGCTAATGCACACGAGCCTGGACTACCAAGTCTACCTCACCTCAGAGCCCAAACACTT
CATGTAAGTCAAGCTCACCTGGCAGAGGCCGAAACCGAGCACCTCTTGCCAAAGCCGAGCACCTCTTGCCGAGGCCGAGCACAAACTTTAAAGGATCGTGAGATCTTCCA
TTTTTCCTACATTTTACTTGTGGATAAGCCCTGGATCCGGAATGATGCACTCCGAATGACCAAGTACGGGGGAGATAGCTGTGCTCGGCCTCTTCCCGAGGCCGACCAGC
ACCACTTTTGTAATCCCTCACCTCTTTCATCTCCATTTCACCTAACCCCTATTCAGGGAGTAATTTTGGACCACCATGGTGTACAAGGAGCTGACGAGGACAACCGGGTG
GGGAGAGGACCAGGAGACGACCCAGAGGAAGACTGGACCAACGGGCCGGGCCAACGTGGCCCGTCCCGTACGGTAGGCCCGCTCGCCCAGGCCGAGTTCGTTTTCCTCCG
CTCGGTCCCTCCTGCTTCTGGCCGCCCCGGTTCCGCCTGGTTTGTCCCGAAACGCCTCCGAATTCCTAAAAACCCTGAGAGCATGAGCAAGTATTTATACCCCTCTTCGT
CACTGAAGAAGGGGACCCGAACTCTCGACTCTCTCCTTTTACTCTCTTGCTATCCTCTTCCGTTTTCTGACTTAAGCATCGGAGGCGGTGTGGCTAGCACCACACCGGTG
TGCAGGTTTACTCTTTTGCAGGCCACGTCTTCCCCCGCTCTCAAACAAATTCACTGTCGATTATCACGTGGAGCGAAG
Protein sequenceShow/hide protein sequence
MVYKELTRTTGRGEDQETTQRKTGPTGRANVARSVRSASALGRGRPLGPLAWAEFVCLRSVPPASGRPGFAWFVPKRLRIPKNPKSMNRYLYPSSPLKKGTRTLDSLLLL
SCYPLPFSDLSIGGGVASTTPVCSWRRLWGRKLAKSAYRSLMSKGMEKRNLDINTENSDGDRHQRRSREEGRDRPRTESSRPRSPLPSSREKQADLKFAALENKVSVMDH
NLSRILRILDKPGPSTKTPDERLVRDPRKGKEPMEHTAESETRSKGKKTSNMTSKIRGLKPTNRTILWSPESSTLKGRDNTVSTPSYGHTKTDLRTLIEEKRRSAKIAES
EARAAEAEARTAEAKKDNPPWKTELLNTLKELENPQGYLQKLKDSGAQDLEELIDQKYMSAEELLKSKKLERKHKRPSSSDRDSRKDKKQRTDEGGRGRSDYSRGRPDQG
DYLKKFERKLKSNPDNRDKSQYCLFHRDHGHSTRNCIQLKDEIEALIRNGYLKEFTTKAEADQRWPRPNRDDPGRPETTQANTRASMLRAHANAHEPGLPSLPHLRAQTL
HVSQAHLAEAETEHLLPKPSTSCRGRAQTLKDREIFHFSYILLVDKPWIRNDALRMTKYGGDSCARPLPEADQHHFCNPSPLSSPFHLTPIQGVILDHHGVQGADEDNRV
GRGPGDDPEEDWTNGPGQRGPSRTVGPLAQAEFVFLRSVPPASGRPGSAWFVPKRLRIPKNPESMSKYLYPSSSLKKGTRTLDSLLLLSCYPLPFSDLSIGGGVASTTPV
CRFTLLQATSSPALKQIHCRLSRGAK